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Alim, Mohammad Abdul, Kupz, Andreas, Sikder, Suchandan, Rush, Catherine, Govan, Brenda, and Ketheesan, Natkunam (2020) Increased susceptibility to Mycobacterium tuberculosis infection in a diet-induced murine model of type 2 diabetes. Microbes and Infection, 22 (8). pp. 303-311.

Andreosso, Athena (2019) Molecular and structural insights into Chironex fleckeri venom. PhD thesis, James Cook University.

Aguilar, Catalina, Raina, Jean-Baptiste, Fôret, Sylvain, Hayward, David C., Lapeyre, Bruno, Bourne, David G., and Miller, David J. (2019) Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress. BMC Genomics, 20. 148.

Appelhans, Marc S., Wen, Jun, Duretto, Marco, Crayn, Darren, and Wagner, Warren L. (2018) Historical biogeography of Melicope (Rutaceae) and its close relatives with a special emphasis on Pacific dispersals. Journal of Systematics and Evolution, 56 (6). pp. 576-599.

Andrade Rodríguez, Natalia Alexandra (2018) Non-contact competition between soft and hard corals: a transcriptomic perspective. PhD thesis, James Cook University.

Andreosso, Athena, Bansal, Paramjit S., Smout, Michael J., Wilson, David, Seymour, Jamie E., and Daly, Norelle L. (2018) Structural characterisation of predicted helical regions in the Chironex fleckeri CfTX-1 toxin. Marine Drugs, 16 (6). 201. pp. 1-12.

Allen-Ankins, Slade, and Stoffels, Rick J. (2017) Contrasting fundamental and realized niches: two fishes with similar thermal performance curves occupy different thermal habitats. Freshwater science, 36 (3). pp. 635-652.

Allan, Bridie J.M., Domenici, Paolo, Watson, Sue Ann, Munday, Philip L., and McCormick, Mark I. (2017) Warming has a greater effect than elevated CO2 on predator prey interactions in coral reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1857). 20171784. pp. 1-9.

Allen, Jonathan D., Schrage, Kharis R., Foo, Shawna A., Watson, Sue-Ann, and Byrne, Maria (2017) The effects of salinity and pH on fertilization, early development and hatching in the Crown-of-Thorns seastar. Diversity, 9 (1). 13. pp. 1-14.

Allen, Craig R., Angeler, David G., Cumming, Graeme S., Folke, Carl, Twidwell, Dirac, and Uden, Daniel R. (2016) Quantifying spatial resilience. Journal of Applied Ecology, 53 (3). pp. 625-635.

Adjeroud, Mehdi, Wallace, Carden C., Bosserelle, Pauline, Payri, Claude, Menou, Jean-Louis, and Pichon, Michel (2016) Reefs at the edge: coral community structure around Rapa, southernmost French Polynesia. Marine Ecology, 37 (3). pp. 565-575.

Andrews, Allen H., Demartini, Eward E., Eble, Jeff A., Taylor, Brett M., Lou, Dong Chun, and Humphreys, Robert L. (2016) Age and growth of bluespine unicornfish (Naso unicornis): a half-century life-span for a keystone browser, with a novel approach to bomb radiocarbon dating in the Hawaiian Islands. Canadian Journal of Fisheries and Aquatic Sciences, 73 (10). pp. 1575-1586.

Andreakis, Nikolaos, Costello, Paul, Zanolla, Marianela, Saunders, Gary W., and Mata, Leonardo (2016) Endemic or introduced? Phylogeography of Asparagopsis (Florideophyceae) in Australia reveals multiple introductions and a new mitochondrial lineage. Journal of Phycology, 52 (1). pp. 141-147.

Asfiya, Wara, Yeeles, Peter, Lach, Lori, Majer, Jonathan D., Heterick, Brian, and Didham, Raphael K. (2016) Abiotic factors affecting the foraging activity and potential displacement of native ants by the invasive African big-headed ant Pheidole megacephala (Fabricius, 1793) (Hymenoptera: Formicidae). Myrmecological News, 22. pp. 43-54.

Andrewartha, Sarah J., Munns, Suzanne L., and Edwards, Ashley (2016) Calibration of the HemoCue point-of-care analyser for determining haemoglobin concentration in a lizard and a fish. Conservation Physiology, 4 (1). cow006. pp. 1-6.

Albright, Rebecca, Anthony, Kenneth R.N., Baird, Mark, Beeden, Roger, Byrne, Maria, Collier, Catherine, Dove, Sophie, Fabricius, Katharina, Hoegh-Guldberg, Ove, Kelly, Ryan P., Lough, Janice, Mongin, Mathieu, Munday, Philip L., Pears, Rachel J., Russell, Bayden D., Tilbrook, Bronte, and Abal, Eva (2016) Ocean acidification: linking science to management solutions using the Great Barrier Reef as a case study. Journal of Environmental Management, 182. pp. 641-650.

Ament, Judith M., and Cumming, Graeme S. (2016) Scale dependency in effectiveness, isolation, and social-ecological spillover of protected areas. Conservation Biology, 30 (4). pp. 846-855.

Arrigoni, Roberto, Berumen, Michael L., Chen, Chaolun Allen, Terraneo, Tullia I., Baird, Andrew H., Payri, Claude, and Benzoni, Francesca (2016) Species delimitation in the reef coral genera Echinophyllia and Oxypora (Scleractinia, Lobophylliidae) with a description of two new species. Molecular Phylogenetics and Evolution, 105. pp. 146-159.

Aguilar Hurtado, Catalina (2016) Transcriptomic analyses of the responses of corals to environmental stress. PhD thesis, James Cook University.

Andreakis, Nikolaos, Høj, Lone, Kearns, Therese, Hall, Michael R, Ericson, Gavin, Cobb, Rose E., Gordon, Benjamin R., and Evans-Illidge, Elizabeth (2015) Diversity of marine-derived fungal cultures exposed by DNA barcodes: the algorithm matters. PLoS ONE, 10 (8). e0136130..

Anderson, Kristen D., Heron, Scott F., and Pratchett, Morgan S. (2015) Species-specific declines in the linear extension of branching corals at a subtropical reef, Lord Howe Island. Coral Reefs, 34 (2). pp. 479-490.

Adlard, Robert D., Miller, Terrence L., and Smit, Nico J. (2015) The butterfly effect: parasite diversity, environment, and emerging disease in aquatic wildlife. Trends in Parasitology, 31 (4). pp. 160-166.

Allan, Bridie J.M., Domenici, Paolo, Munday, Philip L., and McCormick, Mark I. (2015) Feeling the heat: the effect of acute temperature changes on predator–prey interactions in coral reef fish. Conservation Physiology, 3 (1). cov011. pp. 1-8.

Atherton, Jennifer Ann, and McCormick, Mark Ian (2015) Active in the sac: damselfish embryos use innate recognition of odours to learn predation risk before hatching. Animal Behaviour, 103. pp. 1-6.

Anderson, Alexander S., Marques, Tiago A., Shoo, Luke P., and Williams, Stephen E. (2015) Detectability in audio-visual surveys of tropical rainforest birds: the influence of species, weather and habitat characteristics. PLoS ONE, 10 (6). e0128464. pp. 1-24.

Alajmi, Fahad F. (2015) Developing intensive culture techniques for the tropical copepod Parvocalanus crassirostris as a live feed for aquaculture. PhD thesis, James Cook University.

Allcock, A. Louise, Lindgren, A., and Strugnell, J.M. (2015) The contribution of molecular data to our understanding of cephalopod evolution and systematics: a review. Journal of Natural History, 49 (21-24). pp. 1373-1421.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Abdo, David, Webster, Nicole, and Whalan, Steve (2014) The influence of habitat on post-settlement processes, larval production and recruitment in a common coral reef sponge. Journal of Experimental Marine Biology and Ecology, 461. pp. 162-172.

Abdul Wahab, M., De Nys, R., Webster, N., and Whalan, S. (2014) Phenology of sexual reproduction in the common coral reef sponge, Carteriospongia foliascens. Coral Reefs, 33 (2). pp. 381-394.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Webster, Nicole, and Whalan, Steve (2014) Larval behaviours and their contribution to the distribution of the intertidal coral reef sponge Carteriospongia foliascens. PLoS ONE, 9 (5). e98181. pp. 1-13.

Aschard, Hugues, Vilhjálmsson , Bjarni J., Greliche, Nicolas, Morange, Pierre-Emmanuel, Trégouët, David-Alexandre, and Kraft, Peter (2014) Maximizing the power of principal-component analysis of correlated phenotypes in genome-wide association studies. American Journal of Human Genetics, 94 (5). pp. 662-676.

Abdul Wahab, Muhammad, Fromont, J., Whalan, S., Webster, N., and Andreakis, N. (2014) Combining morphometrics with molecular taxonomy: how different are similar foliose keratose sponges from the Australian tropics? Molecular Phylogenetics and Evolution, 73. pp. 23-39.

Allan, Bridie J.M., Miller, Gabrielle M., McCormick, Mark I., Domenici, Paolo, and Munday, Philip L. (2014) Parental effects improve escape performance of juvenile reef fish in a high-CO(2) world. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1777). 20132179. pp. 1-7.

Albouy, Camille, Velez, Laure, Coll, Marta, Colloca, Francesco, Le Loc'h, François, Mouillot, David, and Gravel, Dominique (2014) From projected species distribution to food-web structure under climate change. Global Change Biology, 20 (3). pp. 730-741.

Anderson, Ryan C., and Surbey, Michele K. (2014) I want what she's having: evidence of human mate copying. Human Nature, 25 (3). pp. 342-358.

Anderson, Kristen D., and Pratchett, Morgan S. (2014) Variation in size-frequency distributions of branching corals between a tropical versus sub-tropical reef. Marine Ecology Progress Series, 502. pp. 117-128.

Abdul Wahab, Muhammad Azmi (2014) A holistic approach towards understanding population dynamics of a coral reef sponge. PhD thesis, James Cook University.

Anderson, Alexander S., Storlie, Collin J., Shoo, Luke P., Pearson, Richard G., and Williams, Stephen E. (2013) Current analogues of future climate indicate the likely response of a sensitive montane tropical avifauna to a warming world. PLoS ONE, 8 (7). e69393. pp. 1-13.

Abbott, Iain, Cerqueira, Gustavo M., Bhuiyan, Saruar, and Peleg, Anton Y. (2013) Carbapenem resistance in Acinetobacter baumannii: laboratory challenges, mechanistic insights and therapeutic strategies. Expert Review of Anti-infective Therapy, 11 (4). pp. 395-409.

Allan, Bridie J.M., Domenici, Paolo, McCormick, Mark I., Watson, Sue-Ann, and Munday, Philip L. (2013) Elevated CO2 affects predator-prey interactions through altered performance. PLoS One, 8 (3). e58520. pp. 1-7.

Akinci, Ersin, Banga, Anannya, Tungatt, Katie, Segal, Joanna, Eberhard, Daniel, Dutton, James R., and Slack, Jonathan M.W. (2013) Reprogramming of various cell types to a beta-like state by Pdx1, Ngn3 and MafA. PLoS ONE, 8 (11). e82424.

Aland, Kieran V., and Hoskin, Conrad J. (2013) The advertisement call and clutch size of the Golden-capped Boulder-frog Cophixalus pakayakulangun (Anura: Microhylidae). Zootaxa, 3718 (3). pp. 299-300.

Anstey-Gilbert, Christopher S., Hemsworth, Glyn R., Flemming, Claudia S., Hodskinson, Michael R., Zhang, Jing, Sedelnikova, Svetlana E., Stillman, Timothy J., Sayers, Jon R., and Artymiuk, Peter J. (2013) The structure of Escherichia coli ExoIX: implications for DNA binding and catalysis in flap endonucleases. Nucleic Acids Research, 41 (17). pp. 8357-8367.

Ahmed, Faruq, Li, Yan, and Schenk, Peer M. (2012) Algal biorefinery: sustainable production of biofuels and aquaculture feed? In: Gordon, Richard, and Seckbach, Joseph, (eds.) The Science of Algal Fuels: phycology, geology, biophotonics, genomics and nanotechnology. Cellular Origin, Life in Extreme Habitats and Astrobiology, 25 . Springer, Dordrecht, the Netherlands, pp. 21-41.

Abell-Davis, Sandra E., Gadek, Paul A., Pearce, Ceridwen A., and Congdon, Brad C. (2012) Allocasuarina tree hosts determine the spatial distribution of hypogeous fungal sporocarps in three tropical Australian sclerophyll forests. Mycologia, 104 (5). pp. 1008-1019.

Adarme-Vega, T. Catalina, Lim, David K.Y., Timmins, Matthew, Vernen, Felicitas, Li, Yan, and Schenk, Peer M. (2012) Microalgal biofactories: a promising approach towards sustainable omega-3 fatty acid production. Microbial Cell Factories, 11 (July). 96. pp. 1-10.

Allen-Ankins, S., Stoffels, R. J., Pridmore, P. A., and Vogel, M. T. (2012) The effects of turbidity, prey density and environmental complexity on the feeding of juvenile Murray cod Maccullochella peelii. Journal of Fish Biology, 80 (1). pp. 195-206.

Appleby, Sarah L., Cockshell, Michaelia P., Pippal, Jyotsna B., Thompson, Emma J., Barrett, Jeffrey M., Tooley, Katie, Sen, Shaundeep, Sun, Wai Yan, Grose, Randall, Nicholson, Ian, Levina, Vitalina, Cooke, Ira, Talbo, Gert, Lopez, Angel F., and Bonder, Claudine S. (2012) Characterization of a distinct population of circulating human non-adherent endothelial forming cells and their recruitment via intercellular adhesion molecule-3. PLoS ONE, 7 (11). e46996.

Andreakis, Nikos, Luter, Heidi M., and Webster, Nicole S. (2012) Cryptic speciation and phylogeographic relationships in the elephant ear sponge Ianthella basta (Porifera, Ianthellidae) from northern Australia. Zoological Journal of the Linnean Society, 166 (2). pp. 225-235.

Attenborough, Rosalind M.F., Hayward, David C., V. Kitahara, Marcelo, Miller, David J., and Ball, Eldon E. (2012) A "neural" enzyme in nonbilaterian animals and algae: preneural origins for peptidylglycine α-amidating monooxygenase. Molecular Biology and Evolution, 29 (10). pp. 3095-3109.

Askin, Samuel P., and Schaeffer, Patrick M. (2012) A universal immuno-PCR platform for comparative and ultrasensitive quantification of dual affinity-tagged proteins in complex matrices. Analyst, 137 (22). pp. 5193-5196.

Allen, Craig, Cumming, Graeme S., Garmestani, Ahjond S., Taylor, Phllip D., and Walker, Brian H. (2011) Managing for resilience. Wildlife Biology, 17 (4). pp. 337-349.

Astley, Holly M., Parsley, Kate, Aubry, Sylvain, Chastain, Chris J., Burnell, Jim N., Webb, Michael E., and Hibberd, Julian M. (2011) The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis are both bifunctional and interact with the catalytic and nucleotide-binding domains of pyruvate, orthophosphate dikinase. The Plant Journal, 68 (6). pp. 1070-1080.

Abdul Wahab, M.A., De Nys, R., and Whalan, S. (2011) Larval behaviour and settlement cues of a brooding coral reef sponge. Coral Reefs, 30 (2). pp. 451-460.

Abbott, Patrick, Abe, Jun, Alcock, John, Alizon, Samuel, Alpedrinha, Joao A.C., Andersson, Malte, Andre, Jean-Baptise, van Baalen, Minus, Balloux, Francois, Balshine, Sigal, Barton, Nick, Beukeboom, Leo W., Biernaskie, Jay M, Bilde, Trine, Borga, Gerald, Breed, Michael, Brown, Sam, Bshary, Redouan, Bucking, Angus, Burley, Nancy T., Burton-Chellew, Max N., Cant, Michael A., Chapuisat, Michel, Charnov, Eric L, Clutton-Brock, Tim, Cockburn, Andrew, Cole, Blaine J., Colegrave, Nick, Cosmedis, Leda, Couzin, Iain D., Coyne, Jerry A., Creel, Scott, Crespi, Bermard, Curry, Robert L., Dall, Sasha R. X., Day, Troy, Dickson , Janis L., Dugatkin, Lee Alan, El Mouden, Claire , Emlen , Stephen T., Evans, Jay, Ferriere, Regos, Field, Jeremy, Foitzik, Susanne, Foster, Kevin, Foster , William A., Fox, Charles W., Gadau, Juergen, Gandon, Sylvain, Gardner , Andy, Gardiner, Michael G., Getty, Thamas, Goodisman, Michael A. D., Grafen, Alan, Grosberg, Rick, Grozinger, Christina M., Gouyon, Pierre-Henri, Gwynne, Darryl, Harvey, Paul H., Hatchwell, Ben J., Heinze, Jürgen, Helantera, Heikki, Helms, Ken R, Hill, Kim, Jirincy , Natalie, Johnstone, Rufus A., Kacelnik, Alex, Kiers, E.Toby, Kokko, Hanna, Komdeur, Jan, Korb, Judith, Kronauer, Daniel, Kümmerli, Rolf, Lehmann, Laurent, Linksvayer, Timothy A., Lion, Sébastien, Lyon, Bruce, Marshall , James A.R., McElreath, Richard, Michalakis, Yannis, Michod, Richard E., Mock, Douglas, Monnin, Thibaud, Montgomerie, Robert, Moore, Allen J., Mueller, Ulrich G., Noë, Ronald, Okasha, Samir, Pamilo, Pekka, Parker , Geoff A., Pedersen, Jes S., Pen, Ido, Pfennig, David, Queller, David C., Rankin, Daniel J., Reece, Sarah E., Reeve, Hudson K., Reuter, Max, Roberts, Gilbert, Robson, Simon K.A., Roze, Denis, Rousset, Francois, Rueppell, Olav, Sachs, Joel L., Santorelli, Lorenzo, Schmid-Hempel, Paul, Schwarz, Michael P., Scott-Phillips, Tom, Shellmann-Sherman, Janet, Sherman, Paul W., Shuker, David M., Smith, Jeff, Spagna, Joseph C., Strassmann, Beverly, Suarez, Andrew V., Sandström, Liselotte, Taborsky, Michael, Taylor, Peter, Thompson, Graham, Tooby, John, Tsutsui, Neil D., Tsuji, Kazuki, Turillazzi, Stefano, Úbeda, Francisco, Vargo, Edward L., Voelkl, Bernard, Wenseleers, Tom, West, Stuart A., West-Eberhard, Mary Jane, Westneat, David F., Wiernasz, Diane C., Wild, Geoff, Wramgham, Richard, Young, Andrew J., Zeh, David W., Zeh, Jeanne A., and Zink, Andrew (2011) Inclusive fitness theory and eusociality. Nature, 471 (7339). pp. 1-4.

Aeby, Greta S., Williams, Gareth J., Franklin, Erik C., Haapkyla, Jessica, Harvell, C. Drew, Neale, Stephen, Page, Cathie A., Raymundo, Laurie, Vargas-Ángel, Bernardo, Willis, Bette L., Work, Thierry M., and Davy, Simon K. (2011) Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific. PLoS ONE, 6 (2). e16887. pp. 1-9.

Anderson, Alexander Sibthorpe (2011) Influences of past, present and future climate on the structure and diversity of rainforest bird assemblages in north-eastern Australia. PhD thesis, James Cook University.

Aldred, Nick, Scardino, Andrew, Cavaco, Andreia, de Nys, Rocky, and Clare, Anthony S. (2010) Attachment strength is a key factor in the selection of surfaces by barnacle cyprids (Balanus amphitrite) during settlement. Biofouling, 26 (3). pp. 287-299.

Andrés, Mireia, Rotllant, Guiomar, and Zeng, Chaoshu (2010) Survival, development and growth of larvae of the blue swimmer crab, Portunus pelagicus, cultured under different photoperiod conditions. Aquaculture, 300 (1-4). pp. 218-222.

Ardiwijaya, Rizya, Baird, Andrew, Kartawijaya, Tasrif, and Campbell, Stuart (2010) Changes in reef fish biomass in Karimunjawa National Park: a test of the effectiveness of government gazetted marine parks in Indonesia. In: Proceedings of the 11th International Coral Reef Symposium. pp. 1064-1068. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Aristophanous, Marios (2010) Does your preservative preserve? A comparison of the efficacy of some pitfall trap solutions in preserving the internal reproductive organs of dung beetles. ZooKeys, 34 (Special). pp. 1-16.

Aviat, Florence, Slamti, Leyla, Cerqueira, Gustavo M., Lourdault, Kristel, and Picardeau, Mathieu (2010) Expanding the genetic toolbox for Leptospira species by generation of fluorescent bacteria. Applied and Environmental Microbiology, 76 (24). pp. 8135-8142.

Abrego, David A., van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Onset of algal endosymbiont specificity varies among closely related species of Acropora corals during early ontogeny. Molecular Ecology, 18 (16). pp. 3532-3543.

Anthony, Kenneth R.N., Hoogenboom, Mia O., Maynard, Jeffrey A., Grottoli, Andréa G., and Middlebrook, Rachael (2009) Energetics approach to predicting mortality risk from environmental stress: a case study of coral bleaching. Functional Ecology, 23 (3). pp. 539-550.

Allan, K., Boyero, L., and Pearson, R.G. (2009) Chemical communication in competitive interactions among tropical stream detritivores. Tropical Zoology, 22 (2). pp. 195-204.

Abrego, David, van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Highly infectious symbiont dominates initial uptake in coral juveniles. Molecular Ecology, 18. pp. 3518-3531.

Abrego, David, Ulstrup, Karin E., Willis, Bette L., and van Oppen, Madeleine J.H. (2008) Species-specific interactions between algal endosymbionts and coral hosts define their bleaching response to heat and light stress. Proceedings of the Royal Society of London Series B, Biological Sciences, 275 (1648). pp. 2273-2282.

Arthur, Karen E., Boyle, Michelle C., and Limpus, Colin J. (2008) Ontogenetic changes in diet and habitat use in green sea turtle (Chelonia mydas) life history. Marine Ecology Progress Series, 362. pp. 303-311.

Ainsworth, T.D., Fine, M., Roff, G., and Hoegh-Guldberg, O. (2008) Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica. ISME Journal: multidisciplinary journal of microbial ecology, 4 (2). pp. 67-73.

Anthony, Shelley L., and Thomas, Séverine (2008) Coral Husbandry and Long-Term Coral Survival in the Coral Reef Exhibit at Reef HQ Aquarium, Townsville, Australia. Report. Burgers' Zoo, Arnhem, Netherlands.

Anthony, S.L., Page, C.A., Bourne, D.G., and Willis, B.L. (2008) Newly characterized distinct phases of the coral disease 'atramentous necrosis' on the Great Barrier Reef. Diseases of Aquatic Organisms, 81 (3). pp. 255-259.

Abrego, David (2008) Temporal and environmental influences on the early establishment and maintenance of coral-symbiodinium symbioses. PhD thesis, James Cook University.

Arvedlund, M., Munday, P.L., and Takemura, A. (2007) The morphology and ultrastructure of the peripheral olfactory organ in newly metamorphosed coral-dwelling gobies, Paragobiodon xanthosomus Bleeker (Gobiidae, Teleostei). Tissue and Cell, 39 (5). pp. 335-342.

Arthofer, Wolfgang, Schlick-Steiner, Birgit C., Steiner, Florian M., Avtzis, Dimitrios N., Crozier, Ross H., and Stauffer, Christian (2007) Lessons from a beetle and an ant: coping with taxon-dependent differences in microsatellite development success. Journal of Molecular Evolution, 65 (3). pp. 304-307.

Andrewartha, S.J., Munns, S.L., and Frappell, P.B. (2007) Cardiovascular responses to temperature and their effect on oxygen delivery in reptiles. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 148 (Supple). s4-s6.

Atkinson, Lynn, Adams, Eldridge S., and Crozier, Ross H. (2007) Microsatellite markers for the polygamous termite Nasutitermes corniger (Isoptera: Termitidae). Molecular Ecology Notes, 7 (2). pp. 299-301.

