Publications by: Marine Biology & Aquaculture

Up a level
Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0 [feed] RSS 2.0
Group by: No Grouping | Creators | Item Type
Number of items: 3780.

Article

Morais, Juliano, Tebbett, Sterling B., Morais Araujo, Renato A., and Bellwood, David R. (2024) Hot spots of bleaching in massive Porites coral colonies. Marine Environmental Research, 193. 106276.

Jones, Nicholas P., Pratchett, Morgan S., Milligan, Rosanna J., and Gilliam, David S. (2023) High incidence of partial colony mortality constrains realized growth for three coral species in southeast Florida. Marine Ecology Progress Series, 721. pp. 59-70.

Ford-Learner, Nicholas, Addison, Jane, and Smallhorn-West, Patrick (2024) Conservation and human rights: The public commitments of international conservation organizations. Conservation Letters. e13035. (In Press)

Moran, Megan N., Jones, D.B., Jensen, S.A., Marcoli, R., and Jerry, D. R. (2024) Optimising commercial traits through gene editing in aquaculture: Strategies for accelerating genetic improvement. Reviews in Aquaculture. (In Press)

Uthicke, Sven, Doyle, Jason R., Gomez Cabrera, Maria, Patel, Frances, McLatchie, Madi J., Doll, Peter C., Chandler, Josie F., and Pratchett, Morgan S. (2024) eDNA monitoring detects new outbreak wave of corallivorous seastar (Acanthaster cf. solaris) at Lizard Island, Great Barrier Reef. Coral Reefs. (In Press)

Messer, Lauren F., Bourne, David G., Robbins, Steven J., Clay, Megan, Bell, Sara C., McIlroy, Simon J., and Tyson, Gene W. (2024) A genome-centric view of the role of the Acropora kenti microbiome in coral health and resilience. Nature Communications, 15. 2902.

Sheaves, M., Baker, R., dos Santos Abrantes, K., Barnett, A., Bradley, M., Dubuc, A., Mattone, C., Sheaves, J., and Waltham, N. (2024) Consequences for nekton of the nature, dynamics, and ecological functioning of tropical tidally dominated ecosystems. Estuarine, Coastal and Shelf Science, 304. 108825.

Jerry, Emily M., Karnaneedi, Shaymaviswanathan, Ruethers, Thimo, Jerry, Dean R., Condon, Kelly, and Lopata, Andreas L. (2024) Allergen Diversity and Abundance in Different Tissues of the Redclaw Crayfish (Cherax quadricarinatus). Foods, 13 (2). 315.

Saleh, Alzayat, Sheaves, Marcus, Jerry, Dean, and Rahimi Azghadi, Mostafa (2024) Applications of deep learning in fish habitat monitoring: A tutorial and survey. Expert Systems with Applications, 238. 121841.

Lee, Calvin K.F., Nicholson, Emily, Duncan, Clare, Grantham, Hedley, Keith, David A., Tizard, Rob, and Murray, Nicholas J. (2024) Assessing the conservation status of mangroves in Rakhine, Myanmar. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (1). e4058.

Price, Jeff, Warren, Rachel, Forstenhäusler, Nicole, Jenkins, Rhosanna, and Graham, Erin (2024) Assessing the potential risks of climate change on the natural capital of six countries resulting from global warming of 1.5 to 4 °C above pre-industrial levels. Climatic Change, 177. 46.

Atwood, Trisha B., Romanou, Anastasia, DeVries, Tim, Lerner, Paul E., Mayorga, Juan S., Bradley, Darcy, Cabral, Reniel B., Schmidt, Gavin A., and Sala, Enric (2024) Atmospheric CO2 emissions and ocean acidification from bottom-trawling. Frontiers in Marine Science, 10. 1125137.

Scardifield, Kate, McLean, Nahum, Kuzhiumparambil, Unnikrishnan, Ralph, Peter J., Neveux, Nicolas, Isaac, Geoff, and Schork, Tim (2024) Biomasonry products from macroalgae: A design driven approach to developing biomaterials for carbon storage. Journal of Applied Phycology, 36. pp. 935-950.

Lubitz, Nicolas, Daly, Ryan, Smoothey, Amy F., Vianello, Patrick, Roberts, Michael J., Schoeman, David S., Sheaves, Marcus, Cowley, Paul D., Dagorn, Laurent, Forget, Fabien G., Soria, Marc, Peddemors, Victor M., Filmalter, John D., Butcher, Paul A., Brett, Greg, and Barnett, Adam (2024) Climate change-driven cooling can kill marine megafauna at their distributional limits. Nature Climate Change, 14. pp. 526-535.

Whitman, T.N., Hoogenboom, M.O., Negri, A.P., and Randall, C.J. (2024) Coral-seeding devices with fish-exclusion features reduce mortality on the Great Barrier Reef. Scientific Reports, 14. 13332.

Anthony, Colin J., McDermott, Grace, Lock, Colin, Miller, Therese, Bentlage, Bastian, and Raymundo, Laurie J. (2024) Depth-independent phenotypic variation of massive Porites coral color morphs. Marine Ecology, 45 (1). e12788.

Arbon, P.M., Andrade Martinez, Maria, Garrett, M. Andrade, Jerry, D.R., and Condon, K. (2024) Determining patterns of tissue tropism for IHHNV, GAV and YHV-7 infection in giant black tiger shrimp (Penaeus monodon) using real-time RT-qPCR. Aquaculture, 584. 740680.

Goetze, Jordan S., Heithaus, Michael R., MacNeil, M. Aaron, Harvey, Euan, Simpfendorfer, Colin A., Heupel, Michelle R., Meekan, Mark, Wilson, Shaun, Bond, Mark E., Speed, Conrad W., Currey-Randall, Leanne M., Fisher, Rebecca, Sherman, C. Samantha, Kiszka, Jeremy J., Rees, Matthew J., Udyawer, Vinay, Flowers, Kathryn I., Clementi, Gina M., Asher, Jacob, Beaufort, Océane, Bernard, Anthony T.F., Berumen, Michael L., Bierwagen, Stacy L., Boslogo, Tracey, Brooks, Edward J., Brown, J. Jed, Buddo, Dayne, Cáceres, Camila, Casareto, Sara, Charloo, Venkatesh, Cinner, Joshua E., Clua, Eric E.G., Cochran, Jesse E.M., Cook, Neil, D’Alberto, Brooke M., de Graaf, Martin, Dornhege-Lazaroff, Mareike C., Fanovich, Lanya, Farabaugh, Naomi F., Fernando, Daniel, Ferreira, Carlos Eduardo Leite, Fields, Candace Y.A., Flam, Anna L., Floros, Camilla, Fourqurean, Virginia, Barcia, Laura García, Garla, Ricardo, Gastrich, Kirk, George, Lachlan, Graham, Rory, Hagan, Valerie, Hardenstine, Royale S., Heck, Stephen M., Heithaus, Patricia, Henderson, Aaron C., Hertler, Heidi, Hueter, Robert E., Johnson, Mohini, Jupiter, Stacy D., Kaimuddin, Muslimin, Kasana, Devanshi, Kelley, Megan, Kessel, Steven T., Kiilu, Benedict, Kyne, Fabian, Langlois, Tim, Lawe, Jaedon, Ledee, Elodie J.I., Lindfield, Steve, Maggs, Jade Q., Manjaji-Matsumoto, B. Mabel, Marshall, Andrea, Matich, Philip, McCombs, Erin, McLean, Dianne, Meggs, Llewelyn, Moore, Stephen, Mukherji, Sushmita, Murray, Ryan, Newman, Stephen J., O’Shea, Owen R., Osuka, Kennedy E., Papastamatiou, Yannis P., Perera, Nishan, Peterson, Bradley J., Pina-Amargós, Fabián, Ponzo, Alessandro, Prasetyo, Andhika, Quamar, L. M.Sjamsul, Quinlan, Jessica R., Razafindrakoto, Christelle F., Rolim, Fernanda A., Ruiz-Abierno, Alexei, Ruiz, Hector, Samoilys, Melita A., Sala, Enric, Sample, William R., Schärer-Umpierre, Michelle, Schoen, Sara N., Schlaff, Audrey M., Smith, Adam N.H., Sparks, Lauren, Stoffers, Twan, Tanna, Akshay, Torres, Rubén, Travers, Michael J., Valentin-Albanese, Jasmine, Warren, Joseph D., Watts, Alexandra M., Wen, Colin K., Whitman, Elizabeth R., Wirsing, Aaron J., Zarza-González, Esteban, and Chapman, Demian D. (2024) Directed conservation of the world’s reef sharks and rays. Nature Ecology & Evolution, 8. pp. 1118-1128.

Briggs, Nico D., Page, Cathie A., Giuliano, Christine, Alessi, Cinzia, Hoogenboom, Mia, Bay, Line K., and Randall, Carly J. (2024) Dissecting coral recovery: bleaching reduces reproductive output in Acropora millepora. Coral Reefs, 43. pp. 557-569.

Lechene, Marine A.A., Figueira, Will F., Murray, Nicholas J., Aston, Eoghan A., Gordon, Sophie E., and Ferrari, Renata (2024) Evaluating error sources to improve precision in the co-registration of underwater 3D models. Ecological Informatics, 81. 102632.

Lutzenkirchen, Lucas L., Duce, Stephanie J., and Bellwood, David R. (2024) Exploring benthic habitat assessments on coral reefs: a comparison of direct field measurements versus remote sensing. Coral Reefs, 43. pp. 265-280.

Finucci, Brittany, Pacoureau, Nathan, Rigby, Cassandra L., Matsushiba, Jay H., Faure-Beaulieu, Nina, Samantha Sherman, C., Vanderwright, Wade J., Jabado, Rima W., Charvet, Patricia, Mejía-Falla, Paola A., Navia, Andrés F., Derrick, Danielle H., Kyne, Peter M., Pollom, Riley, Walls, Rachel H.L., Herman, Katelyn B., Kinattumkara, Bineesh, Cotton, Charles F., Cuevas, Juan Martín, Daley, Ross K., Dharmadi, Ebert, David A., Fernando, Daniel, Fernando, Stela M.C., Francis, Malcolm P., Huveneers, Charlie, Ishihara, Hajime, Kulka, David W., Leslie, Robin W., Neat, Francis, Orlov, Alexei M., Rincon, Getulio, Sant, Glenn J., Volvenko, Igor V., Walker, Terence I., Simpfendorfer, Colin A., and Dulvy, Nicholas K. (2024) Fishing for oil and meat drives irreversible defaunation of deepwater sharks and rays. Science Advances, 383 (6687). pp. 1135-1141.

Barnett, Adam, Jaine, Fabrice R.A., Bierwagen, Stacy L., Lubitz, Nicolas, Abrantes, Kátya, Heupel, Michelle R., Harcourt, Robert, Huveneers, Charlie, Dwyer, Ross G., Udyawer, Vinay, Simpfendorfer, Colin A., Miller, Ingo B., Scott-Holland, Tracey, Kilpatrick, Carley S., Williams, Samuel M., Smith, Daniel, Dudgeon, Christine L., Hoey, Andrew S., Fitzpatrick, Richard, Osborne, Felicity E., Smoothey, Amy F., Butcher, Paul A., Sheaves, Marcus, Fisher, Eric E., Svaikauskas, Mark, Ellis, Megan, Kanno, Shiori, Cresswell, Benjamin J., Flint, Nicole, Armstrong, Asia O., Townsend, Kathy A., Mitchell, Jonathan D., Campbell, Matthew, Peddemors, Victor M., Gustafson, Johan A., and Currey-Randall, Leanne M. (2024) From little things big things grow: enhancement of an acoustic telemetry network to monitor broad-scale movements of marine species along Australia’s east coast. Movement Ecology, 12. 31.

Álvarez-Romero, Jorge G., Adams, Vanessa M., Ban, Natalie C., Mills, Morena, and Visconti, Piero (2024) Honoring the legacy of a conservation champion: Bob Pressey (1953-2023). Conservation Biology, 38 (1). e14168.

Garcias-Bonet, Neus, Roik, Anna, Tierney, Braden, García, Francisca C., Villela, Helena D.M., Dungan, Ashley M., Quigley, Kate M., Sweet, Michael, Berg, Gabriele, Gram, Lone, Bourne, David G., Ushijima, Blake, Sogin, Maggie, Hoj, Lone, Duarte, Gustavo, Hirt, Heribert, Smalla, Kornelia, Rosado, Alexandre S., Carvalho, Susana, Thurber, Rebecca Vega, Ziegler, Maren, Mason, Christopher E., van Oppen, Madeleine J.H., Voolstra, Christian R., and Peixoto, Raquel S. (2024) Horizon scanning the application of probiotics for wildlife. Trends in Microbiology, 32 (3). pp. 252-269.

Saleh, Alzayat, Sheaves, Marcus, Jerry, Dean, and Rahimi Azghadi, Mostafa (2024) How to track and segment fish without human annotations: a self-supervised deep learning approach. Pattern Analysis and Applications, 27. 4.

Abrantes, K., Wildermann, N., Miller, I.B., Hamann, M., Limpus, C.J., Hof, C.A. Madden, Bell, I., Sheaves, M., and Barnett, A. (2024) Intraspecific variability in flatback turtle habitat use: δ15N as an indicator of foraging locations. Endangered Species Research, 53. pp. 167-180.

Pell, T.J., McClure, E.C., Emslie, M.J., and Hoey, A.S. (2024) Limited susceptibility of Lobophora to browsing fishes on inshore reefs of the Great Barrier Reef. Coral Reefs, 43. pp. 5-17.

Iskandar, Nur Syuhada, Noor, Noorashikin Md., Che Cob, Zaidi, Das, Simon Kumar, and Kasihmuddin, Sonia (2024) Mahseer conservation in Asia: trends and insights from scientometric analysis. Marine and Freshwater Research, 75. MF24073.

Ritter, Carmen J., and Bourne, David G. (2024) Marine amphipods as integral members of global ocean ecosystems. Journal of Experimental Marine Biology and Ecology, 572. 151985.

Amepou, Yolarnie, Chin, Andrew, Foale, Simon, Sant, Glenn, Smailes, Olivia, and Grant, Michael I. (2024) Maw money, maw problems: A lucrative fish maw fishery in Papua New Guinea highlights a global conservation issue driven by Chinese cultural demand. Conservation Letters, 17 (3). e13006.

Wolanski, Eric, De Le Court, Miguel, Lambrechts, Jonathan, and Kingsford, Michael (2024) Mechanisms enabling the self-recruitment of coral and crown-of-thorns starfish larvae in the Great Barrier Reef. Estuarine, Coastal and Shelf Science, 309. 108976.

Mason, Benjamin, Hayward, David C., Moya, Aurelie, Cooke, Ira, Sorenson, Alanna, Brunner, Ramona, Andrade Rodriguez, Natalia, Huerlimann, Roger, Bourne, David G., Schaeffer, Patrick, Grinblat, Mila, Ravasi, Timothy, Ueda, Nobuo, Tang, Sen-Lin, Ball, Eldon E., and Miller, David J. (2024) Microbiome manipulation by corals and other Cnidaria via quorum quenching. Current Biology, 34. pp. 3226-3232.

Mather, Rachel, Chin, Andrew, Rigby, Cassandra, Cooke, Steven J., Fahmi, Haque, Alifa Bintha, Mizrahi, Meira, and Grant, Michael I. (2024) Murky waters: Assessing the vulnerabilities of Indo-West Pacific non-marine elasmobranchs to inform future conservation planning priorities. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (1). e4039.

Hazel, Julia, Hamann, Mark, Bell, Ian, and Groom, Rachel (2024) Occurrence of leatherback turtles around Australia. Endangered Species Research, 54. pp. 83-91.

Francis, Robin K., Tostevin, Genevieve, Barbasch, Tina, Branconi, Rebecca, Srinivasan, Maya, Jones, Geoffrey P., and Buston, Peter M. (2024) Positive spatial autocorrelation in three habitat quality indicators sets the stage for evolution of adaptive dispersal plasticity in a coral reef fish. Coral Reefs, 43. pp. 69-78.

Mohammadi, Zohre, Bhati, Abhishek Singh, and Jerry, Dean (2024) A Pre-Science Style Model of Aquaculture Tourism Businesses. Tourism Planning & Development, 21 (2). pp. 245-253.

Hernandez, Stephanie, Duce, Stephanie, Sheaves, Marcus, Murray, Nicholas, and Adams, Vanessa M. (2024) Predicting the impacts of clearing on vegetation communities: a model-based approach for identifying conservation priorities in Queensland, Australia. Australasian Journal of Environmental Management, 31 (1). pp. 40-63.

D'Alberto, Brooke M., Clark-Shen, Naomi Catherine, Tingting, Kathy Xu, Green, Madeline E., Hutchinson, Neil, Chin, Andrew, and Simpfendorfer, Colin A. (2024) Preliminary life history of the Critically Endangered bottlenose wedgefish Rhynchobatus australiae from Southeast Asia. Endangered Species Research, 53. pp. 363-378.

Lawless, Sarah, Lau, Jacqueline, Streit, Robert, and Morrison, Tiffany H. (2024) Risks of competing discourses of scientific responsibility in global ocean futures. npj Ocean Sustainability, 3 (44).

Webster, Emily, Duce, Stephanie, Hamann, Mark, Murray, Nicholas, Shimada, Takahiro, and Limpus, Colin (2024) Should I stay or should I go? The influence of environmental conditions on green turtle residence time and outward transit in foraging areas. Marine Biology, 171. 144.

Bellwood, David R., Bellwood, Orpha, Bellwood, Hannah R., and Bellwood, Oliver R. (2024) Sixteenth century recessed armour: evaluating links with the Spanish Armada. Arms and Armour, 21 (1). pp. 48-78.

Neil, Rachel C., Barton, Jonathan A., Dougan, Winona, Dworjanyn, Symon, Heyward, Andrew, Mos, Benjamin, Bourne, David G., and Humphrey, Craig (2024) Size matters: Microherbivores make a big impact in coral aquaculture. Aquaculture, 581. 740402.

Bellwood, David R., Brandl, Simon J., Mcwilliam, Mike, Streit, Robert P., Yan, Helen F., and Tebbett, Sterling B. (2024) Studying functions on coral reefs: past perspectives, current conundrums, and future potential. Coral Reefs, 43. pp. 281-297.

Marzonie, Magena R., Nitschke, Matthew R., Bay, Line K., Bourne, David G., and Harrison, Hugo B. (2024) Symbiodiniaceae diversity varies by host and environment across thermally distinct reefs. Molecular Ecology, 33 (9). e17342.

Cleguer, Christophe, Garrigue, Claire, Fuentes, Mariana M.P.B., Hamann, Mark, Payri, Claude, and Marsh, Helene (2024) Temporal changes in habitat use by dugongs in a spatially restricted coral reef environment. Pacific Conservation Biology, 30 (2). PC23036.

Arbon, P.M., Andrade Martinez, M., Jerry, D.R., and Condon, K. (2024) Towards a 'systems' approach for viral challenge experiments in shrimp: Reporting guidelines for publication. Reviews in Aquaculture, 16 (2). pp. 923-941.

Siddiqi, Aliya C., Bergseth, Brock J., Diedrich, Amy, and Chin, Andrew (2024) Understanding the perceived conservation benefits of shark-marine tourism in the Global South. Marine Policy, 161. 105995.

Dorney, Ryley D., Johnston, Elecia B., Karnaneedi, Shaymaviswanathan, Ruethers, Thimo, Kamath, Sandip D., Gopi, Karthik, Mazumder, Debashish, Sammut, Jesmond, Jerry, Dean, Williamson, Nicholas A., Nie, Shuai, and Lopata, Andreas L. (2024) Variation in Shrimp Allergens: Place of Origin Effects on Food Safety Assessment. International Journal of Molecular Sciences, 25. 4531.

Sheaves, M., Mattone, C., Barnett, A., Abrantes, K., Bradley, M., Sheaves, A., Sheaves, J., and Waltham, N.J. (2024) Whale sharks as oceanic nurseries for Golden Trevally. Pacific Conservation Biology, 30 (1). PC23004.

Voolstra, Christian R., Raina, Jean Baptiste, Dörr, Melanie, Cárdenas, Anny, Pogoreutz, Claudia, Silveira, Cynthia B., Mohamed, Amin R., Bourne, David G., Luo, Haiwei, Amin, Shady A., and Peixoto, Raquel S. (2024) The coral microbiome in sickness, in health and in a changing world. Nature Reviews Microbiology, 22. pp. 460-475.

Bradley, Michael, Dubuc, Alexia, Piggott, Camilla V.H., Sambrook, Katie, Hoey, Andrew S., Depczynski, Martial, Langlois, Tim J., Gagliano, Monica, Wilson, Shaun K., Cure, Katherine, Holmes, Thomas H., Moore, Glenn I., Travers, Michael, Baker, Ronald, Nagelkerken, Ivan, and Sheaves, Marcus (2024) The fish–mangrove link is context dependent: Tidal regime and reef proximity determine the ecological role of tropical mangroves. Fish and Fisheries, 25 (3). pp. 523-541.

Cumming, Graeme, James, Nicholas L., Chua, Chia-Miin, and Huertas, Victor (2024) A framework and review of evidence of the importance of coral reefs for marine birds in tropical ecosystems. Ecology and Evolution, 14 (8). e70165.

Clark-Shen, N., Chin, A., Domingos, J., and Hutchinson, N. (2024) The life (history), diet and death of the blackspot shark (Carcharhinus sealei) from South-east Asia. Marine and Freshwater Research, 75. MF24099.

Willis-Norton, Ellen, Mangin, Tracey, Schroeder, Donna, Cabral, Reniel B., and Gaines, Steven D. (2024) A synthesis of socioeconomic and sociocultural indicators for assessing the impacts of offshore renewable energy on fishery participants and fishing communities. Marine Policy, 161. 106013.

Pytka, J.M., Kyne, P.M., Carlson, J.K., Wosnick, N., and Jabado, R.W. (2024) A tangled web: global review of fishing interactions with rhino rays. Reviews in Fish Biology and Fisheries, 34. pp. 131-160.

Intriago, Pablo, Medina, Andres, Espinoza, Jorge, Enriquez, Xavier, Arteaga, Kelly, Aranguren, Luis Fernando, Shinn, Andrew P., and Romero, Xavier (2023) Acute mortality of Penaeus vannamei larvae in farm hatcheries associated with the presence of Vibrio sp. carrying the VpPirAB toxin genes. Aquaculture International, 31. pp. 3363-3382.

Harrison, H.B., Drane, L., Cresswell, B.J., Evans, R.D., Galbraith, G.F., Srinivasan, M., Taylor, B.M., Williamson, D.H., and Jones, G.P. (2023) Ageing of juvenile coral grouper (Plectropomus maculatus) reveals year-round spawning and recruitment: implications for seasonal closures. Proceedings of the Royal Society of London Series B, Biological Sciences, 290. 20230584.

Digamadulla, Dayananda Senathera, Asoka, Jayasinghe M., Jones, Clive, Jayasinghe‐Mudalige, Udith K., Wijenayake, W. M. H. Kelum, Amarasinghe, Upali S., and de Croos, M. D. S. T. (2023) Appraisal of culture‐based fisheries of giant freshwater prawn (Macrobrachium rosenbergii, De Man, 1879) in reservoirs of Sri Lanka. Aquaculture, Fish and Fisheries, 3 (1). pp. 81-95.

Miller, Michaela E., Motti, Cherie A., Hamann, Mark, and Kroon, Frederieke J. (2023) Assessment of microplastic bioconcentration, bioaccumulation and biomagnification in a simple coral reef food web. Science of the Total Environment, 858. 159615.

Hutson, Kate S., Davidson, Ian C., Bennett, Jerusha, Poulin, Robert, and Cahill, Patrick L. (2023) Assigning cause for emerging diseases of aquatic organisms. Trends in Microbiology, 31 (7). pp. 681-691.

