Mitochondrial genome of Ogmocotyle sikae and implications for phylogenetic studies of the Notocotylidae trematodes

Ma, Jun, He, Jun-Jun, Liu, Guo-Hua, Blair, David, Liu, Li-Zhi, Liu, Yi, and Zhu, Xing-Quan (2016) Mitochondrial genome of Ogmocotyle sikae and implications for phylogenetic studies of the Notocotylidae trematodes. Infection, Genetics and Evolution, 37. pp. 208-214.

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Abstract

Ogmocotyle spp. (Trematoda: Digenea: Notocotylidae) are neglected but important trematodes that can infect numerous mammal species, causing significant economic losses to livestock industries. However, there have been few studies on the molecular ecology of these trematodes. We amplified and sequenced the complete mitochondrial (mt) genome of Ogmocotyle sikae (14,307 bp). The gene content and gene arrangement of O. sikae mt genome was similar to that of Dicrocoelium chinensis, except that trnE and trnG were reversed. Phylogenetic analysis of O. sikae and selected parasites using Bayesian inference was performed based on concatenated amino acid sequence datasets conceptually translated from the 12 protein-coding genes. The results indicated that the family Notocotylidae is related to the family Paramphistomatidae. Our description of O. sikae mt genome provides a significant resource of molecular markers for future comparative studies of the Notocotylidae and other trematodes.

Item ID: 43243
Item Type: Article (Research - C1)
ISSN: 1567-7257
Keywords: Ogmocotyle sikae, Notocotylidae trematodes, mitochondrial genome, phylogenetic analysis
Funders: National Key Basic Research Program (973 Program) of China (NKBRP), International Science & Technology Cooperation Program of China (ISTCPC), Special Fund for Agro-Scientific Research in the Public Interest (SFASR), Science Fund for Creative Research Groups of Gansu Province (SFCRGG)
Projects and Grants: NKBRP #2015CB150300, ISTCPC #2013DFA31840, SFASR #201303037, SFCRGG #1210RJIA006
Date Deposited: 24 Feb 2016 07:42
FoR Codes: 06 BIOLOGICAL SCIENCES > 0604 Genetics > 060411 Population, Ecological and Evolutionary Genetics @ 100%
SEO Codes: 83 ANIMAL PRODUCTION AND ANIMAL PRIMARY PRODUCTS > 8399 Other Animal Production and Animal Primary Products > 839999 Animal Production and Animal Primary Products not elsewhere classified @ 50%
97 EXPANDING KNOWLEDGE > 970106 Expanding Knowledge in the Biological Sciences @ 50%
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