Axelsson, M., Dang, Q., Pitsillides, K., Munns, S., Hicks, J., and Kassab, G.S. (2007) A novel, fully implantable, multichannel biotelemetry system for measurement of blood flow, pressure, ECG, and temperature. Journal of Applied Physiology, 102 (3). pp. 1220-1228.

Ainsworth, T.D., Kramasky-Winter, E., Loya, Y., Hoegh-Guldberg, O., and Fine, M. (2007) Coral disease diagnostics: what's between a plague and a band? Applied and Environmental Microbiology, 73 (3). pp. 981-992.

Ainsworth, T.D., Kvennefors, E., Blackall, L.L., Fine, M., and Hoegh-Guldberg, O. (2007) Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef. Marine Biology, 151. pp. 19-29.

Anderson, Kylie L., Sallam, Mohamed, and Congdon, Bradley C. (2007) Long distance dispersal by Eumetopina flavipes (Hemiptera: Delphacidae), vector of Ramu stunt: is culture contributing? In: Proceedings of the 2007 Conference Australian Society of Sugar Cane Technologists (29) pp. 226-234. From: 29th Conference of the Australian Society of Sugar Cane Technologists, 8-11 May 2007, Cairns, Queensland.

Archard, Gabrielle A., Robertson, Raleigh J., Jones, David, Painter, Jodie, Crozier, Ross, and Clarke, Michael F. (2006) Brooding behaviour in the cooperatively breeding Bell Miner (Manorina melanophrys). Emu: austral ornithology, 106 (2). pp. 105-112.

Almany, Glenn R., and Webster, Michael S. (2006) The predation gauntlet: early post-settlement mortality in reef fishes. Coral Reefs, 25 (1). pp. 19-22.

Allen, James A., and Duke, Norman C. (2006) Large-leafed mangrove: Bruguiera gymnorrhiza. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-15.

Adger, W. Neil, Hughes, Terry P., Folke, Carl, Carpenter, Stephen R., and Rockström, Johan (2005) Social-ecological resilience to coastal disasters. Science, 309 (5737). pp. 1036-1039.

Abu-Daya, Anita, Steer, Wendy M., Trollope, Alexandra F., Friedeberg, Christine E., Patient, Roger K., Thorne, Alan W., and Guille, Matthew J. (2005) Zygotic nucleosome assembly protein-like 1 has a specific, non-cell autonomous role in hematopoiesis. Blood, 106 (2). pp. 514-520.

Anthony, Kenneth R. N., and Connolly, Sean R. (2004) Environmental limits to growth: physiological niche boundaries of corals along turbidity - light gradients. Oecologia, 141 (3). pp. 373-384.

Anderson, Kylie L., Seymour, Jamie E., and Rowe, Richard (2003) Influence of a dorsal trash-package on interactions between larvae of Mallada signata (Schneider) (Neuroptera: Chrysopidae). Australian Journal of Entomology, 42 (4). pp. 363-366.

Ackerman, John L., and Bellwood, David R. (2003) The contribution of small individuals to density-body size relationships. Oecologia, 136 (1). pp. 137-140.

Anthony, K.R.N., and Hoegh-Guldberg, O. (2003) Variation in coral photosynthesis, respiration and growth characteristics in contrasting light microhabitats: an analogue to plants in forest gaps and understoreys? Functional Ecology, 17 (2). pp. 246-259.

Anthony, Kenneth R.N., and Hoegh-Guldberg, Ove (2003) Kinetics of photoacclimation in corals. Oecologia, 134 (1). pp. 23-31.

Arango, Claudia P. (2003) Molecular approach to the phylogenetics of sea spiders (Arthropoda: Pycnogonida) using partial sequences of nuclear ribosomal DNA*1. Molecular Phylogenetics and Evolution, 28 (3). pp. 588-600.

Arango, C.P., and Brodie, G.D. (2003) Observations of predation on the tropical Nudibranch Okenia sp. by sea spider Anoplodactylus longiceps Williams (Arthropoda: Pycnogonida). The Veliger, 46 (1). pp. 99-101.

Arango, Claudia P. (2003) Sea spiders (Pycnogonida, Arthropoda) from the Great Barrier Reef, Australia: new species, new records and ecological annotations. Journal of Natural History, 37 (22). pp. 2723-2772.

Anthony, P.A., Holtum, J.A.M., and Jackes, B.R. (2002) Shade acclimation of rainforest leaves to colonization by lichens. Functional Ecology, 16 (6). pp. 808-816.

Ackerman, J.L., and Bellwood, D.R. (2002) Comparative efficiency of clove oil and rotenone for sampling tropical reef fish assemblages. Journal of Fish Biology, 60 (4). pp. 893-901.

Agatsuma, T., Iwagami, M., Liu, C.X., Rajapakse, R.P.V.J., Mondal, M.M.H., Kitikoon, V., Ambu, S., Agatsuma, Y., Blair, D., and Higuchi, T. (2002) Affinities between asian non-human Schistosoma species, the S. indicum group, and the african human schistosomes. Journal of Helminthology, 76 (1). pp. 7-19.

Anthony, K.R.N., and Larcombe, P. (2002) Coral reefs in turbid waters: sediment-induced stresses in corals and likely mechanisms of adaptation. In: Moosa, M. Kasim, Soemodihardjo, Subagjo, Soegiarto, Aprilani, Romimohtarto, Kasijan, Nontji, Anugerah, Soekarno, , and Suharsono, , (eds.) Procedings of the 9th International Coral Reef Symposium. Ministery of Environment, Indonesian Institute of Sciences and International Society for Reef Studies, Bali, Indonesia, pp. 239-244.

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Brandl, Simon J., and Bellwood, David R. (2014) Individual-based analyses reveal limited functional overlap in a coral reef fish community. Journal of Animal Ecology, 83 (3). pp. 661-670.

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Baker, Ronald, Buckland, Amanda, and Sheaves, Marcus (2014) Fish gut content analysis: robust measures of diet composition. Fish and Fisheries, 15 (1). pp. 170-177.

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Bandaranaike, Suniti, and Willision, John (2014) Boosting graduate employability: bridging the cognitive and affective domains. In: Proceedings of the 2014 Australian Collaborative Education Network National Conference. pp. 205-2011. From: ACEN 2014: Australian Collaborative Education Network National Conference: work integrated learning: building capacity, 1-3 October 2014, Tweed Heads, NSW, Australia.

Burge, Colleen A., Eakin, C. Mark, Friedman, Carolyn S., Froelich, Brett, Hershberger, Paul K., Hofmann, Eileen E., Petes, Laura E., Prager, Katherine C., Weil, Ernesto, Willis, Bette, Ford, Susan E., and Harvell, C. Drew (2014) Climate change influences on marine infectious diseases: implications for management and society. Annual Review of Marine Science, 6. pp. 249-277.

Bloomfield, K.J., Domingues, T.F., Saiz, G., Bird, M.I., Crayn, D.M., Ford, A., Metcalfe, D.J., Farquhar, G.D., and Lloyd, Jon (2014) Contrasting photosynthetic characteristics of forest vs. savanna species (far north Queensland, Australia). Biogeosciences Discussions, 11. pp. 7331-7347.

Butler, James R.A., Linnell, John D.C., Morrant, Damian, Athreya, Vidya, Lescureux, Nicholas, and McKeown, Adam (2014) Dog eat dog, cat eat dog: social-ecological dimensions of dog predation by wild carnivores. In: Gompper, Matthew E., (ed.) Free-Ranging Dogs and Wildlife Conservation. Oxford University Press, Oxford, UK, pp. 117-143.

Bellwood, D.R., Goatley, C.H.R., Brandl, S.J., and Bellwood, O. (2014) Fifty million years of herbivory on coral reefs: fossils, fish and functional innovations. Proceedings of the Royal Society of London Series B, Biological Sciences, 281. 20133046. pp. 1-8.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2014) Habitat degradation modifies the strength of interspecific competition in coral dwelling damselfishes. Ecology, 95 (11). pp. 3056-3067.

Blasdell, Kim R., Widen, Steven G., Diviney, Sinéad M., Firth, Cadhla, Wood, Thomas G., Guzman, Hilda, Holmes, Edward C., Tesh, Robert B., Vasilakis, Nikos, and Walker, Peter J. (2014) Koolpinyah and Yata viruses: two newly recognised ephemeroviruses from tropical regions of Australia and Africa. Veterinary Microbiology, 174 (3-4). pp. 547-553.

Bègue, Jean-François, Sanchez, Mickaël, Micheneau, Claire, and Fournel, Jacques (2014) New record of day geckos feeding on orchid nectar in Reunion Island: can lizards pollinate orchid species? Herpetology Notes, 7. pp. 689-692.

Buchwalder, Katja, Samain, Marie-Stéphanie, Sankowsky, Garry, Neinhuis, Christoph, and Wanke, Stefan (2014) Nomenclatural updates of Aristolochia subgenus Pararistolochia (Aristolochiaceae). Australian Systematic Botany, 27 (1). pp. 48-55.

Bauman, Andrew G., Baird, Andrew H., Burt, John A., Pratchett, Morgan S., and Feary, David A. (2014) Patterns of coral settlement in an extreme environment: the southern Persian Gulf (Dubai, United Arab Emirates). Marine Ecology Progress Series, 499. pp. 115-126.

Bosiger, Yoland J., and McCormick, Mark I. (2014) Temporal links in daily activity patterns between coral reef predators and their prey. PLoS ONE, 9 (10). e111723. pp. 1-11.

Brown, Simon, Muhamad, Noorzaid, Walker, Lisa R., Pedley, Kevin C., and Simcock, David C. (2014) An in silico analysis of the glutamate dehydrogenases of Teladorsagia circumcincta and Haemonchus contortus. Journal of Bioscience and Biotechnology, 3 (1). pp. 49-60.

Brown, Simon, Muhamad, Noorzaid, Pedley, Kevin C., and Simcock, David C. (2014) The kinetics of enzyme mixtures. Molecular Biology Research Communications, 3 (1). pp. 19-30.

Bellwood, David R., and Pratchett, Morgan S. (2014) The origins and diversification of coral reef butterflyfishes. In: Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 1-18.

Barnett, Leonie J., Miller, Terrence L., and Cribb, Thomas H. (2014) A review of the currently recognised opecoelid cercariae, including the identification and emergence ecology of Cercaria capricornia XII (Digenea: Opecoelidae) from Nassarius olivaceus (Gastropoda: Nassariidae) in Central Queensland, Australia. Parasitology International, 63 (5). pp. 670-682.

Barral, Abel, Gomez, Bernard, Feild, Taylor S., Coiffard, Clément, and Daviero-Gomez, Véronique (2013) Leaf architecture and ecophysiology of an early basal eudicot from the Early Cretaceous of Spain. Botanical Journal of the Linnean Society, 173 (4). pp. 594-605.

Bateman, Brooke L., Murphy, Helen T., Reside, April E., Mokany, Karel, and VanDerWal, Jeremy (2013) Appropriateness of full-, partial- and no-dispersal scenarios in climate change impact modelling. Diversity and Distributions, 19 (10). pp. 1224-1234.

Bergemann, Sarah E., Largent, David L., and Abell-Davis, Sandra E. (2013) Entocybe haastii from Watagans National Park, New South Wales, Australia. Mycotaxon, 126. pp. 61-70.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2013) Strong intraspecific competition and habitat selectivity influence abundance of a coral-dwelling damselfish. Journal of Experimental Marine Biology and Ecology, 448. pp. 85-92.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Within-colony feeding selectivity by a corallivorous reef fish: foraging to maximize reward? Ecology and Evolution, 3 (12). pp. 4109-4118.

Baker, Anthony, Mayo, Mark, Owens, Leigh, Burgess, Graham, Norton, Robert, McBride, William John Hannan, Currie, Bart J., and Warner, Jeffrey (2013) Biogeography of Burkholderia pseudomallei in the Torres Strait Islands of Northern Australia. Journal of Clinical Microbiology, 51 (8). pp. 2520-2525.

Blowes, Shane A., Pratchett, Morgan S., and Connolly, Sean R. (2013) Heterospecific aggression and dominance in a guild of coral-feeding fishes: the roles of dietary ecology and phylogeny. American Naturalist, 182 (2). pp. 157-168.

Bott, Nathan J., Miller, Terrence L., and Cribb, Thomas H. (2013) Bucephalidae (Platyhelminthes: Digenea) of Plectropomus (Serranidae: Epinephelinae) in the tropical Pacific. Parasitology Research, 112 (7). pp. 2561-2584.

Bauman, Andrew G., Feary, David A., Heron, Scott F., Pratchett, Morgan S., and Burt, John A. (2013) Multiple environmental factors influence the spatial distribution and structure of reef communities in the northeastern Arabian Peninsula. Marine Pollution Bulletin, 72 (2). pp. 302-312.

Burt, John A., Feary, David A., Cavalcante, Georgenes, Bauman, Andrew G., and Usseglio, Paolo (2013) Urban breakwaters as reef fish habitat in the Persian Gulf. Marine Pollution Bulletin, 72 (2). pp. 342-350.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Prey selectivity affects reproductive success of a corallivorous reef fish. Oecologia, 172 (2). pp. 409-416.

Brown, Simon, and Simcock, David C. (2013) Confidence bands for rational rate equations. International Journal for Emerging Sciences, 3 (1). pp. 15-27.

Bauman, Andrew G., Pratchett, Morgan S., Baird, Andrew H., Riegl, Bernhard, Heron, Scott F., and Feary, David A. (2013) Variation in the size structure of corals is related to environmental extremes in the Persian Gulf. Marine Environmental Research, 84. pp. 43-50.

Bijoux, Jude P., Dagorn, Laurent, Berke, Gregory, Cowley, Paul D., Soria, Marc, Gaertner, Jean-Claude, and Robinson, Jan (2013) Temporal dynamics, residency and site fidelity of spawning aggregations of a herbivorous tropical reef fish Siganus sutor. Marine Ecology Progress Series, 475. pp. 233-247.

Brewer, T.D. (2013) Dominant discourses, among fishers and middlemen, of the factors affecting coral reef fish distributions in Solomon Islands. Marine Policy, 37. pp. 245-253.

Burton, Tim, Hoogenboom, Mia, Beevers, N.D., Armstrong, J.D., and Metcalfe, N.B. (2013) Among-sibling differences in the phenotypes of juvenile fish depend on their location within the egg mass and maternal dominance rank. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1751). pp. 1-7.

Bertucci, Anthony, Moya, Aurélie, Tambutté, Sylvie, Allemand, Denis, Supuran, Claudiu T., and Zoccola, Didier (2013) Carbonic anhydrases in anthozoan corals: a review. Bioorganic & Medicinal Chemistry, 21 (6). pp. 1437-1450.

Beck, Emadch (2013) Comparative phylogeography of four Indo-Pacific scarine labrids: an insight into the evolutionary patterns of reef fish. PhD thesis, James Cook University.

Bourne, David G., Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W., and Webster, Nicole (2013) Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 7. pp. 1452-1458.

Brown, Simon, Neale, Jennifer D., Nava-Tirado, Magnolia, Simpson, Heather V., Pedley, Kevin C., and Simcock, David C. (2013) Imidazole initiates exsheathing of L3 Teladorsagia circumcincta. Journal of Parasitology, 99 (2). pp. 332-336.

Bradbury, Dominique (2013) Inter- and intra- specific variation in bleaching susceptibility among scleractinian corals. PhD thesis, James Cook University.

Bromham, Lindell, Cowman, Peter F., and Lanfear, Robert (2013) Parasitic plants have increased rates of molecular evolution across all three genomes. Molecular Cancer Therapeutics, 13 (126). pp. 1-11.

Brook, Leila Amy (2013) Predator guild interactions in northern Australia: behaviour and ecology of an apex predator, the dingo Canis lupus dingo, and an introduced mesopredator, the feral cat Felis catus. PhD thesis, James Cook University.

Beasley, Isabel, Cherel, Yves, Robinson, Sue, Betty, Emma, and Gales, Rosemary (2013) Pygmy sperm whale (Kogia Breviceps) stranding record in Tasmania, Australia, and diet of a single specimen. Papers and Proceedings of the Royal Society of Tasmania, 147. pp. 25-32.

Bower, Deborah S., Hodges, Kate M., and Georges, Arthur (2013) Salinity of incubation media influences embryonic development of a freshwater turtle. Journal of Comparative Physiology B: Biochemical Systemic and Environmental Physiology, 183 (2). pp. 235-241.

Balansa, Walter, Islam, Robiul, Fontaine, Frank, Piggott, Andrew M., Zhang, Hua, Xiao, Xue, Webb, Timothy I., Gilbert, Daniel F., Lynch, Joseph W., and Capon, Robert J. (2013) Sesterterpene glycinyl-lactams: a new class of glycine receptor modulator from Australian marine sponges of the genus Psammocinia. Organic and Biomolecular Chemistry, 11. 4695. pp. 2695-4701.

Bartlett, Sofia, Seeliger, Janine, and Burnell, Jim N. (2012) Identification of critical residues in the bifunctional phosphoenolpyruvate synthetase kinase/phosphotransferase of Escherichia coli. Current Topics in Biochemical Research, 14 (1). pp. 77-83.

Brown, Simon, Muhamad, Noorzaid, Pedley, Kevin C., and Simcock, David C. (2012) What happens when the wrong equation is fitted to data? International Journal for Emerging Sciences, 2 (4). pp. 533-542.

Brooke, M. de L., Flower, T.P., Campbell, E.M., Mainwaring, M.C., Davies, S., and Welbergen, J.A. (2012) Rainfall-related population growth and adult sex ratio change in the Critically endangered Raso lark (Alauda razae). Animal Conservation, 15 (5). pp. 466-471.

Berkes, Flickrit, Doubleday, Nancy C., and Cumming, Graeme S. (2012) Aldo Leopold's land health from a resilience point of view: self-renewal capacity of social-ecological systems. EcoHealth, 9 (3). pp. 278-287.

Boaden, A.E., and Kingsford, M.J. (2012) Diel behaviour and trophic ecology of Scolopsis bilineatus (Nemipteridae). Coral Reefs, 31 (3). pp. 871-883.

Brinkman, Diane L., Mulvenna, Jason, Konstantakopoulos, Nicki, Hodgson, Wayne C., Isbister, Geoffrey K., Seymour, Jamie E., and Burnell, James N. (2012) Molecular diversity of box jellyfish toxins. Toxicon, 60 (2). pp. 148-149.

Brown, Simon, Muhamad, Noorzaid, Pedley, Kevin C., and Simcock, David C. (2012) A simple confidence band for the Michaelis-Menten equation. International Journal for Emerging Sciences, 2 (2). pp. 238-246.

Bateman, Brooke L., VanDerWal, Jeremy, and Johnson, Christopher N. (2012) Nice weather for bettongs: using weather events, not climate means, in species distribution models. Ecography, 35 (4). pp. 306-314.

Bonin, M.C. (2012) Specializing on vulnerable habitat: Acropora selectivity among damselfish recruits and the risk of bleaching-induced habitat loss. Coral Reefs, 31 (1). pp. 287-297.

Bell, Ian, and Pike, David A. (2012) Somatic growth rates of hawksbill turtles Eretmochelys imbricata in a northern Great Barrier Reef foraging area. Marine Ecology Progress Series, 446. pp. 275-283.

Beeden, Roger, Maynard, Jeffrey A., Marshall, Paul A., Heron, Scott F., and Willis, Bette L. (2012) A framework for responding to coral disease outbreaks that facilitates adaptive management. Environmental Management, 49 (1). pp. 1-13.

Brown, Simon, Pedley, Kevin C., Muhamad, Noorzaid, and Simcock, David C. (2012) Confidence band approximation using interval arithmetic. Banat's Journal of Biotechnology, 3 (5). pp. 47-50.

Bellantuono, Anthony J., Granados-Cifuentes, Camila, Miller, David J., Hoegh-Guldberg, Ove, and Rodriguez-Lanetty, Mauricio (2012) Coral thermal tolerance: tuning gene expression to resist thermal stress. PLoS ONE, 7 (11). e50685. pp. 1-14.

Bower, Deborah S., Death, Clare E., and Georges, Arthur (2012) Ecological and physiological impacts of salinisation on freshwater turtles of the lower Murray River. Wildlife Research, 39 (8). pp. 705-710.

Briffa, Mark, de la Haye, Kate, and Munday, Philip L. (2012) High CO2 and marine animal behaviour: potential mechanisms and ecological consequences. Marine Pollution Bulletin, 64 (8). pp. 1519-1528.

Bell, Ian, Schwarzkopf, Lin, and Manicom, Carryn (2012) High survivorship of an annually decreasing aggregation of hawksbill turtles, Eretmochelys imbricata, found foraging in the northern Great Barrier Reef. Aquatic Conservation: marine and freshwater ecosystems , 22 (5). pp. 673-682.

Brown, Simon, and Simcock, David C. (2012) On the thermodynamics of fatty acid oxidation. Banat's Journal of Biotechnology, 3 (5). pp. 3-9.

Busse, Stefan, Bernstein, Hans-Gert, Busse, Mandy , Bielau, Hendrik , Brisch, Ralf, Mawrin, Christian , Müller, Susan , Sarnyai, Zoltán , Gos, Tomasz , Bogerts, Bernhard, and Steiner, Johann (2012) Reduced density of hypothalamic VGF-immunoreactive neurons in schizophrenia: a potential link to impaired growth factor signaling and energy homeostasis. European Archives of Psychiatry and Clinical Neuroscience, 262 (5). pp. 365-374.

Barnett, Adam, Abrantes, Kátya, Seymour, Jamie, and Fitzpatrick, Richard (2012) Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation. PLoS One, 7 (5). pp. 1-10.

Brinkman, Diane L., Aziz, Ammar, Loukas, Alex, Potriquet, , Seymour, Jamie, and Mulvenna, Jason (2012) Venom proteome of the box jellyfish Chironex fleckeri. PLoS ONE, 7 (12). e47866. pp. 1-9.

Bruggemann, J. Henrich, Rodier, Martine, Guillaume, Mireille M.M., Andréfouët, Serge, Arfi, Robert, Cinner, Joshua E., Pichon, Michel, Ramahatatra, Frederic, Rasoamanendrika, Faravavy, Zinke, Jens, and McClanahan, Tim R. (2012) Wicked social–ecological problems forcing unprecedented change on the latitudinal margins of coral reefs: the case of southwest Madagascar. Ecology and Society, 17 (4). 47. pp. 1-17.

Blanchette, Melanie Lise (2012) The ecology of rivers in the Australian dry tropics. PhD thesis, James Cook University.

Benzoni, Francesca, Pichon, Michel, Dutrieux, Eric, Chaîneau, Claude-Henri, Abdulaziz, Malek, and Al-Thary, Ibrahim (2012) The scleractinian fauna of Yemen: diversity and species distribution patterns. In: Proceedings of the 12th International Coral Reef Symposium. 15A_1. pp. 1-6. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Bode, Michael, Bode, Lance, and Armsworth, Paul R. (2011) Different dispersal abilities allow reef fish to coexist. Proceedings of the National Academy of Sciences of the United States of America, 108 (39). pp. 16317-16321.

Brooker, R.M., Munday, P.L., and Jones, G.P. (2011) Coral obligate filefish masquerades as branching coral. Coral Reefs, 30 (3). p. 803.

Byrne, Margaret, Steane, Dorothy A., Joseph, Leo, Yeates, David K., Jordan, Greg J., Crayn, Darren, Aplin, Ken, Cantrill, David J., Cook, Lyn G., Crisp, Michael D., Keogh, J. Scott, Melville, Jane, Moritz, Craig, Porch, Nicholas, Sniderman, J.M. Kale, Sunnucks, Paul, and Weston, Peter H. (2011) Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota. Journal of Biogeography, 38 (9). pp. 1635-1656.

Beukers-Stewart, B.D., Beukers-Stewart, J.S, and Jones, G.P. (2011) Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs, 30 (3). pp. 855-864.