Monk, Christopher T., Power, Michael, Freitas, Carla, Harrison, Philip M., Heupel, Michelle, Kuparinen, Anna, Moland, Even, Simpfendorfer, Colin, Villegas-Ríos, David, and Olsen, Esben M. (2023) Atlantic cod individual spatial behaviour and stable isotope associations in a no-take marine reserve. Journal of Animal Ecology, 92 (12). pp. 2333-2347.

Walker, S.E., Sheaves, M., and Waltham, N.J. (2023) Barriers to Using UAVs in Conservation and Environmental Management: A Systematic Review. Environmental Management, 71. pp. 1052-1064.

Wright, Raven M., Beaman, Robin J., Daniell, James, Bridge, Tom C.L., Pall, Jodie, and Webster, Jody M. (2023) Benthic communities of the lower mesophotic zone on One Tree shelf edge, southern Great Barrier Reef, Australia. Marine and Freshwater Research, 74 (13). pp. 1178-1192.

Tebbett, Sterling B., Connolly, Sean R., and Bellwood, David R. (2023) Benthic composition changes on coral reefs at global scales. Nature Ecology and Evolution, 7 (1). pp. 71-81.

Tebbett, Sterling B., Schlaefer, Jodie A., Bowden, Casey L., Collins, William P., Hemingson, Christopher R., Ling, Scott D., Morais, Juliano, Morais, Renato A., Siqueira, Alexandre C., Streit, Robert P., Swan, Sam, and Bellwood, David R. (2023) Bio-physical determinants of sediment accumulation on an offshore coral reef: A snapshot study. Science of the Total Environment, 895. 165188.

Frøland Steindal, Inga A., Yamamoto, Yoshiyuki, and Whitmore, David (2023) Blind fish have cells that see light. Proceedings of the Royal Society of London B: Biological Sciences, 290 (2002). 20230981.

Sutcliffe, Sarah, Lau, Jacqueline D., Barnes, MicheleL., Mbaru, Emmanuel, Wade, Eric, Hungito, Wilda, Muly, Innocent Mulwodo, Wanyonyi, Stephen, Muthiga, Nyawira A., Cohen, Philippa J., and Cinner, Joshua (2023) COVID-19 impacts on food systems in fisheries-dependent island communities. Ecology and Society, 28 (1). 1.

Marcoli, Roberta, Symonds, Jane E., Walker, Seumas P., Battershill, Christopher N., and Bird, Steve (2023) Characterising the Physiological Responses of Chinook Salmon (Oncorhynchus tshawytscha) Subjected to Heat and Oxygen Stress. Biology, 12. 1342.

Pei, Yingbing, Deng, Zhixiong, Zhang, Xiuping, Blair, David, Hu, Wei, and Yin, Mingbo (2023) Chromosome-scale genome assembly of the freshwater cladoceran crustacean Chydorus sphaericus: A resource for discovery of genes responsive to ecological challenges. Aquatic Toxicology, 260. 106565.

Bergseth, Brock J., Arias, Adrian, Barnes, Michele L., Caldwell, Iain, Datta, Amber, Gelcich, Stefan, Ham, Sam H., Lau, Jacqueline D., Ruano-Chamorro, Cristina, Smallhorn-West, Patrick, Weekers, Damian, Zamborain-Mason, Jessica, and Cinner, Joshua E. (2023) Closing the compliance gap in marine protected areas with human behavioural sciences. Fish and Fisheries, 24. pp. 695-704.

Hutchings, Marissa J., Hamann, Mark, Smithers, Scott G., Daley, Emily, and Birtles, R. Alastair (2023) Color pattern complexity in dwarf minke whales (Balaenoptera acutorostrata) of the northern Great Barrier Reef of Australia. Marine Mammal Science, 39 (3). pp. 780-793.

De Vos, Bas C., Cyrus, Mark D., Macey, Brett M., Batik, Theodore, and Bolton, John J. (2023) Combining computer vision and standardised protocols for improved measurement of live sea urchins for research and industry. Aquaculture, Fish and Fisheries, 3 (6). pp. 507-517.

Shen, Xueyan, Yáñez, José M., Gomes, Giana, Poon, Zhi Weng Josiah, Foster, Derick, Alarcon, Jorge, and Domingos, Jose A. (2023) Comparative gonad transcriptome analysis in cobia (Rachycentron canadum). Frontiers in Genetics, 14. 1128943.

Chew, Xian Zhe, Gibson-Kueh, Susan, Jerry, Dean R., and Shen, Xueyan (2023) Comparison of intestinal bacterial communities in asymptomatic and diseased Asian seabass (Lates calcarifer) with chronic enteritis and mixed bacterial infections. Aquaculture, 572. 739516.

Diggins, Rebecca L., Grimm, Jessica, Mendez, Diana, Jones, Karina, Hamann, Mark, Bell, Ian, and Ariel, Ellen (2023) Confirmed feasibility of a satellite tracker attachment method on small juvenile hawksbill turtles Eretmochelys imbricata. Marine Ecology Progress Series, 704. pp. 119-130.

Pacoureau, Nathan, Carlson, John K., Kindsvater, Holly K., Rigby, Cassandra L., Winker, Henning, Simpfendorfer, Colin A., Charvet, Patricia, Pollom, Riley A., Barreto, Rodrigo, Samantha Sherman, C., Talwar, Brendan S., Skerritt, Daniel J., Rashid Sumaila, U., Matsushiba, Jay H., VanderWright, Wade J., Yan, Helen F., and Dulvy, Nicholas K. (2023) Conservation successes and challenges for wide-ranging sharks and rays. Proceedings of the National Academy of Sciences of the United States of America, 120 (5). e2216891120.

Lubitz, Nicolas, Daly, Ryan, Filmalter, John D., Sheaves, Marcus, Cowley, Paul D., Naesje, Tor F., and Barnett, Adam (2023) Context drives movement patterns in a mobile marine predator. Movement Ecology, 11. 28.

Cresswell, B.J., Galbraith, G.F., Harrison, H.B., McCormick, M.I., and Jones, G.P, (2023) Coral reef pinnacles act as ecological magnets for the abundance, diversity and biomass of predatory fishes. Marine Ecology Progress Series, 717. pp. 143-156.

Chen, Xuelei, Xu, Tian, Dowse, Harold B., Tao, Yi, Zeng, Chaoshu, Zhao, Fanyi, Ye, Haihui, and Guo, Donghui (2023) Correlation between transport and moulting of catadromous crab megalopae: The effects of starvation on rhythmic vertical migration. Marine and Freshwater Behaviour and Physiology, 56 (1-2). pp. 1-18.

McGowan, Alexandra M., Lanyon, Janet M., Clark, Nicholas, Blair, David, Marsh, Helene, Wolanski, Eric, and Seddon, Jennifer M. (2023) Cryptic marine barriers to gene flow in a vulnerable coastal species, the dugong (Dugong dugon). Marine Mammal Science, 39 (3). pp. 918-939.

Douglas, Sophia R.L., Tebbett, Sterling B., Choukroun, Severine, Goatley, Christopher H.R., and Bellwood, David R. (2023) Depth stratified light trap sampling reveals variation in the depth distribution of late-stage cryptobenthic reef fish larvae. Coral Reefs, 42 (2). pp. 507-512.

Önal, Hayri, Pressey, Robert L., Kerley, Graham I.H., and Ridges, Malcolm (2023) Designing an Extensive Conservation Reserve Network with Economic, Ecological and Spatial Criteria. Environmental Modeling and Assessment, 28. pp. 585-598.

Vu, Nga T.T., Jerry, Dean R., Edmunds, Richard C., Jones, David B., and Zenger, Kyall R. (2023) Development of a global SNP resource for diversity, provenance, and parentage analyses on the Indo-Pacific giant black tiger shrimp (Penaeus monodon). Aquaculture, 563 (1). 738890.

Smith, Hillary A., Chen, Carla C. M., Pollock, F. Joseph, Re, Morgan, Willis, Bette L., and Bourne, David G. (2023) Drivers of coral mortality in non-acute disturbance periods. Marine Ecology Progress Series, 717. pp. 37-50.

Xu, Tian, and Zeng, Chaoshu (2023) Effects of salinity on larval survival and development of the decorator crab Camposcia retusa and food consumption patterns of megalopae. Aquaculture, 562. 738753.

Cabral, Reniel B., Geronimo, Rollan C., Mamauag, Samuel S., Silva, Juan A., Mancao, Roquelito H., and Atrigenio, Michael P. (2023) Ensuring Aquatic Food Security in the Philippines. The Philippine Journal of Fisheries, 30 (2). pp. 298-313.

Cork, Steven, Alexandra, Carla, Alvarez-Romero, Jorge G., Bennett, Elena M., Berbés-Blázquez, Marta, Bohensky, Erin, Bok, Barbara, Costanza, Robert, Hashimoto, Shizuka, Hill, Rosemary, Inayatullah, Sohail, Kok, Kasper, Kuiper, Jan J., Moglia, Magnus, Pereira, Laura, Peterson, Garry, Weeks, Rebecca, and Wyborn, Carina (2023) Exploring Alternative Futures in the Anthropocene. Annual Review of Environment and Resources, 48. pp. 25-54.

Kemink, Kaylan, Diedrich, Amy, Adams, Vanessa M., and Pressey, Robert L. (2023) Exploring motives for participation in a perpetual easement program: Going beyond financial incentives. Biological Conservation, 284. 110193.

Candebat, Caroline Lordes, Eddie, Thibault, Marc, Adrien Francois, Fernando, Fernando, and Nankervis, Leo (2023) Exploring the physiological plasticity of giant grouper (Epinephelus lanceolatus) to dietary sulfur amino acids and taurine to measure dietary requirements and essentiality. Fish Physiology and Biochemistry, 49. pp. 829-851.

Baird, Andrew, Prior, Susan, Bridge, Thomas, and Cowman, Peter (2023) First records of coral spawning on Norfolk Island. Galaxea, Journal of Coral Reef Studies, 25 (1). pp. 3-4.

Virdin, John, Basurto, Xavier, Nico, Gianluigi, Harper, Sarah, del Mar Mancha-Cisneros, Maria, Vannuccini, Stefania, Ahern, Molly, Anderson, Christopher M., Funge-Smith, Simon, Gutierrez, Nicolas L., Mills, David J., and Franz, Nicole (2023) Fishing for subsistence constitutes a livelihood safety net for populations dependent on aquatic foods around the world. Nature Food, 4. pp. 874-885.

Eustache, Kim B., Boissin, Émilie, Tardy, Céline, Bouyoucos, Ian A., Rummer, Jodie L., and Planes, Serge (2023) Genetic evidence for plastic reproductive philopatry and matrotrophy in blacktip reef sharks (Carcharhinus melanopterus) of the Moorea Island (French Polynesia). Scientific Reports, 13. 14913.

Lau, Sally C. Y., Wilson, Nerida G., Golledge, Nicholas R., Naish, Tim R., Watts, Phillip C., Silva, Catarina N. S., Cooke, Ira R., Allcock, A. Louise, Mark, Felix C., Linse, Katrin, and Strugnell, Jan M. (2023) Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science, 382. pp. 1384-1389.

Lau, Sally C.Y., Strugnell, Jan M., Sands, Chester J., Silva, Catarina N.S., and Wilson, Nerida G. (2023) Genomic insights of evolutionary divergence and life histories innovations in Antarctic brittle stars. Molecular Ecology, 32 (13). pp. 3382-3402.

Lemke, L.R., and Simpfendorfer, C.A. (2023) Gillnet size selectivity of shark and ray species from Queensland, Australia. Fisheries Management and Ecology, 30 (3). pp. 300-309.

Giri, Nyoman Adiasmara, Irvin, Simon, Haryanti, Sudewi, Selamet, Bejo, Jones, Clive M., and Mujiono (2023) Growth Response of Lobster Panulirus homarus Reared in Tanks and in Floating Net Cages Fed with Compound and Fresh Feed. Sains Malaysiana, 52 (10). pp. 2747-2759.

Sherman, C. Samantha, Simpfendorfer, Colin A., Pacoureau, Nathan, Matsushiba, Jay H., Yan, Helen F., Walls, Rachel H.L., Rigby, Cassandra L., Vanderwright, Wade J., Jabado, Rima W., Pollom, Riley A., Carlson, John K., Charvet, Patricia, Bin Ali, Ahmad, Fahmi, Cheok, Jessica, Derrick, Danielle H., Herman, Katelyn B., Finucci, Brittany, Eddy, Tyler D., Palomares, Maria Lourdes D., Avalos-Castillo, Christopher G., Kinattumkara, Bineesh, Blanco-Parra, María del Pilar, Dharmadi, Espinoza, Mario, Fernando, Daniel, Haque, Alifa B., Mejía-Falla, Paola A., Navia, Andrés F., Pérez-Jiménez, Juan Carlos, Utzurrum, Jean, Yuneni, Ranny R., and Dulvy, Nicholas K. (2023) Half a century of rising extinction risk of coral reef sharks and rays. Nature Communications, 14. 15.

Quigley, Kate M., Alvarez-Roa, Carlos, Raina, Jean Baptiste, Pernice, Mathieu, and van Oppen, Madeleine J.H. (2023) Heat-evolved microalgal symbionts increase thermal bleaching tolerance of coral juveniles without a trade-off against growth. Coral Reefs, 42. pp. 1227-1232.

Nankervis, Leo (2023) How are some fish able to change colour or complexion depending on their mood? Townsville Bulletin, 1 July 2023. p. 61.

Seebacher, Frank, Narayan, Edward, Rummer, Jodie L., Tomlinson, Sean, and Cooke, Steven J. (2023) How can physiology best contribute to wildlife conservation in a warming world? Conservation Physiology, 11 (1). coad038.

Pattiselanno, Freddy, Lloyd, Janice K.F., Krockenberger, Andrew, Arobaya, Agustina Y.S., and Sheil, Douglas (2023) Hunting in Indonesian New Guinea: dogs, conservation and culture. Ethnobiology and Conservation, 12.

Pattiselanno, Freddy, Tokede, Max J., Arobaya, Agustina Y.S., Mardiatmoko, Gun, and Pattiselanno, August E. (2023) Hunting introduced species in Indonesia New Guinea. Biodiversitas, 24 (5). pp. 3045-3050.

Udayantha, H.M.V., Lee, Sukkyoung, Liyanage, D.S., Lim, Chaehyeon, Jeong, Taehyug, Omeka, W.K.M., Yang, Kyerim, Kim, Gaeun, Lee, Jihun, Nadarajapillai, Kishanthini, Ganeshalingam, Subothini, Park, Cheong-Uk, Lee, Jiwon, Oh, Seong-Rip, Gong, Po, Jang, Yeounghwan, Hyun, Jaemin, Park, Aejen, Koh, Hyoung-Bum, Kim, Mun-Kwan, Jones, David B., Massault, Cecile, Jerry, Dean R., and Lee, Jeehee (2023) Identification of candidate variants and genes associated with temperature tolerance in olive flounders by Genome-Wide Association Study (GWAS). Aquaculture, 576. 739858.

Silveira, Mayara M., Donelson, Jennifer M., McCormick, Mark I., Araujo-Silva, Heloysa, and Luchiari, Ana C. (2023) Impact of ocean warming on a coral reef fish learning and memory. PeerJ, 11. e15729.

Lang, Bethan J., Donelson, Jennifer M., Bairos-Novak, Kevin R., Wheeler, Carolyn R., Caballes, Ciemon F., Uthicke, Sven, and Pratchett, Morgan S. (2023) Impacts of ocean warming on echinoderms: A meta‐analysis. Ecology and Evolution, 13 (8). e10307.

Chandler, Josie F., Burn, Deborah, Caballes, Ciemon F., Doll, Peter C., Kwong, Sarah L.T., Lang, Bethan J., Pacey, Kai I., and Pratchett, Morgan S. (2023) Increasing densities of Pacific crown-of-thorns starfish (Acanthaster cf. solaris) at Lizard Island, northern Great Barrier Reef, resolved using a novel survey method. Scientific Reports, 13 (1). 19306.

Doll, Peter C., Uthicke, Sven, Caballes, Ciemon F., Patel, Frances, Gomez Cabrera, Maria del C., Lang, Bethan J., and Pratchett, Morgan S. (2023) Induction of larval settlement in crown-of-thorns starfish is not mediated by conspecific cues. Scientific Reports, 13. 17119.

Genodepa, Jerome, Zeng, Chaoshu, Militz, Thane A., and Southgate, Paul C. (2023) Influence of Live-Food (Brachionus rotundiformis) Density at First-Feeding on Digestive Enzyme Activities in Newly Hatched (Zoea I) Larvae of the Mud Crab, Scylla serrata. Journal of Shellfish Research, 42 (3). pp. 517-523.

Genodepa, Jerome, Zeng, Chaoshu, Militz, Thane A., and Southgate, Paul C. (2023) Influence of Moult Cycles on Digestive Enzyme Activities during Early Larval Stages of Panulirus ornatus. Aquaculture Research, 2023. 9956046.

Marangon, Emma, Uthicke, Sven, Patel, Frances, Marzinelli, Ezequiel M., Bourne, David G., Webster, Nicole S., and Laffy, Patrick W. (2023) Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 32 (20). pp. 5645-5660.

Saleh, Alzayat, Jones, David, Jerry, Dean, and Azghadi, Mostafa Rahimi (2023) MFLD-net: a lightweight deep learning network for fish morphometry using landmark detection. Aquatic Ecology, 57. pp. 913-931.

Wada, Naohisa, Iguchi, Akira, Urabe, Yuta, Yoshioka, Yuki, Abe, Natsumi, Takase, Kazuki, Hayashi, Shuji, Kawanabe, Saeko, Sato, Yui, Tang, Sen-Lin, and Mano, Nobuhiro (2023) Microbial mat compositions and localization patterns explain the virulence of black band disease in corals. npj Biofilms and Microbiomes, 9. 15.

Doll, Peter (2023) Microscopic starfish and how to find them: Developing a molecular-based approach to measure crown-of-thorns-starfish settlement rates. Reef in Review, 2023. pp. 48-49.

Le, Thanh Hoa, Nguyen, Khue Thi, Pham, Linh Thi Khanh, Doan, Huong Thi Thanh, Roan, Do Thi, Le, Xuyen Thi Kim, Agatsuma, Takeshi, and Blair, David (2023) Mitogenomic and nuclear ribosomal transcription unit datasets support the synonymy of Paragonimus iloktsuenensis and P. ohirai (Paragonimidae: Platyhelminthes). Parasitology Research, 122. pp. 1531-1544.

Budd, Alyssa M., Schils, Tom, Cooper, Madalyn K., Lyons, Mitchell B., Mills, Matthew S., Deinhart, Mari E., Le Port, Agnes, Huerlimann, Roger, and Strugnell, Jan M. (2023) Monitoring threatened species with environmental DNA and open ecological data: Local distribution and habitat preferences of scalloped hammerhead sharks (Sphyrna lewini). Biological Conservation, 278 (February 2023). 109881.

Streit, Robert P., and Bellwood, David R. (2023) Moving beyond the one true trait. Trends in Ecology & Evolution, 38 (11). pp. 1014-1015.

Leahy, Susannah M., Jerry, Dean R., Wedding, Brett B.C., Robins, Julie, Wright, Carole L., Sadekov, Aleksey, David, Stephen B., Jones, David B., Williams, Samuel M., Grauf, Steve, Pavich, Luke, McLennan, Mark, Sellini, Michelle J., Goldsbury, Julie A., and Saunders, Richard J. (2023) Multimethod approach to advance provenance determination of fish in stocked systems. Canadian Journal of Fisheries and Aquatic Sciences, 80. pp. 1410-1424.

Jeong, So Young, Gabrielson, Paul W., Hughey, Jeffery R., Hoey, Andrew S., Cho, Tae Oh, Abdul Wahab, Muhammad A., and Diaz-Pulido, Guillermo (2023) New branched Porolithon species (Corallinales, Rhodophyta) from the Great Barrier Reef, Coral Sea, and Lord Howe Island. Journal of Phycology, 59 (6). pp. 1179-1201.

McCormick, M.I., Fakan, E.P., Vamvounis, G., Bosshard, S., Moad, C., Smyth, E., Gatenby, P., Edmiston, J., Patel, K., and Allan, B.J.M. (2023) No effects of plasticized microplastics on the body condition and reproduction of a marine fish. ICES Journal of Marine Science, 80 (5). pp. 1267-1276.

Gress Hernandez, Erika, Bridge, Tom, Fyfe, Justin, and Galbraith, Gemma (2023) Novel Interaction between a Rabbitfish and Black Corals. Oceans, 4. pp. 236-241.

Tebbett, Sterling B., Crisp, Samantha K., Evans, Richard D., Fulton, Christopher J., Pessarrodona, Albert, Wernberg, Thomas, Wilson, Shaun K., and Bellwood, David R. (2023) On the Challenges of Identifying Benthic Dominance on Anthropocene Coral Reefs. BioScience, 73 (3). pp. 220-228.

Siqueira Correa, Alexandre C., Muruga, Pooventhran, and Bellwood, David R. (2023) On the evolution of fish–coral interactions. Ecology Letters, 26 (8). pp. 1348-1358.

Marc, Adrien, Guppy, Jarrod L., Marshall, Hayley, Jerry, Dean R., Rudd, Donna, and Paris, Damien B.B.P. (2023) Optimization of a non-activating medium for short-term chilled storage of barramundi (Lates calcarifer) testicular spermatozoa. Fish Physiology and Biochemistry, 49. pp. 559-576.

Carvalho, Raquel L., Resende, Angelica F., Barlow, Jos, França, Filipe M., Moura, Mario R., Maciel, Rafaella, Alves-Martins, Fernanda, Shutt, Jack, Nunes, Cassio A., Elias, Fernando, Silveira, Juliana M., Stegmann, Lis, Baccaro, Fabricio B., Juen, Leandro, Schietti, Juliana, Aragão, Luiz, Berenguer, Erika, Castello, Leandro, Costa, Flavia R.C., Guedes, Matheus L., Leal, Cecilia G., Lees, Alexander C., Isaac, Victoria, Nascimento, Rodrigo O., Phillips, Oliver L., Schmidt, Fernando Augusto, ter Steege, Hans, Vaz-de-Mello, Fernando, Venticinque, Eduardo M., Vieira, Ima Célia Guimarães, Zuanon, Jansen, The Synergize Consortium, [Laurance, William], [Laurance, Susan], and [Rechetelo, Juliana] (2023) Pervasive gaps in Amazonian ecological research. Current Biology, 33 (16). 3495-3504.e4.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Pinheiro, Hudson T., MacDonald, Chancey, Santos, Robson, Ali, Ramadhoine, Bobat, Ayesha, Cresswell, Benjamin J., Francini-Filho, Ronaldo, Freitas, Rui, Galbraith, Gemma F., Musembi, Peter, Phelps, Tyler A., Quimbayo, Juan P., Quiros, T.E. Angela L., Shepherd, Bart, Stefanoudis, Paris V., Talma, Sheena, Teixeira, João B., Woodall, Lucy C., and Rocha, Luiz A. (2023) Plastic pollution on the world's coral reefs. Nature, 619 (7969). pp. 311-316.

Welch, David J., Smith, Adam K., Krusic-Golub, Kyne, Erdmann, Sandra, and Newman, Stephen J. (2023) Preliminary age-based life history characteristics of the dogtooth tuna, Gymnosarda unicolor (Ruppell, 1838), in the southwest Pacific Ocean. Aquaculture and Fisheries, 8 (3). pp. 323-331.

Hughes, Terry P., Baird, Andrew H., Morrison, Tiffany H., and Torda, Gergely (2023) Principles for coral reef restoration in the anthropocene. One Earth, 6 (6). pp. 656-665.

Adams, Vanessa M., Butt, Nathalie, Allen, Stuart, Pressey, Robert L., Engert, Jayden E., and Gallagher, Rachael V. (2023) Protected, cleared, or at risk: The fate of Australian plant species under continued land use change. Biological Conservation, 284. 110201.

Donelson, J.M., Gaitan-Espitia, J.D., Hobday, A.J., Mokany, K., Andrew, S.C., Boulter, S., Cook, C.N., Dickson, F., Macgregor, N.A., Mitchell, N.J., Pickup, M., and Fox, R.J. (2023) Putting plasticity into practice for effective conservation actions under climate change. Nature Climate Change, 13 (7). pp. 632-647.

Saper, Julia, Høj, Lone, Humphrey, Craig, and Bourne, David G. (2023) Quantifying capture and ingestion of live feeds across three coral species. Coral Reefs, 42. pp. 931-943.

Debaere, Shamil F., Weideli, Ornella C., Bouyoucos, Ian, Eustache, Kim B., Trujillo, José E., De Boeck, Gudrun, Planes, Serge, and Rummer, Jodie L. (2023) Quantifying changes in umbilicus size to estimate the relative age of neonatal blacktip reef sharks (Carcharhinus melanopterus). Conservation Physiology, 11 (1). coad028.

Nesa, Nur Un, Elliott, Lisa, Zeng, Chaoshu, Jones, Rhondda, and Cavalieri, John (2023) Redclaw, Cherax quadricarinatus sex-separated rearing strategy enhances reproduction in females. Aquaculture, 573. 739592.

Bansemer, Matthew S., Salini, Michael J., Nankervis, Leo, and Stone, David A.J. (2023) Reducing dietary wild derived fishmeal inclusion levels in production diets for large yellowtail kingfish (Seriola lalandi). Aquaculture, 572. 739487.

Atwood, Trisha B., Sala, Enric, Mayorga, Juan, Bradley, Darcy, Cabral, Reniel B., Auber, Arnaud, Cheung, William, Ferretti, Francesco, Friedlander, Alan M., Gaines, Steven D., Garilao, Cristina, Goodell, Whitney, Halpern, Benjamin S., Hinson, Audra, Kaschner, Kristin, Kesner-Reyes, Kathleen, Leprieur, Fabien, McGowan, Jennifer, Morgan, Lance E., Mouillot, David, Palacios-Abrantes, Juliano, Possingham, Hugh P., Rechberger, Kristin D., Worm, Boris, and Lubchenco, Jane (2023) Reply to: Quantifying the carbon benefits of ending bottom trawling. Nature, 617 (7960). E3-E5.

Cumming, Graeme S., Adamska, Maja, Barnes, Michele L., Barnett, Jon, Bellwood, David R., Cinner, Joshua E., Cohen, Philippa J., Donelson, Jennifer M., Fabricius, Katharina, Grafton, R. Quentin, Grech, Alana, Gurney, Georgina G., Hoegh-Guldberg, Ove, Hoey, Andrew S., Hoogenboom, Mia O., Lau, Jacqueline, Lovelock, Catherine E., Lowe, Ryan, Miller, David J., Morrison, Tiffany H., Mumby, Peter J., Nakata, Martin, Pandolfi, John M., Peterson, Garry D., Pratchett, Morgan S., Ravasi, Timothy, Riginos, Cynthia, Rummer, Jodie L., Schaffelke, Britta, Wernberg, Thomas, and Wilson, Shaun K. (2023) Research priorities for the sustainability of coral-rich western Pacific seascapes. Regional Environmental Change, 23 (2). 66.

Zhang, Xiuping, Wolinska, Justyna, Blair, David, Hu, Wei, and Yin, Mingbo (2023) Responses to predation pressure involve similar sets of genes in two divergent species of Daphnia. Journal of Animal Ecology, 92 (9). pp. 1743-1758.

Adams, Vanessa M., Álvarez-Romero, Jorge G., Ban, Natalie C., Mills, Morena, and Visconti, Piero (2023) Robert L. Pressey (1953-2023). Nature Ecology & Evolution, 7 (12). pp. 1957-1958.

Panero, Marta, Galbraith, G.F., Srinivasan, M., and Jones, G.P. (2023) Roles of depth, current speed, and benthic cover in shaping gorgonian assemblages at the Palm Islands (Great Barrier Reef). Coral Reefs, 42. pp. 1045-1057.

Whitelaw, Brooke, Finn, Julian K., Zenger, Kyall R., Cooke, Ira R., Morse, Peter, and Strugnell, Jan M. (2023) SNP data reveals the complex and diverse evolutionary history of the blue-ringed octopus genus (Octopodidae: Hapalochlaena) in the Asia-Pacific. Molecular Phylogenetics and Evolution, 186. 107827.

Udyawer, Vinay, Huveneers, Charlie, Jaine, Fabrice, Babcock, Russell C., Brodie, Stephanie, Buscot, Marie Jeanne, Campbell, Hamish A., Harcourt, Robert G., Hoenner, Xavier, Ledee, Elodie J.I., Simpfendorfer, Colin A., Taylor, Matthew D., Armstrong, Asia, Barnett, Adam, Brown, Culum, Bruce, Barry, Butcher, Paul A., Cadiou, Gwenael, Couturier, Lydie I.E., Currey-Randall, Leanne, Drew, Michael, Dudgeon, Christine L., Dwyer, Ross G., Espinoza, Mario, Ferreira, Luciana C., Fowler, Anthony, Harasti, David, Harborne, Alastair R., Knott, Nathan A., Lee, Kate, Lloyd, Matt, Lowry, Michael, Marzullo, Teagan, Matley, Jordan, Mcallister, Jaime D., McAuley, Rory, McGregor, Frazer, Meekan, Mark, Mills, Kade, Norman, Bradley M., Oh, Beverly, Payne, Nicholas L., Peddemors, Vic, Piddocke, Toby, Pillans, Richard D., Reina, Richard D., Rogers, Paul, Semmens, Jayson M., Smoothey, Amy, Speed, Conrad W., van der Meulen, Dylan, and Heupel, Michelle (2023) Scaling of Activity Space in Marine Organisms across Latitudinal Gradients. American Naturalist, 201 (4). pp. 586-602.

Smith, Hillary A., Fulton, Stella E., McLeod, Ian M., Page, Cathie A., and Bourne, David G. (2023) Sea-weeding: Manual removal of macroalgae facilitates rapid coral recovery. Journal of Applied Ecology, 60 (11). pp. 2459-2471.

Borland, Hayden P., Gilby, Ben L., Henderson, Christopher J., Connolly, Rod M., Gorissen, Bob, Ortodossi, Nicholas L., Rummell, Ashley L., Nagelkerken, Ivan, Pittman, Simon J., Sheaves, Marcus, and Olds, Andrew D. (2023) Seafloor Terrain Shapes the Three-dimensional Nursery Value of Mangrove and Seagrass Habitats. Ecosystems, 26. pp. 442-456.

Cardozo-Ferreira, G.C., Ferreira, C.E.I., Choat, J.H., Mendes, T.C., Macieira, R.M., Rezende, C.E., Joyeux, J.C., and Clements, K.D. (2023) Seasonal variation in diet and isotopic niche of nominally herbivorous fishes in subtropical rocky reefs. Marine Ecology Progress Series, 722. pp. 125-143.

Madin, Joshua S., McWilliam, Michael, Quigley, Kate, Bay, Line K., Bellwood, David, Doropoulos, Christopher, Fernandes, Leanne, Harrison, Peter, Hoey, Andrew S., Mumby, Peter J., Ortiz, Juan C., Richards, Zoe T., Riginos, Cynthia, Schiettekatte, Nina M.D., Suggett, David J., and van Oppen, Madeleine J.H. (2023) Selecting coral species for reef restoration. Journal of Applied Ecology, 60 (8). pp. 1537-1544.

Mitchell, J.D., Drymon, J.M., Vardon, J., Coulson, P.G., Simpfendorfer, C.A., Scyphers, S.B., Kajiura, S.M., Hoel, K., Williams, S., Ryan, K.L., Barnett, A., Heupel, M.R., Chin, A., Navarro, M., Langlois, T., Ajemian, M.J., Gilman, E., Prasky, E., and Jackson, G. (2023) Shark depredation: future directions in research and management. Reviews in Fish Biology and Fisheries, 33. pp. 475-499.

Hasenei, Aaron, Donelson, Jennifer M., Ravasi, Timothy, and Rummer, Jodie L. (2023) Sharks and their relatives: can their past help predict their future? Frontiers in Marine Science, 10. 1268532.

Clark-Shen, Naomi, Chin, Andrew, Arunrugstichai, Sirachai, Labaja, Jessica, Mizrahi, Meira, Simeon, Benaya, and Hutchinson, Neil (2023) Status of Southeast Asia's marine sharks and rays. Conservation Biology, 37 (1). e13962.

Galbraith, Gemma F., Cresswell, Benjamin J., McCormick, Mark I., and Jones, Geoffrey P. (2023) Strong hydrodynamic drivers of coral reef fish biodiversity on submerged pinnacle coral reefs. Limnology and Oceanography, 68 (11). pp. 2415-2430.

González-Murcia, Saúl, Ekins, Merrick, Bridge, Tom C.L., Battershill, Christopher N., and Jones, Geoffrey P. (2023) Substratum selection in coral reef sponges and their interactions with other benthic organisms. Coral Reefs, 42 (2). pp. 427-442.

Zamborain-Mason, Jessica, Cinner, Joshua E., MacNeil, M. Aaron, Graham, Nicholas A.J., Hoey, Andrew S., Beger, Maria, Brooks, Andrew J., Booth, David J., Edgar, Graham J., Feary, David A., Ferse, Sebastian C.A., Friedlander, Alan M., Gough, Charlotte L.A., Green, Alison L., Mouillot, David, Polunin, Nicholas V.C., Stuart-smith, Rick D., Wantiez, Laurent, Williams, Ivor D., Wilson, Shaun K., and Connolly, Sean R. (2023) Sustainable reference points for multispecies coral reef fisheries. Nature Communications, 14 (1). 5368.

Morais, Renato A., Smallhorn-West, Patrick, Connolly, Sean R., Ngaluafe, Poasi Fale, Malimali, Siola’a, Halafihi, Tu’ikolongahau, and Bellwood, David R. (2023) Sustained productivity and the persistence of coral reef fisheries. Nature Sustainability, 6. 1240. pp. 1199-1209.

Dawson, Amanda L., Santana, Marina F.M., Nelis, Joost L.D., and Motti, Cherie A. (2023) Taking control of microplastics data: A comparison of control and blank data correction methods. Journal of Hazardous Materials, 443 (Part A). 130218.

Pattiselanno, Freddy, Ziembicki, Mark, Nasi, Robert, and Krockenberger, Andrew (2023) Target, tool, tenure and timing: the four T's limiting the impact of traditional hunting in Indonesian Papua. Frontiers in Conservation Science, 4. 1266321.

Quimbayo, Juan P., Nunes, Lucas T., Silva, Fernanda C., Anderson, Antônio B., Barneche, Diego R., Canterle, Angela M., Cord, Isadora, Dalben, Andrea, Ferrari, Débora S., Fontoura, Luisa, Fiuza, Thiago M.J., Liedke, Ana M.R., Longo, Guilherme O., Morais, Renato A., Siqueira, Alexandre C., and Floeter, Sergio R. (2023) TimeFISH: Long-term assessment of reef fish assemblages in a transition zone in the Southwestern Atlantic. Ecology, 104 (3). e3966.

Streit, Robert P., and Bellwood, David R. (2023) To harness traits for ecology, let's abandon 'functionality'. Trends in Ecology and Evolution, 38 (5). pp. 402-411.

Arbon, P.M., Andrade Martinez, M. Andrade, Jerry, D.R., and Condon, K. (2023) Towards a ‘systems’ approach for viral challenge experiments in shrimp: Reporting guidelines for publication. Reviews in Aquaculture, 16 (2). pp. 923-941.

Roura, Álvaro, Doyle, Stephen R., Castro-Bugallo, Alexandra, Hall, Nathan E., Gonzalez, Ángel F., and Strugnell, Jan M. (2023) Trophic ecology of Octopus vulgaris paralarvae along the Iberian Canary current eastern boundary upwelling system. Scientific Reports, 13. 8744.

Reid, Amanda, Sato, Noriyosi, Jolly, Jeffrey, and Strugnell, Jan (2023) Two new pygmy squids, Idiosepius kijimuna n.sp. and Kodama jujutsu n.gen., n.sp. (Cephalopoda: Idiosepiidae) from the Ryukyu Islands, Japan. Marine Biology, 170 (12). 167.

Álava-Jurado, Juan Manuel, Kingsford, Michael J., Brandt, Margarita, and Dorfman, Eric (2023) Underwater kleptoparasitism on a human diver by a Galapagos flightless cormorant Nannopterum harrisi. Marine Ornithology, 51 (1). pp. 41-42.

Bradley, Michael, Sheaves, Marcus, and Waltham, Nathan J. (2023) Urban-industrial seascapes can be abundant and dynamic fish habitat. Frontiers in Marine Science, 9. 1034039.

Appert, Collette, Udyawer, Vinay, Simpfendorfer, Colin A., Heupel, Michelle R., Scott, Molly, Currey-Randall, Leanne M., Harborne, Alastair R., Jaine, Fabrice, and Chin, Andrew (2023) Use, misuse, and ambiguity of indices of residence in acoustic telemetry studies. Marine Ecology Progress Series, 714. pp. 27-44.

Sutherland, Ira J., Van Vianen, Josh, Rowland, Dominic, Palomo, Ignacio, Pascual, Unai, Mathys, Amanda, Narulita, Sari, and Sunderland, Terry (2023) Use, value, and desire: ecosystem services under agricultural intensification in a changing landscape in West Kalimantan (Indonesia). Regional Environmental Change, 23. 148.

Cybulski, Jonathan, Doherty, John M., LaRoche, Carly, Gutkowski, Kelly Donovan, Luo, Zizhan, Malloy, Elizabeth J., MacMillan, Laurel, Raymundo, Laurie, and Kim, Kiho (2023) Using coral holes to explore the historical ecology of Guam's coral reefs. Coral Reefs, 42. pp. 1411-1417.

Hua, Qiaz Q.H., Thomson, Vicki A., Strugnell, Jan M., Martino, Jasmin C., Gillanders, Bronwyn M., and Doubleday, Zoe A. (2023) Using genomics and morphometrics to monitor data-poor and commercially exploited octopod populations. Marine Biology, 170 (10). 119.

Pacey, Kai I., Caballes, Ciemon F., and Pratchett, Morgan S. (2023) Using size-weight relationships to estimate biomass of heavily targeted aquarium corals by Australia’s coral harvest fisheries. Scientific Reports, 13. 1448.

O'Brien, Paul A., Tan, Shangjin, Frade, Pedro R., Robbins, Steven J., Engelberts, J. Pamela, Bell, Sara C., Vanwonterghem, Inka, Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2023) Validation of key sponge symbiont pathways using genome-centric metatranscriptomics. Environmental Microbiology, 25 (12). pp. 3207-3224.

Motson, Katie, Hutson, Kate S., and Hoey, Andrew S. (2023) Variation in the parasite communities of three co-occurring herbivorous coral reef fishes. Journal of Fish Biology, 102 (4). pp. 757-772.

Hirschfeld, Maximilian, Barnett, Adam, Sheaves, Marcus, and Dudgeon, Christine (2023) What Darwin could not see: island formation and historical sea levels shape genetic divergence and island biogeography in a coastal marine species. Heredity, 131. pp. 189-200.

Simpfendorfer, Colin A., Heithaus, Michael R., Heupel, Michelle R., MacNeil, M. Aaron, Meekan, Mark, Harvey, Euan, Sherman, C. Samantha, Currey-Randall, Leanne M., Goetze, Jordan S., Kiszka, Jeremy J., Rees, Matthew J., Speed, Conrad W., Udyawer, Vinay, Bond, Mark E., Flowers, Kathryn I., Clementi, Gina M., Valentin-Albanese, Jasmine, Adam, M. Shiham, Ali, Khadeeja, Asher, Jacob, Aylagas, Eva, Beaufort, Océane, Benjamin, Cecilie, Bernard, Anthony T.F., Berumen, Michael L., Bierwagen, Stacy, Birrell, Chico, Bonnema, Erika, Bown, Rosalind M.K., Brooks, Edward J., Brown, J. Jed, Buddo, Dayne, Burke, Patrick J., Cáceres, Camila, Cambra, Marta, Cardeñosa, Diego, Carrier, Jeffrey C., Casareto, Sara, Caselle, Jennifer E., Charloo, Venkatesh, Cinner, Joshua E., Claverie, Thomas, Clua, Eric E.G., Cochran, Jesse E.M., Cook, Neil, Cramp, Jessica E., D’Alberto, Brooke M., de Graaf, Martin, Dornhege, Mareike C., Espinoza, Mario, Estep, Andy, Fanovich, Lanya, Farabaugh, Naomi F., Fernando, Daniel, Ferreira, Carlos E.L., Fields, Candace Y.A., Flam, Anna L., Floros, Camilla, Fourqurean, Virginia, Gajdzik, Laura, Barcia, Laura García, Garla, Ricardo, Gastrich, Kirk, George, Lachlan, Giarrizzo, Tommaso, Graham, Rory, Guttridge, Tristan L., Hagan, Valerie, Hardenstine, Royale S., Heck, Stephen M., Henderson, Aaron C., Heithaus, Patricia, Hertler, Heidi, Padilla, Mauricio Hoyos, Hueter, Robert E., Jabado, Rima W., Joyeux, Jean Christophe, Jaiteh, Vanessa, Johnson, Mohini, Jupiter, Stacy D., Kaimuddin, Muslimin, Kasana, Devanshi, Kelley, Megan, Kessel, Steven T., Kiilu, Benedict, Kirata, Taratau, Kuguru, Baraka, Kyne, Fabian, Langlois, Tim, Lara, Frida, Lawe, Jaedon, Lédée, Elodie J.I., Lindfield, Steve, Luna-Acosta, Andrea, Maggs, Jade Q., Manjaji-Matsumoto, B. Mabel, Marshall, Andrea, Martin, Lucy, Mateos-Molina, Daniel, Matich, Philip, McCombs, Erin, McIvor, Ashlie, Mclean, Dianne, Meggs, Llewelyn, Moore, Stephen, Mukherji, Sushmita, Murray, Ryan, Newman, Stephen J., Nogués, Josep, Obota, Clay, Ochavillo, Domingo, O'shea, Owen, Osuka, Kennedy E., Papastamatiou, Yannis P., Perera, Nishan, Peterson, Bradley, Pimentel, Caio R., Pina-Amargós, Fabián, Pinheiro, Hudson T., Ponzo, Alessandro, Prasetyo, Andhika, Quamar, L. M. Sjamsul, Quinlan, Jessica R., Reis-Filho, José Amorim, Ruiz, Hector, Ruiz-Abierno, Alexei, Sala, Enric, Salinas-de-León, Pelayo, Samoilys, Melita A., Sample, William R., Schärer-Umpierre, Michelle, Schlaff, Audrey M., Schmid, Kurt, Schoen, Sara N., Simpson, Nikola, Smith, Adam N.H., Spaet, Julia L.Y., Sparks, Lauren, Stoffers, Twan, Tanna, Akshay, Torres, Rubén, Travers, Michael J., van Zinnicq Bergmann, Maurits, Vigliola, Laurent, Ward, Juney, Warren, Joseph D., Watts, Alexandra M., Wen, Colin K., Whitman, Elizabeth R., Wirsing, Aaron J., Wothke, Aljoscha, Zarza-González, Esteban, and Chapman, Demian D. (2023) Widespread diversity deficits of coral reef sharks and rays. Science, 380 (6650). pp. 1155-1160.

Chen, Jun Yu, Zeng, Chaoshu, and Cobcroft, Jennifer M. (2023) Year-Round Spawning, Filial Cannibalism, and Embryonic and Larval Development of the Coral Reef Fish Orchid Dottyback, Pseudochromis fridmani. Fishes, 8 (9). 451.

Li, Jie, Zou, Yiyang, Li, Qiqi, Zhang, Jian, Bourne, David G., Lyu, Yuanjiao, Liu, Cong, and Zhang, Si (2023) A coral-associated actinobacterium mitigates coral bleaching under heat stress. Environmental Microbiome, 18 (1). 83.

Nagelkerken, Ivan, Allan, Bridie J.M., Booth, David J., Donelson, Jennifer M., Edgar, Graham J., Ravasi, Timothy, Rummer, Jodie L., Vergés, Adriana, and Mellin, Camille (2023) The effects of climate change on the ecology of fishes. PLOS Climate, 2 (8). e0000258.

Bertola, Lorenzo V., Hoskin, Conrad J., Jones, David B., Zenger, Kyall R., McKnight, Donald T., and Higgie, Megan (2023) The first linkage map for Australo-Papuan Treefrogs (family: Pelodryadidae) reveals the sex-determination system of the Green-eyed Treefrog (Litoria serrata). Heredity, 131. pp. 263-272.

Galaz García, Carmen, Bagstad, Kenneth J., Brun, Julien, Chaplin-Kramer, Rebecca, Dhu, Trevor, Murray, Nicholas J., Nolan, Connor J., Ricketts, Taylor H., Sosik, Heidi M., Sousa, Daniel, Willard, Geoff, and Halpern, Benjamin S. (2023) The future of ecosystem assessments is automation, collaboration, and artificial intelligence. Environmental Research Letters, 18 (1). 011003.

Lutzenkirchen, Lucas L., Duce, Stephanie J., and Bellwood, David R. (2023) The global biogeography of reef morphology. Global Ecology and Biogeography, 32 (8). pp. 1353-1364.

Shinn, Andrew P., Avenant-Oldewage, Annemarie, Bondad-Reantaso, Melba G., Cruz-Laufer, Armando J., García-Vásquez, Adriana, Hernández-Orts, Jesús S., Kuchta, Roman, Longshaw, Matt, Metselaar, Matthijs, Pariselle, Antoine, Pérez-Ponce de León, Gerardo, Pradhan, Pravata Kumar, Rubio-Godoy, Miguel, Sood, Neeraj, Vanhove, Maarten P.M., and Deveney, Marty R. (2023) A global review of problematic and pathogenic parasites of farmed tilapia. Reviews in Aquaculture, 15 (Suppl.1). pp. 92-153.

Suggett, David J., Edwards, Melissa, Cotton, Deborah, Hein, Margaux, and Camp, Emma F. (2023) An integrative framework for sustainable coral reef restoration. One Earth, 6 (6). pp. 666-681.

Cumming, Graeme S. (2023) A mechanistic framework for social-ecological mismatches. National Science Review, 10 (7). nwac130.

Terrell, Alyx P., Marangon, Emma, Webster, Nicole S., Cooke, Ira, and Quigley, Kate M. (2023) The promotion of stress tolerant Symbiodiniaceae dominance in juveniles of two coral species under simulated future conditions of ocean warming and acidification. Frontiers in Ecology and Evolution, 11. 1113357.

Massault, Cecile, Jeffrey, Cara, Jones, David B., Barnard, Roger, Strugnell, Jan M., Zenger, Kyall R., and Jerry, Dean R. (2022) Non-invasive DNA collection for parentage analysis for bivalves: A case study from the silver-lipped pearl oyster (Pinctada maxima). Aquaculture, 552. 738036.

Candebat, Caroline Lourdes, Stephens, Frances, Booth, Mark A., Fernando, Fernando, Lopata, Andreas, and Pirozzi, Igor (2022) Adequate levels of dietary sulphur amino acids impart improved liver and gut health in juvenile yellowtail kingfish (Seriola lalandi). British Journal of Nutrition, 129. pp. 1289-1312.

Nankervis, Leo, Cobcroft, Jennifer M., Nguyen, Nguyen V., and Rimmer, Michael A. (2022) Advances in practical feed formulation and adoption for hybrid grouper (Epinephelus fuscoguttatus ♀ × E. lanceolatus ♂) aquaculture. Reviews in Aquaculture, 14 (1). pp. 288-307.

Kumanan, Karthiga, von Ammon, Ulla, Fidler, Andrew, Symonds, Jane E., Walker, Seumas P., Carson, Jeremy, and Hutson, Kate S. (2022) Advantages of selective medium for surveillance of Tenacibaculum species in marine fish aquaculture. Aquaculture, 558. 738365.