Beattie, Andrew J., Hay, Mark, Magnusson, Bill, de Nys, Rocky, Smeathers, James, and Vincent, Julian F.V. (2011) Ecology and bioprospecting. Austral Ecology, 36 (3). pp. 341-356.

Bourne, David G, Muirhead, Andrew, and Sato, Yui (2011) Changes in sulfate-reducing bacterial populations during the onset of black band disease. ISME Journal: multidisciplinary journal of microbial ecology, 5 (3). 559- 564.

Bertucci, Anthony, Innocenti, Alessio, Scozzafava, Andrea, Tambutté, Sylvie, Zoccola, Didier, and Supuran, Claudiu T. (2011) Carbonic anhydrase inhibitors. Inhibition studies with anions and sulfonamides of a new cytosolic enzyme from the scleractinian coral Stylophora pistillata. Bioorganic and Medicinal Chemistry Letters, 21 (2). pp. 710-714.

Bazaka, Kateryna, Crawford, Russell J., Nazarenko, Evgeny L., and Ivanova, Elena P. (2011) Bacterial extracellular polysaccharides. In: Linke , Dirk, and Goldman, Adrian, (eds.) Bacterial Adhesion: Chemistry, Biology and Physics. Advances in Experimental Medicine and Biology, 715 . Springer, London, UK, pp. 213-226.

Ball, Eldon E., de Jong, Danielle M., Schierwater, Bernd, Shinzato, Chuya, Hayward, David C., and Miller, David J. (2011) Cnidarian gene expression patterns and the origins of bilaterality – are cnidarians reading the same game plan as "higher" animals? In: DeSalle, Rob, and Schierwater, Bernd, (eds.) Key Transitions in Animal Evolution. Science Publishers, Enfield, NH, USA, pp. 197-216.

Bonin, Mary C., Almany, Glenn R., and Jones, Geoffrey P. (2011) Contrasting effects of habitat loss and fragmentation on coral-associated reef fishes. Ecology, 92 (7). pp. 1503-1512.

Brauner, C.J., and Rummer, J.L. (2011) Gas transport and exchange: interaction between O2 and CO2 exchange. In: Farrell, Anthony P., (ed.) Encyclopedia of Fish Physiology: from genome to environment. Elsevier, London, UK, pp. 916-920.

Ballagh, Debra Anne (2011) Intensive rearing techniques and feeding behaviour of larval and juvenile mulloway, Argyrosomus japonicus. PhD thesis, James Cook University.

Berumen, M.L., Pratchett, M.S., and Goodman, B.A. (2011) Relative gut lengths of coral reef butterflyfishes (Pisces: Chaetodontidae). Coral Reefs, 30 (4). pp. 1005-1010.

Broadhurst, B. T., Dyer, J. G., Ebner, B. C., Thiem, J. D., and Pridmore, P. A. (2011) Response of two-spined blackfish Gadopsis bispinosus to short-term flow fluctuations in an upland Australian stream. Hydrobiologia, 673 (1). pp. 63-77.

Bateman, Brooke L., and Johnson, Christopher N. (2011) The influences of climate, habitat and fire on the distribution of cockatoo grass (Alloteropsis semialata) (Poaceae) in the Wet Tropics of northern Australia. Australian Journal of Botany, 59 (4). pp. 315-323.

Bertucci, Anthony, Tambutté, Sylvie, Supuran, Claudiu T., Allemand, Denis, Zoccola, Didier, and UNSPECIFIED (2011) A new coral carbonic anhydrase in Stylophora pistillata. Marine Biotechnology, 13 (5). pp. 992-1002.

Barnett, Adam, Abrantes, Kátya G., Stevens, John D., Bruce, Barry D., and Semmens, Jayson M. (2010) Fine-scale movements of the broadnose sevengill shark and its main prey, the gummy shark. PLoS ONE, 5 (12). e15464. pp. 1-10.

Barnett, Adam, Abrantes, Kátya, Stevens, John D., Yick, Jonah L., Frusher, Stewart D., and Semmens, Jayson M. (2010) Predator–prey relationships and foraging ecology of a marine apex predator with a wide temperate distribution. Marine Ecology Progress Series, 416. pp. 189-200.

Bengsen, Andrew J., Leung, Luke K.-P., Lapidge, Steven J., and Gordon, Iain J. (2010) Artificial illumination reduces bait-take by small rainforest mammals. Applied Animal Behaviour Science, 127 (1-2). pp. 66-72.

Bird, Michael I., Austin, William E.N., Wurster, Christopher M., Fifield, L. Ketih, Mojtahid, Meryem, and Sargeant, Chris (2010) Punctuated eustatic sea-level rise in the early mid-Holocene. Geology, 38 (9). pp. 803-806.

Ball, Eldon E., and Miller, David J. (2010) Putting placozoans on the (phylogeographic) map. Molecular Ecology, 19 (11). pp. 2181-2183.

Bongaerts, Pim, Riginos, Cynthia, Ridgway, Tyrone, Sampayo, Eugenia M., van Oppen, Madeline J.H., Englebert, Norbert, Vermeulen, Francisca, and Hoegh-Guldberg, Ove (2010) Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium. PLoS ONE, 5 (5). e10871. pp. 1-11.

Bedoui, Sammy, Kupz, Andreas, Wijburg, Odilia L., Walduck, Anna K., Rescigno, Maria, and Strugnell, Richard A. (2010) Different bacterial pathogens, different strategies, yet the aim is the same: evasion of intestinal dendritic cell recognition. Journal of Immunology, 184 (5). pp. 2237-2242.

Bateman, Brooke L., Kutt, Alex S. , Vanderduys, Eric P., and Kemp, Jeanette E. (2010) Small-mammal species richness and abundance along a tropical altitudinal gradient: an Australian example. Journal of Tropical Ecology, 26 (2). pp. 139-149.

Bellwood, D.R., Klanten, S., Cowman, P.F., Pratchett, M.S., Konow, N., and Van Herwerden, L. (2010) Evolutionary history of the butterflyfishes (f: Chaetodontidae) and the rise of coral feeding fishes. Journal of Evolutionary Biology, 23 (2). pp. 335-349.

Bertucci, Anthony, Tambutté, Éric, Tambutté, Sylvie, Allemand, Denis, and Zoccola, Didier (2010) Symbiosis-dependent gene expression in coral-dinoflagellate association: cloning and characterization of a P-type H+-ATPase gene. Proceedings of the Royal Society of London Series B, Biological Sciences, 277 (1678). pp. 87-95.

Boyce, C. Kevin, Lee, Jung-Eun, Feild, Taylor S., Brodribb, Tim J., and Zwieniecki, Maciej A. (2010) Angiosperms helped put the rain in the rainforests: the impact of plant physiological evolution on tropical biodiversity. Annals of the Missouri Botanical Garden, 97 (4). pp. 527-540.

Ball, Tamara (2010) The BG-Sentinel™ trap as a suitable tool for Aedes aegypti surveillance in Far North Queensland, Australia. PhD thesis, James Cook University.

Bateman, Brooke Lee (2010) Beyond simple means: integrating extreme events and biotic interactions in species distribution models: conservation implications for the northern bettong (Bettongia tropica) under climate change. PhD thesis, James Cook University.

Bertucci, Anthony, Zoccola, Didier, Tambutté, Sylvie, Vullo, Daniella, and Supuran, Claudiu T. (2010) Carbonic anhydrase activators. The first activation study of a coral secretory isoform with amino acids and amines. Bioorganic & Medicinal Chemistry, 18. pp. 2300-2303.

Burnell, Jim N. (2010) Cloning and characterization of Escherichia coli DUF299: a bifunctional ADP-dependent kinase - Pi-dependent pyrophosphorylase from bacteria. BMC Biochemistry, 11 (1). pp. 1-8.

Bondarenko, Olga, Kininmonth, Stuart, and Kingsford, Michael (2010) Deployment of wireless sensor network to study oceanography of coral reefs. International Journal on Advances in Networks and Services, 3 (1 and 2). pp. 92-102.

Borsboom, Adrian C., Couper, Patrick J., Amey, Andrew, and Hoskin, Conrad J. (2010) Distribution and population genetic structure of the critically endangered skink Nangura spinosa, and the implications for management. Australian Journal of Zoology, 58 (6). pp. 369-375.

Bhagooli, R, Baird, Andrew, and Ralph, Peter (2010) Does the coral host protect its algal symbionts from heat and light stresses? In: Proceedings of the 11th International Coral Reef Symposium. pp. 113-117. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Baird, A.H., Bhagooli, R., Nonaka, M., Yakovleva, I., Yamamoto, H.H., Hidaka, M., and Yamasaki, H. (2010) Environmental controls on the establishment and development of algal symbiosis in corals. In: Proceedings of the 11th International Coral Reef Symposium. pp. 108-112. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Brown, Simon, Muhamad, Noorzaid, and Simcock, David C. (2010) Estimating enzyme kinetic parameters from apparent KMs and Vmaxs. World Academy of Science, Engineering and Technology, 4 (12). 81. pp. 431-436.

Biffin , Ed, Lucas, Eve J., Craven, Lyn A., da Costa, Itayguara Ribeiro, Harrington, Mark G., and Crisp, Michael D. (2010) Evolution of exceptional species richness among lineages of fleshy-fruited Myrtaceae. Annals of Botany, 106 (1). pp. 79-93.

Brodribb, Tim J., and Feild, Taylor S. (2010) Leaf hydraulic evolution led a surge in leaf photosynthetic capacity during early angiosperm diversification. Ecology Letters, 13 (2). pp. 175-183.

Beltran Ramirez, Victor (2010) Molecular aspects of the fluorescent protein homologues in Acropora millepora. PhD thesis, James Cook University.

Bonin, Mary Catherine (2010) Patterns of microhabitat specialization and the consequences of coral degradation for coral-associated reef fishes. PhD thesis, James Cook University.

Brodribb, Tim J., Feild, Taylor S., and Sack, Lawren (2010) Viewing leaf structure and evolution from a hydraulic perspective. Functional Plant Biology, 37 (6). pp. 488-498.

Bonaldo, Roberta Martini (2010) The ecosystem role of parrotfishes on coral reefs. PhD thesis, James Cook University.

Brinkman, Diane L., and Burnell, James N. (2009) Biochemical and molecular characterisation of cubozoan protein toxins. Toxicon, 54 (8). pp. 1162-1173.

Bay, Line, Howells, Emily J., and van Oppen, Madeleine J.H. (2009) Isolation, characterisation and cross amplification of thirteen microsatellite loci for coral endo-symbiotic dinoflagellates (Symbiodinium clade C). Conservation Genetics Resources, 1 (1). pp. 199-203.

Baird, Andrew H., Guest, James R., and Willis, Bette L. (2009) Systematic and biogeographical patterns in the reproductive biology of scleractinian corals. Annual Review of Ecology, Evolution, and Systematics, 40. pp. 551-571.

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Baird, Andrew H., Bhalla, Ravinder S. , Kerr, Alexander M., Pelkey, Neil W. , and Srinivas, V. (2009) Do mangroves provide an effective barrier to storm surges? Proceedings of the National Academy of Sciences of the United States of America, 106 (40). E111-E111.

Belli, Sabina I., Ferguson, David J.P., Katrib, Marilyn, Slapetova, Iveta, Mai, Kelly, Slapeta, Jan, Flowers, Sarah A., Miska, Kate B., Tomly, Fiona M., Shirley, Martin W., Wallach, Michael G., and Smith, Nicholas C. (2009) Conservation of proteins involved in oocyst wall formation in Eimeria maxima, Eimeria tenella and Eimeria acervulina. International Journal for Parasitology, 39 (10). pp. 1063-1070.

Bertucci, Anthony, Innocenti, Alessio, Zoccola, Didier, Scozzafava, Andrea, Tambutté, Sylvie, and Supuran, Claudiu T. (2009) Carbonic anhydrase inhibitors. Inhibition studies of a coral secretory isoform by sulfonamides. Bioorganic & Medicinal Chemistry, 17 (14). pp. 5054-5058.

Bell, I.P., Seymour, J., Fitzpatrick, R., and Hogarth, J. (2009) Inter-nesting dive and surface behaviour of green turtles, Chelonia mydas, at Raine Island, Northern Great Barrier Reef. Marine Turtle Newsletter, 125. 5 -7.

Bay, Line K., Ulstrup, Karin E., Nielsen, H. Bjorn, Jarmer, Hanne, Goffard, Nicolas, Willis, Bette L., Miller, David J., and van Oppen, Madeleine J.H. (2009) Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora. Molecular Ecology, 18 (14). pp. 3062-3075.

Boyero, Luz, Ramirez, Alonso, Dudgeon, David, and Pearson, Richard G. (2009) Are tropical streams really different? Journal of the North American Benthological Society, 28 (2). pp. 397-403.

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Bay, Line K., Nielsen, H. Bjørn, Jarmer, Hanne, Seneca, Francois, and van Oppen, Madeleine J.H. (2009) Transcriptomic variation in a coral reveals pathways of clonal organisation. Marine Genomics, 2 (2). pp. 119-125.

Buerki, Sven, Forest, Felix, Acevedo-Rodriguez, Pedro, Callmander, Martin W., Nylander, Johan A.A., Harrington, Mark, Sanmartin, Isabel, Kupfer, Philippe, and Alvarez, Nadir (2009) Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae). Molecular Phylogenetics and Evolution, 51 (2). pp. 238-258.

Bennett, Craig L., Chen, Yingzhang, Hahn, Sihoun, Glass, Ian A., and Gospe Jr, Sidney M. (2009) Prevalence of ALDH7A1 mutations in 18 North American pyridoxine-dependent seizure (PDS) patients. Epilepsia, 50 (5). pp. 1167-1175.

Beger, Richard D., Hansen, Deborah K. , Schnackenberg, Laura K. , Cross, Brandie M., Fatollahi, Javad J., Lagunero, F. Tracy, Sarnyai, Zoltan, and Boros, Laszlo G. (2009) Single valproic acid treatment inhibits glycogen and RNA ribose turnover while disrupting glucose-derived cholesterol synthesis in liver as revealed by the [U-13C6]-d-glucose tracer in mice. Metabolomics, 5 (3). pp. 336-345.

Boullosa, Daniel A., Tuimil, José L., Leicht, Anthony S., and Crespo-Salgado, Juan J. (2009) Parasympathetic modulation and running performance in distance runners. Journal of Strength and Conditioning Research, 23 (2). pp. 626-631.

Bruce, Niel L. (2009) Advances in the taxonomy and biogeography of Crustacea of the Southern Hemisphere. Pensoft.

Boyce, C. Kevin, Brodribb, Tim J., Feild, Taylor S., and Zwieniecki, Maciej A. (2009) Angiosperm leaf vein evolution was physiologically and environmentally transformative. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1663). pp. 1771-1776.

Broadhurst, Ben T., Ebner, Brendan C., and Clear, Rhian C. (2009) Effects of radio-tagging on two-year-old, endangered Macquarie perch (Macquaria australasica: Percichthyidae). Marine and Freshwater Research, 60 (4). pp. 341-345.

Brodribb, Timothy J., McAdam, Scott A.M., Jordan, Gregory J., and Feild, Taylor S. (2009) Evolution of stomatal responsiveness to CO2 and optimization of water-use efficiency among land plants. New Phytologist, 183 (3). pp. 839-847.

Baumgartner, Finn A., Motti, Cherie, de Nys, Rocky, and Paul, Nicholas A. (2009) Feeding preferences and host associations of specialist marine herbivores align with quantitative variation in seaweed secondary metabolites. Marine Ecology Progress Series, 396. pp. 1-12.

Buering, Wiebke, Pedley, Kevin, Simcock, David, and Simpson, Heather (2009) Is the H. contortus ES product which vacuolates HeLa cells a prostaglandin or lipid? New Zealand Journal of Zoology, 36 (4). p. 486.

Baird, Andrew, Birrell, Chico L., Hughes, Terence, McDonald, Abbi, Nojima, Satoshi, Page, Cathie A., Pratchett, Morgan S., and Yamasaki, Hideo (2009) Latitudinal variation in reproductive synchrony in Acropora assemblages: Japan vs. Australia. Galaxea, Journal of Coral Reef Studies, 11 (2). pp. 101-108.

Bruce, Niel L. (2009) The Marine Fauna of New Zealand: Isopoda, Aegidae (Crustacea). National Institute of Water and Atmospheric Research, New Zealand.

Bruce, Niel L. (2009) New genera and species of the marine isopod family Serolidae (Crustacea, Sphaeromatidea) from the southwestern Pacific. ZooKeys, 18. pp. 17-76.

Broadhurst, Ben T., Ebner, Brendan C., and Clear, Rhian C. (2009) Radio-tagging flexible-bodied fish: temporary confinement enhances radio-tag retention. Marine and Freshwater Research, 60 (4). pp. 356-360.

Baird, A.H., and Guest , J.R. (2009) Spawning synchrony in scleractinian corals: comment on Mangubhai & Harrison (2008). Marine Ecology Progress Series, 374. pp. 301-304.

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Bruce, Niel L. (2009) A new genus and new species of Sphaeromatidae (Crustacea: Isopoda) from the Great Barrier Reef, Australia. Memoirs of Museum of Victoria, 66 (1). pp. 35-42.

Bruce, Niel L. (2009) A new species of Joeropsis Koehler, 1885 (Isopoda, Asellota, Joeropsididae) from the Great Barrier Reef, Australia. Crustaceana, 82 (7). pp. 803-811.

Bruce, Niel L., and Wetzer, Regina (2008) New Zealand exports: Pseudosphaeroma Chilton, 1909 (Isopoda: Sphaeromatidae), a Southern Hemisphere genus introduced to the Pacific coast of North America. Zootaxa, 1908. pp. 51-56.

Brix, Saskia, and Bruce, Niel L. (2008) Prochelator tupuhi sp. nov., the first record of Desmosomatidae Sars, 1987 (Crustacea: Isopoda) from New Zealand waters. Zootaxa, 1866. pp. 482-492.

Boyle, M.C., and Limpus, C.J. (2008) The stomach contents of post-hatchling green and loggerhead sea turtles in the southwest Pacific: an insight into habitat association. Marine Biology, 155 (2). pp. 233-241.

Bruce, Niel L. (2008) New species and a new genus of Cirolanidae (Isopoda: Cymothoida: Crustacea) from groundwater in calcretes in the Pilbara, northern Western Australia. Zootaxa, 1823. pp. 51-64.

Bonaldo, Roberta M., and Bellwood, David R. (2008) Size-dependent variation in the functional role of the parrotfish Scarus rivulatus on the Great Barrier Reef, Australia. Marine Ecology Progress Series, 360. pp. 237-244.

Brinkman, Diane, and Burnell, James (2008) Partial purification of cytolytic venom proteins from the box jellyfish, Chironex fleckeri. Toxicon, 51 (5). pp. 853-863.

Bruce, Niel L. (2008) New species of Tridentella Richardson, 1905 (Isopoda: Cymothoida: Tridentellidae), tropical marine isopod crustaceans from the Banda Sea, Indonesia. Zootaxa, 1734. pp. 43-58.

Bourne, David G., Boyett, Holly V., Henderson, Meegan E., Muirhead, Andrew, and Willis, Bette L. (2008) Identification of a ciliate (Oligohymenophorea: Scuticociliatia) associated with brown band disease on corals of the Great Barrier Reef. Applied and Environmental Microbiology, 74 (3). pp. 883-888.

Bourne, David, Iida, Yuki, Uthicke, Sven, and Smith-Keune, Carolyn (2008) Changes in coral-associated microbial communities during a bleaching event. ISME Journal: multidisciplinary journal of microbial ecology, 2. pp. 350-363.

Birrell, Chico L., McCook, Laurence J., Willis, Bette L., and Harrington, Lindsay (2008) Chemical effects of macroalgae on larval settlement of the broadcast spawning coral Acropora millepora. Marine Ecology Progress Series, 362. pp. 129-137.

Birrell, Chico L., McCook, Laurence J., Willis, Bette L., and Diaz-Pulido, Guillermo A. (2008) Effects of benthic algae on the replenishment of corals and the implications for the resilience of coral reefs. Oceanography and Marine Biology: an annual review, 46. pp. 25-63.

Brodribb, Tim J., and Feild, Taylor S. (2008) Evolutionary significance of a flat-leaved Pinus in Vietnamese rainforest. New Phytologist, 178 (1). pp. 201-209.

Bannister, Raymond (2008) The ecology and feeding biology of the sponge Rhopaloeides odorabile. PhD thesis, James Cook University.

Benvenutti, M.A., Gordon, I.J., and Poppi, D.P. (2008) The effects of stem density of tropical swards and age of grazing cattle on their foraging behaviour. Grass and Forage Science, 63 (1). pp. 1-8.

Baker, Ron, and Sheaves, Marcus (2007) Shallow-water refuge paradigm: conflicting evidence from tethering experiments in a tropical estuary. Marine Ecology Progress Series, 349. pp. 13-22.

Bay, Line K., Crozier, Y. Ching, and Crozier, Ross H. (2007) Isolation and characterization of eight microsatellite loci in the mangrove mud-nesting ant, Polyrhachis sokolova. Molecular Ecology Notes, 7 (6). pp. 1239-1241.

Bonaldo, R.M., Krajewski, J.P., Sazima, C., and Sazima, I. (2007) Dentition damage in parrotfishes feeding on hard surfaces at Fernando de Noronha Archipelago, southwest Atlantic Ocean. Marine Ecology Progress Series, 342. pp. 249-254.

Bergman, Martin, Gotthard, Karl, Berger, David, Olofsson, Martin, Kemp, Darrell J., and Wiklund, Christer (2007) Mating success of resident versus non-resident males in a territorial butterfly. Proceedings of the Royal Society of London Series B, Biological Sciences, 274 (1618). pp. 1659-1665.

Boyett, Holly V., Bourne, David G., and Willis, Bette L. (2007) Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef. Marine Biology, 151 (5). pp. 1711-1720.

Bruno, John F., Selig, Elizabeth R., Casey, Kenneth S., Page, Cathie A., Willis, Bette L., Harvell, C. Drew, Sweatman, Hugh, and Melendy, Amy M. (2007) Thermal stress and coral cover as drivers of coral disease outbreaks. Public Library of Science Biology, 5 (6). 0001-0008.

Bozzano, A., Pankhurst, P.M., and Sabates, A. (2007) Early development of eye and retina in lanternfish larvae. Visual Neuroscience, 24 (3). pp. 423-436.

Bassett, D.K., Carton, A.G., and Montgomery, J.C. (2007) Saltatory search in a lateral line predator. Journal of Fish Biology, 70 (4). pp. 1148-1160.

Biffin, E., Harrington, M.G., Crisp, M.D., Craven, L.A., and Gadek, P.A. (2007) Structural partitioning, paired-sites models and evolution of the ITS transcript in Syzygium and Myrtaceae. Molecular Phylogenetics and Evolution, 43 (1). pp. 124-139.

Bastian, Mikis, Boyero, Luz, Jackes, Betsy R., and Pearson, Richard G. (2007) Leaf litter diversity and shredder preferences in an Australian tropical rain-forest stream. Journal of Tropical Ecology, 23 (2). pp. 219-229.

Blüthgen, Nico, and Stork, Nigel E. (2007) Ant mosaics in a tropical rainforest in Australia and elsewhere: a critical review. Austral Ecology, 32 (1). pp. 93-104.

Bondarenko, Olga, Kininmonth, Stuart, and Kingsford, Michael (2007) Underwater sensor networks, oceanography and plankton assemblages. In: Proceedings of the 2007 International Conference on Intelligent Sensors, Sensor Networks and Information Processing . pp. 657-662. From: International Conference on Intelligent Sensors, Sensor Networks and Information Processing (ISSNIP) 2007, 3-6 December 2007, Melbourne, Vic, Australia.

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Baker, C.F., Carton, A.G., Fine, J .M., and Sorensen, P.W. (2006) Can bile acids function as a migratory pheromone in banded kokopu, Galaxias fasciatus (Gray)? Ecology of Freshwater Fish, 15 (3). pp. 275-283.