Arjunwadkar, Chaitanya, Tebbett, Sterling B., Bellwood, David, Bourne, David G., and Smith, Hillary A. (2022) Algal turf structure and composition vary with particulate loads on coral reefs. Marine Pollution Bulletin, 181. 113903.

Hemingson, Christopher R., Mihalitsis, Michalis, and Bellwood, David R. (2022) Are fish communities on coral reefs becoming less colourful? Global Change Biology, 28 (10). pp. 3321-3332.

Wright, Jeffrey T., Kennedy, Elysha J., de Nys, Rocky, and Tatsumi, Masayuki (2022) Asexual propagation of Asparagopsis armata gametophytes: fragmentation, regrowth and attachment mechanisms for sea-based cultivation. Journal of Applied Phycology, 34. pp. 2135-2144.

Corkeron, Peter, Roman, Joe, Kershaw, Francine, Leslie, Matthew S., Kraus, Scott D., and Sutaria, Dipani (2022) Balaenoptera ricei is also the Gulf of Mexico whale. Marine Mammal Science, 38 (2). pp. 847-849.

Glasson, Christopher R.K., Kinley, Robert D., de Nys, Rocky, King, Nick, Adams, Serean L., Packer, Michael A., Svenson, Johan, Eason, Charles T., and Magnusson, Marie (2022) Benefits and risks of including the bromoform containing seaweed Asparagopsis in feed for the reduction of methane production from ruminants. Algal Research, 64. 102673.

Tebbett, Sterling B., Streit, Robert P., Morais, Juliano, Schlaefer, Jodie A., Swan, Sam, and Bellwood, David R. (2022) Benthic cyanobacterial mat formation during severe coral bleaching at Lizard Island: The mediating role of water currents. Marine Environmental Research, 181. 105752.

Morse, Peter, and Huffard, Christine (2022) Chemotactile social recognition in the blue-ringed octopus, Hapalochlaena maculosa. Marine Biology, 169 (8). 99.

Hoel, Kristin, Chin, Andrew, and Lau, Jacqueline (2022) Clashing conservation values: The social complexities of shark depredation. Biological Conservation, 272. 109658.

Narvaez, Pauline, Morais, Renato A., Vaughan, David B., Grutter, Alexandra S., and Hutson, Kate S. (2022) Cleaner fish are potential super-spreaders. Journal of Experimental Biology, 225. 15.

Saleh, Alzayat, Sheaves, Marcus, and Rahimi Azghadi, Mostafa (2022) Computer vision and deep learning for fish classification in underwater habitats: A survey. Fish and Fisheries, 23 (4). pp. 977-999.

Chin, Andrew, Molloy, Fergus John, Cameron, Darren, Day, Jon C., Cramp, Jessica, Gerhardt, Karin Leeann, Heupel, Michelle R., Read, Mark, and Simpfendorfer, Colin A. (2022) Conceptual frameworks and key questions for assessing the contribution of marine protected areas to shark and ray conservation. Conservation Biology, 37 (1). e13917.

Galbraith, Gemma F., Cresswell, Benjamin J., McCormick, Mark, Bridge, Thomas C., and Jones, Geoffrey P. (2022) Contrasting hydrodynamic regimes of submerged pinnacle and emergent coral reefs. PLoS ONE, 17 (8). e0273092.

Razak, Tries B., Bostrom-Einarsson, Lisa, Alisa, Cut Aja Gita, Vida, Rindah Talitha, and Lamont, Timothy A.C. (2022) Coral reef restoration in Indonesia: A review of policies and projects. Marine Policy, 137. 104940.

McLeod, Ian M., Hein, Margaux Y., Babcock, Russell, Bay, Line, Bourne, David G., Cook, Nathan, Doropoulos, Christopher, Gibbs, Mark, Harrison, Peter, Lockie, Stewart, van Oppen, Madeleine J.H., Mattocks, Neil, Page, Cathie A., Randall, Carly J., Smith, Adam, Smith, Hillary A., Suggett, David J., Taylor, Bruce, Vella, Karen J., Wachenfeld, David, and Boström-Einarsson, Lisa (2022) Coral restoration and adaptation in Australia: The first five years. PLoS ONE, 17 (11). e0273325.

Li, Jie, Zou, Yiyang, Yang, Jian, Li, Qiqi, Bourne, David G., Sweet, Michael, Liu, Cong, Guo, Anjie, and Zhang, Si (2022) Cultured Bacteria Provide Insight into the Functional Potential of the Coral-Associated Microbiome. mSystems, 7 (4). e00327-22.

Kuek, Felicity, Motti, Cherie, Zhang, Jia, Cooke, Ira R., Todd, Jonathan D., Miller, David J., Bourne, David G., and Raina, Jean-Baptiste (2022) DMSP production by coral-associated bacteria. Frontiers in Marine Science, 9. 869574.

Budd, Alyssa M., Guppy, Jarrod L., Thepot, Valentin, Domingos, Jose A., and Jerry, Dean R. (2022) Delayed effect of low rearing temperature on gonadal DNA methylation in juvenile barramundi (Lates calcarifer). Aquaculture, 560. 738541.

Pell, Taleatha, Li, Joan Y.Q., and Joyce, Karen E. (2022) Demystifying the Differences between Structure-from-Motion Software Packages for Pre-Processing Drone Data. Drones, 6 (1). 24.

Hill, Erin, Linacre, Adrian, Toop, Simon, Murphy, Nicholas, and Strugnell, Jan M. (2022) Development of an STR panel for a non-native population of an endangered species. Molecular Biology Reports, 49 (1). pp. 839-845.

Wheeler, Carolyn R., Kneebone, Jeff, Heinrich, Dennis, Strugnell, Jan M., Mandelman, John W., and Rummer, Jodie L. (2022) Diel Rhythm and Thermal Independence of Metabolic Rate in a Benthic Shark. Journal of Biological Rhythms, 37 (5). pp. 484-497.

Baje, Leontine, Chin, Andrew, White, William T., and Simpfendorfer, Colin A. (2022) Dietary overlap of carcharhinid sharks in the Gulf of Papua. Marine and Freshwater Research, 73 (5). pp. 605-614.

Fernando, Fernando, Candebat, Caroline L., Strugnell, Jan M., Andreakis, Nikolaos, and Nankervis, Leo (2022) Dietary supplementation of astaxanthin modulates skin color and liver antioxidant status of giant grouper (Epinephelus lanceolatus). Aquaculture Reports, 26. 101266.

Foster, Charles S.P., Van Dyke, James U., Thompson, Michael B., Smith, Nicholas M.A., Simpfendorfer, Colin A., Murphy, Christopher R., and Whittington, Camilla M. (2022) Different Genes are Recruited During Convergent Evolution of Pregnancy and the Placenta. Molecular Biology and Evolution, 39 (4). msac077.

Li, Joan Y.Q., Nankervis, Leo, and Dawson, Amanda L. (2022) Digesting the Indigestible: Microplastic Extraction from Prawn Digestive Tracts. Frontiers in Environmental Chemistry, 3. 903314.

Villacorta Rath, Cecilia, Green, Bridget S., Gardner, Caleb, Murphy, Nick P., Souza, Carla A., and Strugnell, Jan M. (2022) Disentangling genetic from environmental effects on phenotypic variability of Southern rock lobster (Jasus edwardsii) postlarvae. Ecology and Evolution, 12 (11). e9519.

Andrzejaczek, Samantha, Lucas, Tim. C.D., Goodman, Maurice C., Hussey, Nigel E., Armstrong, Amelia J., Carlisle, Aaron, Coffey, Daniel M., Gleiss, Adrian C., Huveneers, Charlie, Jacoby, David M.P., Meekan, Mark G., Mourier, Johann, Peel, Lauren R., dos Santos Abrantes, Katya, Afonso, Andre S., Ajemian, Matthew J., Anderson, Brooke N., Anderson, Scot D., Araujo, Gonzalo, Armstrong, Asia O., Bach, Pascal, Barnett, Adam, Bennett, Mike B., Bezerra, Natalia A., Bonfil, Ramon, Boustany, Andre M., Bowlby, Heather D., Branco, Ilka, Braun, Camrin D., Brooks, Edward J., Brown, Judith, Burke, Patrick J., Butcher, Paul, Castleton, Michael, Chapple, Taylor K., Chateau, Olivier, Clarke, Maurice, Coelho, Rui, Cortes, Enric, Couturier, Lydie I. E., Cowley, Paul D., Croll, Donald A., Cuevas, Juan M., Curtis, Tobey H., Dagorn, Laurent, Dale, Jonathan J., Daly, Ryan, Dewar, Heidi, Doherty, Philip D., Domingo, Andres, Dove, Alistair D. M., Drew, Michael, Dudgeon, Christine L., Duffy, Clinton A. J., Elliott, Riley G., Ellis, Jim R., Erdmann, Mark, Farrugia, Thomas J., Ferreira, Luciana C., Ferretti, Francesco, Filmalter, John D., Finucci, Brittany, Fischer, Chris, Fitzpatrick, Richard, Forget, Fabien, Forsberg, Kerstin, Francis, Malcolm P., Franks, Bryan R., Gallagher, Austin J., Galvan-Magana, Felipe, Garcia, Mirta L., Gaston, Troy F., Gillanders, Bronwyn M., Gollock, Matthew J., Green, Jonathan R., Green, Sofia, Griffiths, Christopher A., Hammerschlag, Neil, Hasan, Abdi, Hawkes, Lucy A., Hazin, Fabio, Heard, Matthew, Hearn, Alex, Hedges, Kevin J., Henderson, Suzanne M., Holdsworth, John, Holland, Kim N., Howey, Lucy A., Hueter, Robert E., Humphries, Nicholas E., Hutchinson, Melanie, Jaine, Fabrice R. A., Jorgensen, Salvador J., Kanive, Paul E., Labaja, Jessica, Lana, Fernanda O., Lassauce, Hugo, Lipscombe, Rebecca S., Llewellyn, Fiona, Macena, Bruno C. L., Mambrasar, Ronald, McAllister, Jaime D., Phillips, Sophy R. McCully, McGregor, Frazer, McMillan, Matthew N., McNaughton, Lianne M., Mendonca, Sibele A., Meyer, Carl G., Meyers, Megan, Mohan, John A., Montgomery, John C., Mucientes, Gonzalo, Musyl, Michael K., Nasby-Lucas, Nicole, Natanson, Lisa J., O'Sullivan, John B., Oliveira, Paulo, Papastamtiou, Yannis P., Patterson, Toby A., Pierce, Simon J., Queiroz, Nuno, Radford, Craig A., Richardson, Andy J., Richardson, Anthony J., Righton, David, Rohner, Christoph A., Royer, Mark A., Saunders, Ryan A., Schaber, Matthias, Schallert, Robert J., Scholl, Michael C., Seitz, Andrew C., Semmens, Jayson M., Setyawan, Edy, Shea, Brendan D., Shidqi, Rafid A., Shillinger, George L., Shipley, Oliver N., Shivji, Mahmood S., Sianipar, Abraham B., Silva, Joana F., Sims, David W., Skomal, Gregory B., Sousa, Lara L., Southall, Emily J., Spaet, Julia L. Y., Stehfest, Kilian M., Stevens, Guy, Stewart, Joshua D., Sulikowski, James A., Syakurachman, Ismail, Thorrold, Simon R., Thums, Michele, Tickler, David, Tolloti, Mariana T., Townsend, Kathy A., Travassos, Paulo, Tyminski, John P., Vaudo, Jeremy J., Veras, Drausio, Wantiez, Laurent, Weber, Sam B., Wells, R. J. David, Weng, Kevin C., Wetherbee, Bradley M., Williamson, Jane E., Witt, Matthew J., Wright, Serena, Zilliacus, Kelly, Block, Barbara A., and Curnick, David J. (2022) Diving into the vertical dimension of elasmobranch movement ecology. Science Advances, 8 (33).

Ng, Isabelle, Bellwood, David R., and Siqueira, Alexandre C. (2022) Do currents shape global patterns of hybrid richness in reef fishes? Global Ecology and Biogeography, 31 (12). pp. 2524-2540.

Borland, Hayden P., Gilby, Ben L., Henderson, Christopher J., Connolly, Rod M., Gorissen, Bob, Ortodossi, Nicholas L., Rummell, Ashley J., Pittman, Simon J., Sheaves, Marcus, and Olds, Andrew D. (2022) Dredging fundamentally reshapes the ecological significance of 3D terrain features for fish in estuarine seascapes. Landscape Ecology, 37. pp. 1385-1400.

Borland, Hayden P., Gilby, Ben L., Henderson, Christopher J., Connolly, Rod M., Gorissen, Bob, Ortodossi, Nicholas L., Rummell, Ashley J., Pittman, Simon J., Sheaves, Marcus, and Olds, Andrew D. (2022) Dredging transforms the seafloor and enhances functional diversity in urban seascapes. Science of the Total Environment, 831. 154811.

Ye, Haihui, Zeng, Chaoshu, Tsutsui, Naoaki, and Dircksen, Heinrich (2022) Editorial: Crustacean reproductive physiology and its applications. Frontiers in Physiology, 13. 1018481.

Penglase, Sam, Ackery, Thomas, Kitchen, Barry, Flavel, Matthew, and Condon, Kelly (2022) The Effects of a Natural Polyphenol Extract from Sugarcane (Saccharum officinarum) on the Growth, Survival, and Feed Conversion Efficiency of Juvenile Black Tiger Shrimp (Penaeus monodon). Applied Sciences, 12 (16). 8090.

González-Murcia, Saúl, Coppock, Amy G., Ekins, Merrick, Battershill, Christopher N., and Jones, Geoffrey P. (2022) Effects of exposure, depth and aspect on sponge communities on a coral reef. Marine Ecology Progress Series, 685. pp. 111-126.

Noonan, Sam H.C., DiPerna, Stephanie, Hoogenboom, Mia O., and Fabricius, Katharina E. (2022) Effects of variable daily light integrals and elevated CO2 on the adult and juvenile performance of two Acropora corals. Marine Biology, 169. 10.

von Ammon, Ulla, Averink, Tessa, Kumanan, Karthiga, Brosnahan, Cara L., Pochon, Xavier, Hutson, Kate S., and Symonds, Jane E. (2022) An Efficient Tetraplex Surveillance Tool for Salmonid Pathogens. Frontiers In Microbiology, 13. 885585.

Gurdek-Bas, Rodrigo, Benthuysen, Jessica A., Harrison, Hugo B., Zenger, Kyall R., and van Herwerden, Lynne (2022) The El Niño Southern Oscillation drives multidirectional inter-reef larval connectivity in the Great Barrier Reef. Scientific Reports, 12 (1). 21290.

Cooke, Steven J., Hultine, Kevin R., Rummer, Jodie L., Fangue, Nann A., Seebacher, Frank, Eliason, Erika J., Macmillan, Heath A., Fuller, Andrea, and Franklin, Craig E. (2022) Elevating the impact of conservation physiology by building a community devoted to excellence, transparency, ethics, integrity and mutual respect. Conservation Physiology, 10 (1). coac015.

Jorgensen, Salvador J., Micheli, Fiorenza, White, Timothy D., Van Houtan, Kyle S., Alfaro-Shigueto, Joanna, Andrzejaczek, Samantha, Arnoldi, Natalie S., Baum, Julia K., Block, Barbara, Britten, Gregory L., Butner, Cheryl, Caballero, Susana, Cardenosa, Diego, Chapple, Taylor K., Clarke, Shelley, Cortés, Enric, Dulvy, Nicholas K., Fowler, Sarah, Gallagher, Austin J., Gilman, Eric, Godley, Brendan J., Graham, Rachel T., Hammerschlag, Neil, Harry, Alastair, Heithaus, Michael R., Hutchinson, Melanie, Huveneers, Charlie, Lowe, Chris G., Lucifora, Luis O., MacKeracher, Tracy, Mangel, Jeffrey C., Barbosa Martins, Ana Paula, McCauley, Douglas J., McClenachan, Loren, Mull, Christopher, Natanson, Lisa J., Pauly, Daniel, Pazmiño, Diana A., Pistevos, Jennifer C.A., Queiroz, Nuno, Roff, George, Shea, Brendan D., Simpfendorfer, Colin A., Sims, David W., Ward-Paige, Christine, Worm, Boris, and Ferretti, Francesco (2022) Emergent research and priorities for shark and ray conservation. Endangered Species Research, 47. pp. 171-203.

Strugnell, Jan M., Mcgregor, Helen, Wilson, Nerida G., Meredith, Karina T., Chown, Steven L., Lau, Sally C.Y., Robinson, Sharon A., and Saunders, Krystyna M. (2022) Emerging biological archives can reveal ecological and climatic change in Antarctica. Global Change Biology, 28 (22). pp. 6483-6508.

Shu, Jacelyn J., Heuer, Rachael M., Hannan, Kelly D., Stieglitz, John D., Benetti, Daniel D., Rummer, Jodie L., Grosell, Martin, and Brauner, Colin J. (2022) Enhanced oxygen unloading in two marine percomorph teleosts. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 264. 111101.

Mattone, Carlo, Bradley, Michael, Barnett, Adam, Konovalov, Dmitry A., and Sheaves, Marcus (2022) Environmental conditions constrain nursery habitat value in Australian sub-tropical estuaries. Marine Environmental Research, 175. 105568.

Budd, Alyssa M., Robins, Julie B., Whybird, Olivia, and Jerry, Dean R. (2022) Epigenetics underpins phenotypic plasticity of protandrous sex change in fish. Ecology and Evolution, 12 (3). e8730.

Trujillo, José E., Bouyoucos, Ian, Rayment, William J., Domenici, Paolo, Planes, Serge, Rummer, Jodie L., and Allan, Bridie J.M. (2022) Escape response kinematics in two species of tropical shark: short escape latencies and high turning performance. Journal of Experimental Biology, 225 (22). jeb243973.

Xu, Tian, and Zeng, Chaoshu (2022) Establishing larval feeding regimens for the decorator crab Camposcia retusa: effects of live prey types and density on larval survival and development. Aquaculture Research, 53 (7). pp. 2772-2784.

Zhang, Jia, Richards, Zoe T., Adam, Arne A.S., Chan, Cheong Xin, Shinzato, Chuya, Gilmour, James, Thomas, Luke, Strugnell, Jan M., Miller, David J., and Cooke, Ira (2022) Evolutionary Responses of a Reef-building Coral to Climate Change at the End of the Last Glacial Maximum. Molecular Biology and Evolution, 39 (10). msac201.

Free, Christopher M., Cabral, Reniel B., Froehlich, Halley E., Battista, Willow, Ojea, Elena, O’Reilly, Erin, Palardy, James E., García Molinos, Jorge, Siegel, Katherine J., Arnason, Ragnar, Juinio-Meñez, Marie Antonette, Fabricius, Katharina, Turley, Carol, and Gaines, Steven D. (2022) Expanding ocean food production under climate change. Nature, 605. pp. 490-496.

Nielsen, J.J.V., Matthews, G., Frith, K.R., Harrison, H.B., Marzonie, M.R., Slaughter, K.L., Suggett, D.J., and Bay, L.K. (2022) Experimental considerations of acute heat stress assays to quantify coral thermal tolerance. Scientific Reports, 12 (1). 16831.

Westaway, Jacob A.F., Huerlimann, Roger, Kandasamy, Yogavijayan, Miller, Catherine M., Norton, Robert, Watson, David, Infante-Villamil, Sandra, and Rudd, Donna (2022) Exploring the long-term colonisation and persistence of probiotic-prophylaxis species on the gut microbiome of preterm infants: a pilot study. European Journal of Pediatrics, 181 (9). pp. 3389-3400.

Siqueira Correa, Alexandre, Kiessling, Wolfgang, and Bellwood, David (2022) Fast-growing species shape the evolution of reef corals. Nature Communications, 13. 2426.

Utthamapandian, Udhayakumar, Sutaria, Dipani, and Saravanakumar, Ayyappan (2022) First Photographic Record of Smooth-Coated Otters (Lutra Perspicillata Geoffroy 1826) in Vellar Estuary, Northeast Coast of Tamil Nadu, India. International Union for Conservation of Nature and Natural Resources. Species Survival Commission - Otter Specialist Group Bulletin, 39 (1). pp. 16-21.

Muruga, Pooventhran, Bellwood, David R., and Mihalitsis, Michalis (2022) Forensic odontology: Assessing bite wounds to determine the role of teeth in piscivorous fishes. Integrative Organismal Biology, 4 (1). obac011.

Panchal, Sunil K., Ghattamaneni, Naga K.R., Magnusson, Marie, Cole, Andrew, Roberts, David, Neveux, Nicolas, Brown, Lindsay A., and Paul, Nicholas (2022) Freshwater Macroalgae, Oedogonium, Grown in Wastewater Reduce Diet-Induced Metabolic Syndrome in Rats. International Journal of Molecular Sciences, 23 (22). 13811.

Morrissey, Scott J., Jerry, Dean R., and Kingsford, Michael J. (2022) Genetic Detection and a Method to Study the Ecology of Deadly Cubozoan Jellyfish. Diversity, 14 (12). 1139.

Hill, Erin, Murphy, Nicholas, Toop, Simon, Linacre, Adrian, and Strugnell, Jan M. (2022) Genetic analysis of hog deer (Axis porcinus) in Victoria, Australia, and its applications to invasive species and game management. European Journal of Wildlife Research, 68 (4).

Kosch, Tiffany A., Waddle, Anthony W., Cooper, Caitlin A., Zenger, Kyall R., Garrick, Dorian J., Berger, Lee, and Skerratt, Lee F. (2022) Genetic approaches for increasing fitness in endangered species. Trends in Ecology & Evolution, 37 (4). pp. 332-345.

Hasan, Md Mehedi, Raadsma, Herman W., Thomson, Peter C., Wade, Nicholas M., Jerry, Dean R., and Khatkar, Mehar S. (2022) Genetic parameters of color phenotypes of black tiger shrimp (Penaeus monodon). Frontiers in Genetics, 13. 1002346.

Huerlimann, Roger, Cowley, Jeff A., Wade, Nicholas M., Wang, Yinan, Kasinadhuni, Naga, Chan, Chon Kit Kenneth, Jabbari, Jafar S., Siemering, Kirby, Gordon, Lavinia, Tinning, Matthew, Montenegro, Juan D., Maes, Gregory E., Sellars, Melony J., Coman, Gregory J., McWilliam, Sean, Zenger, Kyall R., Khatkar, Mehar S., Raadsma, Herman W., Donovan, Dallas, Krishna, Gopala, and Jerry, Dean R. (2022) Genome assembly of the Australian black tiger shrimp (Penaeus monodon) reveals a novel fragmented IHHNV EVE sequence. G3: Genes, Genomes, Genetics, 12 (4). jkac034.

Omeka, W.K.M., Liyanage, D.S., Lee, Sukkyoung, Lim, Chaehyeon, Yang, Hyerim, Sandamalika, W.M.Gayashani, Udayantha, H.M.V., Kim, Gaeun, Ganeshalingam, Subothini, Jeong, Taehyug, Oh, Seong-Rip, Won, Seung-Hwan, Koh, Hyoung-Bum, Kim, Mun-Kwan, Jones, David B., Massault, Cecile, Jerry, Dean R., and Lee, Jehee (2022) Genome-wide association study (GWAS) of growth traits in olive flounder (Paralichthys olivaceus). Aquaculture, 555. 738257.

Liyanage, D.S., Lee, Sukkyoung, Yang, Hyerim, Lim, Chaehyeon, Omeka, W.K.M., Sandamalika, W.M. Gayashani, Udayantha, H.M.V., Kim, Gaeun, Ganeshalingam, Subothini, Jeong, Taehyug, Oh, Seong-Rip, Won, Seung-Hwan, Koh, Hyoung-Bum, Kim, Mun-Kwan, Jones, David B., Massault, Cecile, Jerry, Dean R., and Lee, Jehee (2022) Genome-wide association study of VHSV-resistance trait in Paralichthys olivaceus. Fish and Shellfish Immunology, 124. pp. 391-400.

Womersley, Freya C., Humphries, Nicolas E., Queiroz, Nuno, Vedor, Marisa, da Costa, Ivo, Furtado, Miguel, Tyminski, John P., Abrantes, Katya, Araujo, Gonzalo, Bach, Steffen S., Barnett, Adam, Berumen, Michael L., Bessudo Lion, Sandra, Braun, Camrin D., Clingham, Elizabeth, Cochran, Jesse E.M., de la Parra, Rafael, Diamant, Stella, Dove, Alistair D.M., Dudgeon, Christine L., Erdmann, Mark V., Espinoza, Eduardo, Fitzpatrick, Richard, Cano, Jaime González, Green, Jonathan R., Guzman, Hector M., Hardenstine, Royale, Hasan, Abdi, Hazin, Fábio H.B., Hearn, Alex R., Hueter, Robert, Jaidah, Mohammed Y., Labaja, Jessica, Ladino, Felipe, Macena, Bruno C.L., Morris, John J., Norman, Bradley M., Peñaherrera-Palma, Cesar, Pierce, Simon J., Quintero, Lina M., Ramírez-Macías, Dení, Reynolds, Samantha D., Richardson, Anthony J., Robinson, David P., Rohner, Christoph A., Rowat, David R.L., Sheaves, Marcus, Shivji, Mahmood S., Sianipar, Abraham B., Skomal, Gregory B., Soler, German, Syakurachman, Ismail, Thorrold, Simon R., Webb, D. Harry, Wetherbee, Bradley M., White, Timothy D., Clavelle, Tyler, Kroodsma, David A., Thums, Michele, Ferreira, Luciana C., Meekan, Mark G., Arrowsmith, Lucy M., Lester, Emily K., Meyers, Megan M., Peel, Lauren R., Sequeira, Ana M.M., Eguiluz, Victor M., Duarte, Carlos M., and Sims, David W. (2022) Global collision-risk hotspots of marine traffic and the world's largest fish, the whale shark. Proceedings of the National Academy of Sciences of the United States of America, 119 (20). e2117440.

Matley, Jordan K., Klinard, Natalie V., Barbosa Martins, Ana P., Aarestrup, Kim, Aspillaga, Eneko, Cooke, Steven J., Cowley, Paul D., Heupel, Michelle R., Lowe, Christopher G., Lowerre-Barbieri, Susan K., Mitamura, Hiromichi, Moore, Jean Sébastien, Simpfendorfer, Colin A., Stokesbury, Michael J.W., Taylor, Matthew D., Thorstad, Eva B., Vandergoot, Christopher S., and Fisk, Aaron T. (2022) Global trends in aquatic animal tracking with acoustic telemetry. Trends in Ecology & Evolution, 37 (1). pp. 79-94.

Figueiredo, Joana, Thomas, Christopher J., Deleersnijder, Eric, Lambrechts, Jonathan, Baird, Andrew H., Connolly, Sean R., and Hanert, Emmanuel (2022) Global warming decreases connectivity among coral populations. Nature Climate Change, 12 (1). pp. 83-87.

Whitelaw, Brooke L., Jones, David B., Guppy, Jarrod, Morse, Peter, Strugnell, Jan M., Cooke, Ira R., and Zenger, Kyall (2022) High-Density Genetic Linkage Map of the Southern Blue-ringed Octopus (Octopodidae: Hapalochlaena maculosa). Diversity, 14 (12). 1068.

Murray, Nicholas J., Worthington, Thomas A., Bunting, Pete, Duce, Stephanie, Hagger, Valerie, Lovelock, Catherine E., Lucas, Richard, Saunders, Megan I., Sheaves, Marcus, Spalding, Mark, Waltham, Nathan J., and Lyons, Mitchell B. (2022) High-resolution mapping of losses and gains of Earth's tidal wetlands. Science, 376. pp. 744-749.

Sih, Tiffany Lorraine, Williams, Ashley John, Hu, Yi, and Kingsford, Michael John (2022) High-resolution otolith elemental signatures in eteline snappers from valuable deepwater tropical fisheries. Journal of Fish Biology, 100 (6). pp. 1475-1496.

Wada, Naohisa, Hsu, Ming-Tsung, Tandon, Kshitij, Hsiao, Silver Sung-Yun, Chen, Hsing-Ju, Chen, Yu-Hsiang, Chiang, Pei-Wen, Yu, Sheng-Ping, Lu, Chih-Ying, Chiou, Yu-Jing, Tu, Yung-Chi, Tian, Xuejiao, Chen, Bi-Chang, Lee, Der-Chuen, Yamashiro, Hideyuki, Bourne, David G., and Tang, Sen-lin (2022) High-resolution spatial and genomic characterization of coral-associated microbial aggregates in the coral Stylophora pistillata. Science Advances, 8 (27). eabo2431.

Hobbs, Jean-Paul A., Richards, Zoe T., Popovic, Iva, Lei, Chuan, Staeudle, Timo M., Montanari, Stefano R., and Dibattista, Joseph D. (2022) Hybridisation and the evolution of coral reef biodiversity. Coral Reefs, 41. pp. 535-549.

Greco, Laura Susana Lopez, Stumpf, Liane, Timpanaro, Santiago, Cid, Abril Rebagliati, Lamberti, Matias, Battista, Ariadna, LauraTomas, Ana, and Jones, Clive M. (2022) Impact of low-cost diets on maturation of the red claw crayfish Cherax quadricarinatus: An integrative approach during a long-term study. Aquaculture, 561. 738614.

Marangoni, Laura F.B., Davies, Thomas, Smyth, Tim, Rodriguez, Airam, Hamann, Mark, Duarte, Cristian, Pendoley, Kellie, Berge, Jørgen, Maggi, Elena, and Levy, Oren (2022) Impacts of artificial light at night in marine ecosystems—A review. Global Change Biology, 28 (18). pp. 5346-5367.

Genodepa, Jerome, Zeng, Chaoshu, Militz, Thane A., and Southgate, Paul C. (2022) Influence of Food Density on Digestive Enzyme Activities in Newly Hatched Larvae of the Spiny Lobster, Panulirus ornatus. Journal of Shellfish Research, 41 (3). pp. 381-387.

Jensen, Michael P., Eguchi, Tomoharu, Fitzsimmons, Nancy N., Mccarthy, Michael A., Fuentes, Mariana M.P.B., Hamann, Mark, Limpus, Colin J., Bell, Ian P., and Read, Mark A. (2022) Integrating Climate Change and Management Scenarios in Population Models to Guide the Conservation of Marine Turtles. Bulletin of Marine Science, 98 (2). pp. 131-154.

Lau, Sally C.Y., and Strugnell, Jan M. (2022) Is the Southern Ocean ecosystem primed for change or at the cliff edge? Global Change Biology, 28 (15). pp. 4493-4494.

Sun, Youfang, Huang, Lintao, McCook, Laurence J., and Huang, Hui (2022) Joint protection of a crucial reef ecosystem. Science, 377 (6611). p. 1163.

Neil, Rachel C., Cabrera, Maria Gomez, and Uthicke, Sven (2022) Juvenile age and available coral species modulate transition probability from herbivory to corallivory in Acanthaster cf. solaris (Crown-of-Thorns Seastar). Coral Reefs, 41. pp. 843-848.

Cook, Nathan, Smith, Adam, Songcuan, Al, Cassidy, Daniel, Sartori, Greta, and McLeod, Ian (2022) Lessons learned from small-scale coral outplanting intervention at a restoration site on the Great Barrier Reef. Ecological Management and Restoration, 23 (1). pp. 89-93.

Goldsworthy, Nisha C., Srinivasan, Maya, Smallhorn-West, Patrick, Cheah, Lit-Chien, Munday, Philip L., and Jones, Geoffrey P. (2022) Life-history constraints, short adult life span and reproductive strategies in coral reef gobies of the genus Trimma. Journal of Fish Biology, 101 (4). pp. 996-1007.

Nedelec, Sophie L., Radford, Andrew N., Gatenby, Peter, Davidson, Isla Keesje, Velasquez Jimenez, Laura, Travis, Maggie, Chapman, Katherine E., McCloskey, Kieran P., Lamont, Timothy A.C., Illing, Björn, McCormick, Mark I., and Simpson, Stephen D. (2022) Limiting motorboat noise on coral reefs boosts fish reproductive success. Nature Communications, 13 (1). 2822.

Smallhorn-West, Patrick, Cohen, Philippa J., Phillips, Michael, Jupiter, Stacy, Govan, Hugh, and Pressey, Robert L. (2022) Linking small-scale fisheries co-management to UN Sustainable Development Goals. Conservation Biology, 36 (6).

Bradley, Michael, Nagelkerken, Ivan, Baker, Ronald, Travers, Michael, and Sheaves, Marcus (2022) Local Environmental Context Structures Animal-Habitat Associations Across Biogeographic Regions. Ecosystems, 25. pp. 237-251.

Smith, Hillary A., Prenzlau, Tara, Whitman, Taylor, Fulton, Stella E., Borghi, Stefano, Logan, Murray, Heron, Scott F., and Bourne, David G. (2022) Macroalgal canopies provide corals limited protection from bleaching and impede post-bleaching recovery. Journal of Experimental Marine Biology and Ecology, 553. 151762.

Grant, Michael I., Bicknell, Anthony W.J., Htut, Thaung, Maung, Antt, Maung, Thu, Myo, Khin Myo, Rein, Thu, San, Min Khan, White, William T., Ya, Kyaw Zay, and Mizrahi, Meira (2022) Market surveys and social media provide confirmation of the endangered giant freshwater whipray Urogymnus polylepis in Myanmar. Journal of Fish Biology, 101 (1). pp. 302-307.

Guppy, Jarrod L., Marc, Adrien F., and Jerry, Dean R. (2022) Maturation and spawning performance of hormonally-induced precocious female barramundi (Lates calcarifer) and implications of their use in selective breeding. Aquaculture, 552. 737991.

Arbon, P.M., Condon, K., Andrade Martinez, M., and Jerry, D.R. (2022) Molecular detection of six viral pathogens from Australian wild sourced giant black tiger shrimp (Penaeus monodon) broodstock. Aquaculture, 548. 737651.

Trujillo-González, Alejandro, Allas, Joshua, Miller, Terrence L., Becker, Joy A., and Hutson, Kate S. (2022) Myxozoan Diversity Infecting Ornamental Fishes Imported to Australia. Frontiers in Marine Science, 9. 910634.

Tebbett, Sterling B., Bellwood, David R., Johnson, Erin R., and Chase, Tory J. (2022) Occurrence and accumulation of heavy metals in algal turf particulates and sediments on coral reefs. Marine Pollution Bulletin, 184. 114113.

Genodepa, Jerome, Zeng, Chaoshu, Militz, Thane A., and Southgate, Paul C. (2022) Ontogenetic variation in digestive enzyme activities within embryos and newly-hatched larvae of the tropical spiny lobster, Panulirus ornatus. Aquaculture, 548 (Part 1). 737595.

Lowe, J.R., Russ, G.R., Bucol, A.A., Abesamis, R.A., Stockwell, B.L., and Choat, J.H. (2022) Patterns of biogeographic and regional life-history trait variation in four large-bodied tropical wrasses. Marine Biology, 169 (9). 113.

Hamann, Mark, Shimada, Takahiro, Duce, Stephanie, Foster, Alyssa, To, Althea Tsz Ying, and Limpus, Colin (2022) Patterns of nesting behaviour and nesting success for green turtles at Raine Island, Australia. Endangered Species Research, 47. pp. 217-229.

De Wysiecki, Agustin M., Cortes, Federico, Jaureguizar, Andres J., and Barnett, Adam (2022) Potential global distribution of a temperate marine coastal predator: The role of barriers and dispersal corridors on subpopulation connectivity. Limnology and Oceanography, 67 (8). pp. 1805-1819.

Cooper, Madalyn K., Villacorta-Rath, Cecilia, Burrows, Damien, Jerry, Dean R., Carr, Leah, Barnett, Adam, Huveneers, Charlie, and Simpfendorfer, Colin A. (2022) Practical eDNA sampling methods inferred from particle size distribution and comparison of capture techniques for a Critically Endangered elasmobranch. Environmental DNA, 4 (5). pp. 1011-1023.

Jerry, Dean R., Jones, David B., Lillehammer, Marie, Massault, Cecile, Loughnan, Shannon, Cate, Holly S., Harrison, Paul J., Strugnell, Jan M., Zenger, Kyall R., and Robinson, Nicholas A. (2022) Predicted strong genetic gains from the application of genomic selection to improve growth related traits in barramundi (Lates calcarifer). Aquaculture, 549. 737761.

Poulos, Davina E., and McCormick, Mark I. (2022) Prior residency improves the performance of a habitat specialist in a degrading environment. Coral Reefs, 41 (2). pp. 423-433.

Thatcher, Callaway, Hoj, Lone, and Bourne, David G. (2022) Probiotics for coral aquaculture: challenges and considerations. Current Opinion in Biotechnology, 73. pp. 380-386.

Hyde, Ciaran A., Notarbartolo di Sciara, Giuseppe, Sorrentino, Lynn, Boyd, Charlotte, Finucci, Brittany, Fowler, Sarah L., Kyne, Peter M., Leurs, Guido, Simpfendorfer, Colin A., Tetley, Michael J., Womersley, Freya, and Jabado, Rima W. (2022) Putting sharks on the map: A global standard for improving shark area-based conservation. Frontiers in Marine Science, 9. 968853.

Ramírez-Portilla, Catalina, Bieger, Inge M., Belleman, Robert G., Wilke, Thomas, Flot, Jean François, Baird, Andrew H., Harii, Saki, Sinniger, Frederic, and Kaandorp, Jaap A. (2022) Quantitative three-dimensional morphological analysis supports species discrimination in complex-shaped and taxonomically challenging corals. Frontiers in Marine Science, 9. 955582.

Davenport, A.M., D'Anastasi, B.R., and Fitzpatrick, B.M. (2022) Range extension of Czeblukov’s true sea snake Hydrophis czeblukovi (Elapidae:Hydrophiinae) southwest to Exmouth Gulf, Western Australia. Australian Zoologist, 42 (3). pp. 738-751.

Kang, Jingliang, Nagelkerken, Ivan, Rummer, Jodie L., Rodolfo-Metalpa, Riccardo, Munday, Philip L., Ravasi, Timothy, and Schunter, Celia (2022) Rapid evolution fuels transcriptional plasticity to ocean acidification. Global Change Biology, 28 (9). pp. 3007-3022.

Munday, Philip L. (2022) Reanalysis shows there is not an extreme decline effect in fish ocean acidification studies. PLoS Biology, 20 (11). e3001809.

Nankervis, Leo, and Jones, Clive (2022) Recent advances and future directions in practical diet formulation and adoption in tropical Palinurid lobster aquaculture. Reviews in Aquaculture, 14 (4). pp. 1830-1842.

Aquino, Jon Irish, Elliott, Lisa, Zeng, Chaoshu, and Paris, Damien B.B.P. (2022) Recent developments in male fertility evaluation, sperm cryopreservation and artificial fertilisation, and their potential application to decapod crustacean aquaculture. Reviews in Aquaculture, 14 (2). pp. 848-889.

Meyer, Lauren, Barry, Christine, Araujo, Gonzalo, Barnett, Adam, Brunnschweiler, Juerg M., Chin, Andrew, Gallagher, Austin, Healy, Teleah, Kock, Alison, Newsome, David, Ponzo, Alessandro, and Huveneers, Charlie (2022) Redefining provisioning in marine wildlife tourism. Journal of Ecotourism, 21 (3). pp. 210-229.

Waltham, Nathan J., Bradley, Michael, Wilson, Saara, Kane, Kevin, Langham, Odette, and Sheaves, Marcus (2022) Remotely operated vehicle reveals fish orientate to the substrate underneath marina floating pontoons. Estuarine, Coastal and Shelf Science, 280. 108184.

Smith, Hillary A., Brown, Dylan A., Arjunwadkar, Chaitanya V., Fulton, Stella E., Whitman, Taylor, Hermanto, Bambang, Mastroianni, Elissa, Mattocks, Neil, Smith, Adam K., Harrison, Peter L., Boström-Einarsson, Lisa, McLeod, Ian M., and Bourne, David G. (2022) Removal of macroalgae from degraded reefs enhances coral recruitment. Restoration Ecology, 30 (7). e13624.

Sala, Enric, Mayorga, Juan, Bradley, Darcy, Cabral, Reniel B., Atwood, Trisha B., Auber, Arnaud, Cheung, William, Costello, Christopher, Ferretti, Francesco, Friedlander, Alan M., Gaines, Steven D., Garilao, Cristina, Goodell, Whitney, Halpern, Benjamin S., Hinson, Audra, Kaschner, Kristin, Kesner-Reyes, Kathleen, Leprieur, Fabien, Lubchenco, Jane, McGowan, Jennifer, Morgan, Lance E., Mouillot, David, Palacios-Abrantes, Juliano, Possingham, Hugh P., Rechberger, Kristin D., and Worm, Boris (2022) Reply to: A path forward for analysing the impacts of marine protected areas. Nature, 607 (7917). E3-E4.

Genodepa, Jerome, Zeng, Chaoshu, Militz, Thane A., and Southgate, Paul C. (2022) Responses of digestive enzyme profiles to various scenarios of food availability in newly-hatched Stage I phyllosoma larvae of the tropical spiny lobster Panulirus ornatus. Comparative Biochemistry and Physiology-Part B: biochemistry & molecular biology, 261. 110751.

Cantalice, Kleyton M., Alvarado-Ortega, Jesús, Bellwood, David R., and Siqueira, Alexandre C. (2022) Rising from the Ashes: The Biogeographic Origins of Modern Coral Reef Fishes. BioScience, 72 (8). pp. 769-777.

Perez, Michelle A., Limpus, Colin J., Hofmeister, Kate, Shimada, Takahiro, Strydom, Aub, Webster, Emily, and Hamann, Mark (2022) Satellite tagging and flipper tag recoveries reveal migration patterns and foraging distribution of loggerhead sea turtles (Caretta caretta) from eastern Australia. Marine Biology, 169. 80.

Barnett, Adam, Fitzpatrick, Richard, Bradley, Michael, Miller, Ingo, Sheaves, Marcus, Chin, Andrew, Smith, Bethany, Diedrich, Amy, Yick, Jonah, Lubitz, Nicolas, Crook, Kevin, Mattone, Carlo, Bennett, Mike B., Wojtach, Leah, and Abrantes, Katya (2022) Scientific response to a cluster of shark bites. People and Nature, 4 (4). pp. 963-982.

Coppock, Amy G., Kingsford, Michael J., Battershill, Christopher N., and Jones, Geoffrey P. (2022) Significance of fish–sponge interactions in coral reef ecosystems. Coral Reefs, 41. pp. 1285-1308.

Mihalitsis, Michalis, Morais Araujo, Renato A., and Bellwood, David R. (2022) Small predators dominate fish predation in coral reef communities. PLoS Biology, 20 (11). e3001898.

Webster, Emily G., Hamann, Mark, Shimada, Takahiro, Limpus, Colin, and Duce, Stephanie (2022) Space-use patterns of green turtles in industrial coastal foraging habitat: Challenges and opportunities for informing management with a large satellite tracking dataset. Aquatic Conservation: marine and freshwater ecosystems, 32 (6). pp. 1041-1056.

Tebbett, Sterling B., Morais, Juliano, and Bellwood, David R. (2022) Spatial patchiness in change, recruitment, and recovery on coral reefs at Lizard Island following consecutive bleaching events. Marine Environmental Research, 173. 105537.

Webber, K., Srinivasan, M., Coppock, A. G., and Jones, G. P. (2022) Spatial patterns in the cover and composition of macroalgal assemblages on fringing and nearshore coral reefs. Marine and Freshwater Research, 73 (11). pp. 1310-1322.

Crook, Kevin, Sheaves, Marcus, and Barnett, Adam (2022) Species-specific foraging behaviors define the functional roles of sympatric stingrays. Limnology and Oceanography, 67 (1). pp. 219-230.

Glasson, Christopher R.K., Luiten, Cara A., Carnachan, Susan M., Daines, Alison M., Kidgell, Joel T., Hinkley, Simon F.R., Praeger, Christina, Andrade Martinez, Maria, Sargison, Liam, Magnusson, Marie, de Nys, Rocky, and Sims, Ian M. (2022) Structural characterization of ulvans extracted from blade (Ulva ohnoi) and filamentous (Ulva tepida and Ulva prolifera) species of cultivated Ulva. International Journal of Biological Macromolecules, 194. pp. 571-579.

Buddle, Alice L., Van Dyke, James U., Thompson, Michael B., Simpfendorfer, Colin A., Murphy, Christopher R., Day, Margot L., and Whittington, Camilla M. (2022) Structure and permeability of the egg capsule of the placental Australian sharpnose shark, Rhizoprionodon taylori. Journal of Comparative Physiology B: Biochemical Systemic and Environmental Physiology, 192. pp. 263-273.

Quigley, Kate, Ramsby, Blake, Laffy, Patrick, Harris, Jessica, Mocellin, Veronique J.L., and Bay, Line K. (2022) Symbioses are restructured by repeated mass coral bleaching. Science Advances, 8 (49). eabq8349.

Miller, Michaela E., Santana, Marina F.M., Carsique, Madeline, Motti, Cherie A., Hamann, Mark, and Kroon, Frederieke J. (2022) Temporal patterns of plastic contamination in surface waters at the SS Yongala shipwreck, Great Barrier Reef, Australia. Environmental Pollution, 307. 119545.

Kingsford, Michael J., Krunes, Emily A., and Hall, April E. (2022) Testing the critical size at settlement hypothesis for two species of coral reef fish. Marine Ecology Progress Series, 681. pp. 87-101.

Underwood, Avril H., Derhè, Mia A., and Jacups, Susan (2022) Thermal imaging outshines spotlighting for detecting cryptic, nocturnal mammals in tropical rainforests. Wildlife Research, 49 (6). pp. 491-499.

Bouyoucos, Ian A., Simpfendorfer, Colin A., Planes, Serge, Schwieterman, Gail D., Weideli, Ornella C., and Rummer, Jodie L. (2022) Thermally insensitive physiological performance allows neonatal sharks to use coastal habitats as nursery areas. Marine Ecology Progress Series, 682. pp. 137-152.

Quigley, Kate M., Hein, Margaux, and Suggett, David J. (2022) Translating the 10 golden rules of reforestation for coral reef restoration. Conservation Biology, 36 (4). e13890.

Martins, A.P.B., Matley, JK., Heupel, M.R., Fisk, A.T., Chin, A., and Simpfendorfer, C.A. (2022) Trophic ecology of sympatric juvenile stingrays within a nursery area. Marine and Freshwater Research, 73 (5). pp. 676-686.

Fisher, Rebecca, Leis, Jeffrey M., Hogan, J. Derek, Bellwood, David R., Wilson, Shaun K., and Job, Suresh D. (2022) Tropical larval and juvenile fish critical swimming speed (U-crit) and morphology data. Scientific Data, 9 (1). 45.

Cardenosa, Diego, Shea, Stanley K., Zhang, Huarong, Fischer, Gunter A., Simpfendorfer, Colin A., and Chapman, Demian D. (2022) Two thirds of species in a global shark fin trade hub are threatened with extinction: Conservation potential of international trade regulations for coastal sharks. Conservation Letters, 15 (5). e12910.

D'Alberto, Brooke M., White, William T., Chin, Andrew, Dharmadi, and Simpfendorfer, Colin A. (2022) Untangling the Indonesian tangle net fishery: Describing a data-poor fishery targeting large, threatened rays (Superorder Batoidea). Aquatic Conservation: marine and freshwater ecosystems, 32 (2). pp. 366-384.

Condon, Kelly, Huerlimann, Roger, Charles, Tony, Lowrey, Ryan, Arbon, Phoebe, and Jerry, Dean R. (2022) Using bacterial whole genome sequencing to identify toxin genes associated with disease outbreaks in black tiger shrimp (Penaeus monodon) aquaculture production. Aquaculture, 546. 737255.