Bardeleben, Carolyne, Gray, Melissa M., and Hoskin, Conrad J. (2006) Isolation of polymorphic tetranucleotide microsatellite markers for the ornate nursery frog Cophixalus ornatus. Molecular Ecology Notes, 6 (3). pp. 888-890.

Beer, Andrew C., and Southgate, Paul C. (2006) Spat collection, growth and meat yield of Pinna bicolor (Gmelin) in suspended culture in northern Australia. Aquaculture, 258 (1-4). pp. 424-429.

Boyero, Luz, Pearson, Richard G., and Camacho, Regina (2006) Leaf breakdown in tropical streams: the role of different species in ecosystem functioning. Fundamental and Applied Limnology, 166 (4). pp. 453-466.

Beck, Jennifer L., Urathamakul, Thitima, Watt, Stephen J., Sheil, Margaret M., Schaeffer, Patrick M., and Dixon, Nicholas E. (2006) Proteomic dissection of DNA polymerization. Expert Review of Proteomics, 3 (2). pp. 197-211.

Bulmer, Mark S., and Crozier, Ross H. (2006) Variation in positive selection in termite GNBPs and Relish. Molecular Biology and Evolution, 23 (2). pp. 317-326.

Berumen, Michael L., and Pratchett, Morgan S. (2006) Effects of resource availability on the competitive behaviour of butterflyfishes (Chaetodontidae). In: Proceedings of the International Coral Reef Symposium. pp. 644-650. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa Convention Cente, Okinawa, Japan.

Baker, Ronald (2006) Piscivory and the functioning of shallow tropical estuarine nursery grounds. PhD thesis, James Cook University.

Brust, A., Alewood, D., Colless, B, Palant, E, Patterson, B, Wilson, D, Watson, F, Schroeder , C.I., Alewood, P.F., and Lewis, R.J. (2006) conopeptide to drug: the development, structure and activity correlation of Xen2174. Journal of Peptide Science, 12 (Supplement 1). M418. p. 516.

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Baird, Andrew H., Campbell, Stuart J., Anggoro, Aji W., Ardiwijaya, Rizya L., Fadli, Nur, Herdiana, Yudi, Kartawijaya, Tasrif, Mahyiddin, Dodent, Mukminin, Ahmad, Pardede, Shinta T., Pratchett, Morgan S., Rudi, Edi, and Siregar, Achis M. (2005) Acehnese reefs in the wake of the Asian tsunami. Current Biology, 15 (21). pp. 1926-1930.

Barnett, A., and Bellwood, D.R. (2005) Sexual Dimorphism in the buccal cavity of paternal mouthbrooding cardinalfishes (Pisces: Apogonidae). Marine Biology, 148 (1). pp. 205-212.

Bellwood, D.R., Hughes, T.P., Connolly, S.R., and Tanner, J. (2005) Environmental and geometric constraints on Indo-Pacific coral reef biodiversity. Ecology Letters, 8 (6). pp. 643-651.

Bergenius, Mikaela A.J., McCormick, Mark I., Meekan, Mark G., and Robertson, D. Ross (2005) Environmental influences on larval duration, growth and magnitude of settlement of a coral reef fish. Marine Biology, 147 (2). pp. 291-300.

Brodie, Gilliane D. (2005) Redescription of the Australian endemic nudibranch Dendrodoris maugeana Burn, 1962 (Gastropoda: Opisthobranchia: Doridoidea): new and reviewed features important for phylogenetic analyses of porostomes. Molluscan Research, 25 (1). pp. 37-46.

Barber, Paul H., and Bellwood, David R. (2005) Biodiversity hotspots: evolutionary origins of biodiversity in wrasses (Halichoeres: Labridae) in the Indo-Pacific and new world tropics. Molecular Phylogenetics and Evolution, 35 (1). pp. 235-253.

Browne, J.G., and Kingsford, M.J. (2005) A commensal relationship between the scyphozoan medusae Catostylus mosaicus and the copepod Paramacrochiron maximum. Marine Biology, 146 (6). pp. 1157-1168.

Berumen, Michael L. (2005) The importance of juveniles in modelling growth: butterflyfish at Lizard Island. Environmental Biology of Fishes, 72 (4). pp. 409-413.

Beckenbach, Andrew T., Robson, Simon K.A., and Crozier, Ross H. (2005) Single nucleotide +1 frameshifts in an apparently functional mitochondrial cytochrome b gene in ants of the genus Polyrhachis. Journal of Molecular Evolution, 60 (2). pp. 141-152.

Bailey, Paul M., Bakker, Anthony J., Seymour, Jamie E., and Wilce, Jacqueline A. (2005) A functional comparison of the venom of three Australian jellyfish—Chironex fleckeri, Chiropsalmus sp., and Carybdea xaymacana—on cytosolic Ca2+, haemolysis and Artemia sp. lethality. Toxicon, 45 (2). pp. 233-242.

Blair, David (2005) Cestode and trematode infections. In: Rohde, Klaus, (ed.) Marine Parasitology. CSIRO Publishing, Collingwood, VIC, Australia, pp. 427-446.

Bell, Alicia M., and Duke, Norman C. (2005) Effects of Photosystem II-inhibiting herbicides on mangroves: preliminary toxicology trials. Marine Pollution Bulletin, 51 (1-4). pp. 297-307.

Birrell, Chico L., McCook, Laurence J., and Willis, Bette L. (2005) Effects of algal turfs and sediment on coral settlement. Marine Pollution Bulletin, 51 (1-4). pp. 408-414.

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Barton, D.P., and Blair, D. (2005) Family Notocotylidae Luhe, 1909. In: Jones, A., Bray, R.A., and Gibson, D.I., (eds.) Keys to the Trematoda. CAB International, Wallingford, Oxfordshire, UK, pp. 383-396.

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Blair, David (2005) Family Pronocephalidae Looss, 1899. In: Jones, A., Bray, R.A., and Gibson, D.I., (eds.) Keys to the Trematoda. CAB International, Wallingford, Oxfordshire, UK, pp. 361-380.

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Blair, D. (2005) Family Rhytidodidae Odhner, 1926. In: Jones, A., Bray, R.A., and Gibson, D.I., (eds.) Keys to the Trematoda. CAB International, Wallingford, Oxfordshire, UK, pp. 123-125.

Baxter, Alan G., Jordan, Margaret A., Silveira, Pablo A., Wilson, Wendy E., and van Driel, Ian R. (2005) Genetic control of susceptibility to autoimmune gastritis. International Reviews of Immunology, 24 (1-2). pp. 55-62.

Berger, Lee, Hyatt, Alex D., Speare, Rick, and Longcore, Joyce E. (2005) Life cycle stages of the amphibian chytrid Batrachochytrium dendrobatidis. Diseases of Aquatic Organisms, 68 (1). pp. 51-63.

Blair, David, Chang, Zhengshan, Chen, Minggang, Cui, Aili, Wu, Bo, Agatsuma, Takeshi, Iwagami, Moritoshi, Corlis, David, Fu, Chengbin, and Zhan, Ximei (2005) Paragonimus skrjabini Chen, 1959 (Digenea: Paragonimidae) and related species in eastern Asia: A combined molecular and morphological approach to identification and taxonomy. Systematic Parasitology, 60 (1). pp. 1-21.

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Bulmer, Mark S., and Crozier, Ross H. (2004) Duplication and diversifying selection among termite antifungal peptides. Molecular Biology and Evolution, 21 (12). pp. 2256-2264.

Baxter, Alan G., and Duckworth, Rowena C. (2004) Models of type I (autoimmune) diabetes. Drug Discovery Today: Disease Models, 1 (4). pp. 451-455.

Bastidas, C., Fabricius, K.E., and Willis, B.L. (2004) Demographic aspects of the soft coral Sinularia flexibilis leading to local dominance on coral reefs. Hydrobiologia, 530 (1-3). pp. 433-441.

Blüthgen, Nico, Stork, Nigel E., and Fiedler, Konrad (2004) Bottom-up control and co-occurrence in complex communities: honeydew and nectar determine a rainforest ant mosaic. Oikos, 106 (2). pp. 344-358.

Ball, Eldon E., Hayward, David C., Saint, Robert, and Miller, David J. (2004) A simple plan: cnidarians and the origins of developmental mechanisms. Nature Reviews: Genetics, 5 (8). pp. 567-577.

Bay, L.K., Choat, J.H., van Herwerden, L., and Robertson, D.R. (2004) High genetic diversities and complex genetic structure in an Indo-Pacific tropical reef fish (Chlorurus sordidus): evidence of an unstable evolutionary past? Marine Biology, 144 (4). pp. 757-767.

Burry, R.K., Bonnett, G.D., and Holtum, J.A.M. (2004) Reassessing waterlogging: methods to compare the response of different sugarcane genotypes. Proceedings of the Australian Society of Sugar Cane Technologists, 26. pp. 1-16.

Beger, Maria, Jones, Geoffrey P., and Munday, Philip L. (2003) Conservation of coral reef biodiversity: a comparison of reserve selection procedures for corals and fishes. Biological Conservation, 111 (1). pp. 53-62.

Baird, A.H., Babcock, R.C., and Mundy, C.P. (2003) Habitat selection by larvae influences the depth distribution of six common coral species. Marine Ecology Progress Series, 252. pp. 289-293.

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Bellwood, David R. (2003) Origins and escalation of herbivory in fishes: a functional perspective. Paleobiology, 29 (1). pp. 71-83.

Blows, Mark W., and Higgie, Megan (2003) Genetic constraints on the evolution of mate recognition under natural selection. American Naturalist, 161 (2). pp. 240-253.

Babcock, Russ C., Baird, Andrew H., Piromvaragorn, Srisakul, Thomson, Damian P., and Willis, Bette L. (2003) Identification of scleractinian coral recruits from Indo-Pacific reefs. Zoological Studies, 42 (1). pp. 211-226.

Berge, Bjorn (2003) Predatory behaviour of theraphosid spiders in northern Queensland. Masters (Research) thesis, James Cook University.

Brown, B., and Copeman, D.B. (2003) Zoonotic importance of parasites in wild dogs caught in the vicinity of Townsville. Australian Veterinary Journal, 81 (11). pp. 700-702.

Blows, Mark W., and Higgie, Megan (2002) Evolutionary experiments on mate recognition in the Drosophila serrata species complex. Genetica, 116 (2-3). pp. 239-250.

Bellwood, D.R., Wainwright, P.C. , Fulton, C.J., and Hoey, A. (2002) Assembly rules and functional groups at global biogeographical scales. Functional Ecology, 16 (5). pp. 557-562.

Bastidas, C., Benzie, J.A.H., and Fabricius, K.E. (2002) Genetic differentiation among populations of the brooding soft coral Clavularia koellikeri on the Great Barrier Reef. Coral Reefs, 21 (3). pp. 233-241.

Belov, Katherine, Nguyen, Mai-Anh T., Zenger, Kyall R., and Cooper, Desmond W. (2002) Ontogeny of immunoglobulin expression in the brushtail possum (Trichosurus vulpecula). Developmental and Comparative Immunology, 26 (7). pp. 599-602.

Baird, A.H., and Marshall, P.A. (2002) Mortality, growth and reproduction in scleractinian corals following bleaching on the Great Barrier Reef. Marine Ecology Progress Series, 237. pp. 133-141.

Bean, Kyi, Jones, Geoffrey P., and Caley, M. Julian (2002) Relationships among distribution, abundance and microhabitat specialisation in a guild of coral reef triggerfish (family Balistidae). Marine Ecology - Progress Series, 233. pp. 263-272.

Bellwood, David R., and Wainwright, Peter C. (2002) The history and biogeography of fishes on coral reefs. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 5-32.

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Cortés, Alba, Sotillo, Javier, Muñoz-Antoli, Carla, Fried, Bernard, Esteban, J. Guillermo, and Toledo, Rafael (2015) Altered protein expression in the ileum of mice associated with the development of chronic infections with Echinostoma caproni (Trematoda). PLoS Neglected Tropical Disease, 9 (9). e0004082. pp. 1-25.

Cortés, A., Muñoz-Antoli, C., Sotillo, J., Fried, B., Esteban, J.G., and Toledo, R. (2015) Echinostoma caproni (Trematoda): differential in vivo mucin expression and glycosylation in high- and low-compatible hosts. Parasite Immunology, 37 (1). pp. 32-42.

Crayn, Darren M., Costion, Craig, and Harrington, Mark G. (2015) The Sahul–Sunda floristic exchange: dated molecular phylogenies document Cenozoic intercontinental dispersal dynamics. Journal of Biogeography, 42 (1). pp. 11-24.

Cooper, T., Furtado, A., Henry, R.J., and Crayn, D. (2015) Analysis of the chloroplast genome of a coffee relative from northern Australia. Acta Horticulturae, XXIX. pp. 177-182.

Chapple, David G., Miller, Kimberly A., Chaplin, Kirilee, Barnett, Louise, Thompson, Michael B., and Bray, Rebecca D. (2015) Biology of the invasive delicate skink (Lampropholis delicata) on Lord Howe Island. Australian Journal of Zoology, 62 (6). pp. 498-506.

Caron, Alexandre, Cappelle, Julien, Cumming, Graeme S., de Garine-Wichatitsky, Michel, and Gaidet, Nicolas (2015) Bridge hosts, a missing link for disease ecology in multi-host systems. Veterinary Research, 46. 83.

Chaiyadet, Sujittra, Sotillo, Javier, Smout, Michael, Cantacessi, Cinzia, Jones, Malcolm K., Johnson, Michael S., Turnbull, Lynne, Whitchurch, Cynthia B., Potriquet, Jeremy, Laohaviroj, Marut, Mulvenna, Jason, Brindley, Paul J., Bethony, Jeffrey M., Laha, Thewarach, Sripa, Banchob, and Loukas, Alex (2015) Carcinogenic liver fluke secretes extracellular vesicles that promote cholangiocytes to adopt a tumorigenic phenotype. Journal of Infectious Diseases, 212 (10). pp. 1636-1645.

Chan, Lai Yue, Craik, David J., and Daly, Norelle L. (2015) Cyclic thrombospondin-1 mimetics: grafting of a thrombospondin sequence into circular disulfide-rich frameworks to inhibit endothelial cell migration. Bioscience Reports, 35. e00270. pp. 1-12.

Cappelle, J., Caron, A., de Almeida, R. Servan, Gil, P., Pedrono, M., Mundava, J., Fofana, B., Balanca, G., Dakouo, M., El Mamy, A.B. Ould, Abolnik, C., Maminiaina, O.F., Cumming, G.S., De Visscher, M-N., Albina, E., Chevalier, V., and Gaidet, N. (2015) Empirical analysis suggests continuous and homogeneous circulation of Newcastle disease virus in a wide range of wild bird species in Africa. Epidemiology and Infection, 143 (6). pp. 1292-1303.

Chandrashekar, Preeti, Manickam, Ravikumar, Ge, Xiaojia, Bonala, Sabeera, McFarlane, Craig, Sharma, Mridula, Wahli, Walter, and Kambadur, Ravi (2015) Inactivation of PPARβ/δ adversely affects satellite cells and reduces postnatal myogenesis. American Journal of Physiology-Endocrinology and Metabolism, 309. E122-E131.

Cannon, Leah, Yu, Ze-Yan, Marciniec, Tadeusz, Waardenberg, Ashley J., Iismaa, Siiri E., Nikolova-Krstevski, Vesna, Neist, Elysia, Ohanian, Monique, Qiu, Min Ru, Rainer, Stephen, Harvey, Richard P., Feneley, Michael P., Graham, Robert M., and Fatkin, Diane (2015) Irreversible triggers for hypertrophic cardiomyopathy are established in the early postnatal period. Journal of the American College of Cardiology, 65 (6). pp. 560-569.

Cumming, David H.M., and Cumming, Graeme S, (2015) One Health: an ecological and conservation perspective. In: Zinsstag, Jakob, Schelling, Esther, Waltner-Toews, David, Whittaker, Maxine, and Tanner, Marcel, (eds.) One Health: the theory and practice of integrated health approaches. CABI International, Wallingford, UK, pp. 38-52.

Crayn, Darren M., Winter, Klaus, Schulte, Katharina, and Smith, J. Andrew C. (2015) Photosynthetic pathways in Bromeliaceae: phylogenetic and ecological significance of CAM and C3 based on carbon isotope ratios for 1893 species. Botanical Journal of the Linnean Society, 178 (2). pp. 169-221.

Clouse, Ronald M., Linchango, Gregorio V., Kerr, Alexander M., Reid, Robert W., and Janies, Daniel A. (2015) Phylotranscriptomic analysis uncovers a wealth of tissue inhibitor of metalloproteinases variants in echinoderms. Royal Society Open Science, 2. 150377. pp. 1-14.

Capper, Roxana L., Jin, Young K., Lundgren, Petra B., Peplow, Lesa M., Matz, Mikhail V., and van Oppen, Madeleine J.H. (2015) Quantitative high resolution melting: two methods to determine SNP allele frequencies from pooled samples. BMC Genetics, 16. 62. pp. 1-13.

Cooke, Ira R., Whitelaw, Brooke, Norman, Mark, Caruana, Nikeisha, and Strugnell, Jan (2015) Toxicity in cephalopods. In: Gopalakrishnakone, P., and Malhotra, Anita, (eds.) Evolution of Venomous Animals and Their Toxins. Toxinology . Springer, Leiden, The Netherlands, pp. 1-15.

Cumming, Graeme S., Allen, Craig R., Ban, Natalie C., Biggs, Duan, Biggs, Harry C., Cumming, David H.M., De Vos, Alta, Epstein, Graham, Etienne, Michel, Maciejewski, Kristine, Mathevet, Raphael, Moore, Christine, Nenadovic, Mateja, and Schoon, Michael (2015) Understanding protected area resilience: a multi-scale, social-ecological approach. Ecological Applications, 25 (2). pp. 299-319.

Calder, Jordan-Laine, Cumming, Graeme S., Maciejewski, Kristine, and Oschadleus, H. Dieter (2015) Urban land use does not limit weaver bird movements between wetlands in Cape Town, South Africa. Biological Conservation, 187. pp. 230-239.

Cumming, Graeme S., Abolnik, Celia, Caron, Alexandre, Gaidet, Nicolas, Grewar, John, Hellard, Eléonore, Henry, Dominic A.W., and Reynolds, Chevonne (2015) A social–ecological approach to landscape epidemiology: geographic variation and avian influenza. Landscape Ecology, 30 (6). pp. 963-985.

Cutmore, Scott C., Miller, Terrence L., Bray, Rodney A., and Cribb, Thomas H. (2014) A new species of Plectognathotrema Layman, 1930 (Trematoda: Zoogonidae) from an Australian monacanthid, with a molecular assessment of the phylogenetic position of the genus. Systematic Parasitology, 89 (3). pp. 237-246.

Chong-Seng, K.M., Graham, N.A.J., and Pratchett, M.S. (2014) Bottlenecks to coral recovery in the Seychelles. Coral Reefs, 33 (2). pp. 449-461.

Cortes, Alba, Sotillo, Javier, Muñoz-Antoli, Carla, Fried, Bernard, Esteban, J-Guillermo, and Toledo, Rafael (2014) Intestinal IFN-γ production is associated with protection from clinical signs, but not with elimination of worms, in Echinostoma caproni infected-mice. Parasitology Research, 113 (6). pp. 2037-2045.

Chong-Seng, K.M., Nash, K.L., Bellwood, D.R., and Graham, N.A.J. (2014) Macroalgal herbivory on recovering versus degrading coral reefs. Coral Reefs, 33 (2). pp. 409-419.

Canard, E.F., Mouquet, N., Mouillot, D., Stanko, M., Miklisova, D., and Gravel, D. (2014) Empirical evaluation of neutral interactions in host-parasite networks. American Naturalist, 183 (4). pp. 468-479.

Coker, Darren J., Wilson, Shaun K., and Pratchett, Morgan S. (2014) Importance of live coral habitat for reef fishes. Reviews in Fish Biology and Fisheries, 24 (1). pp. 89-126.

Chung, Wen-Sung, Marshall, N. Justin, Watson, Sue-Ann, Munday, Philip L., and Nilsson, Göran E. (2014) Ocean acidification slows retinal function in a damselfish through interference with GABAA receptors. Journal of Experimental Biology, 217. pp. 323-326.

Cooke , Steven J., Messmer, Vanessa, Tobin, Andrew J., Pratchett, Morgan S., and Clark, Timothy D. (2014) Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish flag snapper (Lutjanus carponotatus) on the Great Barrier Reef. Physiological and Biochemical Zoology, 87 (1). pp. 136-147.

Cole, Andrew J., and Pratchett, Morgan S. (2014) Diversity in diet and feeding behaviour of butterflyfishes: reliance on reef corals versus reef habitats. In: Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 107-139.

Chong-Seng, Karen Michelle (2014) Ecological structure and processes on disturbed coral reefs. PhD thesis, James Cook University.

Carrette, Teresa Jo (2014) Etiology of Irukandji Syndrome with particular focus on the venom ecology and life history of one medically significant carybdeid box jellyfish Alatina moseri. PhD thesis, James Cook University.

Cowman, Peter F. (2014) Historical factors that have shaped the evolution of tropical reef fishes: a review of phylogenies, biogeography, and remaining questions. Frontiers in Genetics, 5. 394. pp. 1-15.

Cumming, Graeme, Buerkert, Andreas, Hoffmann, Ellen M., Schlecht, Eva, von Cramon-Taubadel, Stephan, and Tscharntke, Teja (2014) Implications of agricultural transitions and urbanization for ecosystem services. Nature, 515 (7525). pp. 50-57.

Castle, Scott, Kernan, Elizabeth, Backhausen, Megan, Delarue, Emma, Fossen, Ket, Graziano, Catalina, Hawkes, Jennifer, Locastro, Taylah, Mason, Michelle, Corban, Chris, Reardon, Terry, and Robson, Simon (2014) Ongoing studies on the bats of Danum Valley Borneo. In: Abstracts from the 16th Australasian Bat Society Conference. From: 16th Australasian Bat Society Conference, 22-25 April 2014, Townsville, QLD, Australia.

Caballes, Ciemon F., and Pratchett, Morgan S. (2014) Reproductive biology and early life history of the crown-of-thorns starfish. In: Whitmore, Eric, (ed.) Echinoderms: ecology, habitats and reproductive biology. Marine Biology . Nova Science Publishers, New York, NY, USA, pp. 101-146.

Chivers, Douglas P., Ramasamy, Ryan A., McCormick, Mark I., Watson, Sue-Ann, Siebeck, Ulrike E., and Ferrari, Maud C.O. (2014) Temporal constraints on predation risk assessment in a changing world. Science of the Total Environment, 500-501. pp. 332-338.

Cumming, Graeme S. (2014) Theoretical frameworks for the analysis of social–ecological systems. In: Sakai, Shoko, and Umetsu, Chieko, (eds.) Social–Ecological Systems in Transition. Global Environmental Studies . Springer, Tokyo, Japan, pp. 3-24.

Cribb, Thomas H., Bott, Nathan J., Bray, Rodney A., McNamara, Marissa K.A., Miller, Terrence L., Nolan, Matthew J., and Cutmore, Scott C. (2014) Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and richness in coral reef fishes. International Journal for Parasitology, 44 (12). pp. 929-939.

Cole, A.J., Lawton, R.J., Pisapia, C., and Pratchett, M.S. (2014) The effects of coral bleaching on settlement preferences and growth of juvenile butterflyfishes. Marine Environmental Research, 98. pp. 106-110.

Cerqueira, Gustavo M., Kostoulias, Xenia, Khoo, Chen, Aibinu, Ibukun, Qu, Yue, Traven, Ana, and Peleg, Anton Y. (2014) A global virulence regulator in Acinetobacter baumannii and its control of the phenylacetic acid catabolic pathway. Journal of Infectious Diseases, 210 (1). pp. 46-55.