Pattiselanno, Freddy, Iriansul, Barnes, Paul A., and Arobaya, Agustina Y.S. (2022) Using local ecological knowledge to locate the western long-beaked echidna Zaglossus bruijnii on the Vogelkop Peninsula, West Papua, Indonesia. Oryx, 56 (4). pp. 636-638.

Tyabji, Zoya, Jabado, Rima W., and Sutaria, Dipani (2022) Utilization and trade of sharks and rays in the Andaman Islands, India. Marine Policy, 146. 105295.

Scott, Molly E., Tebbett, Sterling B., Whitman, Kirsty L., Thompson, Cassandra A., Mancini, Frank B., Heupel, Michelle R., and Pratchett, Morgan S. (2022) Variation in abundance, diversity and composition of coral reef fishes with increasing depth at a submerged shoal in the northern Great Barrier Reef. Reviews in Fish Biology and Fisheries, 32. pp. 941-962.

Kingsford, M.J., and Cole, R.G. (2022) Vertical distribution patterns of ichthyoplankton in temperate waters of New Zealand. Marine and Freshwater Research, 73 (4). pp. 503-519.

Tsai, Cheng-Han, Sweatman, Hugh P.A., Thibaut, Loïc M., and Connolly, Sean R. (2022) Volatility in coral cover erodes niche structure, but not diversity, in reef fish assemblages. Science Advances, 8 (24). eabm6858.

McCook, Laurence (2022) What Do we Need to Achieve Conservation Impact at the Rate and Scale Required to Avert Further Catastrophe? Limnology and Oceanography Bulletin, 31 (3). pp. 72-74.

Ingram, Daniel J., Prideaux, Margi, Hodgins, Nicola K., Frisch-Nwakanma, Heidrun, Avila, Isabel C., Collins, Tim, Cosentino, Mel, Keith-Diagne, Lucy W., Marsh, Helene, Shirley, Matthew H., Van Waerebeek, Koen, Djondo, Maximin K., Fukuda, Yusuke, Glaus, Kerstin B.J., Jabado, Rima W., Lang, Jeffrey W., Lüber, Sigrid, Manolis, Charlie, Webb, Grahame J.W., and Porter, Lindsay (2022) Widespread Use of Migratory Megafauna for Aquatic Wild Meat in the Tropics and Subtropics. Frontiers in Marine Science, 9. 837447.

Santana, Marina F.M., Kroon, Frederieke J., van Herwerden, Lynne, Vamvounis, George, and Motti, Cherie A. (2022) An assessment workflow to recover microplastics from complex biological matrices. Marine Pollution Bulletin, 179. 113676.

Murray, Nicholas J., Bunting, Pete, Canto, Robert F., Hilarides, Lammert, Kennedy, Emma V., Lucas, Richard M., Lyons, Mitchell B., Navarro, Alejandro, Roelfsema, Chris M., Rosenqvist, Ake, Spalding, Mark D., Toor, Maren, and Worthington, Thomas A. (2022) coastTrain: A Global Reference Library for Coastal Ecosystems. Remote Sensing, 14 (22). 5766.

Wilson, Shaun K., Fulton, Christopher J., Graham, Nicholas A.J., Abesamis, Rene A., Berkstrom, Charlotte, Coker, Darren J., Depczynski, Martial, Evans, Richard D., Fisher, Rebecca, Goetze, Jordan, Hoey, Andrew, Holmes, Thomas H., Kulbicki, Michel, Noble, Mae, Robinson, James P.W., Bradley, Michael, Akerlund, Carolina, Barrett, Luke T., Bucol, Abner A., Birt, Matthew J., Chacin, Dinorah H., Chong-Seng, Karen M., Eggertsen, Linda, Eggertsen, Maria, Ellis, David, Leung, Priscilla T.Y., Lam, Paul K.S., van Lier, Joshua, Matis, Paloma A., Perez-Matus, Alejandro, Piggott, Camilla V.H., Radford, Ben T., Tano, Stina, and Tinkler, Paul (2022) The contribution of macroalgae-associated fishes to small-scale tropical reef fisheries. Fish and Fisheries, 23 (4). pp. 847-861.

Salazar, Octavio R., Prasanna N, Arun, Cui, Guoxin, Bay, Line K., van Oppen, Madeleine J.H., Webster, Nicole S., and Aranda, Manuel (2022) The coral Acropora loripes genome reveals an alternative pathway for cysteine biosynthesis in animals. Science Advances, 8 (38). eabq0304.

Crisp, Samantha K., Tebbett, Sterling B., and Bellwood, David R. (2022) A critical evaluation of benthic phase shift studies on coral reefs. Marine Environmental Research, 178. 105667.

Hutson, Kate Suzanne, Mooney, Allan James, Ernst, Ingo, Brazenor, Alexander Karlis, Scheel, Max, and Atalah, Javier (2022) A decision support tool for parasite management in fish aquaculture. Reviews in Aquaculture, 14 (3). pp. 1656-1670.

Booth, Mark A., and Pirozzi, Igor (2022) The digestible histidine requirement of juvenile yellowtail kingfish Seriola lalandi. Aquaculture, 548 (Part 1). 737543.

Gong, Jie, Huang, Chencui, Yu, Kun, Li, Shaojing, Zeng, Chaoshu, and Ye, Haihui (2022) The effects of feeding ration and cheliped autotomy on the growth and expression of ecdysteroid receptor in early juvenile mud crabs, Scylla paramamosain. Aquaculture Reports, 25. 101206.

Marzonie, Magena R., Bay, Line K., Bourne, David G., Hoey, Andrew S., Matthews, Samuel, Nielsen, Josephine J.V., and Harrison, Hugo B. (2022) The effects of marine heatwaves on acute heat tolerance in corals. Global Change Biology, 29 (2). pp. 404-416.

Choi, Chi-Yeung, Xiao, Hui, Jia, Mingming, Jackson, Micha V., Lai, Yi-Chien, Murray, Nicholas J., Gibson, Luke, and Fuller, Richard A. (2022) An emerging coastal wetland management dilemma between mangrove expansion and shorebird conservation. Conservation Biology, 36 (5). e13905.

Keith, David A., Ferrer-Paris, Jose R., Nicholson, Emily, Bishop, Melanie J., Polidoro, Beth A., Ramirez-Llodra, Eva, Tozer, Mark G., Nel, Jeanne L., Mac Nally, Ralph, Gregr, Edward J., Watermeyer, Kate E., Essl, Franz, Faber-Langendoen, Don, Franklin, Janet, Lehmann, Caroline E.R., Etter, Andres, Roux, Dirk J., Stark, Jonathan S., Rowland, Jessica A., Brummitt, Neil A., Fernandez-Arcaya, Ulla C., Suthers, Iain M., Wiser, Susan K., Donohue, Ian, Jackson, Leland J., Pennington, R. Toby, Iliffe, Thomas M., Gerovasileiou, Vasilis, Giller, Paul, Robson, Belinda J., Pettorelli, Nathalie, Andrade, Angela, Lindgaard, Arild, Tahvanainen, Teemu, Terauds, Aleks, Chadwick, Michael A., Murray, Nicholas J., Moat, Justin, Pliscoff, Patricio, Zager, Irene, and Kingsford, Richard T. (2022) A function-based typology for Earth’s ecosystems. Nature, 610 (7932). pp. 513-518.

Tebbett, Sterling, Siqueira Correa, Alexandre, and Bellwood, David (2022) The functional roles of surgeonfishes on coral reefs: past, present and future. Reviews in Fish Biology and Fisheries, 32. pp. 387-439.

Iosilevskii, G., Kong, J.D., Meyer, C.G., Watanabe, Y.Y., Papastamatiou, Y.P., Royer, M.A., Nakamura, I., Sato, K., Doyle, T.K., Harman, L., Houghton, J.D.R., Barnett, A., Semmens, J.M., Maoileidigh, N.O., Drumm, A., O'Neill, R., Coffey, D.M., and Payne, N.L. (2022) A general swimming response in exhausted obligate swimming fish. Royal Society Open Science, 9. 211869.

Lucas, Richard M., German, Sophia, Metternicht, Graciela, Schmidt, Rebecca K., Owers, Christopher J., Prober, Suzanne M., Richards, Anna E., Tetreault-Campbell, Sally, Williams, Kristen J., Mueller, Norman, Tissott, Belle, Chua, Sean M.T., Cowood, Alison, Hills, Terry, Gunawardana, Dayani, McIntyre, Alexis, Chognard, Sebastien, Hurford, Clive, Planque, Carole, Punalekar, Suvarna, Clewley, Daniel, Sonnenschein, Ruth, Murray, Nicholas J., Manakos, Ioannis, Blonda, Palma, Owers, Kate, Roxburgh, Stephen, Kay, Heather, Bunting, Peter, and Horton, Claire (2022) A globally relevant change taxonomy and evidence-based change framework for land monitoring. Global Change Biology, 28 (21). pp. 6293-6317.

McKnight, Donald T., Huerlimann, Roger, Bower, Deborah S., Schwarzkopf, Lin, Alford, Ross A., and Zenger, Kyall R. (2022) The interplay of fungal and bacterial microbiomes on rainforest frogs following a disease outbreak. Ecosphere, 13 (7). e4037.

Ferreira, P., Kwan, G.T., Haldorson, S., Rummer, J.L., Tashiro, F., Castro, L.F.C., Tresguerres, M., and Wilson, J.M. (2022) A multi-tasking stomach: functional coexistence of acid-peptic digestion and defensive body inflation in three distantly related vertebrate lineages. Biology Letters, 18 (2). 20210583.

Norström, Albert V., Agarwal, Bin, Balvanera, Patricia, Baptiste, Brigitte, Bennett, Elena M., Brondízio, Eduardo, Biggs, Reinette, Campbell, Bruce, Carpenter, Stephen R., Castilla, Juan Carlos, Castro, Antonio J., Cramer, Wolfgang, Cumming, Graeme S., Felipe-lucia, María, Fischer, Joern, Folke, Carl, DeFries, Ruth, Gelcich, Stefan, Groth, Juliane, Ifejika Speranza, Chinwe, Jacobs, Sander, Hofmann, Johanna, Hughes, Terry P., Lam, David P.M., Loos, Jacqueline, Manyani, Amanda, Martín-López, Berta, Meacham, Megan, Moersberger, Hannah, Nagendra, Harini, Pereira, Laura, Polasky, Stephen, Schoon, Michael, Schultz, Lisen, Selomane, Odirilwe, and Spierenburg, Marja (2022) The programme on ecosystem change and society (PECS)–a decade of deepening social-ecological research through a place-based focus. Ecosystems and People, 18 (1). pp. 598-608.

Lubitz, Nicolas, Bradley, Michael, Sheaves, Marcus, Hammerschlag, Neil, Daly, Ryan, and Barnett, Adam (2022) The role of context in elucidating drivers of animal movement. Ecology and Evolution, 12 (7). e9128.

Sullivan-Stack, Jenna, Aburto-Oropeza, Octavio, Brooks, Cassandra M., Cabral, Reniel, Caselle, Jennifer E., Chan, Francis, Duffy, J. Emmett, Dunn, Daniel C., Friedlander, Alan M., Fulton-Bennett, Heather K., Gaines, Steven D., Gerber, Leah R., Hines, Ellen, Leslie, Heather M., Lester, Sarah E., MacCarthy, Jessica M.C., Maxwell, Sara M., Mayorga, Juan, Mccauley, Douglas J., Micheli, Fiorenza, Moffitt, Russell, Nickols, Kerry J., Palumbi, Stephen R., Pearsall, Douglas R., Pike, Elizabeth P., Pikitch, Ellen K., Sancho, Gorka, Spalding, Ana K., Suman, Daniel O., Sykora-Bodie, Seth T., and Grorud-Colvert, Kirsten (2022) A scientific synthesis of marine protected areas in the United States: status and recommendations. Frontiers in Marine Science, 9. 849927.

Schlaefer, Jodie A., Tebbett, Sterling B., Bowden, Casey L., Collins, William P., Duce, Stephanie, Hemingson, Christopher R., Huertas, Victor, Mihalitsis, Michalis, Morais, Juliano, Morais, Renato A., Siqueira, Alexandre C., Streit, Robert P., Swan, Sam, Valenzuela, Jessica, and Bellwood, David R. (2022) A snapshot of sediment dynamics on an inshore coral reef. Marine Environmental Research, 181. 105763.

Smith, Hillary A., Boström-Einarsson, Lisa, and Bourne, David G. (2022) A stratified transect approach captures reef complexity with canopy-forming organisms. Coral Reefs, 41. pp. 897-905.

Wheeler, Carolyn R., Lang, Bethan J., Mandelman, John W., and Rummer, Jodie L. (2022) The upper thermal limit of epaulette sharks (Hemiscyllium ocellatum) is conserved across three life history stages, sex and body size. Conservation Physiology, 10 (1). coac074.

Wallace, Kenneth, Kiatkoski Kim, Milena, Álvarez-Romero, Jorge G., Pannell, David, Hill, Rosemary, and Marshall, Melissa (2022) A well-being framework for cross-cultural assessment of development scenarios: A case study from North-Western Australia. People and Nature, 4 (6). pp. 1575-1591.

Lau, Sally C.Y., Strugnell, Jan M., Sands, Chester J., Silva, Catarina N.S., and Wilson, Nerida G. (2021) Evolutionary innovations in Antarctic brittle stars linked to glacial refugia. Ecology and Evolution, 11 (23). pp. 17428-17446.

McShane, Paul, Knuckey, Ian, and Sen, Sevaly (2021) Access and allocation in fisheries: The Australian experience. Marine Policy, 132. 104702.

Emmons, Sophia M., D'Alberto, Brooke M., Smart, Jonathan J., and Simpfendorfer, Colin A. (2021) Age and growth of tiger shark (Galeocerdo cuvier) from Western Australia. Marine and Freshwater Research, 72 (7). pp. 950-963.

Tebbett, Sterling B., and Bellwood, David R. (2021) Algal turf productivity on coral reefs: a meta-analysis. Marine Environmental Research, 168. 105311.

Mason, B., Cooke, I., Moya, A., Augustin, R., Lin, M.F., Satoh, N., Bosch, T.C.G., Bourne, D.G., Hayward, D.C., Andrade, N., Forêt, S., Ying, H., Ball, E.E., and Miller, D.J. (2021) AmAMP1 from Acropora millepora and damicornin define a family of coral-specific antimicrobial peptides related to the Shk toxins of sea anemones. Developmental and Comparative Immunology, 114. 103866.

Narvaez, Pauline, Yong, Russell Qi-Yung, Grutter, Alexandra Sara, and Hutson, Kate Suzanne (2021) Are cleaner fish clean? Marine Biology, 168. 59.

Raoult, Vincent, Grant, Michael I., Barbosa Martins, Ana Paula, Feitosa, Leonardo Manir, Braccini, Matias, Cardeñosa, Diego, Carlson, John, Chin, Andrew, Curtis, Tobey, Carvalho Costa, Luís Fernando, Rodrigues Filho, Luís Fernando, Giarrizzo, Tommaso, Nunes, Jorge Luiz S., Sales, João Bráullio L., Williamson, Jane E., and Simpfendorfer, Colin (2021) Assigning shark fin origin using species distribution models needs a reality check. Biology Letters, 17 (7).

Hirschfeld, Maximilian, Dudgeon, Christine, Sheaves, Marcus, and Barnett, Adam (2021) Barriers in a sea of elasmobranchs: from fishing for populations to testing hypotheses in population genetics. Global Ecology and Biogeography, 30 (11). pp. 2147-2163.

Schlaefer, Jodie A., Wolanski, Eric, Lambrechts, Jonathan, and Kingsford, Michael J. (2021) Behavioural and oceanographic isolation of an island-based jellyfish (Copula sivickisi, Class Cubozoa) population. Scientific Reports, 11. 10280.

Smith, Olivia M., Taylor, Joseph M., Echeverri, Alejandra, Northfield, Tobin, Cornell, Kevin A., Jones, Matthew S., Latimer, Christopher E., Owen, Jeb P., Snyder, William E., and Kennedy, Christina M. (2021) Big wheel keep on turnin': linking grower attitudes, farm management, and delivery of avian ecosystem services. Biological Conservation, 254. 108970.

Velu, Chinnathambi, Karthikeyan, Obulisamy Parthiba, Brinkman, Diane L., Cirés, Samuel, and Heimann, Kirsten (2021) Biomass pre-treatments of the N2-fixing cyanobacterium Tolypothrix for co-production of methane. Chemosphere, 283. 131246.

Preez, Ryan du, Magnusson, Marie, Majzoub, Marwan E., Thomas, Torsten, Carl, Christina, Glasson, Christopher R.K., Panchal, Sunil K., and Brown, Lindsay (2021) Brown seaweed sargassum siliquosum as an intervention for diet-induced obesity in male wistar rats. Nutrients, 13 (6). 1754.

Queirós, José P., Ramos, Jaime A., Cherel, Yves, Franzitta, Marco, Duarte, Bernardo, Rosa, Rui, Monteiro, Filipa, Figueiredo, Andreia, Strugnell, Jan M., Fukuda, Yuki, Stevens, Darren W., and Xavier, José C. (2021) Cephalopod fauna of the Pacific Southern Ocean using Antarctic toothfish (Dissostichus mawsoni) as biological samplers and fisheries bycatch specimens. Deep-sea Research Part I: Oceanographic Research Papers, 174. 103571.

Brunner, Christopher, Uthicke, Sven, Ricardo, Gerard F., Hoogenboom, Mia O., and Negri, Andrew P. (2021) Climate change doubles sedimentation-induced coral recruit mortality. Science of the Total Environment, 768. 143897.

Silva, Catarina N. S., Young, Emma F., Murphy, Nicholas P., Bell, James J., Green, Bridget S., Morley, Simon A., Duhamel, Guy, Cockcroft, Andrew C., and Strugnell, Jan M. (2021) Climatic change drives dynamic source–sink relationships in marine species with high dispersal potential. Ecology and Evolution, 11 (6). pp. 2535-2550.

Nonghanphithak, Ditthawat, Chaiprasert, Angkana, Smithtikarn, Saijai, Kamolwat, Phalin, Pungrassami, Petchawan, Chongsuvivatwong, Virasakdi, Mahasirimongkol, Surakameth, Reechaipichitkul, Wipa, Leepiyasakulchai, Chaniya, Phelan, Jody E., Blair, David, Clark, Taane G., and Faksri, Kiatichai (2021) Clusters of drug-resistant mycobacterium tuberculosis detected by whole-genome sequence analysis of nationwide sample, Thailand, 2014–2017. Emerging Infectious Diseases, 27 (3). pp. 813-822.

Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Heyward, Andrew (2021) Co-culture with grazers can improve survival and growth of multiple coral species. Aquaculture, 544. 737095.

Tebbett, Sterling B., Morais, Renato A., Goatley, Christopher, and Bellwood, David R. (2021) Collapsing ecosystem functions on an inshore coral reef. Journal of Environmental Management, 289. 112471.

Gardner, Jonathan P.A., Nunes Soares Silva, Catarina N.S., Norrie, Craig R., and Dunphy, Brendon J. (2021) Combining genotypic and phenotypic variation in a geospatial framework to identify sources of mussels in northern New Zealand. Scientific Reports, 11. 8196.

Cooke, Steven J., Cramp, Rebecca L., Madliger, Christine L., Bergman, Jordanna N., Reeve, Connor, Rummer, Jodie L., Hultine, Kevin R., Fuller, Andrea, French, Susannah S., and Franklin, Craig E. (2021) Conservation physiology and the COVID-19 pandemic. Conservation Physiology, 9 (1). coaa139.

Xiao, Hui, Chadès, Iadine, Hill, Narelle, Murray, Nicholas, Fuller, Richard A., and Mcdonald-Madden, Eve (2021) Conserving migratory species while safeguarding ecosystem services. Ecological Modelling, 442. 109442.

Ledee, Elodie J.I., Heupel, Michelle R., Taylor, Matthew D., Harcourt, Robert G., Jaine, Fabrice R.A., Huveneers, Charlie, Udyawer, Vinay, Campbell, Hamish A., Babcock, Russell C., Hoenner, Xavier, Barnett, Adam, Braccini, Matias, Brodie, Stephanie, Butcher, Paul A., Cadiou, Gwenael, Dwyer, Ross G., Espinoza, Mario, Ferreira, Luciana C., Fetterplace, Lachlan, Fowler, Anthony, Harborne, Alastair R., Knott, Nathan A., Lowry, Michael, Mcallister, Jaime, McAuley, Rory, Meekan, Mark, Mills, Kade, Peddemors, Victor M., Pillans, Richard, Semmens, Jayson, Smoothey, Amy F., Speed, Conrad, Stehfest, Kilian, van der Meulen, Dylan, and Simpfendorfer, Colin A. (2021) Continental-scale acoustic telemetry and network analysis reveal new insights into stock structure. Fish and Fisheries, 22 (5). pp. 987-1005.

Bartes, Saia, Simpfendorfer, Colin, Walker, Terence I., King, Carissa, Loneragan, Neil, and Braccini, Matías (2021) Conventional tagging of sharks in Western Australia: the main commercial species exhibit contrasting movement patterns. Marine and Freshwater Research, 72 (11).

Bairos-Novak, Kevin R., Hoogenboom, Mia O., van Oppen, Madeleine J., and Connolly, Sean (2021) Coral adaptation to climate change: meta-analysis reveals high heritability across multiple traits. Global Change Biology, 27 (22). pp. 5694-5710.

Russ, Garry R., Rizzari, Justin R, Abesamis, Rene A., and Alcala, Angel C. (2021) Coral cover a stronger driver of reef fish trophic biomass than fishing. Ecological Applications, 31 (1). e02224.

Peixoto, Raquel S., Sweet, Michael, Villela, Helena D.M., Cardoso, Pedro, Thomas, Torsten, Voolstra, Christian R., Høj, Lone, and Bourne, David G. (2021) Coral probiotics: premise, promise, prospects. Annual Review of Animal Biosciences, 9. pp. 265-288.

Deng, Zhixiong, Ni, Yijun, Wang, Jinhui, Ebido, Chike Chukwuenyem, Odii, Elijah Chibueze, Okoro, Joseph Onyekwere, Blair, David, Hu, Wei, and Yin, Mingbo (2021) Cryptic diversity and gene introgression of Moinidae (Crustacea: Cladocera) in Nigeria. Contributions to Zoology, 90. pp. 463-486.

Morais, Juliano, Morais Araujo, Renato A., Tebbett, Sterling B., Pratchett, Morgan S., and Bellwood, David R. (2021) Dangerous demographics in post-bleach corals reveal boom-bust versus protracted declines. Scientific Reports, 11. 18787.

Murray, Nicholas J., Kennedy, Emma V., Alvarez-Romero, Jorge G., and Lyons, Mitchell B. (2021) Data freshness in ecology and conservation. Trends in Ecology & Evolution, 36 (6). pp. 485-487.

Nordberg, Eric J., Caley, M. Julian, and Schwarzkopf, Lin (2021) Designing solar farms for synergistic commercial and conservation outcomes. Solar Energy, 228. pp. 586-593.

Rigg, Damian P., Courtney, Robert L., Seymour, Jamie E., and Jones, Clive M. (2021) Determining suitable thermal regimes for early instar redclaw juveniles, Cherax quadricarinatus (von Martens, 1868) (Decapoda, Parastacidae), for a proposed nursery phase. Freshwater Crayfish, 26 (1). pp. 17-23.

Hillcoat, Suzanne K., Curnock, Matthew I., Gardiner, Naomi M., and Birtles, R. Alastair (2021) Developing protocols for in‐water morphometric measurements of cetaceans using stereo‐videogrammetry. Marine Mammal Science, 37 (1). pp. 45-63.

Arbon, Phoebe M., Silva, Catarina N.S., Jones, David B., Jaccoud, Damian, Gervis, Mark, Jerry, Dean R., and Strugnell, Jan M. (2021) Development and validation of a SNP-based genotyping tool for pedigree establishment in Australian greenlip abalone Haliotis laevigata Donovan, 1808. Aquaculture Reports, 20. 100746.

Bucol, Abner A., Abesamis, Rene A., Stockwell, Brian L., Lowe, Jake R., and Russ, Garry R. (2021) Development of reproductive potential in protogynous coral reef fishes within Philippine no-take marine reserves. Journal of Fish Biology, 99 (5). pp. 1561-1575.

Schunter, Celia, Jarrold, Michael D., Munday, Philip L., and Ravasi, Timothy (2021) Diel pCO2 fluctuations alter the molecular response of coral reef fishes to ocean acidification conditions. Molecular Ecology, 30 (20). pp. 5105-5118.

Banh, Quyen Q.T., Domingos, Jose A., Pinto, Ricardo C.C., Nguyen, Kien T., and Jerry, Dean R. (2021) Dietary 17 β-oestradiol and 17 α-ethinyloestradiol alter gonadal morphology and gene expression of the two sex-related genes, dmrt1 and cyp19a1a, in juvenile barramundi (Lates calcarifer Bloch). Aquaculture Research, 52 (4). pp. 1414-1430.

Tsang, Hin Hung, Domingos, Jose A., Westaway, Jacob A.F., Kam, Maximilian H.Y., Huerlimann, Roger, and Bastos Gomes, Giana (2021) Digital droplet PCR-based environmental DNA tool for monitoring Cryptocaryon irritans in a marine fish farm from Hong Kong. Diversity, 13 (8). 350.

Jackson, Micha V., Fuller, Richard A., Gan, Xiaojing, Li, Jing, Mao, Dehua, Melville, David S., Murray, Nicholas, Wang, Zongming, and Choi, Chi-Yeung (2021) Dual threat of tidal flat loss and invasive Spartina alterniflora endanger important shorebird habitat in coastal mainland China. Journal of Environmental Management, 278 (Part 2). 111549.

Terence, Celestine, Domingos, Jose A., Angelo Uichanco, Joseph, Monteil, Yann, Monteil, Loïc, De Braux, Emmanuel, Banh, Quyen Q.T., Gibson-Kueh, Susan, and Jerry, Dean R. (2021) Early sex change of barramundi Lates calcarifer farmed in Singapore. Aquaculture Reports, 20. 100712.

Sheaves, Marcus, Mattone, Carlo, Connolly, Rod M., Hernandez, Stephanie, Nagelkerken, Ivan, Murray, Nicholas, Ronan, Michael, Waltham, Nathan John, and Bradley, Michael (2021) Ecological constraint mapping: understanding uutcome-limiting bottlenecks for improved environmental decision-making in marine and coastal environments. Frontiers in Marine Science, 8. 717448.

Baje, Leontine, Chin, Andrew, White, William T., and Simpfendorfer, Colin (2021) Ecological risk assessment of elasmobranchs caught in the Gulf of Papua prawn fishery. Aquatic Conservation: marine and freshwater ecosystems, 31 (11). pp. 3100-3110.

Trujillo-Gonzalez, Alejandro, Pérez-Pacheco, Rafael, Realpe, Emilio, Granados-Echegoyen, Carlos, Platzer, Edward G., Ortiz-Hernández, Yolanda Donají, and Espinosa-Rodríguez, Mariana (2021) Effect of Habitat Complexity on Parasitic Efficiency of Romanomermis iyengari1 on Larvae of the Mosquito Culex quinquefasciatus. Southwestern Entomologist, 46 (3). pp. 657-665.

Liu, Angela, Pirozzi, Igor, Codabaccus, Basseer M., Stephens, Frances, Francis, David S., Sammut, Jesmond, and Booth, Mark A. (2021) Effects of dietary choline on liver lipid composition, liver histology and plasma biochemistry of juvenile yellowtail kingfish (Seriola lalandi). British Journal of Nutrition, 125 (12). pp. 1344-1358.

Wang, Lin, Wang, Shuhong, Zeng, Chaoshu, Wang, Yuyue, and Zeng, Chunxiao (2021) Effects of food concentration and photoperiod on egg production, female life expectancy and population dynamics of the paracalanid copepod, Bestiolina amoyensis. Frontiers in Marine Science, 8. 788744.

Camus, Thomas, Rolla, Lucrezia, Jiang, Jufeng, and Zeng, Chaoshu (2021) Effects of microalgal food quantity on several productivity-related parameters of the calanoid copepod Bestiolina similis (Calanoida: Paracalanidae). Frontiers in Marine Science, 8. 812240.

Berry, K.L.E., Hess, S., Clark, T.D., Wenger, A.S., Hoogenboom, M.O., and Negri, A.P. (2021) Effects of suspended coal particles on gill structure and oxygen consumption rates in a coral reef fish. Marine Pollution Bulletin, 169. 112459.

Barton, Jonathan A., Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2021) Efficacy of chemical treatments for Acropora-eating flatworm infestations. Aquaculture, 532. 735978.

Santos, Catarina Pereira, Sampaio, Eduardo, Pereira, Beatriz P., Pegado, Maria Rita, Borges, Francisco O., Wheeler, Carolyn R., Bouyoucos, Ian A., Rummer, Jodie L., Frazão Santos, Catarina, and Rosa, Rui (2021) Elasmobranch responses to experimental warming, acidification, and oxygen loss—a meta-analysis. Frontiers in Marine Science, 8. 735377.

Harding, Lucy, Jackson, Andrew, Barnett, Adam, Donohue, Ian, Halsey, Lewis, Huveneers, Charles, Meyer, Carl, Papastamatiou, Yannis, Semmens, Jayson M., Spencer, Erin, Watanabe, Yuuki, and Payne, Nicholas (2021) Endothermy makes fishes faster but does not expand their thermal niche. Functional Ecology, 35 (9). pp. 1951-1959.

Chilton, Daniel, Hamilton, David P., Nagelkerken, Ivan, Cook, Perran, Hipsey, Matthew R., Reid, Robert, Sheaves, Marcus, Waltham, Nathan J., and Brookes, Justin (2021) Environmental flow requirements of estuaries: providing resilience to current and future climate and direct anthropogenic changes. Frontiers in Environmental Science, 9. 764218.

Lee, Calvin K.F., Nicholson, Emily, Duncan, Clare, and Murray, Nicholas J. (2021) Estimating changes and trends in ecosystem extent with dense time-series satellite remote sensing. Conservation Biology, 35 (1). pp. 325-335.

Rigg, Damian P., Courtney, Robert L., Seymour, Jamie E., and Jones, Clive M. (2021) Evaluation of four practical diets on the growth and survival of juvenile redclaw, Cherax quadricarinatus (von Martens, 1868). Freshwater Crayfish, 26 (1).

Schmidt-Roach, Alicia C.J., Bruels, Christine C., Barnett, Adam, Miller, Adam D., Sherman, Craig D.H., Ebert, David A., Schmidt-roach, Sebastian, da Silva, Charlene, Wilke, Christopher G., Thorburn, Craig, Mangel, Jeffrey C., Ezcurra, Juan Manuel, Irigoyen, Alejo, Jaureguizar, Andrés Javier, Braccini, Matias, Alfaro-Shigueto, Joanna, Duffy, Clinton, and Shivji, Mahmood S. (2021) Evidence of historical isolation and genetic structuring among broadnose sevengill sharks (Notorynchus cepedianus) from the world’s major oceanic regions. Reviews in Fish Biology and Fisheries, 31 (2). pp. 433-447.

Earls, Megan R., Steinig, Eike J., Monecke, Stefan, Samaniego Castruita, José A., Simbeck, Alexandra, Schneider-Brachert, Wulf, Vremerǎ, Teodora, Dorneanu, Olivia S., Loncaric, Igor, Bes, Michèle, Lacoma, Alicia, Aymerich, Cristina Prat, Wernery, Ulrich, Armengol-Porta, Marc, Blomfeldt, Anita, Duchene, Sebastian, Bartels, Mette D., Ehricht, Ralf, and Coleman, David C. (2021) Exploring the evolution and epidemiology of european cc1mrsa-iv: Tracking a multidrug-resistant community-associated meticillin-resistant staphylococcus aureus clone. Microbial Genomics, 7 (7). 000601.

Voolstra, Christian R., Suggett, David J., Peixoto, Raquel S., Parkinson, John E., Quigley, Kate M., Silveira, Cynthia B., Sweet, Michael, Muller, Erinn M., Barshis, Daniel J., Bourne, David G., and Aranda, Manuel (2021) Extending the natural adaptive capacity of coral holobionts. Nature Reviews Earth and Environment, 2. pp. 747-762.

Budd, Alyssa M., Cooper, Madalyn K., Le Port, Agnès, Schils, Tom, Mills, Matthew S., Deinhart, Mari E., Huerlimann, Roger, and Strugnell, Jan M. (2021) First detection of critically endangered scalloped hammerhead sharks (Sphyrna lewini) in Guam, Micronesia, in five decades using environmental DNA. Ecological Indicators, 127. 107649.

Shapiro, Aurélie C., Grantham, Hedley S., Aguilar-Amuchastegui, Naikoa, Murray, Nicholas J., Gond, Valery, Bonfils, Djoan, and Rickenbach, Olivia (2021) Forest condition in the Congo Basin for the assessment of ecosystem conservation status. Ecological Indicators, 122. 107268.

Mihalitsis, Michalis, and Bellwood, David R. (2021) Functional groups in piscivorous fishes. Ecology and Evolution, 11 (18). pp. 12765-12778.

Wheeler, Carolyn R., Rummer, Jodie L., Bailey, Barbara, Lockwood, Jamie, Vance, Shelby, and Mandelman, John W. (2021) Future thermal regimes for epaulette sharks (Hemiscyllium ocellatum): growth and metabolic performance cease to be optimal. Scientific Reports, 11 (1). 454.

Lal, Monal M., Waqairatu, Salote S., Zenger, Kyall R., Nayfa, Maria G., Pickering, Timothy D., Singh, Avinash, and Southgate, Paul C. (2021) The GIFT that keeps on giving? A genetic audit of the Fijian Genetically Improved Farmed Tilapia (GIFT) broodstock nucleus 20 years after introduction. Aquaculture, 537. 736524.

González-Paredes, Daniel, Ariel, Ellen, David, Maria Florencia, Ferrando, Virginia, Marsh, Helene, and Hamann, Mark (2021) Gastrointestinal transit times in juvenile green turtles: an approach for assessing digestive motility disorders. Journal of Experimental Marine Biology and Ecology, 544. 151616.

Domingos, Jose A., Goldsbury, Julie A., Bastos Gomes, Giana, Smith, Brett G., Tomlinson, Christopher, Bade, Tim, Sander, Corey, Forrester, Justin, and Jerry, Dean R. (2021) Genotype by environment interactions of harvest growth traits for barramundi (Lates calcarifer) commercially farmed in marine vs. freshwater conditions. Aquaculture, 532. 735989.

Lowe, Jake R., Russ, Garry R., Bucol, Abner A., Abesamis, Rene A., and Choat, John H. (2021) Geographic variability in the gonadal development and sexual ontogeny of Hemigymnus, Cheilinus and Oxycheilinus wrasses among Indo-Pacific coral reefs. Journal of Fish Biology, 99 (4). pp. 1348-1363.

Silva, Catarina N.S., Murphy, Nicholas P., Bell, James J., Green, Bridget S,, Duhamel, Guy, Cockcroft, Andrew C., Hernández, Cristián E., and Strugnell, Jan M. (2021) Global drivers of recent diversification in a marine species complex. Molecular Ecology, 30 (5). pp. 1223-1236.

Hill, Narelle K., Woodworth, Bradley K., Phinn, Stuart R., Murray, Nicholas J., and Fuller, Richard A. (2021) Global protected‐area coverage and human pressure on tidal flats. Conservation Biology, 35 (3). pp. 933-943.

Dibattista, Joseph D., Taylor, Brett M., Hobbs, Jean Paul A., Sinclair-Taylor, Tane H., Coker, Darren J., Trip, Elizabeth D.L., Choat, J. Howard, Lozano-Cortés, Diego, Kandler, Nora M., and Berumen, Michael L. (2021) Growth patterns of specialized reef fishes distributed across the Red Sea to Gulf of Aden. Environmental Biology of Fishes, 104 (8). pp. 967-976.

Narvaez, Pauline, Morais, Renato A., Hutson, Kate S., McCormick, Mark I., and Grutter, Alexandra S. (2021) Habitat degradation drives increased gnathiid isopod ectoparasite infection rate on juvenile but not adult fish. Coral Reefs, 40. pp. 1867-1877.

Doll, Peter C., Munday, Philip L., Bonin, Mary C., and Jones, Geoffrey P. (2021) Habitat specialisation and overlap in coral reef gobies of the genus Eviota (Teleostei: Gobiidae). Marine Ecology-Progress Series, 677. pp. 81-94.

Hall, April E., and Kingsford, Michael J. (2021) Habitat type and complexity drive fish assemblages in a tropical seascape. Journal of Fish Biology, 99 (4). pp. 1364-1379.

Vermeiren, P., Lennard, C., and Trave, C. (2021) Habitat, sexual and allometric influences on morphological traits of intertidal crabs. Estuaries and Coasts, 44. pp. 1344-1362.

Pacoureau, Nathan, Rigby, Cassandra L., Kyne, Peter M., Sherley, Richard B., Winker, Henning, Carlson, John K., Fordham, Sonja V., Barreto, Rodrigo, Fernando, Daniel, Francis, Malcolm P., Jabado, Rima W., Herman, Katelyn B., Liu, Kwang-Ming, Marshall, Andrea D., Pollom, Riley A., Romanov, Evgeny V., Simpfendorfer, Colin A., Yin, Jamie S., Kindsvater, Holly K., and Dulvy, Nicholas K. (2021) Half a century of global decline in oceanic sharks and rays. Nature, 589. pp. 567-571.

Thiault, Lauric, Jupiter, Stacy, Johnson, Johanna E., Cinner, Joshua E., Jarvis, Rebecca M., Heron, Scott F., Maina, Joseph M., Marshall, Nadine A., Marshall, Paul A., and Claudet, Joachim (2021) Harnessing the potential of vulnerability assessments for managing social-ecological systems. Ecology and Society, 26 (2). 1.

McGuire, Amy V., and Northfield, Tobin D. (2021) Identification and evaluation of endemic Metarhizium strains for biological control of banana rust thrips. Biological Control, 162. 104712.

Deryckere, Astrid, Styfhals, Ruth, Elagoz, Ali Murat, Maes, Gregory E., and Seuntjens, Eve (2021) Identification of neural progenitor cells and their progeny reveals long distance migration in the developing octopus brain. eLife, 10. e69161.

Cooper, Madalyn K., Huerlimann, Roger, Edmunds, Richard C., Budd, Alyssa M., Le Port, Agnes, Kyne, Peter M., Jerry, Dean R., and Simpfendorfer, Colin A. (2021) Improved detection sensitivity using an optimal eDNA preservation and extraction workflow and its application to threatened sawfishes. Aquatic Conservation: marine and freshwater ecosystems, 31 (8). pp. 2131-2148.

Banh, Quyen Q. T., Guppy, Jarrod L., Domingos, Jose A., Budd, Alyssa M., Pinto, Ricardo C. C., Marc, Adrien F., and Jerry, Dean R. (2021) Induction of precocious females in the protandrous barramundi (Lates calcarifer) through implants containing 17β-estradiol - effects on gonadal morphology, gene expression and DNA methylation of key sex genes. Aquaculture, 539. 736601.

Santana, Marina F.M., Dawson, Amanda L., Motti, Cherie, van Herwerden, Lynne, Lefevre, Carine, and Kroon, Frederieke (2021) Ingestion and depuration of microplastics by a planktivorous coral reef fish, Pomacentrus amboinensis. Frontiers in Environmental Science, 9. 641135.

Sweet, Michael, Villela, Helena, Keller-Costa, Tina, Costa, Rodrigo, Romano, Stefano, Bourne, David G., Cárdenas, Anny, Huggett, Megan J., Kerwin, Allison H., Kuek, Felicity, Medina, Monica, Meyer, Julie L., Müller, Moritz, Pollock, F. Joseph, Rappé, Michael S., Sere, Mathieu, Sharp, Koty H., Voolstra, Christian R., Zaccardi, Nathan, Ziegler, Maren, and Peixoto, Raquel (2021) Insights into the cultured bacterial fraction of corals. mSystems, 6 (3). e01249-20.

Liu, Fang, Shi, Wenyuan, Ye, Haihui, Zeng, Chaoshu, and Zhu, Zhihuang (2021) Insulin-like androgenic gland hormone 1 (IAG1) regulates sexual differentiation in a hermaphrodite shrimp through feedback to neuroendocrine factors. General and Comparative Endocrinology, 303. 113706.

Taillebois, Laura, Davenport, Danielle, Barton, Diane, Crook, David, Saunders, Thor, Hearnden, Mark, Saunders, Richard J., Newman, Stephen J., Travers, Michael J., Dudgeon, Christine L., Maher, Safia L., and Ovenden, Jennifer R. (2021) Integrated analyses of SNP-genotype and environmental data in a continuously distributed snapper species (Lutjanus johnii, Bloch, 1792) reveals a mosaic of populations and a challenge for sustainable management. ICES Journal of Marine Science, 78 (9). pp. 3212-3229.

Espinoza, Mario, Ledee, Elodie J.I., Smoothey, Amy F., Heupel, Michelle, Peddemors, Victor M., Tobin, Andrew J., and Simpfendorfer, Colin A. (2021) Intra-specific variation in movement and habitat connectivity of a mobile predator revealed by acoustic telemetry and network analyses. Marine Biology, 168 (6). 80.

Bouyoucos, Ian, Trujillo, Jose E., Weideli, Ornella C., Nakamura, Nao, Mourier, Johann, Planes, Serge, Simpfendorfer, Colin A., and Rummer, Jodie L. (2021) Investigating links between thermal tolerance and oxygen supply capacity in shark neonates from a hyperoxic tropical environment. Science of the Total Environment, 782. 146854.

Waltham, Nathan J., Wegscheidl, Carla, Volders, Adrian, Smart, James C.R., Hasan, Syezlin, Ledee, Elodie, and Waterhouse, Jane (2021) Land use conversion to improve water quality in high DIN risk, low-lying sugarcane areas of the Great Barrier Reef catchments. Marine Pollution Bulletin, 167. 112373.

Kyne, P.M., Oetinger, M., Grant, M.I., and Feutry, P. (2021) Life history of the Critically Endangered largetooth sawfish: a compilation of data for population assessment and demographic modelling. Endangered Species Research, 44. pp. 79-88.

Campbell, Matthew J., McLennan, Mark F., Courtney, Anthony J., and Simpfendorfer, Colin A. (2021) Life-history characteristics of the eastern shovelnose ray, Aptychotrema rostrata (Shaw, 1794), from southern Queensland, Australia. Marine and Freshwater Research, 72 (9). pp. 1280-1289.

Grant, Michael I., White, William T., Amepou, Yolarnie, Baje, Leontine, Diedrich, Amy, Ibana, Dotty, Jogo, Dick J., Jogo, Stanley, Kyne, Peter M., Li, Owen, Mana, Ralph, Mapmani, Nigel, Nagul, Anthony, Roeger, Darcy, Simpfendorfer, Colin A., and Chin, Andrew (2021) Local knowledge surveys with small-scale fishers indicate challenges to sawfish conservation in southern Papua New Guinea. Aquatic Conservation: marine and freshwater ecosystems, 31 (10). pp. 2883-2900.

Chapman, Demian D., Ali, Khadeeja, MacNeil, M. Aaron, Heupel, Michelle R., Meekan, Mark, Harvey, Euan S., Simpfendorfer, Colin A., and Heithaus, Michael R. (2021) Long-term investment in shark sanctuaries. Science, 372 (6541). p. 473.

Lee, Calvin K.F., Duncan, Clare, Nicholson, Emily, Fatoyinbo, Temilola E., Lagomasino, David, Thomas, Nathan, Worthington, Thomas A., and Murray, Nicholas J. (2021) Mapping the extent of mangrove ecosystem degradation by integrating an ecological conceptual model with satellite data. Remote Sensing, 13 (11). 2047.

Glasl, Bettina, Haskell, Jasmine B., Aires, Tania, Serrão, Ester, Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2021) Microbial surface biofilm responds to the growth-reproduction-senescence cycle of the dominant coral reef macroalgae sargassum spp. Life, 11 (11). 1199.

Infante Villamil, Sandra, Huerlimann, Roger, and Jerry, Dean R. (2021) Microbiome diversity and dysbiosis in aquaculture. Reviews in Aquaculture, 13 (2). pp. 1077-1096.

Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole S. (2021) Microbiome-mediated mechanisms contributing to the environmental tolerance of reef invertebrate species. Marine Biology, 168 (6). 89.

Furuta, Takeshi, and Neoh, Tze Loon (2021) Microencapsulation of food bioactive components by spray drying: a review. Drying Technology, 39 (12). pp. 1800-1831.

Lavin, Charles P., Jones, Geoffrey P., Williamson, David H., and Harrison, Hugo B. (2021) Minimum size limits and the reproductive value of numerous, young, mature female fish. Proceedings of the Royal Society B: Biological Sciences, 288 (1946). 20202714.

Salmerón, Cristina, Harter, Till S., Kwan, Garfield T., Roa, Jinae N., Blair, Salvatore D., Rummer, Jodie L., Shiels, Holly A., Goss, Greg G., Wilson, Rod W., and Tresguerres, Martin (2021) Molecular and biochemical characterization of the bicarbonate-sensing soluble adenylyl cyclase from a bony fish, the rainbow trout Oncorhynchus mykiss. Interface Focus, 11 (2). 20200026.

Tavakol, Sareh, Blair, David, Morgan, Jess A.T., Halajian, Ali, and Luus-Powell, Wilmien J. (2021) Molecular characterization of two Australian temnocephalans (Temnocephalida, Platyhelminthes) introduced with alien crayfish (Parastacidae, Decapoda) into South Africa. Aquaculture Research, 52 (10). pp. 4613-4618.

Clementi, Gina M., Bakker, Judith, Flowers, Kathryn I., Postaire, Bautisse D., Babcock, Elizabeth, Bond, Mark E., Buddo, Dayne, Cardeñosa, Diego, Currey-Randall, Leanne, Goetze, Jordan S., Harvey, Euan S., Heupel, Michelle, Kiszka, Jeremy J., Kyne, Fabian, MacNeil, M. Aaron, Meekan, Mark G., Rees, Matthew J., Simpfendorfer, Colin A., Speed, Conrad W., Heithaus, Michael R., and Chapman, Demian D. (2021) Moray eels are more common on coral reefs subject to higher human pressure in the greater Caribbean. iScience, 24 (3). 102097.

Bongaerts, Pim, Cooke, Ira R., Ying, Hua, Wels, Dagmar, den Haan, Stijn, Hernandez-Agreda, Alejandra, Brunner, Christopher A., Dove, Sophie, Englebert, Norbert, Eyal, Gal, Foret, Sylvain, Grinblat, Mila, Hay, Kyra B., Harii, Saki, Hayward, David C., Lin, Yu, Morana, Mihaljevi C., Moya, Aurelie, Muir, Paul, Sinniger, Frederic, Smallhorn-West, Patrick, Torda, Gergely, Ragan, Mark A., van Oppen, Madeleine J.M., and Hoegh-Guldberg, Ove (2021) Morphological stasis masks ecologically divergent coral species on tropical reefs. Current Biology, 31 (11). 2286-2298.e8.

Rigg, Damian P., Courtney, Robert L., Jones, Clive M., and Seymour, Jamie E. (2021) Morphology and weight-length relationships for the first six instars of Cherax quadricarinatus (von Martens, 1868). Freshwater Crayfish, 26 (1). pp. 9-16.

Guirkinger, Lucie, Rojas-Perea, Stefany, Ender, Isabel, Ramsden, Mark, Lenton-Lyons, Charley, and Geldmann, Jonas (2021) Motivations for compliance in Peruvian manta ray fisheries. Marine Policy, 124. 104315.