Cribb, Thomas H., Miller, Terrence L., Bray, Rodney A., and Cutmore, Scott C. (2014) The sexual adult of Cercaria praecox Walker, 1971 (Digenea: Fellodistomidae), with the proposal of Oceroma n. g. Systematic Parasitology, 88 (1). pp. 1-10.

Chen, W., Tang, Z.H., Fan, X.G., Wang, Y., and Pike, D.A. (2013) Maternal investment increases with altitude in a frog on the Tibetan Plateau. Journal of Evolutionary Biology, 26 (12). pp. 2710-2715.

Chartrand, K., McCormack, C., Thomas, R., Rasheed, M., and Ralph, P. (2013) Environmental tolerances and drivers of deepwater seagrass change: implications and tools for coastal development management. In: 22nd Biennial Conference of the Coastal and Estuarine Research Federation: abstract book. p. 39. From: CERF2013 Toward Resilient Coasts and Estuaries, Science for Sustainable Solutions, 3-7 November 2013, San Diego, California.

Cantacessi, Cinzia, Prasopdee, Sattrachai, Sotillo, Javier, Mulvenna, Jason, Tesana, Smarn, and Loukas, Alex (2013) Coming out of the shell: building the molecular infrastructure for research on parasite-harbouring snails. PLoS Neglected Tropical Diseases, 7 (9). e2284. pp. 1-4.

Cutmore, Scott C., Miller, Terrence L., Curran, Stephen S., Bennett, Michael B., and Cribb, Thomas H. (2013) Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112 (8). pp. 3063-3074.

Capper, Angela, Flewelling, Leanne J., and Arthur, Karen (2013) Dietary exposure to harmful algal bloom (HAB) toxins in the endangered manatee (Trichechus manatus latirostris) and green sea turtle (Chelonia mydas) in Florida, USA. Harmful Algae, 28. pp. 1-9.

Courtney, Robert, and Seymour, Jamie (2013) Seasonality in polyps of a tropical cubozoan: a latina nr mordens. PLoS ONE, 8 (7). e69369. pp. 1-6.

Cumming, Graeme S., Olsson, Per, Chapin, F.S., and Holling, C.S. (2013) Resilience, experimentation, and scale mismatches in social-ecological landscapes. Landscape Ecology, 28 (6). pp. 1139-1150.

Couper, Patrick, and Hoskin, Conrad (2013) Two new subspecies of the leaf-tailed gecko Phyllurus ossa (Lacertilia: Carphodactylidae) from mid-eastern Queensland, Australia. Zootaxa, 3664 (4). pp. 537-553.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2013) Olfactory discrimination in juvenile coral reef fishes: response to conspecifics and corals. Journal of Experimental Marine Biology and Ecology, 443. pp. 21-26.

Conibear, Anne C., Rosengren, K. Johan, Daly, Norelle, Henriques, Sonia Troeira, and Craik, David J. (2013) The cyclic cystine ladder in θ-defensins is important for structure and stability, but not antibacterial activity. Journal of Biological Chemistry, 288 (15). pp. 10830-10840.

Chi, Bui Khanh, Roberts, Alexandra A., Huyen, Tran Thi Thanh, Bäsell, Katrin, Becher, Dorte, Albrecht, Dirk, Hamilton, Chris J., and Antelmann, Haike (2013) S-bacillithiolation protects conserved and essential proteins against hypochlorite stress in Firmicutes bacteria. Antioxidants & Redox Signaling, 18 (11). pp. 1273-1295.

Chan, Lai Yue, Zhang, Veronica M., Huang, Yen-hua, Waters, Norman C., Bansal, Paramjit S., Craik, David J., and Daly, Norelle L. (2013) Cyclization of the antimicrobial peptide gomesin with native chemical ligation: influences on stability and bioactivity. ChemBioChem, 14 (5). pp. 617-624.

Chatfield, Matthew W.H., Brannelly, Laura A., Robak, Matthew J., Freeborn, Layla, Lailvaux, Simon P., and Richards-Zawacki, Corinne L. (2013) Fitness consequences of infection by Batrachochytrium dendrobatidis in northern leopard frogs (Lithobates pipiens). EcoHealth, 10 (1). pp. 90-98.

Cheesman, Alexander W., and Winter, Klaus (2013) Elevated night-time temperatures increase growth in seedlings of two tropical pioneer tree species. New Phytologist, 197 (4). pp. 1185-1192.

Collin, Sean, Costello, John H., Katija, Kakani, Seymour, Jamie, and Kiefer, Kristen (2013) Propulsion in cubomedusae: mechanisms and utility. PLoS ONE, 8 (2). e56393. pp. 1-10.

Chen, Jiandong, Waltenspiel, Bernhard, Warren, William D., and Wagner, Eric. J. (2013) Functional analysis of the integrator subunit 12 identifies a microdomain that mediates activation of the Drosophila integrator complex. Journal of Biological Chemistry, 288 (7). pp. 4867-4877.

Chua, Chia-Miin, Leggat, William, Moya, Aurelie, and Baird, Andrew (2013) Temperature affects the early life history stages of corals more than near future ocean acidification. Marine Ecology Progress Series, 475. pp. 85-92.

Cumming, Graeme S., Shepard, Eric, Okanga, Sharon, Caron, Alexandre, Ndlovu, Mduduzi, and Peters, Jeffrey L. (2013) Host associations, biogeography, and phylogenetics of avian malaria in southern African waterfowl. Parasitology, 140 (2). pp. 193-201.

Cumming, Graeme S., Ndlovu, Mduduzi, Mutumi, Gregory L., and Hockey, Philip A.R. (2013) Responses of an African wading bird community to resource pulses are related to foraging guild and food-web position. Freshwater Biology, 58 (1). pp. 79-87.

Cumming, Graeme S. (2013) Scale mismatches and reflexive law. Ecology and Society, 18 (1). 15. pp. 1-2.

Chan, Lai Yue, He, Wenjun, Tan, Ninghua, Zeng, Guangzhi, Craik, David J., and Daly, Norelle L. (2013) A new family of cystine knot peptides from the seeds of Momordica cochinchinensis. Peptides, 39. pp. 29-35.

Cooper, A., Stephens, J., Ketheesan, N., and Govan, B. (2013) Detection of Coxiella burnetii DNA in wildlife and ticks in Northern Queensland, Australia. Vector-Borne and Zoonotic Diseases, 13 (1). pp. 12-16.

Clark, Kathryn E., Capper, Angela, Della Togna, Gina, Paul, Valerie J., Romero, Luz I., Johns, Timothy, Cubilla-Rios, Luis, and Capson, Todd L. (2013) Ecology- and bioassay-guided drug discovery for treatments of tropical parasitic disease: 5α,8α-epidioxycholest-6-en-3β-ol isolated from the mollusk Dolabrifera dolabrifera shows significant activity against Leishmania donovani. Natural Product Communications, 8 (11). pp. 1537-1540.

Cheesman, Alexander W., and Winter, Klaus (2013) Growth response and acclimation of CO2 exchange characteristics to elevated temperatures in tropical tree seedlings. Journal of Experimental Botany, 64 (12). pp. 3817-3828.

Chin, Andrew (2013) Hunting porcupines... Sport Diving Magazine, 160. pp. 48-49.

Ceh, Janja, Kilburn, Matt R., Cliff, John B., Raina, Jean-Baptiste, van Keulen, Mike, and Bourne, David G. (2013) Nutrient cycling in early coral life stages: Pocillopora damicornis larvae provide their algal symbiont (Symbiodinium) with nitrogen acquired from bacterial associates. Ecology and Evolution, 3 (8). pp. 2393-2400.

Coker, Darren J., Walker, Stefan P.W., Munday, Philip L., and Pratchett, Morgan S. (2013) Social group entry rules may limit population resilience to patchy habitat disturbance. Marine Ecology Progress Series, 493. pp. 237-242.

Couturier, Christine S., Stecyk, Jonathan A.W., Rummer, Jodie L., Munday, Philip L., and Nilsson, Göran E. (2013) Species-specific effects of near-future CO₂ on the respiratory performance of two tropical prey fish and their predator. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 166 (3). pp. 482-489.

Cernusak, Lucas A., Winter, Klaus, Dalling, James W., Holtum, Joseph A.M., Jaramillo, Carlos, Korner, Christian, Leakey, Andrew D.B., Norby, Richard J., Poulter, Benjamin, Turner, Benjamin L., and Wright, S. Joseph (2013) Tropical forest responses to increasing atmospheric CO2: current knowledge and opportunities for future research. Functional Plant Biology, 40 (6). pp. 531-551.

Clements, Gopalasamy Reuben (2013) The environmental and social impacts of roads in southeast Asia. PhD thesis, James Cook University.

Cumbo, V.R., Fan, T.-Y., and Edmunds, P.J. (2012) Scleractinian corals capture zooplankton within days of settlement and metamorphosis. Coral Reefs, 31 (4). p. 1155.

Chen, Jiandong, Ezzeddine, Nader, Waltenspiel, Bernhard, Albrecht, Todd R., Warren, William D., Marzluff, William F., and Wagner, Eric J. (2012) An RNAi screen identifies additional members of the Drosophila Integrator complex and a requirement for cyclin C/Cdk8 in snRNA 3'-end formation. RNA, 18 (12). pp. 2148-2156.

Cumming, Graeme S., and Cornélis, Daniel (2012) Quantitative comparison and selection of home range metrics for telemetry data. Diversity and Distributions, 18 (11). pp. 1057-1065.

Cantacessi, Cinzia, Mulvenna, Jason, Young, Neil D., Kasny, Martin, Horak, Petr, Aziz, Ammar, Hofmann, Andreas, Loukas, Alex, and Gasser, Robin B. (2012) A deep exploration of the transcriptome and "excretory/secretory" proteome of adult Fascioloides magna. Molecular and Cellular Proteomics, 11 (11). pp. 1340-1353.

Caron, Alexandre, de Garine-Wichatitsky, Michel, Ndlovu, Mduduzi, and Cumming, Graeme S. (2012) Linking avian communities and avian influenza ecology in southern Africa using epidemiological functional groups. Veterinary Research, 43 (1). pp. 1-11.

Cumming, Graeme S., Southworth, Jane, Rondon, Xanic J., and Marsik, Matthew (2012) Spatial complexity in fragmenting Amazonian rainforests: do feedbacks from edge effects push forests towards an ecological threshold? Ecological Complexity, 11. pp. 67-74.

Cumming, Graeme S., Gaidet, Nicolas, and Ndlovu, Mduduzi (2012) Towards a unification of movement ecology and biogeography: conceptual framework and a case study on Afrotropical ducks. Journal of Biogeography, 39 (8). pp. 1401-1411.

Cumming, Graeme S., Paxton, Mark, King, Jackie, and Beuster, Hans (2012) Foraging guild membership explains variation in waterbird responses to the hydrological regime of an arid-region flood-pulse river in Namibia. Freshwater Biology, 57 (6). pp. 1202-1213.

Cantacessi, Cinzia, Campbell, Bronwyn E., and Gasser, Robin B. (2012) Key strongylid nematodes of animals: impact of next-generation transcriptomics on systems biology and biotechnology. Biotechnology Advances, 30 (3). pp. 469-488.

Cantacessi, C., Campbell, B.E., Jex, A.R., Young, N.D., Hall, R.S., Ranganathan, S., and Gasser, R.B. (2012) Bioinformatics meets parasitology. Parasite Immunology, 34 (5). pp. 265-275.

Cole, Andrew J., Lawton, Rebecca J., Wilson, Shaun K., and Pratchett, Morgan S. (2012) Consumption of tabular acroporid corals by reef fishes: a comparison with plant–herbivore interactions. Functional Ecology, 26 (2). pp. 307-316.

Clark, Richard J., Akcan, Muharrem, Kaas, Quentin, Daly, Norelle L., and Craik, David J. (2012) Cyclization of conotoxins to improve their biopharmaceutical properties. Toxicon, 59 (4). pp. 446-455.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2012) Patterns of migration between feeding and spawning sites in a coral reef surgeonfish. Coral Reefs, 31 (1). pp. 77-87.

Connolly, Sean R., and Thibaut, Loic M. (2012) A comparative analysis of alternative approaches to fitting species-abundance models. Journal of Plant Ecology, 5 (1). pp. 32-45.

Cantacessi, Cinzia, and Gasser, Robin B. (2012) SCP/TAPS proteins in helminths: where to from now. Molecular and Cellular Probes, 26. pp. 54-59.

Chapman, Tarryn, Rymer, Tasmin, and Pillay, Neville (2012) Behavioural correlates of urbanisation in the Cape ground squirrel Xerus inauris. Naturwissenschaften, 99 (11). pp. 893-902.

Ceh, Janja, Raina, Jean-baptiste, Soo, Rochelle M., van Keulen, Mike, and Bourne, David G. (2012) Coral-bacterial communities before and after a coral mass spawning event on Ningaloo Reef. PLoS One, 7 (5). pp. 1-7.

Chua, Chia-Miin, Schupp, Peter, Leggat, William, and Baird, Andrew (2012) Effects of ocean acidification on metamorphosis: brooding and spawning larvae. In: Proceedings of the 12th International Coral Reef Symposium. 8D_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Chan, Neil C. S., Connolly, Sean R., and Mapstone, Bruce D. (2012) Effects of sex change on the implications of marine reserves for fisheries. Ecological Applications, 22 (3). pp. 778-791.

Collins, Andrew, Gutièrrez-Mecinas, María, Trollope, Alexandra F., and Reul, Johannes M.H.M. (2012) Epigenetics of stress. In: Párrizas, Marcelina, Gasa, Rosa, and Kaliman, Perla, (eds.) Epigenetics of Lifestyle. Bentham Science, Sharjah, Unites Arab Emirates, pp. 70-89.

Choat, Brendan, Jansen, Steven, Brodribb, Tim J., Cochard, Hervé, Delzon, Sylvain, Bhaskar, Radika, Bucci, Sandra J., Feild, Taylor, Gleason, Sean M., Hacke, Uwe G., Jacobsen, Anna L., Lens, Frederic, Maherali, Hafiz, Martinez-Vilalta, Jordi, Mayr, Stefan, Mencuccini, Maurizio, Mitchell, Patrick J., Nardini, Andrea, Pittermann, Jarmila, Pratt, R. Brandon, Sperry, John S., Westoby, Mark, Wright, Ian J., and Zanne, Amy E. (2012) Global convergence in the vulnerability of forests to drought. Nature, 491 (7426). pp. 752-756.

Cantacessi, Cinzia, Hofmann, Andreas, Young, Neil D., Broder, Ursula, Hall, Ross S., Loukas, Alex, and Gasser, Robin B. (2012) Insights into SCP/TAPS proteins of liver flukes based on large-scale bioinformatic analyses of sequence datasets. PLoS ONE, 7 (2). e31164. pp. 1-8.

Carrette, Teresa J., Underwood, Avril H., and Seymour, Jamie E. (2012) Irukandji syndrome: a widely misunderstood and poorly researched tropical marine envenoming. Diving and Hyperbaric Medicine, 42 (4). pp. 214-223.

Cetina Heredia, Paulina (2012) Modelling physical and biological drivers of larval retention in reef systems. PhD thesis, James Cook University.

Choat, John H., Klanten, Oya. S., Van Herwerden, Lynne, Robertson, D. Ross, and Clements, Kendall D. (2012) Patterns and processes in the evolutionary history of parrotfishes (Family Labridae). Biological Journal of the Linnean Society, 107 (3). pp. 529-557.

Conibear, Anne C., Daly, Norelle L., and Craik, David J. (2012) Quantification of small cyclic disulfide-rich peptides. Peptide Science, 98 (6). pp. 518-524.

Carón, A., Cumming, G.S., Mundava, J., Chiweshe, N., Mundy, P., and de Garine-Wichatitsky, M. (2012) Report on a five-year avian influenza survey in the manyame catchment. Honeyguide, 58 (2). pp. 113-120.

Carter, Alecia J., and Feeney, William E. (2012) Taking a comparative approach: analysing personality as a multivariate behavioural response across species. PLoS One, 7 (7). e42440. pp. 1-9.

Chua, Chia-Miin (2012) The effects of ocean acidification and warming on the early life history stages of corals. PhD thesis, James Cook University.

Cantacessi, Cinzia, Gasser, Robin B., Strube, Christina, Schnieder, Thomas, Jex, Aaron R., Hall, Ross S., Campbell, Bronwyn E., Young, Neil D., Ranganathan, Shoba, Sternberg, Paul W., and Mitreva, Makedonka (2011) Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention. Biotechnology Advances, 29 (3). pp. 261-271.

Cerqueira, Gustavo M., and Peleg, Anton Y. (2011) Insights into Acinetobacter baumannii pathogenicity. IUBMB Life, 63 (12). pp. 1055-1060.

Cumming, Graeme S. (2011) Spatial resilience in social-ecological systems. Springer, New York, NY, USA, pp. 1-254.

Cao, Zhen Fang Huang , Burdakov, Denis , and Sarnyai, Zoltán (2011) Optogenetics: potentials for addiction research. Addiction Biology, 6 (4). pp. 519-531.

Cumming, Graeme S., and Ndlovu, Mduduzi (2011) Satellite telemetry of Afrotropical ducks: methodological details and assessment of success rates. African Zoology, 46 (2). pp. 425-434.

Cumming, Graeme S. (2011) Spatial resilience: integrating landscape ecology, resilience, and sustainability. Landscape Ecology, 26 (7). pp. 899-909.

Cripps, Ingrid, Munday, Philip L., and McCormick, Mark I. (2011) Ocean acidification affects prey detection by a predatory reef fish. PLoS One, 6 (7). e22736. pp. 1-7.

Caron, Alexandre, Abolnik, Celia, Mundava, Josephine, Gaidet, Nicolas, Burger, Christina E., Mochotlhoane, Bontsi, Bruinzeel, Leo, Chiweshe, Ngoni, de Garine-Wichatitsky, Michel, and Cumming, Graeme S. (2011) Persistence of low pathogenic avian influenza virus in waterfowl in a southern African ecosystem. EcoHealth, 8 (1). pp. 109-115.

Cumming, Graeme S., Caron, Alexandre, Abolnik, Celia, Cattoli, Giovanni, Bruinzeel, Leo W., Burger, Christina E., Cecchettin, Krizia, Chiweshe, Ngoni, Mochotlhoane, Bontsi, Mutumi, Gregory L., and Ndlovu, Mduduzi (2011) The ecology of influenza A viruses in wild birds in Southern Africa. EcoHealth, 8 (1). pp. 4-13.

Crisp, Michael D., Burrows, Geoffrey E., Cook, Lyn G., Thornhill, Andrew H., and Bowman, David M.J.S. (2011) Flammable biomes dominated by eucalypts originated at the Cretaceous–Palaeogene boundary. Nature Communications, 2. 193. pp. 1-8.

Cumming, Graeme S. (2011) The resilience of big river basins. Water International, 36 (1). pp. 63-95.

Cerqueira, Gustavo M., Souza, Natalie M., Araújo, Eduardo R., Barros, Aline T., Morais, Zenaide M., Vasconcellos, Sílvio A., and Nascimento, Ana L.T.O. (2011) Development of transcriptional fusions to assess Leptospira interrogans promoter activity. PLoS ONE, 6. e17409. pp. 1-16.

Cole, Andrew (2011) Energetic costs of chronic fish predation on reef-building corals. PhD thesis, James Cook University.

Cernusak, Lucas A., Hutley, Lindsay B., Beringer, Jason, Holtum, Joseph A.M., and Turner, Benjamin L. (2011) Photosynthetic physiology of eucalypts along a sub-continental rainfall gradient in northern Australia. Agricultural and Forest Meteorology, 151 (11). 1462-1470.

Chong-Seng, K.M., Cole, A.J., Pratchett, M.S., and Willis, B.L. (2011) Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease. Coral Reefs, 30 (2). pp. 473-481.

Clode, P.L., Lema, K., Saunders, M., and Weiner, S. (2011) Skeletal mineralogy of newly settling Acropora millepora (Scleractinia) coral recruits. Coral Reefs, 30 (1). pp. 1-8.

Collier, John, and Cumming, Graeme (2011) A dynamical approach to ecosystem identity. In: deLaplante, Kevin, Brown, Bryson, and Peacock, Kent A., (eds.) Philosophy of Ecology. Handbook of the Philosophy of Science, 11 . Elsevier, Oxford, UK, pp. 201-218.

Cumbo, Vivian Ruth (2011) The establishment and development of symbiosis in coral larvae. PhD thesis, James Cook University.

Cooper, W.E., and de Boer, H.J. (2011) A taxonomic revision of Trichosanthes L. (Cucurbitaceae) in Australia, including one new species from the Northern Territory. Austrobaileya, 8 (3). pp. 364-386.

Cantacessi, Cinzia, Young, Neil D., Nejsum, Peter, Jex, Aaron R., Campbell, Bronwyn E., Hall, Ross S., Thamsborg, Stig M., Scheerlinck, Jean-Peirre, and Gasser, Robin B. (2011) The transcriptome of Trichuris suis: first molecular insights into a parasite with curative properties for key immune diseases of humans. PLoS ONE, 6 (8). e23590. pp. 1-10.

Ceccarelli, F. Sara (2010) New species of ant-mimicking jumping spiders of the genus Myrmarachne MacLeay, 1839 (Araneae: Salticidae) from north Queensland, Australia. Australian Journal of Entomology, 49 (3). pp. 245-255.

Collier, Catherine J., Prado, Patricia, and Lavery, Paul S. (2010) Carbon and nitrogen translocation in response to shading of the seagrass Posidonia sinuosa. Aquatic Botany, 93 (1). pp. 47-54.

Chakrabarti, Lisa , Zahra, Rabaab, Jackson, Stephen M., Kazemi-Esfarjani, Parsa, Sopher, Bryce L., Mason, Amanda G., Toneff, Thomas , Ryu, Soyoung, Shaffer, Scott, Kansy, Janice W., Eng, Jeremiah, Merrihew, Gennifer, MacCoss, Michael J., Murphy, Anne, Goodlett, David R., Hook, Vivian, Bennett, Craig L., Pallanck, Leo J., and La Spada, Albert R. (2010) Mitochondrial dysfunction in NnaD mutant flies and Purkinje cell degeneration mice reveals a role for Nna proteins in neuronal bioenergetics. Neuron, 66 (6). pp. 835-847.

Cole, A.J, Pratchett, M.S., and Jones, G.P. (2010) Corallivory in tubelip wrasses: diet, feeding and trophic importance. Journal of Fish Biology, 76 (4). pp. 818-835.

Coates, John M., Gurnell, Mark, and Sarnyai, Zoltan (2010) From molecule to market: steroid hormones and financial risk-taking. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1538). pp. 331-343.

Cerqueira, Gustavo M., McBride, Alan J.A., Queiroz, Adriano, Pinto, Luciano S., Silva, Éverton F., Hartskeerl, Rudy A., Reis, Mitermayer G., Ko, Albert I., and Dellagostin, Odir A. (2010) Monitoring Leptospira strain collections: the need for quality control. American Journal of Tropical Medicine and Hygiene, 82 (1). pp. 83-87.

Cvitanovic, C., and Hoey, A.S. (2010) Benthic community composition influences within-habitat variation in macroalgal browsing on the Great Barrier Reef. Marine and Freshwater Research, 61 (9). pp. 999-1005.

Cerqueira, Gustavo M., McBride, Alan J.A., Hartskeerl, Rudy A., Ahmed, Nyiaz, Dellagostin, Odir A., Eslabão, Marcus R., and Nascimento, Ana L.T. (2010) Bioinformatics describes novel Loci for high resolution discrimination of leptospira isolates. PLoS ONE, 5. e15335. pp. 1-7.

Cantacessi, Cinzia, Mitreva, Makedonka, Campbell, Bronwyn E., Hall, Ross S., Young , Neil D., Jex, Aaron R., Ranganathan, Shoba, and Gasser, Robin B. (2010) First transcriptomic analysis of the economically important parasitic nematode, Trichostrongylus colubriformis, using a next-generation sequencing approach. Infection, Genetics and Evolution, 10 (8). pp. 1199-1207.

Clark, Timothy Darren, Rummer, J.L., Sepulveda, C.A., Farrell, A.P., and Brauner, C.J. (2010) Reduced and reversed temperature dependence of blood oxygenation in an ectothermic scombrid fish: implications for the evolution of regional heterothermy? Journal of Comparative Physiology B: Biochemical Systemic and Environmental Physiology, 180. pp. 73-82.

Craven, Andrea (2010) A life submerged in sound: determining if aquaculture sounds induce stress in fish. Masters (Research) thesis, James Cook University.

Cantacessi, Cinzia, Jex, Aaron R., Hall, Ross S., Young, Neil D., Campbell, Bronwyn E., Joachim, Anja, Nolan, Matthew J., Abubucker, Sahar, Sternberg, Paul W., Ranganatha, Shoba, Mitreva , Makedonka, and Gasser, Robin B. (2010) A practical, bioinformatic workflow system for large datasets generated by next-generation sequencing. Nucleic Acids Research, 38 (17). e171. pp. 1-12.

Camus, Thomas, Zeng, Chaoshu, and McKinnon, A. David (2009) Egg production, egg hatching success and population increase of the tropical paracalanid copepod, Bestiolina similis (Calanoida: Paracalanidae) fed different microalgal diets. Aquaculture, 297 (1). pp. 169-175.

Crozier, Ross (2009) Comments on the proposed conservation of Termes serratus Froggatt, 1898 and Termes serrula Desneux, 1904 (Insecta, Isoptera, TERMITINAE) 4 (CASE 3385). Bulletin of Zoological Nomenclature, 66 (4). p. 347.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2009) Coral bleaching and habitat degradation increase susceptibility to predation for coral-dwelling fishes. Behavioral Ecology, 20 (6). pp. 1204-1210.

Cho, Hyun-jung, Staikopoulos, Vasiliki, Ivanusic, Jason J., and Jennings, Ernest A. (2009) Hyperpolarization-activated cyclic-nucleotide gated 4 (HCN4) protein is expressed in a subset of rat dorsal root and trigeminal ganglion neurons. Cell and Tissue Research, 338 (2). pp. 171-177.

Cerqueira, Gustavo M., McBride, Alan J.A., Picardeau, Mathieu, Ribeiro, Samuel G., Moreira, Ângela N., Morel, Viviane, Reis, Mitermayer G., Ko, Albert I., and Dellagostin, Odir A. (2009) Distribution of the leptospiral immunoglobulin-like (lig) genes in pathogenic Leptospira species and application of ligB to typing leptospiral isolates. Journal of Medical Microbiology, 58. pp. 1173-1181.

Camacho , Regina, Boyero, Luz, Cornejo, Aydee, Ibanez, Alicia, and Pearson, Richard G. (2009) Local variation in shredder distribution can explain their oversight in tropical streams. Biotropica, 41 (5). pp. 625-632.

Cerqueira, Gustavo M., and Picardeau, Mathieu (2009) A century of Leptospira strain typing. Infection, Genetics and Evolution, 9 (5). pp. 760-768.

Cho, H-J., Staikopoulos, V., Furness, J.B., and Jennings, E.A. (2009) Inflammation-induced increase in hyperpolarization-activated, cyclic nucleotide-gated channel protein in trigeminal ganglion neurons and the effect of buprenorphine. Neuroscience, 162 (2). pp. 453-461.

Cerqueira, G., Silva, E., Seixas, F., Athanazio, D., Amaral, M., Vasconcelos, F., Hartwig, D., Ribeiro, S., and Dellagostin, O. (2009) Use of naked DNA immunization for screening of leptospiral antigens as potential vaccinogens. International Journal of Antimicrobial Agents, 34 (Supplement 2). P162. S78 - S78.

Carfarchia, Claudia, Otranto, Domenico, Weigl, Stephania, Campbell, Bronwyn E., Parisi, Antonio, Cantacessi, Cinzia, Mancianti, Francesca , Danesi, Patrizia , and Gasser, Robin B. (2009) Molecular characterization of selected dermatophytes and their identification by electrophoretic mutation scanning. Electrophoresis, 30 (20). pp. 3555-3564.

Cantacessi, C., Zou, F.C., Hall, R.S., Zhong, W., Jex, A.R., Campbell, B.E., Ranganathan, S., Sternberg, P.W., Zhu, X.Q., and Gasser, R.B. (2009) Bioinformatic analysis of abundant, gender-enriched transcripts of adult Ascaris suum (Nematoda) using a semi-automated workflow platform. Molecular and Cellular Probes, 23 (5). pp. 205-217.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Coral-feeding wrasse scars massive Porites colonies. Coral Reefs, 28 (1). p. 207.

Cinner, Joshua E., McClanahan, Timothy R., Daw, Tim M., Graham, Nicholas A.J., Maina, Joseph, Wilson, Shaun K., and Hughes, Terence P. (2009) Linking social and ecological systems to sustain coral reef fisheries. Current Biology, 19 (3). pp. 206-212.

Camus, Thomas, and Zeng, Chaoshu (2009) The effects of stocking density on egg production and hatching success, cannibalism rate, sex ratio and population growth of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 287 (1). pp. 145-151.

Cantacessi, C., Loukas, A., Campbell, B.E., Mulvenna, J., Ong, E.K., Zhong, W., Sternberg, P.W., Otranto, D., and Gasser, R.B. (2009) Exploring transcriptional conservation between Ancylostoma caninum and Haemonchus contortus by oligonucleotide microarray and bioinformatic analyses. Molecular and Cellular Probes, 23 (1). pp. 1-9.

Ceccarelli, Fadia Sara (2009) Ant-mimicking spider, Myrmarachne species (Araneae : Salticidae), distinguishes its model, the green ant, Oecophylla smaragdina, from a sympatric Batesian O. smaragdina mimic, Riptortus serripes (Hemiptera : Alydidae). Australian Journal of Zoology, 57 (5). pp. 305-309.

Coker, D.J., Pratchett, M.S., and Munday, P.L. (2009) Does body colouration influence predation risk of coral dwelling reef fish in bleached landscapes? In: Proceedings of the 11th Coral Reef Symposium. pp. 1281-1285. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Crozier, Ross H. (2009) Evolving sterility: Darwin and his successors. In: Australian Entomological Society’s 40th AGM & Scientific Conference / Society of Australian Systematic Biologists / 9th Invertebrate Biodiversity & Conservation Conference. p. 1. From: Australian Entomological Society’s 40th AGM & Scientific Conference / Society of Australian Systematic Biologists / 9th Invertebrate Biodiversity & Conservation Conference, 25-28 SEP 2009, Darwin, NT, Australia. (Unpublished)

Chan, Lai Y., Wang, Conan K.L., Major, Jodie M., Greenwood, Kathryn P., Lewis, Richard J., Craik, David J., and Daly, Norelle L. (2009) Isolation and characterization of peptides from Momordica cochinchinensis seeds. Journal of Natural Products, 72 (8). pp. 1453-1458.

Connolly, Sean R. (2009) Macroecological theory and the analysis of species richness gradients. In: Witman, Jon D., and Roy, Kaustuv, (eds.) Marine Macroecology. University Of Chicago , Chicago, USA, pp. 279-309.

Cairns, Andi, and Wells, Alice (2008) Contrasting modes of handling moss for feeding and case-building by the caddisfly Scelotrichia willcairnsi (Insecta: Trichoptera). Journal of Natural History, 42 (41-42). pp. 2609-2615.

Cole, Andrew J., Pratchett, Morgan S., and Jones, Geoffrey P. (2008) Diversity and functional importance of coral-feeding fishes on tropical coral reefs. Fish and Fisheries, 9. pp. 286-307.

Camus, Thomas, and Zeng, Chaoshu (2008) Effects of photoperiod on egg production and hatching success, naupliar and copepodite development, adult sex ratio and life expectancy of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 280 (1-4). pp. 220-226.

Cantacessi, Cinzia, Traversa, Donato, Testini, Gabriella, Lia, Riccardo Paulo, Carfarchia, Claudia, Maca, Jan, and Otranto, Domenico (2008) Molecular identification of Phortica variegata and Phortica semivirgo (Drosophilidae, Steganinae) by PCR-RFLP of the mitochondrial cytochrome oxidase c subunit I gene. Parasitology Research, 103 (3). pp. 727-730.

Cemazar, Masa, Joshi, Ajinkya, Daly, Norelle L., Mark, Alan E., and Craik, David J. (2008) The structure of a two-disulfide intermediate assists in elucidating the oxidative folding pathway of a cyclic cystine knot protein. Structure, 16 (6). pp. 842-851.

Christidis, Faye, and Dean, John C. (2008) Phylogeny and distribution of the mayfly genus Austrophlebioides Campbell & Suter (Ephemeroptera: Leptophlebiidae). Invertebrate Systematics, 22 (1). pp. 29-36.

Clark, Richard J., Daly, Norelle L., Halai, Reena, Nevin, Simon T., Adams, David J., and Craik, David J. (2008) The three-dimensional structure of the analgesic α-conotoxin, RgIA. FEBS Letters, 582 (5). pp. 597-602.

Crozier, Ross H. (2008) Advanced eusociality, kin selection and male haploidy. Australian Journal of Entomology, 47 (1). pp. 2-8.

Ceccarelli, Fadia Sara (2008) Behavioral mimicry in Myrmarachne species (Araneae, Salticidae) from North Queensland, Australia. Journal of Arachnology, 36 (2). pp. 344-351.

Connolly, Niall M., Christidis, Faye, McKie, Brendan, Boyero, Luz, and Pearson, Richard (2008) Diversity of invertebrates in wet tropics streams: patterns and processes. In: Stork, Nigel E., and Turton, Stephen M., (eds.) Living in a Dynamic Tropical Forest Landscape. Blackwell Publishing, Carlton, VIC, Australia, pp. 161-177.

Crozier, Ross H., and Schluns, Helge (2008) Genetic caste determination in termites: out of the shade but not from Mars. BioEssays, 30 (4). pp. 299-302.

Cantacessi, Cinzia, Riddell, Shane, Morris, Genevieve M., Doran, Timothy, Woods, Wayne G., Otranto, Domenico, and Gasser, Robin B. (2008) Genetic characterization of three unique operational taxonomic units of Eimeria from chickens in Australia based on nuclear spacer ribosomal DNA. Veterinary Parasitology, 152 (3-4). pp. 226-234.

Couper, Patrick J., and Hoskin, Conrad J. (2008) Litho-refugia: the importance of rock landscapes for the long-term persistence of Australian rainforest fauna. Australian Zoologist, 34 (4). pp. 554-560.

Chong, Caroline (2008) A riparian perspective on species ecology and evolution: Melaleuca leucadendra (Myrtaceae). PhD thesis, James Cook University.

Cappo, Mike, De'ath, Glenn, and Speare, Peter (2007) Inter-reef vertebrate communities of the Great Barrier Reef Marine Park determined by baited remote underwater video stations. Marine Ecology Progress Series, 350. pp. 209-221.

Carter, David O., Yellowlees, David, and Tibbett, Mark (2007) Autoclaving kills soil microbes yet soil enzymes remain active. Pedobiologia, 51 (4). pp. 295-299.

Couper, Patrick J., Keim, Lauren D., and Hoskin, Conrad J. (2007) A new velvet Gecko (Gekkonidae: Oedura) from south-east queensland, Australia. Zootaxa, 1587. pp. 27-41.

Cantin, Neal E., Negri, Andrew P., and Willis, Bette L. (2007) Photoinhibition from chronic herbicide exposure reduces reproductive output of reef-building corals. Marine Ecology Progress Series, 344. pp. 81-93.

Chong, Youmie, Hayes, Jessica L., Sollod, Brianna, Wen, Suping, Wilson, David T., Hains, Peter G., Hodgson, Wayne C., Broady, Kevin W., King, Glenn F., and Nicholson, Graham M . (2007) The omega-atracotoxins: selective blockers of insect M-LVA and HVA calcium channels. Biochemical Pharmacology, 74 (4). pp. 623-638.

Chong, Caroline, Edwards, Will, and Waycott, Michelle (2007) Differences in resprouting ability are not related to seed size or seedling growth in four riparian woody species. Journal of Ecology, 95 (4). pp. 840-850.

Campbell, Stuart J., Pratchett, Morgan S., Anggoro, Aji W., Ardiwijaya, Rizya L, Fadli, Nur, Herdiana, Yudi, Kartawijaya, Tasrif, Mahyiddin, Dodent, Mukminin, Ahmad, Pardede, Shinta T., Rudi, Edi, Siregar, Achis M., and Baird, Andrew H. (2007) Disturbance to coral reefs in Aceh, Northern Sumatra: impacts of the Sumatra-Andaman tsunami and pre-tsunami degradation. Atoll Research Bulletin, 544. pp. 55-78.

Crowther, Robert G., Spinks, Warwick L., Leicht, Anthony S., Quigley, Frank, and Golledge, Jonathan (2007) Relationship between temporal-spatial gait parameters, gait kinematics, walking performance, exercise capacity, and physical activity level in peripheral arterial disease. Journal of Vascular Surgery, 45 (6). pp. 1172-1178.

Crowther, Robert G., Spinks, Warwick L., Leicht, Anthony S., and Spinks, Christopher D. (2007) Kinematic responses to plyometric exercises conducted on compliant and noncompliant surfaces. Journal of Strength and Conditioning Research, 21 (2). pp. 460-465.

Copp, J.N., Roberts, A.A., Marahiel, M.A., and Neilan, B.A. (2007) Characterization of PPTNs, a cyanobacterial phosphopantetheinyl transferase from Nodularia spumigena NSOR10. Journal of Bacteriology, 189 (8). pp. 3133-3139.

Carter, David O., Yellowlees, David, and Tibbett, Mark (2007) Cadaver decomposition in terrestrial ecosystems. Naturwissenschaften, 94 (1). pp. 12-24.

Ceccarelli, F.S., and Crozier, R.H. (2007) Dynamics of the evolution of Batesian mimicry: molecular phylogenetic analysis of ant-mimicking Myrmarachne (Araneae: Salticidae) species and their ant models. Journal of Evolutionary Biology, 20 (1). pp. 286-295.

Crozier, Y. Ching, Jia, Xiao Cheng, Yao, Jin Yan, Field, Ashley R., Cook, James M., and Crozier, Ross H. (2007) Microsatellite primers for Ficus racemosa and Ficus rubiginosa. Molecular Ecology Notes, 7 (1). pp. 57-59.

Ceccarelli, F. Sara (2007) Contact between Myrmarachne (Araneae: Salticidae) and ants. Bulletin of the British Arachnological Society, 14 (2). pp. 54-58.

Crozier, Ross (2006) Charting uncertainty about ant origins. Proceedings of the National Academy of Sciences of the United States of America, 103 (48). pp. 18029-18030.

Crowe, Melissa J., Leicht, Anthony S., and Spinks, Warwick L. (2006) Physiological and cognitive responses to caffeine during repeated, high-intensity exercise. International Journal of Sport Nutrition and Exercise Metabolism, 16 (5). pp. 528-544.

Crayn, Darren M., Rossetto, Maurizio, and Maynard, David J. (2006) Molecular phylogeny and dating reveals an Oligo-Miocene radiation of dry-adapted shrubs (Tremandraceae) from rainforest tree progenitors (Elaeocarpaceae) in Australia. American Journal of Botany, 93 (9). pp. 1328-1342.

Caldwell, Susan, Rummer, Jodie L., and Brauner, Colin J. (2006) Blood sampling techniques and storage duration: Effects on the presence and magnitude of the red blood cell β-adrenergic response in rainbow trout (Oncorhynchus mykiss). Comparative Biochemistry and Physiology-Part A: molecular & integrative physiology, 144 (2). pp. 188-195.

Coughlan, J.P., Seymour, J., and Cross, T.F. (2006) Isolation and characterization of seven polymorphic microsatellite loci in the box jellyfish (Chironex fleckeri, Cubozoa, Cnidaria). Molecular Ecology Notes, 6 (1). pp. 41-43.

Catches, Justin S., Burns, Julie M., Edwards, Susan L., and Claiborne, James B. (2006) Na+/H+ antiporter, V-H+-ATPase and Na+/K+-ATPase immunolocalization in a marine teleost (Myoxocephalus octodecemspinosus). Journal of Experimental Biology, 209. pp. 3440-3447.

Clarke, Charles, Lee, Ch'ien, and McPherson, Stewart (2006) Nepenthes chaniana (Nepenthaceae), a new species from north-western Borneo. Sabah Parks Nature Journal, 7. pp. 53-66.

Clarke, Charles, and Kruger, Rodney (2006) Nepenthes tenax C. Clarke & R. Kruger (Nepenthaceae), a new species from Cape York Peninsula, Queensland. Austrobaileya, 7 (2). pp. 319-324.

Cochard, R., and Jackes, B.R. (2005) Seed ecology of the invasive tropical tree Parkinsonia aculeata. Plant Ecology, 180 (1). pp. 13-31.

Connolly, Sean R., Hughes, Terry P., Bellwood, David R., and Karlson, Ronald H. (2005) Community structure of corals and reef fishes at multiple scales. Science, 309 (5739). pp. 1363-1365.

Cameron, Stephen, Pereira, Peter, Mulcahy, Richard, and Seymour, Jamie (2005) Helicopter primary retrieval: tasking who should do it? Emergency Medicine Australasia, 17 (4). pp. 387-391.

Crossman, David J., Choat, J. Howard, and Clements, Kendall D. (2005) Nutritional ecology of nominally herbivorous fishes on coral reefs. Marine Ecology Progress Series, 296. pp. 129-142.

Connolly, Sean R. (2005) Process-based models of species distributions and the mid-domain effect. American Naturalist, 166 (1). pp. 1-11.

Capper, Angela, Tibbetts, Ian R., O’Neil, Judith M., and Shaw, Glendon R. (2005) The fate of Lyngbya majuscula toxins in three potential consumers. Journal of Chemical Ecology, 31 (7). pp. 1595-1606.

Cheshire, Kim, Boyero, Luz, and Pearson, Richard G. (2005) Food webs in tropical Australian streams: shredders are not scarce. Freshwater Biology, 50 (5). pp. 748-769.

Christidis, Faye, and Dean, John C. (2005) Three new species of Austrophlebioides Campbell and Suter (Ephemeroptera: Leptophlebiidae: Atalophlebiinae) from the Wet Tropics bioregion of north-eastern Australia. Australian Journal of Entomology, 44 (2). pp. 132-143.

Clouse, Ron, Janies, Daniel, and Kerr, Alexander M. (2005) Resurrection of Bohadschia bivittata from B. marmorata (Holothuroidea: Holothuriidae) based on behavioral, morphological, and mitochondrial DNA evidence. Zoology, 108 (1). pp. 27-39.

Carrette, T., and Seymour, J. (2005) Vascular dopplers: a new way of recording cardiac parameters in envenomed organisms. Toxicon, 45 (4). pp. 541-544.

Crozier, Ross H., Dunnett, Lisa J., and Agapow, Paul-Michael (2005) Phylogenetic biodiversity assessment based on systematic nomenclature. Evolutionary Bioinformatics Online, 1. pp. 11-36.

Christidis, Faye (2005) Phylogenetic relationships of the Australian Leptophlebiide (Ephemeroptera). Invertebrate Systematics, 19 (6). pp. 531-539.

Cheun, Carol C., Martin, Ian C.A., Zenger, Kyall R., Donald, Jenny A., Thomson, Peter C., Moran, Christopher, and Buckley, Michael F. (2004) Quantitative trait loci for steady-state platelet count in mice. Mammalian Genome, 15 (10). pp. 784-797.

Connolly, N. M., Crossland, M.R., and Pearson, R.G. (2004) Effect of low dissolved oxygen on survival, emergence, and drift of tropical stream macroinvertebrates. Journal of the North American Benthological Society, 23 (2). pp. 251-270.

Carton, Alexander G., and Montgomery, John C. (2004) A comparison of lateral line morphology of blue cod and torrentfish: two sandperches of the family Pinguipedidae. Environmental Biology of Fishes, 70 (2). pp. 123-131.

Chen, Ming-gang, Chang, Zheng-shan, Cui, Ai-li, Blair, David, Zhang, Yong-nian, Chen, Shao-hong, and Feng, Zheng (2004) DNA sequences of Paragonimus skrjabini populations from five provinces in China. Chinese Medical Journal, 117 (2). pp. 219-224.

Corlis, David (2004) Four new genera of monogenea (Dactylogridae) from the gills of Australian atheriniform freshwater fishes. Memoirs of the Queensland Museum, 49 (2). pp. 537-572.

Corlis, David Brian (2004) Taxonomy of monogenean parasites and their coevolution with Australian atheriniform fishes. PhD thesis, James Cook University.

Caley, M. Julian, and Munday, Philip L. (2003) Growth trades off with habitat specialization. Proceedings of the Royal Society of London Series B, Biological Sciences, 270 (52). pp. 175-177.

Canzano, Andrea A., Jones, Rhondda E., and Seymour, Jamie E. (2003) Diapause termination in two species of tropical butterfly, Euploea core (Cramer) and Euploea sylvester (Fabricius) (Lepidoptera: Nymphalidae). Australian Journal of Entomology, 42 (4). pp. 352-356.

Carton, A.G., and Montgomery, J. C. (2003) Evidence of a rheotactic component in the odour search behaviour of freshwater eels. Journal of Fish Biology, 62 (3). pp. 501-516.

Cui, Ai-li, Chang, Zheng-shan, Chen, Ming-gang, Blair, David, Chen, Shao-hong, Zhang, Yong-nian, and Feng, Zheng (2003) Taxonomic status in DNA sequences of five species of genus Paragonimus. Chinese Journal of Parasitology and Parasitic Diseases, 21 (1). pp. 27-30.

Carter, David O., and Tibbett, Mark (2003) Taphonomic mycota: fungi with forensic potential. Journal of Forensic Sciences, 48 (1). pp. 168-171.

Castell, Laura (2003) Marine gastropods. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Fishing New Books, pp. 467-487.

Clarke, Cathryn L., and Klussmann-Kolb, Annette (2003) Parasitic copepods in the sea hare Dolabrifera brazieri (Gastropoda: Opisthobranchia: Anaspidea). Journal of the Marine Biological Association of the United Kingdom, 83 (4). pp. 793-796.

Christidis, Faye (2003) Systematics, phylogeny and ecology of Australian Leptophlebiidae (Ephemeroptera). PhD thesis, James Cook University.

Choat, J. Howard, and Robertson, D. Ross (2002) Age-based studies. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 57-80.

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Doanh, Pham Ngoc, Tu, Luu Anh, Hien, Hoang Van, Duc, Nguyen Van, Horii, Yoichiro, Blair, David, and Nawa, Yukifumi (2018) First intermediate hosts of Paragonimus spp. in Vietnam and identification of intramolluscan stages of different Paragonimus species. Parasites & Vectors, 11. 328.

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Doma, Kenji, Leicht, Anthony, Sinclair, Wade, Schumann, Moritz, Damas, Felipe, Burt, Dean, and Woods, Carl (2018) The impact of exercise-induced muscle damage on performance test outcomes in elite female basketball players. Journal of Strength and Conditioning Research, 32 (6). pp. 1731-1738.

da Silva, Juliano Fernandes, Nakamura, Fabio Yuzo, Carminatti, Lorival José, Cetolin, Tiago, Ortiz, Jaelson, Teixeira, Rodrigo Mendonça, Alcantâra, Chellsea Hortêncio, and Guglielmo, Luiz Guilherme Antonacci (2017) The peak velocity of Carminatti's test for aerobic-fitness training in male soccer players. Revista Brasileira de Cineantropometria e Desempenho Humano, 19 (6). pp. 652-662.

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Dagonnier, Marie, Cooke, Ira Robin, Faou, Pierre, Sidon, Tara Kate, Dewey, Helen Margaret, Donnan, Geoffrey Alan, and Howells, David William (2017) Discovery and longitudinal evaluation of candidate biomarkers for ischaemic stroke by mass spectrometry-based proteomics. Biomarker Insights, 12.

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de Carvalho, Emanuel Messias Oliveira, Leicht, Anthony Scott, Nakamura, Fabio Yuzo, Okuno, Nilo Massaru, and Okazaki, Victor Hugo Alves (2017) Team statistical determinants of victory in Brazilian basketball. MOJ Sports Medicine, 1 (4). 00018. pp. 1-7.

Doma, Kenji, Schumann, Moritz, Leicht, Anthony, Heilbronn, Brian, Damas, Felipe, and Burt, Dean (2017) The repeated bout effect of traditional resistance exercises on running performance across three bouts. Applied Physiology, Nutrition and Metabolism, 42 (9). pp. 978-985.

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Dowe, John Leslie, Lovatt, Rosemary, and Snajder, Nadia (2016) Flowering of Carpoxylon macrospermum: a critically endangered palm, in the Townsville Palmetum, Australia. Palms, 60 (1). pp. 29-37.

Doanh, N. Pham, Tu, A. Luu, Bui, T. Dung, Loan, T. Ho, Nonaka, Nariaki, Horii, Yoichiro, Blair, David, and Nawa, Yukifumi (2016) Molecular and morphological variation of Paragonimus westermani in Vietnam with records of new second intermediate crab hosts and a new locality in a northern province. Parasitology, 143 (12). pp. 1639-1646.

Dibattista, Joseph, Choat, J. Howard, Gaither, Michelle R., Hobbs, Jean-Paul A., Lozano-Cortes, Diego F., Myers, Robert F., Paulay, Gustav, Rocha, Luiz A., Toonen, Robert J., Westneat, Mark W., and Berumen, Michael L. (2016) On the origin of endemic species in the Red Sea. Journal of Biogeography, 43 (1). pp. 13-30.

De Vos, Alta, Cumming, Graeme S., Cumming, David H.M., Ament, Judith M., Baum, Julia, Clements, Hayley S., Grewar, John D., Maciejewski, Kristine, and Moore, Christine (2016) Pathogens, disease, and the social-ecological resilience of protected areas. Ecology and Society, 21 (1). 20. pp. 1-26.

del Mar Palacios , Maria, Warren, Donald T., and McCormick, Mark I. (2016) Sensory cues of a top-predator indirectly control a reef fish mesopredator. Oikos, 125 (2). pp. 201-209.

De Vos, Alta, Cumming, Graeme S., Moore, Christine A., Maciejewski, Kristine, and Duckworth, Gregory (2016) The relevance of spatial variation in ecotourism attributes for the economic sustainability of protected areas. Ecosphere, 7 (2). e01207.

Dixson, Danielle L., Jennings, Ashley R., Atema, Jelle, and Munday, Philip L. (2015) Odor tracking in sharks is reduced under future ocean acidification conditions. Global Change Biology, 21 (4). pp. 1454-1462.

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Domenici, Paolo, Norin, Tommy, Bushnell, Peter G., Johansen, Jacob L., Skov, Peter Vilhelm, Svendsen, Morten B.S., Steffensen, John F., and Abe, Augusto S. (2015) Fast-starting after a breath: air-breathing motions are kinematically similar to escape responses in the catfish Hoplosternum littorale. Biology Open, 4 (1). pp. 79-85.

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Delamare-Deboutteville, J., Bowater, R., Condon, K., Reynolds, A., Fisk, A., Aviles, F., and Barnes, A. (2015) Infection and pathology in Queensland grouper, Epinephelus lanceolatus, (Bloch), caused by exposure to Streptococcus agalactiae via different routes. Journal of Fish Diseases, 38 (12). pp. 1021-1035.

Dudgeon, Christine L., Pollock, Kenneth H., Braccini, J. Matias, Semmens, Jayson M., and Barnett, Adam (2015) Integrating acoustic telemetry into mark-recapture models to improve the precision of apparent survival and abundance estimates. Oecologia, 178 (3). pp. 761-772.

Dell, Anthony I., Zhao, Lei, Brose, Ulrich, Pearson, Richard G., and Alford, Ross A. (2015) Population and community body size structure across a complex environmental gradient. In: Pawar, Samraat, Woodward, Guy, and Dell, Anthony I., (eds.) Trait-Based Ecology: from structure to function. Advances in Ecological Research (52). Elsevier, Waltham, MA, USA, pp. 115-167.

Dufresnes, Christophe, Borzée, Amaël, Horn, Agnes, Stöck, Matthias, Ostini, Massimo, Sermier, Roberto, Wassef, Josef, Litvinchuck, Spartak N., Kosch, Tiffany A., Waldman, Bruce, Jang, Yikweon, Brelsford, Alan, and Perrin, Nicholas (2015) Sex-chromosome homomorphy in Palearctic tree frogs results from both turnovers and XY recombination. Molecular Biology and Evolution, 32 (9). pp. 2328-2337.

Daly, Norelle L., and Rosengren, K. Johan (2015) Structural studies of cyclotides. Advances in Botanical Research, 76. pp. 155-186.

de Boer, Hugo J., Steffen, Karin, and Cooper, Wendy E. (2015) Sunda to Sahul dispersals inTrichosanthes(Cucurbitaceae): a dated phylogeny reveals five independent dispersal events to Australasia. Journal of Biogeography, 42 (3). pp. 519-531.

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Donelson, Jennifer M., McCormick, Mark I., Booth, David J., and Munday, Philip L. (2014) Reproductive acclimation to increased water temperature in a tropical reef fish. PLoS ONE, 9 (5). e97223. pp. 1-9.

Domenici, Paolo, Allan, Bridie J.M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2014) Shifting from right to left: the combined effect of elevated CO2 and temperature on behavioural lateralization in a coral reef fish. PLoS One, 9 (1). e87969. pp. 1-6.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., and Thorrold, Simon R. (2014) Experimental evaluation of imprinting and the role innate preference plays in habitat selection in a coral reef fish. Oecologia, 174 (1). pp. 99-107.

Dixon, Groves B., Bay, Line K., and Matz, Mikhail V. (2014) Bimodal signatures of germline methylation are linked with gene expression plasticity in the coral Acropora millepora. BMC Genomics, 15. 1103. pp. 1-11.

Daly, Norelle L., Seymour, Jamie, and Wilson, David (2014) Exploring the therapeutic potential of jellyfish venom. Future Medicinal Chemistry, 6 (15). pp. 1715-1724.

Dinh Hoai, Truong , and Hutson, Kate S. (2014) Reproductive strategies of the insidious fish ectoparasite, Neobenedenia sp. (Capsalidae: Monogenea). PLoS ONE, 9 (9). e108801. pp. 1-7.

Devine, Brynn M., and Munday, Philip L. (2013) Habitat preferences of coral-associated fishes are altered by short-term exposure to elevated CO₂. Marine Biology, 160 (8). pp. 1955-1962.

Domingos, Jose A., Smith-Keune, Carolyn, Robinson, Nicholas, Loughnan, Shannon, Harrison, Paul, and Jerry, Dean R. (2013) Heritability of harvest growth traits and genotype–environment interactions in barramundi, Lates calcarifer (Bloch). Aquaculture, 402-403. pp. 66-75.

Dartnall, A., Stevens, H., and Byrne, M. (2013) How to lose a population: the effect of Cyclone Larry on a population of Cryptasterina pentagona at Mission Beach, North Queensland. In: Echinoderms in a Changing World: proceedings of the 13th international echinoderm conference. pp. 181-184. From: 13th International Echinoderm Conference, 5-9 January 2009, Hobart, TAS, Australia.

Dabruzzi, Theresa F., Bennett, Wayne A., Rummer, Jodie L., and Fangue, Nann A. (2013) Juvenile ribbontail stingray, Taeniura lymma (ForsskAyenl, 1775) (Chondrichthyes, Dasyatidae), demonstrate a unique suite of physiological adaptations to survive hyperthermic nursery conditions. Hydrobiologia, 701 (1). pp. 37-49.

Dell, Anthony I. (2013) A functional approach to understanding how temperature and habitat dimensionality drive universality and variation in ecological systems. PhD thesis, James Cook University.

Donelson, Jennifer, Munday, Philip, McCormick, Mark, and Pitcher, C.R. (2012) Rapid transgenerational acclimation of a tropical reef fish to climate change. Nature Climate Change, 2. pp. 30-32.

Daly, Norelle, Wilson, David, and Craik, David (2012) Cyclic peptides from plants and their promise in drug design. Australian Biochemist, 43 (2). pp. 7-9.

Dixson, Danielle L., Pratchett, Morgan S., and Munday, Philip L. (2012) Reef fishes innately distinguish predators based on olfactory cues associated with recent prey items rather than individual species. Animal Behaviour, 84 (1). pp. 45-51.

Duong, Van Thang, Li, Yan, Nowak, Ekaterina, and Schenk, Peer M. (2012) Microalgae isolation and selection for prospective biodiesel production. Energies, 5 (6). pp. 1835-1849.

Daskin, Joshua H., and Alford, Ross A. (2012) Context-dependent symbioses and their potential roles in wildlife diseases. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1733). pp. 1457-1465.

Dixson, D.L. (2012) Predation risk assessment by larval reef fishes during settlement-site selection. Coral Reefs, 31 (1). pp. 255-261.

Domenici, Paolo, Allan, Bridie, McCormick, Mark I., and Munday, Philip L. (2012) Elevated carbon dioxide affects behavioural lateralization in a coral reef fish. Biology Letters, 8 (1). pp. 78-81.

Devine, Brynn M., Munday, Philip L., and Jones, Geoffrey P. (2012) Homing ability of adult cardinalfish is affected by elevated carbon dioxide. Oecologia, 168 (1). pp. 269-276.

Devine, B.M., Munday, P.L., and Jones, G.P. (2012) Rising CO2 concentrations affect settlement behaviour of larval damselfishes. Coral Reefs, 31 (1). pp. 229-238.

Dixson, D.L., Munday, P.L., Pratchett, M., and Jones, G.P. (2011) Ontogenetic changes in responses to settlement cues by anemonefish. Coral Reefs, 30 (4). pp. 903-910.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Pratchett, Morgan S., Srinivasan, Maya, Planes, Serge, and Thorrold, Simon R. (2011) Terrestrial chemical cues help coral reef fish larvae locate settlement habitat surrounding islands. Ecology and Evolution, 1 (4). pp. 586-595.

Dekan, Zoltan, Vetter, Irina, Daly, Norelle L., Craik, David J., Lewis, Richard J., and Alewood, Paul F. (2011) α-Conotoxin ImI incorporating stable cystathionine bridges maintains full potency and identical three-dimensional structure. Journal of the American Chemical Society, 133 (40). pp. 15866-15869.

Daskin, Joshua H., Alford, Ross A., and Puschendorf, Robert (2011) Short-term exposure to warm microhabitats could explain amphibian persistence with Batrachochytrium dendrobatidis. PLoS ONE, 6 (10). e26215. pp. 1-4.

Dang, Vinh T., Li, Yan, Speck, Peter, and Benkendorff, Kirsten (2011) Effects of micro and macroalgal diet supplementations on growth and immunity of greenlip abalone, Haliotis laevigata. Aquaculture, 320 (1-2). pp. 91-98.

Daly, Norelle L., and Craik, David J. (2011) Bioactive cystine knot proteins. Current opinion in chemical biology, 15 (3). pp. 362-368.

Duplessis, Sébastien, Cuomo, Christina A., Lin, Yao-Cheng, Aerts, Andrea, Tisserant, Emilie, Veneault-Fourrey, Claire, Joly, David L., Hacquard, Stéphane, Amselem, Joëlle, Cantarel, Brandi L., Chiu, Readman, Coutinho, Pedro M., Feau, Nicolas, Field, Matt, Frey, Pascal, Gelhaye, Eric, Goldberg, Jonathan, Grabherr, Manfred G., Kodira, Chinnappa D., Kohler, Annegret, Kües, Ursula, Lindquist, Erika A., Lucas, Susan M., Mago, Rohit, Mauceli, Evan, Morin, Emmanuelle, Murat, Claude, Pangilinan, Jasmyn L., Park, Robert, Pearson, Matthew, Quesneville, Hadi, Rouhier, Nicolas, Sakthikumar, Sharadha, Salamov, Asaf A., Schmutz, Jeremy, Selles, Benjamin, Shapiro, Harris, Tanguay, Philippe, Tuskan, Gerald A., Henrissat, Bernard, Van de Peer, Yves, Rouzé, Pierre, Ellis, Jeffrey G., Dodds, Peter N., Schein, Jacqueline E., Zhong, Shaobin, Hamelin, Richard C., Grigoriev, Igor V., Szabo, Les J., and Martin, Francis (2011) Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proceedings of the National Academy of Sciences, 108 (22). pp. 9166-9171.

Daly, Norelle L., Rosengren, K. Johan, Henriques, Sónia Troeira, and Craik, David J. (2011) NMR and protein structure in drug design: application to cyclotides and conotoxins. European Biophysics Journal, 40 (4). pp. 359-370.

Davis, Sarah C., Griffiths, Howard, Holtum, Joseph, Saavedra, Alfonso Larqué, and Long, Stephen P. (2011) The evaluation of feedstocks in GCBB continues with a special issue on Agave for bioenergy. GCB Bioenergy, 3 (1). pp. 1-3.

Daskin, Joshua H. (2011) Chytridiomycosis and symbiosis: context-dependency in amphibian disease and conservation. Masters (Research) thesis, James Cook University.

Duke, Norman C. (2011) Joseph Banks (1743-1820). In: Hopley, David, (ed.) Encyclopedia of Modern Coral Reefs. Structure, Form and Process. Encyclopedia of Earth Sciences Series . Springer, Dordrecht, The Netherlands, pp. 96-97.

de Cárcer, Daniel Aguirre, Cuív, Páraic Ó, Wang, Tingting, Kang, Seungha, Worthley, Daniel, Whitehall, Vicki, Gordon, Iain, McSweeney, Chris, Leggett, Barbara, and Morrison, Mark (2011) Numerical ecology validates a biogeographical distribution and gender-based effect on mucosa-associated bacteria along the human colon. ISME Journal: multidisciplinary journal of microbial ecology, 5 (5). pp. 801-809.

Donnelly, R.E., Katzner, T., Gordon, I.J., Gompper, M.E., Redpath, S., Garner, T.W.J., Altwegg, R., Reed, D.H., Acevedo-Whitehouse, K., and Pettorelli, N. (2011) Putting the eco back in ecotourism. Animal Conservation, 14 (4). pp. 325-327.

De Santis, Christian (2011) Regulation of growth: understanding the myostatin functioning in two important aquaculture species, barramundi (Lates calcarifer) and black tiger shrimp (Penaeus monodon). PhD thesis, James Cook University.

Dixson, Danielle Lynn (2011) Smelling home: the use of olfactory cues for settlement site selection by coral reef fish larvae. PhD thesis, James Cook University.

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Domingues, Thomas Ferreira, Meir, Patrick, Feldpausch, Ted R., Saiz, Gustavo, Veenendaal, Elmar M., Schrodt, Franziska, Bird, Michael, Djagbletey, Gloria, Hien, Fidele, Compaore, Halidou, Diallo, Adama, Grace, John, and Lloyd, Jon (2010) Co-limitation of photosynthetic capacity by nitrogen and phosphorus in West Africa woodlands. Plant, Cell & Environment, 33 (6). pp. 959-980.

Dixson, Danielle L., Munday, Philip L., and Jones, Geoffrey P. (2010) Ocean acidification disrupts the innate ability of fish to detect predator olfactory cues. Ecology Letters, 13 (1). pp. 68-75.

de Nys, Rocky, Guenther, Jana, and Uriz, Maria (2010) Natural control of fouling in biofouling. In: Dürr, Simone, and Thomason, Jeremy C., (eds.) Biofouling. Wiley-Blackwell, UK, pp. 109-120.

da Silva, Everton F., Félix, Samuel R., Cerqueira, Gustavo M., Fagundes, Michel Q., Neto, Amilton C.P.S., Grassmann, André A., Amaral, Marta G., Gallina, Tiago, and Dellagostin, Odir (2010) Preliminary characterization of Mus musculus-derived pathogenic strains of Leptospira borgpetersenii serogroup Ballum in a hamster model. American Journal of Tropical Medicine and Hygiene, 83 (2). pp. 336-337.

Dong, Shan-Shan, Huang, Xuan, Qian, Zeng-Qiang, Zhou, Tian-Hua, Li, Shan, and Zhao, Gui-Fang (2009) Isolation and characterization of 14 dinucleotide microsatellite loci in the endangered herb Saruma henryi Oliv. (Aristolochiaceae). Conservation Genetics, 1 (1). pp. 221-224.

Daly, Norelle L., Rosengren, K. Johan, and Craik, David J. (2009) Discovery, structure and biological activities of cyclotides. Advanced Drug Delivery Reviews, 61 (11). pp. 918-930.

Dahdah, Dahdah B., Morin, Isabelle, Moreau, Morgane J.J., Dixon, Nicholas E., and Schaeffer, Patrick M. (2009) Site-specific covalent attachment of DNA to proteins using a photoactivatable Tus–Ter complex. Chemical Communications, 21. pp. 3050-3052.

Donelson, Jennifer M., Munday, Philip L., and McCormick, Mark I. (2009) Parental effects on offspring life histories: when are they important? Biology Letters, 5 (2). pp. 262-265.

Daly, Norelle L., and Craik, David J. (2009) Structural studies of conotoxins. IUBMB Life, 61 (2). pp. 144-150.

Dougall, A., Shilton, C., Choy, J. Low, Alexander , B., and Walton, S. (2009) New reports of Australian cutaneous leishmaniasis in Northern Australian macropods. Epidemiology and Infection, 137 (10). pp. 1516-1520.

De Grave, Sammy, Ahyong, Shane T., Bruce, Niel L., and von Vaupel Klein, Carel J. (2009) Special issue on the occasion of the 80th birthday of A. J. (Sandy) Bruce - 50 years of shrimping in the Indo-West Pacific. Crustaceana, 82 (7). pp. 771-773.

Dixson, Danielle L. , Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., Srinivasan, Maya, Syms, Craig, and Thorrold, Simon R. (2008) Coral reef fish smell leaves to find island homes. Proceedings of the Royal Society of London Series B, Biological Sciences, 275. pp. 2831-2839.

Donelson, Jennifer M., McCormick, Mark I., and Munday, Philip (2008) Parental condition affects early life-history of a coral reef fish. Journal of Experimental Marine Biology and Ecology, 360 (2). pp. 109-116.

De Gabriel, Jane L., Wallis, Ian R., Moore, Ben D., and Foley, William J. (2008) A simple, integrative assay to quantify nutritional quality of browses for herbivores. Oecologia, 156 (1). pp. 107-116.

Dunn, Derek W., Segar, Simon, Ridley, Jo, Chan, Ruth, Crozier, Ross H., Yu, Douglas W., and Cook, James M. (2008) A role for parasites in stabilising the fig-pollinator mutualism. PLoS Biology, 6 (3). pp. 490-496.

Davis, Jennifer L. (2008) Improving short-term removal methods of the introduced pest species the cane toad, Chaunus [Bufo] marinus, in north-eastern Australia. Masters (Research) thesis, James Cook University.

Dobbs, Kirstin, Fernandes, Leanne, Slegers, Suzanne, Jago, Belinda, Thompson, Leanne, Hall, James, Day, Jon, Cameron, Darren, Tanzer, John, Macdonald, Fiona, Marsh, Helene, and Coles, Rob (2008) Incorporating dugong habitats into the marine protected area design for the Great Barrier Reef Marine Park, Queensland, Australia. Ocean & Coastal Management, 51 (4). pp. 368-375.

Dinsdale, Elizabeth A., Pantos, Olga, Smriga, Steven, Edwards, Robert A., Angly, Florence, Wegley, Linda, Hatay, Mark, Hall, Dana, Brown, Elysa, Haynes, Matthew, Krause, Lutz, Sala, Enric, Sandin, Stuart A., Thurber, Rebecca Vega, Willis, Bette L., Azam, Farooq, Knowlton, Nancy, and Rohwer, Forest (2008) Microbial ecology for four coral atolls in the Northern Line Islands. PLoS Biology, 3 (2). pp. 1-17.

Depczynski, Martial, Fulton, Christopher J., Marnane, Michael J., and Bellwood, David R. (2007) Life history patterns shape energy allocation among fishes on coral reefs. Oecologia, 153 (1). pp. 111-120.

Dowe, John Leslie (2007) Ptychosperma macarthurii: discovery, horticulture and taxonomy. Palms, 51 (2). pp. 85-96.

de Jong, Danielle M., Hislop, Nikki R., Hayward, David C., Reece-Hoyes, John S., Pontynen, Patricia C., Ball, Eldon, and Miller, David J. (2006) Components of both major axial patterning systems of the Bilateria are differentially expressed along the primary axis of a 'radiate' animal, the anthozoan cnidarian Acropora millepora. Developmental Biology, 298 (2). pp. 632-643.

Dixon, Nicholas, Schaeffer, Patrick, and Mulcair, Mark Australian National University (2006) Double-stranded oligonucleotides and uses therefor. WO 2006 081623 A1 .

Dworjanyn, Symon A., Wright, Jeffrey T., Paul, Nicholas A., de Nys, Rocky, and Steinberg, Peter D. (2006) Cost of chemical defence in the red alga Delisea pulchra. Oikos, 113 (1). pp. 13-22.

Dornelas, Maria, Connolly, Sean R., and Hughes, Terrence P. (2006) Coral reef diversity refutes the neutral theory of biodiversity. Nature, 440 (7080). pp. 80-82.

Duke, Norman C., and Allen, James A. (2006) Atlantic-East Pacific red mangroves: Rhizophora mangle, R. samoensis, R. racemosa, R. X harrisonii. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-18.

Duke, Norman (2006) Australia's Mangroves: an authoritative guide to Australia’s mangrove plants. University of Queensland and Norman C. Duke, Brisbane, QLD, Australia.

Dworjanyn, S.A., de Nys, R., and Steinberg, P.D. (2006) Chemically mediated antifouling in the red alga Delisea pulchra. Marine Ecology Progress Series, 318. pp. 153-163.

Dziminski, Martin A., and Alford, Ross A. (2005) Patterns and fitness consequences of intraclutch variation in egg provisioning in tropical Australian frogs. Oecologia, 146 (1). pp. 98-109.

Depczynski, Martial, and Bellwood, David R. (2005) Shortest recorded vertebrate lifespan found in a coral reef fish. Current Biology, 15 (8). pp. 288-289.

Day, Lainy B., Westcott, David A., and Olster, Deborah H. (2005) Evolution of bower complexity and cerebellum size in bowerbirds. Brain Behavior and Evolution, 66 (1).

Duke, Norman C., Bell, Alicia M., Pedersen, Dan K., Roelfsema, Chris M., and Bengston Nash, Susan (2005) Herbicides implicated as the cause of severe mangrove dieback in the Mackay region, NE Australia: consequences for marine plant habitats of the GBR World Heritage Area. Marine Pollution Bulletin, 51 (1-4). pp. 308-324.

Dowe, John Leslie (2005) Ludwig Leichhardt's Australian plant collections, 1842-1847. Austrobaileya, 7 (1). pp. 151-163.

Druery, G.V., Rival, M.D., Taggart, D.A., Shimmin, G.A., Horsup, A.B., Temple-Smith, P.D., Paris, D.B.B.P., and Paris, M.C.J. (2005) Timing of ovulation in the gonadotrophin-stimulated southern hairy-nosed wombat, Lasiorhinus latifrons. Reproduction, Fertility and Development, 17 (2). p. 246.

Druery, G.V., Taggart, D.A., Shimmin, G.A., Horsup, A.B., Temple-Smith, P.D., Paris, D.B.B.P., and Paris, M.C.J. (2004) Time of ovulation and artificial insemination following superovulation in the southern hairy-nosed wombat (Lasiorhinus latifrons). Advances in Ethology, 38. p. 100.

Dartnall, Alan J., Byrne, Maria, Collins, John, and Hart, Michael W. (2003) A new viviparous species of asterinid (Echinodermata, Asteroidea, Asterinidae) and a new genus to accommodate the species of pantropical exiguoid sea stars. Zootaxa, 359. pp. 1-14.

Dempster, Tim, and Kingsford, Michael J. (2003) Homing of pelagic fish to fish aggregation devices (FADs): the role of sensory cues. Marine Ecology Progress Series, 258. pp. 213-222.

Doroudi, M.S., Southgate, P.C., and Lucas, J.S. (2003) Variation in clearance and ingestion rates by larvae of the black-lip pearl oyster (Pinctada margaritifera, L.) feeding on various microalgae. Aquaculture Nutrition, 9 (1). pp. 11-16.

Dennis, Andrew J. (2003) Scatter-hoarding by musky rat-kangaroos, Hypsiprymnodon moschatus, a tropical rain-forest marsupial from Australia: implications for seed dispersal. Journal of Tropical Ecology, 19 (6). pp. 619-627.

Drake, P.L., and Franks, P.J. (2003) Water resource partitioning, stem xylem hydraulic properties, and plant water use strategies in a seasonally dry riparian tropical rainforest. Oecologia, 137 (3). pp. 321-329.

Durr, P.A., and Rangel, J. (2003) The response of Panicum maximum to a simulated subcanopy environment: 2. soil x shade x water interaction. Tropical Grasslands (Journal), 37 (1). pp. 1-10.

Dixon, Dale J. (2003) A taxonomic revision of the Australian Ficus species in the section Malvanthera (Ficus subg. Urostigma: Moraceae). Telopea, 10 (1). pp. 125-153.

Duke, Norman, and Watkinson, Andrew J. (2002) Chlorophyll-deficient propagules of Avicennia marina and apparent longer term deterioration of mangrove fitness in oil-polluted sediments. Marine Pollution Bulletin, 44 (11). pp. 1269-1276.

Duke, Norman C. (2002) Sustained high levels of foliar herbivory of the mangrove Rhizophora stylosa by a moth larva Doratifera stenosa (Limacodidae) in north-eastern Australia. Wetlands Ecology and Management, 10 (5). pp. 403-419.

Doroudi, Mehdi S., Southgate, Paul C., and Mayer, Robert J. (2002) Evaluation of partial substitution of live algae with dried Tetraselmis for larval rearing of black-lip pearl oyster, Pinctada margaritifera (L.). Aquaculture International, 10 (4). pp. 265-277.

Diaz-Pulido, Guillrtmo, and McCook, Laurence J. (2002) The fate of bleached corals: patterns and dynamics of algal recruitment. Marine Ecology Progress Series, 232. pp. 115-128.

Diaz-Pulido, G., and Garzón-Ferreira, J. (2002) Seasonality in algal assemblages on upwelling-influenced coral reefs in the Colombian Caribbean. Botanica Marina, 45 (3). pp. 284-292.

Duke, Norman C., Lo, Eugenia Yuk Ying, and Sun, Mei (2002) Global distribution and genetic discontinuities of mangroves: emerging patterns in the evolution of Rhizophora. Trees, 16 (2). pp. 65-79.

Diaz-Pulido, Guillermo (2002) Algal recruitment and reproduction in the context of reef degradation: interactions with corals, substrates, herbivores and nutrients. PhD thesis, James Cook University.

Durr, P.A., and Rangel, J. (2002) Enhanced forage production under Samanea saman in a subhumid tropical grassland. Agroforestry Systems, 54 (2). pp. 99-102.

de Nys, Rocky, and Steinberg, Peter D. (2002) Linking marine biology and biotechnology. Current Opinion in Biotechnology, 13 (3). pp. 244-248.

Dowe, John Leslie (2002) Sago palms, Metroxylon (Arecaceae) in Vanuatu and the Solomon Islands: traditional and current uses. In: New Frontiers of Sago Palm Studies: proceedings of the International Symposium on SAGO. pp. 227-236. From: International Symposium on SAGO 2001, October 15-17, 2001, Tsukuba, Japan.

Dowe, John Leslie, and Smith, Lucy T. (2002) A brief history of the coconut palm in Australia. Palms, 46 (3). pp. 134-138.

Doroudi, Mehdi S., and Southgate, Paul C. (2002) The effect of chemical cues on settlement behaviour of blacklip pearl oyster (Pinctada margaritifera) larvae. Aquaculture, 209 (1-4). pp. 117-124.

Dowe, John L., and Barfod, Anders S. (2001) New species of Livistona R. Br. (Arecaceae) from north Queensland and Papua New Guinea. Austrobaileya, 6 (1). pp. 165-174.

Devlin, Michelle, Waterhouse, Jane, Taylor, Jeremy, and Brodie, Jon (2001) Flood plumes in the Great Barrier Reef : spatial and temporal patterns in composition and distribution. Report. Great Barrier Reef Marine Park Authority, Townsville, Australia.

Duke, Norman C. (2001) Gap creation and regenerative processes driving diversity and structure of mangrove ecosystems. Wetlands Ecology and Management, 9 (3). pp. 257-269.

Dixon, Dale J. (2001) Figs, wasps and species concepts: a re-evaluation of the infraspecific taxa of Ficus macrophylla (Moraceae: Urostigma sect. Malvanthera). Australian Systematic Botany, 14 (1). pp. 125-132.

Dixon, Dale J., Jackes, B.R., and Bielig, L.M. (2001) Figuring out the figs: the Ficus obliqua - Ficus rubiginosa complex (Moraceae: Urostigma sect. Malvanthera). Australian Systematic Botany, 14. pp. 133-154.

Duke, Norman (2001) Mangrove phenologies and the factors influencing them in the Australasian region. In: De Lacerda, Luiz-Drude, (ed.) Mangrove Ecosystems: Function and Management. Environmental Science . Springer-Verlag, Berlin, Germany, pp. 217-233.

Duke, Norman, and Wolanski, Eric (2001) Muddy coastal waters and depleted mangrove coastlines - depleted seagrass and coral reefs. In: Wolanski, Eric, (ed.) Oceanographic Processes of Coral Reefs: physical and biology links in the Great Barrier Reef. CRC Press, Washington, DC, USA, pp. 77-91.

Dowe, John L., and Ferrero, Michael D. (2001) Revision of calyptrocalyx and the New Guinea species of linospadix (Linospadicinae: Arecoideae: Arecaceae). Blumea, 46. pp. 207-251.

Dixon, Dale J. (2001) A chequered history: the taxonomy of Ficus platypoda and F. leucotricha (Moraceae: Urostigma sect. Malvanthera) unravelled. Australian Systematic Botany, 14 (4). pp. 535-563.

Dixon, Dale (2001) The move to on-line teaching: some issues facing academics. In: Canyon, D.V., McGinty, S., and Dixon, D., (eds.) Tertiary Teaching IV: Flexible teaching and learning across the disciplines. Craftsmen Products Pty Ltd - Online Publications, Sydney, Australia, pp. 11-20.

Dong, Liang, Chang, Jenny R., Chin, Alvin J., Smith, Alastair, Kelly, Christina, Weinberg, Eric S., and Ge, Ruowen (2001) The role of Vascular Endothelial Growth Factor (VEGF) in Vasculogenesis, Angiogenesis, and Hematopoiesis in Zebrafish development. Mechanisms of Development, 108 (1-2). pp. 29-43.

Durr, P.A., and Rangel, J. (2000) The response of Panicum maximum to a simulated subcanopy environment: 1. soil × shade interaction. Tropical Grasslands, 34 (2). pp. 110-117.

Duke, Norman C., Burns, Kathryn A., Swannell, Richard P.J., Dalhaus, Otto, and Rupp, Roland J. (2000) Dispersant use and a bioremediation strategy as alternate means of reducing the impact of large oil spills on mangrove biota in Australia: the Gladstone field trials. Marine Pollution Bulletin, 41 (7-12). pp. 403-412.

Diaz, Juan M., Diaz-Pulido, Guillermo, and Sanchez, Juan (2000) Distribution and structure of the southernmost Caribbean coral reefs: golfo de Urabá, Colombia. Scientia Marina, 64 (3). pp. 327-336.

Diaz-Pulido, G. (2000) Microbial degradation of the crustose red alga Peyssonnelia spp. on reefs of the Caribbean and Great Barrier Reef. In: Proceedings of the 9th International Coral Reef Symposium (2) pp. 1257-1260. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Dawson, Terence J., Blaney, Cyntina, Munn, Adam J., Krockenberger, Andrew, and Maloney, Shane K. (2000) Thermoregulation by kangaroos from mesic and arid habitats: influence of temperature on routes of heat loss in Eastern Grey Kangaroos (Macropus giganteus) and Red Kangaroos (Macropus rufus). Physiological and Biochemical Zoology, 73 (3). pp. 374-381.

Dawson, Terence J., Munn, Adam J., Blaney, Cyntina E., Krockenberger, Andrew, and Maloney, Shane K. (2000) Ventilatory accommodation of oxygen demand and respiratory water loss in kangaroos from mesic and arid environments, the eastern grey kangaroo (Macropus giganteus) and the red kangaroo (Macropus rufus). Physiological and Biochemical Zoology, 73 (3). pp. 382-388.

Dixon, Dale James (1999) Figuring out the figs: systematic studies in Ficus, Moraceae, (Urostigma sect. Malvanthera). PhD thesis, James Cook University.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1999) Recovery of tropical mangrove forests following a major oil spill: a study of recruitment and growth, and the benefits of planting. In: Yáñez-Arancibia, A., and Lara-Domínguez, A.L., (eds.) Ecosistemas de Manglar en América Tropical / Mangrove Ecosystems in Tropical America. Instituto de Ecologia, Xalapa, México, pp. 231-254.

Duke, Norman, and Khan, M. Ajmal (1999) Structure and composition of the seaward mangrove forest at Mai Po Marshes Nature Reserve, Hong Kong. In: The mangrove ecosystem of Deep Bay and the Mai Po marshes, Hong Kong : proceedings of the International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, Hong Kong. pp. 83-104. From: International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, 3-20 September 1993, Hong Kong.

Duke, Norman C., Benzie, John A.H., Goodall, John A., and Ballment, Elizabeth R. (1998) Genetic structure and evolution of species in the mangrove genus Avicennia (Avicenniaceae) in the Indo-West Pacific. Evolution: international journal of organic evolution, 52 (6). pp. 1612-1626.

Duke, Norman, Ball, Marilyn, and Ellison, Joanna (1998) Factors influencing biodiversity and distributional gradients in mangroves. Global Ecology and Biogeography, 7 (1). pp. 27-47.

Duke, N.C., Burns, K.A., Ellison, J.C., Rupp, R.J., and Dalhaus, O. (1998) Effects of oil and dispersed-oil on mature mangroves in field trials at Gladstone. APPEA Journal, 38 (2). pp. 637-645.

Duke, N.C., Burns, K.A., and Dalhaus, O. (1998) Effects of oils and dispersed-oils on mangrove seedlings in planthouse experiments: a preliminary assessment of results two months after oil treatments. APPEA Journal, 38 (2). pp. 631-636.

Duke, N.C., Ellison, J.C., and Burns, K.A. (1998) Surveys of oil spill incidents affecting mangrove habitat in Australia: a preliminary assessment of incidents, impacts on mangroves, and recovery of deforested areas. APPEA Journal, 38 (2). pp. 646-654.

Dennis, P., Young, M.R., Howard, C.L., and Gordon, I.J (1997) The response of epigeal beetles (Col.: Carabidae, Staphylinidae) to varied grazing regimes on upland Nardus stricta grasslands. Journal of Applied Ecology, 34 (2). pp. 433-443.

Duke, Norman C., Pinzón, Zulelka S., and Prada, Martha C. (1997) Large scale damage to mangrove forests following two large oil spills in Panama. Biotropica, 29 (1). pp. 2-14.

Duke, Norman (1997) Mangroves in the Great Barrier Reef World Heritage Area: current status, long-term trends, management implications and research. In: Wachenfeld, David, Oliver, Jamie, and Davis, Kim, (eds.) State of the Great Barrier Reef World Heritage Area Workshop. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 288-299.

Duke, Norman (1996) Mangrove reforestation in Panama: an evaluation of planting in areas deforested by a large oil spill. In: Field, Colin D., (ed.) Restoration of mangrove ecosystems. International Society for Mangrove Ecosystems ISME & International Tropical Timber Organization ITTO, Okinawa, Japan, pp. 209-232.

Diverio, S., Goddard, P.J., and Gordon, I.J. (1996) Physiological responses of farmed red deer to management practices and their modulation by long-acting neuroleptics. Journal of Agricultural Science, 126 (2). pp. 211-220.

Duke, Norman C. (1995) Genetic diversity, distributional barriers and rafting continents - more thoughts on the evolution of mangroves. Hydrobiologia, 295 (1). pp. 167-181.

Dennis, A.J., and Johnson, P.M. (1995) Musky Rat-kangaroo, Hypsiprymnodon moschatus. In: Strahan, Ronald, (ed.) The Mammals of Australia: the national photographic index of Australian wildlife. Reed Books, Chatswood, NSW, pp. 282-284.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1994) Los manglares / The swamps. Scientia, 8 (2). pp. 80-98.

Duke, Norman C. (1994) A mangrove hybrid, Sonneratia x urama (Sonneratiaceae) from northern Australia and southern New Guinea. Australian Systematic Botany, 7 (5). pp. 521-526.

Delaney, Robyn Margaret (1993) Life history and reproductive ecology of a tropical rock wallaby, Petrogale assimilis. PhD thesis, James Cook University.

Duke, Norman C., and Pinzón M., Zuleika S. (1992) Aging Rhizophora seedlings from leaf scar nodes: a technique for studying recruitment and growth in mangrove forests. Biotropica, 24 (2 Part A). pp. 173-186.

Duke, Norman C. (1992) Mangrove floristics and biogeography. In: Robertson, A.I., and Alongi, D.M., (eds.) Tropical Mangrove Ecosystems. Coastal and Estuarine Studies Series (41). American Geophysical Union, Washington, D.C., pp. 63-100.

Downes, Michael Frank (1992) The life history and behaviour of the subsocial amaurobioid spider Badumna candida. PhD thesis, James Cook University.

de Nys, Rocky (1991) Natural products chemistry and chemical ecology of tropical marine algae. PhD thesis, James Cook University.

Duke, Norman (1991) Nypa in the mangroves of Central America: introduced or relict? Principes, 35 (3). pp. 127-132.

Duke, N.C. (1991) A systematic revision of the mangrove genus Avicennia (Avicenniaceae) in Australasia. Australian Systematic Botany, 4 (2). pp. 299-324.

Delaney, Robyn, and De'ath, Glenn (1990) Age estimation and growth-rates of captive and wild pouch young of Petrogale-assimilis. Australian Wildlife Research, 17 (5). pp. 491-499.

Duke, N.C. (1990) Morphological variation in the mangrove genus Avicennia in Australasia: systematic and ecological considerations. Australian Systematic Botany, 3 (2). pp. 221-239.

Duke, N.C. (1990) Phenological trends with latitude in the mangrove tree Avicennia marina. Journal of Ecology, 78 (1). pp. 113-133.

Duke, N.C. (1988) Phenologies and litter fall of two mangrove trees, Sonneratia alba Sm. and S. caseolaris (L.) Engl., and their putative hybrid, S. X gulngai N.C. Duke. Australian Journal of Botany, 36 (4). pp. 473-482.

Duff, Gordon (1987) Physiological ecology and vegetation dynamics of North Queensland upland rainforest-open forest ecotones. PhD thesis, James Cook University.

Duke, N.C., and Jackes, Betsy R. (1987) A systematic revision of the mangrove genus Sonneratia (Sonneratiaceae) in Australasia. Blumea, 32 (2). pp. 277-302.

Downes, Michael Frank (1985) Inviable egg production in Theridion rufipes (Araneae, Theridiidae): a harvest for first instar spiderlings. Masters (Research) thesis, James Cook University.

Duke, N.C., Bunt, J.S., and Williams, W.T. (1984) Observations on the floral and vegetative phenologies of north-eastern Australian mangroves. Australian Journal of Botany, 32 (1). pp. 87-99.

Duke, N.C. (1984) A mangrove hybrid, Sonneratia X gulngai (Sonneratiaceae), from north-eastern Australia. Austrobaileya, 2 (1). pp. 103-105.

Duke, N.C., Birch, W.R., and Williams, W.T. (1981) Growth rings and rainfall correlations in a mangrove tree of the genus Diospyros (Ebenaceae). Australian Journal of Botany, 29 (2). pp. 135-142.

Duke, N.C., Bunt, J.S., and Williams, W.T. (1981) Mangrove litter fall in north-eastern Australia. 1. Annual totals by component in selected species. Australian Journal of Botany, 29 (5). pp. 547-553.

Duke, N.C., and Bunt, J.S. (1979) The genus Rhizophora (Rhizophoraceae) in north-eastern Australia. Australian Journal of Botany, 27 (5). pp. 657-678.

E

Elliman, J. Ruth, and Owens, L. (2020) Confirmation that candidatus Coxiella cheraxi from redclaw crayfish (Cherax quadricarinatus) is a close relative of Coxiella burnetii, the agent of Q-fever. Letters in Applied Microbiology, 71 (3). pp. 320-326.

Eurich, J.G., Matley, J.K., Baker, R., McCormick, M.I., and Jones, G.P. (2019) Stable isotope analysis reveals trophic diversity and partitioning in territorial damselfishes on a low-latitude coral reef. Marine Biology, 166 (2). 17.

Evans, Edward R.J., Northfield, Tobin D., Daly, Norelle L., and Wilson, David T. (2019) Venom costs and optimization in scorpions. Frontiers in Ecology and Evolution, 7. 196.

Engholm-Keller, Kasper, Waardenberg, Ashley J., Müller, Johannes A., Wark, Jesse R., Fernando, Rowena N., Arthur, Jonathan W., Robinson, Phillip J., Dietrich, Dirk, Schoch, Susanne, Graham, Mark E., UNSPECIFIED, and UNSPECIFIED (2019) The temporal profile of activity-dependent presynaptic phospho-signalling reveals long-lasting patterns of poststimulus regulation. PLoS Biology, 17 (3). e3000170.

Eurich, J.G., McCormick, M.I., and Jones, G.P. (2018) Habitat selection and aggression as determinants of fine-scale partitioning of coral reef zones in a guild of territorial damselfishes. Marine Ecology Progress Series, 587. pp. 201-215.

Emslie, Michael J., and Pratchett, Morgan S. (2018) Differential vulnerabilities of parrotfishes to habitat degradation. In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 355-382.

Eurich, Jacob G., McCormick, Mark I., and Jones, Geoffrey P. (2018) Direct and indirect effects of interspecific competition in a highly partitioned guild of reef fishes. Ecosphere, 9 (8). e02389.

Epstein, Hannah Elizabeth (2018) Investigating the drivers of microbial community composition in reef-building corals. PhD thesis, James Cook University.

Eurich, Jacob G. (2018) Processes underlying the fine-scale partitioning and niche diversification in a guild of coral reef damselfishes. PhD thesis, James Cook University.

Elumalai, Punniyakotti, Parthipan, Punniyakotti, Narenkumar, Jayaraman, Sarankumar, Raja Kumaresan, and Obulisamy, Parthiba Karthikeyan (2017) Influence of thermophilic bacteria on corrosion of carbon steel in hyper chloride environment. International Journal of Environmental Research, 11 (3). pp. 339-347.

Eldridge, Mark D.B., Miller, Emily J., Neaves, Linda E., Zenger, Kyall R., and Herbert, Catherine (2017) Extensive genetic differentiation detected within a model marsupial, the tammar wallaby (Notamacropus eugenii). PLoS ONE, 12 (3). e0172777. pp. 1-23.

Escalas, Arthur, Troussellier, Marc, Yuan, Tong, Bouvier, Thierry, Bouvier, Corinne, Mouchet, Maud A., Hernandez, Domingo Flores, Miranda, Julia Ramos, Zhou, Jizhong, and Mouillot, David (2017) Functional diversity and redundancy across fish gut, sediment and water bacterial communities. Environmental Microbiology, 19 (8). pp. 3268-3282.

Endersby-Harshman, Nancy M., Wuliandari, Juli Rochmijati, Harshman, Lawrence G., Frohn, Verena, Johnson, Brian J., Ritchie, Scott A., and Hoffmann, Ary A. (2017) Pyrethroid susceptibility has been maintained in the dengue vector, Aedes aegypti (Diptera: Culicidae), in Queensland, Australia. Journal of Medical Entomology, 54 (6). pp. 1649-1658.

Edmonds, Rohan, Leicht, Anthony, Burkett, Brendan, and McKean, Mark (2016) Cardiac autonomic and salivary responses to a repeated training bout in elite swimmers. Sports, 4 (1). 13.

Edwards, Will, Moles, Angela T., and Chong, Caroline (2015) Generalised extreme value distributions provide a natural hypothesis for the shape of seed mass distributions. PLoS ONE, 10 (4). e0121724. pp. 1-9.

Espinoza, Mario, Munroe, Samantha E.M., Clarke, Tayler M., Fisk, Aaron T., and Wehrtmann, Ingo S. (2015) Feeding ecology of common demersal elasmobranch species in the Pacific coast of Costa Rica inferred from stable isotope and stomach content analyses. Journal of Experimental Marine Biology and Ecology, 470. pp. 12-25.

Espinoza-Rodríguez, Níneve, Carrasquero, Joanmyra, De Turris-Morales, Kareen, Delgado-Ortega, Gabriela, and Barrios Garrido, Héctor (2015) Seabirds and Sotalia guianensis associations at the southern Gulf of Venezuela / Asociaciones entre aves marinas y sotalia guianensis el el sur del Golfo de Venezuela. Caldasia, 37 (2). 54381. pp. 309-318.

Eriksen, Marit Skog, Poppe, Trygve T., McCormick, Mark, Damsgard, Børge, Salte, Ragnar, Braastad, Bjarne O., and Bakken, Morten (2015) Simulated maternal pre-spawning stress affects offspring's attributes in farmed Atlantic salmon Salmo salar (Linnaeus, 1758). Aquaculture Research, 46 (6). pp. 1480-1489.

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Edwards, Will, and Moles, Angela T. (2009) Re-contemplate an entangled bank: the "Power of Movement in Plants" revisited. Botanical Journal of the Linnean Society, 160 (2). pp. 111-118.

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Edwards, Will, Moles, Angela T., and Franks, Peter (2007) The global trend in plant twining direction. Global Ecology and Biogeography , 16 (6). pp. 795-800.

Endo, Tetsuya, Yong-Un, Ma, Baker, C. Scott, Funahashi, Naoko, Lavery, Shane, Dalebout, Merel L., Lukoschek, Vimoksalehi, and Haraguchi, Koichi (2007) Contamination level of mercury in red meat products from cetaceans available from South Korea markets. Marine Pollution Bulletin, 54 (6). pp. 669-677.

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Edwards, Will (2006) Plants reward seed dispersers in proportion to their effort: the relationship between pulp mass and seed mass in vertebrate dispersed plants. Evolutionary Ecology, 20 (4). pp. 365-376.

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Edwards, Will, and Krockenberger, Andrew (2006) Seedling mortality due to drought and fire associated with the 2002 El Nino Event in a tropical rain forest in north-east Queensland, Australia. Biotropica, 38 (1). pp. 16-26.

Edwards, Will, Dunlop, Michael, and Rodgerson, Louise (2006) The evolution of rewards: seed dispersal, seed size and elaiosome size. Journal of Ecology, 94 (3). pp. 687-694.

Endler, John A., Westcott, David A., Madden, Joah R., and Robson, Tim (2005) Animal visual systems and the evolution of color patterns: sensory processing illuminates signal evolution. Evolution: international journal of organic evolution, 59 (8). pp. 1795-1818.

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Field, Ashley Raymond (2018) Phlegmariurus vanuatuensis (Huperzioideae, Lycopodiaceae) a new species from Vanuatu, re-circumscription of P. nummulariifolius and new combinations in Phlegmariurus. PhytoKeys, 109. pp. 53-66.

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