Narvaez, Pauline, Vaughan, David Brendan, Grutter, Alexandra Sara, and Hutson, Kate Suzanne (2021) New perspectives on the role of cleaning symbiosis in the possible transmission of fish diseases. Reviews in Fish Biology and Fisheries, 31. pp. 233-251.

Pewan, Shedrach Benjamin, Otto, John Roger, Huerlimann, Roger, Budd, Alyssa Marie, Mwangi, Felista Waithira, Edmunds, Richard Crawford, Holman, Benjamin William Behrens, Henry, Michelle Lauren Elizabeth, Kinobe, Robert Tumwesigye, Adegboye, Oyelola Abdulwasiu, and Malau-Aduli, Aduli Enoch Othniel (2021) Next generation sequencing of single nucleotide polymorphic DNA-markers in selecting for intramuscular fat, fat melting point, omega-3 long-chain polyunsaturated fatty acids and meat eating quality in Tattykeel Australian White MARGRA lamb. Foods, 10 (10). 2288.

Karnaneedi, Shaymaviswanathan, Huerlimann, Roger, Johnston, Elecia B., Nugraha, Roni, Ruethers, Thimo, Taki, Aya C., Kamath, Sandip D., Wade, Nicholas M., Jerry, Dean R., and Lopata, Andreas L. (2021) Novel allergen discovery through comprehensive de novo transcriptomic analyses of five shrimp species. International Journal of Molecular Sciences, 22 (1). 32.

Cooke, Steven J., Bergman, Jordanna N., Madliger, Christine L., Cramp, Rebecca L., Beardall, John, Burness, Gary, Clark, Timothy D., Dantzer, Ben, De La Barrera, Erick, Fangue, Nann A., Franklin, Craig E., Fuller, Andrea, Hawkes, Lucy A., Hultine, Kevin R., Hunt, Kathleen E., Love, Oliver P., MacMillan, Heath A., Mandelman, John W., Mark, Felix C., Martin, Lynn B., Newman, Amy E.M., Nicotra, Adrienne B., Raby, Graham D., Robinson, Sharon A., Ropert-Coudert, Yan, Rummer, Jodie L., Seebacher, Frank, Todgham, Anne E., Tomlinson, Sean, and Chown, Steven (2021) One hundred research questions in conservation physiology for generating actionable evidence to inform conservation policy and practice. Conservation Physiology, 9 (1). coab009.

Valenzuela, Jessica, Bellwood, David, and Morais, Renato (2021) Ontogenetic habitat shifts in fusiliers (Lutjanidae): evidence from Caesio cuning at Lizard Island, Great Barrier Reef. Coral Reefs, 40. pp. 1687-1696.

Shimada, Takahiro, Thums, Michele, Hamann, Mark, Limpus, Colin J., Hays, Graeme C., Fitzsimmons, Nancy N., Wildermann, Natalie E., Duarte, Carlos M., Meekan, Mark G., and UNSPECIFIED (2021) Optimising sample sizes for animal distribution analysis using tracking data. Methods in Ecology and Evolution, 12 (2). pp. 288-297.

Dulvy, Nicholas K., Pacoureau, Nathan, Rigby, Cassandra L., Pollom, Riley A., Jabado, Rima W., Ebert, David A., Finucci, Brittany, Pollock, Caroline M., Cheok, Jessica, Derrick, Danielle H., Herman, Katelyn B., Sherman, C. Samantha, VanderWright, Wade J., Lawson, Julia M., Walls, Rachel H.L., Carlson, John K., Charvet, Patricia, Bineesh, Kinattumkara K., Fernando, Daniel, Ralph, Gina M., Matsushiba, Jay H., Hilton-Taylor, Craig, Fordham, Sonja, and Simpfendorfer, Colin A. (2021) Overfishing drives over one-third of all sharks and rays toward a global extinction crisis. Current Biology, 31 (21). pp. 4773-4787.

Grant, Michael I., White, William, Amepou, Yolarnie, Appleyard, Sharon, Baje, Leontine, Devloo-Delva, Florian, Fuetry, Pierre, Ibana, Dotty, Jogo, Dick, Jogo, Stanley, Kyne, Peter, Mana, Ralph, Mapmani, Nigel, Nagul, Anthony, Roeger, Darcy, Simpfendorfer, Colin, and Chin, Andrew (2021) Papua New Guinea: a potential refuge for threatened Indo–Pacific river sharks and sawfishes. Frontiers in Conservation Science, 2. 719981.

Huertas Martin, Victor, Morais, Renato A., Bonaldo, Roberta M., and Bellwood, David R. (2021) Parrotfish corallivory on stress-tolerant corals in the Anthropocene. PLoS ONE, 16 (9). e0250725.

Hall, April E., Cameron, Darren S., and Kingsford, Mike J. (2021) Partially protected areas as a management tool on inshore reefs. Reviews in Fish Biology and Fisheries, 31. pp. 631-561.

Santaquiteria, Aintzane, Siqueira, Alexandre C., Duarte-Ribeiro, Emanuell, Carnevale, Giorgio, White, William T., Pogonoski, John J., Baldwin, Carole C., Ortí, Guillermo, Arcila, Dahiana, and Ricardo, Betancur R. (2021) Phylogenomics and historical biogeography of seahorses, dragonets, goatfishes, and allies (Teleostei: syngnatharia): assessing factors driving uncertainty in biogeographic inferences. Systematic Biology, 70 (6). pp. 1145-1162.

Siqueira, Alexandre C., Morais, Renato A., Bellwood, David R., and Cowman, Peter F. (2021) Planktivores as trophic drivers of global coral reef fish diversity patterns. Proceedings of the National Academy of Sciences of the United States of America, 118 (9). e2019404118.

Vucko, Matthew J., de Nys, Rocky, and Cole, Andrew J. (2021) Plant growth-promoting properties of extracts produced by fermenting the freshwater macroalga, Oedogonium intermedium. Algal Research, 58. 102435.

Duncan, Emily M., Broderick, Annette C., Critchell, Kay, Galloway, Tamara S., Hamann, Mark, Limpus, Colin J., Lindeque, Penelope K., Santillo, David, Tucker, Anton D., Whiting, Scott, Young, Erina J., and Godley, Brendan J. (2021) Plastic Pollution and Small Juvenile Marine Turtles: A Potential Evolutionary Trap. Frontiers in Marine Science, 8. 699521.

Woodings, Laura N., Murphy, Nicholas P., Liggins, Geoffrey W., Miller, Marcus E., Ballinger, Giles M., Lau, Sally C.Y., and Strugnell, Jan M. (2021) Population genomics of the Eastern Rock Lobster, Sagmariasus verreauxi, during spawning stock recovery from over-exploitation. ICES Journal of Marine Science, 78 (7). pp. 2448-2459.

Vu, Nga T.T., Zenger, Kyall R., Nunes Soares Silva, Catarina N.S., Guppy, Jarrod L., and Jerry, Dean R. (2021) Population structure, genetic connectivity, and signatures of local adaptation of the giant black tiger shrimp (Penaeus monodon) throughout the indo-pacific region. Genome Biology and Evolution, 13 (10). evab214.

Kingsford, Michael J., Schlaefer, Jodie A., and Morrissey, Scott J. (2021) Population structures and levels of connectivity for Scyphozoan and Cubozoan jellyfish. Diversity, 13 (4). 174.

Gervais, Connor R., Huveneers, Charlie, Rummer, Jodie L., and Brown, Culum (2021) Population variation in the thermal response to climate change reveals differing sensitivity in a benthic shark. Global Change Biology, 27 (1). pp. 108-120.

Palacios, Maria del Mar, and McCormick, Mark I. (2021) Positive indirect effects of top-predators on the behaviour and survival of juvenile fishes. Oikos, 130 (2). pp. 219-230.

Barr, Claire E., Hamann, Mark, Shimada, Takahiro, Bell, Ian, Limpus, Colin, and Ferguson, Janine (2021) Post-nesting movements and feeding ground distribution by the hawksbill turtle (Eretmochelys imbricata) from rookeries in the Torres Strait. Wildlife Research, 48 (7). pp. 598-608.

Mukherji, Sushmita, Smart, Jonathan, D’Alberto, Brooke, Baje, Leontine, Chin, Andrew, White, William, and Simpfendorfer, Colin A. (2021) Preliminary age and growth estimates of the blue shark (Prionace glauca) from Papua New Guinea. Environmental Biology of Fishes, 104 (9). pp. 1163-1176.

Kingsford, R.T., Bino, G,, Finlayson, C.M., Falster, D., Fitzsimons, J.A., Gawlik, D.E., Murray, N.J., Grillas, P., Gardner, R.C., Regan, T.J., Roux, D.J., and Thomas, R.F. (2021) Ramsar Wetlands of International Importance–improving conservation outcomes. Frontiers in Environmental Science, 9. 643367.

Vandamme, Sara, Raeymaekers, Joost A.M., Maes, Gregory E., Cottenie, Karl, Calboli, Federico C.F., Diopere, Eveline, and Volckaert, Filip A.M. (2021) Reconciling seascape genetics and fisheries science in three codistributed flatfishes. Evolutionary Applications, 14 (2). pp. 536-552.

Roque, Breanna M., Venegas, Marielena, Kinley, Robert D., de Nys, Rocky, Duarte, Toni L., Yang, Xiang, and Kebreab, Ermias (2021) Red seaweed (Asparagopsis taxiformis) supplementation reduces enteric methane by over 80 percent in beef steers. PLoS ONE, 16 (3). e0247820.

Lowe, Jake R., Payet, Samuel D., Harrison, Hugo B., Hobbs, Jean-Paul A., Hoey, Andrew S., Taylor, Brett M., Sinclair-Taylor, Tane H., and Pratchett, Morgan S. (2021) Regional versus latitudinal variation in the life-history traits and demographic rates of a reef fish, Centropyge bispinosa, in the Coral Sea and Great Barrier Reef Marine Parks, Australia. Journal of Fish Biology, 99 (5). pp. 1602-1612.

McClure, Eva C., Hoey, Andrew S., Sievers, Katie T., Abesamis, Rene A., and Russ, Garry R. (2021) Relative influence of environmental factors and fishing on coral reef fish assemblages. Conservation Biology, 35 (3). pp. 976-990.

Dawson, Amanda L., Santana, Marina F.M., Miller, Michaela E., and Kroon, Frederieke J. (2021) Relevance and reliability of evidence for microplastic contamination in seafood: A critical review using Australian consumption patterns as a case study. Environmental Pollution, 276. 116684.

Queiroz, Nuno, Humphries, Nicolas E., Couto, Ana, Vedor, Marisa, da Costa, Ivo, Sequeira, Ana M.M., Mucientes, Gonzalo, Santos, António M., Abascal, Francisco J., Abercrombie, Debra L., Abrantes, Katya, Acuña-Marrero, David, Afonso, André S., Afonso, Pedro, Anders, Darrell, Araujo, Gonzalo, Arauz, Randall, Bach, Pascal, Barnett, Adam, Bernal, Diego, Berumen, Michael L., Bessudo Lion, Sandra, Bezerra, Natalia P.A., Blaison, Antonin V., Block, Barbara A., Bond, Mark E., Bonfil, Ramon, Bradford, Russell W., Braun, Camrin D., Brooks, Edward J., Brooks, Annabelle, Brown, Judith, Bruce, Barry D., Byrne, Michael E., Campana, Steven E., Carlisle, Aaron B., Chapman, Demian D., Chapple, Taylor K., Chisholm, John, Clarke, Christopher R., Clua, Eric G., Cochran, Jesse E.M., Crochelet, Estelle C., Dagorn, Laurent, Daly, Ryan, Cortés, Daniel Devia, Doyle, Thomas K., Drew, Michael, Duffy, Clinton A.J., Erikson, Thor, Espinoza, Eduardo, Ferreira, Luciana C., Ferretti, Francesco, Filmalter, John D., Fischer, G. Chris, Fitzpatrick, Richard, Fontes, Jorge, Forget, Fabien, Fowler, Mark, Francis, Malcolm P., Gallagher, Austin J., Gennari, Enrico, Goldsworthy, Simon D., Gollock, Matthew J., Green, Jonathan R., Gustafson, Johan A., Guttridge, Tristan L., Guzman, Hector M., Hammerschlag, Neil, Harman, Luke, Hazin, Fábio H.V., Heard, Matthew, Hearn, Alex R., Holdsworth, John C., Holmes, Bonnie J., Howey, Lucy A., Hoyos, Mauricio, Hueter, Robert E., Hussey, Nigel E., Huveneers, Charlie, Irion, Dylan T., Jacoby, David M.P., Jewell, Oliver J.D., Johnson, Ryan, Jordan, Lance K.B., Joyce, Warren, Keating Daly, Clare A., Ketchum, James T., Klimley, A. Peter, Kock, Alison A., Koen, Pieter, Ladino, Felipe, Lana, Fernanda O., Lea, James S.E., Llewellyn, Fiona, Lyon, Warrick S., MacDonnell, Anna, Macena, Bruno C.L., Marshall, Heather, McAllister, Jaime D., Meÿer, Michael A., Morris, John J., Nelson, Emily R., Papastamatiou, Yannis P., Peñaherrera-Palma, Cesar, Pierce, Simon J., Quintero, Lina Maria, Richardson, Andrew J., Rogers, Paul J., Rohner, Christoph A., Rowat, David R. L., Samoilys, Melita, Semmens, Jayson M., Sheaves, Marcus, Shillinger, George, Shivji, Mahmood, Singh, Sarika, Skomal, Gregory B., Smale, Malcolm J., Snyders, Laurenne B., Soler, German, Soria, Marc, Stehfest, Kilian M., Thorrold, Simon R., Tolotti, Mariana T., Towner, Alison, Travassos, Paulo, Tyminski, John P., Vandeperre, Frederic, Vaudo, Jeremy J., Watanabe, Yuuki Y., Weber, Sam B., Wetherbee, Bradley M., White, Timothy D., Williams, Sean, Zárate, Patricia M., Harcourt, Robert, Hays, Graeme C., Meekan, Mark G., Thums, Michele, Irigoien, Xabier, Eguiluz, Victor M., Duarte, Carlos M., Sousa, Lara L., Simpson, Samantha J., Southall, Emily J., and Sims, David W. (2021) Reply to: Shark mortality cannot be assessed by fishery overlap alone. Nature, 595 (7866). E8-E16.

Queiroz, Nuno, Humphries, Nicolas E., Couto, Ana, Vedor, Marisa, da Costa, Ivo, Sequeira, Ana M.M., Mucientes, Gonzalo, Santos, António M., Abascal, Francisco J., Abercrombie, Debra L., Abrantes, Katya, Acuña-Marrero, David, Afonso, André S., Afonso, Pedro, Anders, Darrell, Araujo, Gonzalo, Arauz, Randall, Bach, Pascal, Barnett, Adam, Bernal, Diego, Berumen, Michael L., Bessudo Lion, Sandra, Bezerra, Natalia P.A., Blaison, Antonin V., Block, Barbara A., Bond, Mark E., Bonfil, Ramon, Braun, Camrin D., Brooks, Edward J., Brooks, Annabelle, Brown, Judith, Byrne, Michael E., Campana, Steven E., Carlisle, Aaron B., Chapman, Demian D., Chapple, Taylor K., Chisholm, John, Clarke, Christopher R., Clua, Eric G., Cochran, Jesse E.M., Crochelet, Estelle C., Dagorn, Laurent, Daly, Ryan, Cortés, Daniel Devia, Doyle, Thomas K., Drew, Michael, Duffy, Clinton A.J., Erikson, Thor, Espinoza, Eduardo, Ferreira, Luciana C., Ferretti, Francesco, Filmalter, John D., Fischer, G. Chris, Fitzpatrick, Richard, Fontes, Jorge, Forget, Fabien, Fowler, Mark, Francis, Malcolm P., Gallagher, Austin J., Gennari, Enrico, Goldsworthy, Simon D., Gollock, Matthew J., Green, Jonathan R., Gustafson, Johan A., Guttridge, Tristan L., Guzman, Hector M., Hammerschlag, Neil, Harman, Luke, Hazin, Fábio H.V., Heard, Matthew, Hearn, Alex R., Holdsworth, John C., Holmes, Bonnie J., Howey, Lucy A., Hoyos, Mauricio, Hueter, Robert E., Hussey, Nigel E., Huveneers, Charlie, Irion, Dylan T., Jacoby, David M.P., Jewell, Oliver J.D., Johnson, Ryan, Jordan, Lance K.B., Joyce, Warren, Keating Daly, Clare A., Ketchum, James T., Klimley, A. Peter, Kock, Alison A., Koen, Pieter, Ladino, Felipe, Lana, Fernanda O., Lea, James S.E., Llewellyn, Fiona, Lyon, Warrick S., MacDonnell, Anna, Macena, Bruno C.L., Marshall, Heather, McAllister, Jaime D., Meÿer, Michael A., Morris, John J., Nelson, Emily R., Papastamatiou, Yannis P., Peñaherrera-Palma, Cesar, Pierce, Simon J., Poisson, Francois, Quintero, Lina Maria, Richardson, Andrew J., Rogers, Paul J., Rohner, Christoph A., Rowat, David R. L., Samoilys, Melita, Jayson M., Semmens, Sheaves, Marcus, Shillinger, George, Shivji, Mahmood, Singh, Sarika, Skomal, Gregory B., Smale, Malcolm J., Snyders, Laurenne B., Soler, German, Soria, Marc, Stehfest, Kilian M., Thorrold, Simon R., Tolotti, Mariana T., Towner, Alison, Travassos, Paulo, Tyminski, John P., Vandeperre, Frederic, Vaudo, Jeremy J., Watanabe, Yuuki Y., Weber, Sam B., Wetherbee, Bradley M., White, Timothy D., Williams, Sean, Zárate, Patricia M., Harcourt, Robert, Hays, Graeme C., Meekan, Mark G., Thums, Michele, Irigoien, Xabier, Eguiluz, Victor M., Duarte, Carlos M., Sousa, Lara L., Simpson, Samantha J., Southall, Emily J., and Sims, David W. (2021) Reply to: caution over the use of ecological big data for conservation. Nature, 595 (7866). E20-E28.

Sheaves, M., Waltham, N.J., Benham, C., Bradley, M., Mattone, C., Diedrich, A., Sheaves, J., Sheaves, A., Hernandez, S., Dale, P., Banhalmi-Zakar, Z., and Newlands, M. (2021) Restoration of marine ecosystems: understanding possible futures for optimal outcomes. Science of the Total Environment, 796. 148845.

Pattiselanno, Freddy, and Krockenberger, Andrew (2021) Road development and Indigenous hunting in Tanah Papua: connecting the facts for future wildlife conservation agendas. Forest and Society, 5 (1). pp. 181-189.

Massault, C., Jones, D.B., Zenger, K., Strugnell, J.M., Barnard, R., and Jerry, D.R. (2021) A SNP parentage assignment panel for the silver lipped pearl oyster (Pinctada maxima). Aquaculture Reports, 20. 100687.

Domingos, Jose A., Shen, Xueyan, Terence, Celestine, Senapin, Saengchan, Dong, Ha Thanh, Tan, Marie R., Gibson-Kueh, Susan, and Jerry, Dean R. (2021) Scale Drop Disease Virus (SDDV) and Lates calcarifer Herpes Virus (LCHV) coinfection downregulate immune-relevant pathways and cause splenic and kidney necrosis in barramundi under commercial farming conditions. Frontiers in Genetics, 12. 666897.

Nicholson, Emily, Watermeyer, Kate, Rowland, Jessica A., Sato, Chloe F., Stevenson, Simone L., Andrade, Angela, Brooks, Thomas M., Burgess, Neil D., Cheng, Su Ting, Grantham, Hedley S., Hill, Samantha, Keith, David A., Maron, Martine, Metzke, Daniel, Murray, Nicholas J., Nelson, Cara R., Obura, David, Plumptre, Andrew, Skowno, Andrew, and Watson, James E.M. (2021) Scientific foundations for an ecosystem goal, milestones and indicators for the post-2020 global biodiversity framework. Nature Ecology & Evolution, 5 (10). pp. 1338-1349.

Heinrich, Dennis, Dhellemmes, Félicie, Guttridge, Tristan L., Smukall, Matthew, Brown, Culum, Rummer, Jodie, Gruber, Samuel, and Huveneers, Charlie (2021) Short-term impacts of daily feeding on the residency, distribution and energy expenditure of sharks. Animal Behaviour, 172. pp. 55-71.

Marhoefer, Shelby R., Zenger, Kyall R., Strugnell, Jan M., Logan, Murray, van Oppen, Madeleine J.H., Kenkel, Carly D., and Bay, Line K. (2021) Signatures of Adaptation and Acclimatization to Reef Flat and Slope Habitats in the Coral Pocillopora damicornis. Frontiers in Marine Science, 8. 704709.

Jurriaans, Saskia, Hoogenboom, Mia O., and Ferrier-Pages, Christine (2021) Similar thermal breadth of two temperate coral species from the Mediterranean Sea and two tropical coral species from the Great Barrier Reef. Coral Reefs, 40 (4). pp. 1281-1295.

Morais Araujo, Renato A., Siqueira Correa, Alexandre C., Smallhorn-West, Patrick F., and Bellwood, David R. (2021) Spatial subsidies drive sweet spots of tropical marine biomass production. PLoS Biology, 19 (11). e3001435.

Buddle, Alice L., Van Dyke, James U., Thompson, Michael B., Simpfendorfer, Colin A., Murphy, Christopher R., Dowland, Samson N., and Whittington, Camilla M. (2021) Structure of the paraplacenta and the yolk sac placenta of the viviparous Australian sharpnose shark, Rhizoprionodon taylori. Placenta, 108. pp. 11-22.

Dutra, Leo X.C., Haywood, Michael D.E., Singh, Shubha, Ferreira, Marta, Johnson, Johanna E., Veitayaki, Joeli, Kininmonth, Stuart, Morris, Cherrie W., and Piovano, Susanna (2021) Synergies between local and climate-driven impacts on coral reefs in the Tropical Pacific: A review of issues and adaptation opportunities. Marine Pollution Bulletin, 164. 111922.

Madden, Danielle E., Webb, Jessica R., Steinig, Eike J., Currie, Bart J., Price, Erin P., and Sarovich, Derek S. (2021) Taking the next-gen step: Comprehensive antimicrobial resistance detection from Burkholderia pseudomallei. EBioMedicine, 63. 103152.

Nørskov, Natalja P., Bruhn, Annette, Cole, Andrew, and Nielsen, Mette Olaf (2021) Targeted and untargeted metabolic profiling to discover bioactive compounds in seaweeds and hemp using gas and liquid chromatography-mass spectrometry. Metabolites, 11 (5). 259.

Thompson, Cassandra A., Hoey, Andrew S., Montanari, Stefano R., Messmer, Vanessa, Doll, Peter C., and Pratchett, Morgan S. (2021) Territoriality and condition of chevron butterflyfish (Chaetodon trifascialis) with varying coral cover on the great barrier reef, Australia. Environmental Biology of Fishes, 104. pp. 53-69.

O'Brien, Paul A., Andreakis, Nikolaos, Tan, Shangjin, Miller, David, Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2021) Testing cophylogeny between coral reef invertebrates and their bacterial and archaeal symbionts. Molecular Ecology, 30 (15). pp. 3768-3782.

Drane, Kezia, Huerlimann, Roger, Power, Michelle, Whelan, Anna, Ariel, Ellen, Sheehan, Madoc, and Kinobe, Robert (2021) Testudines as sentinels for monitoring the dissemination of antibiotic resistance in marine environments: an integrative review. Antibiotics, 10 (7). 775.

LaMonica, Lauren E., Fox, Rebecca J., and Donelson, Jennifer M. (2021) Thermal sensitivity of juvenile rabbitfishes Siganus doliatus and S. lineatus (Siganidae): a key role for habitat? Coral Reefs, 40. pp. 1307-1320.

Martins, A.P.B., Heupel, M.R., Bierwagen, S.L., Chin, A., and Simpfendorfer, C.A. (2021) Tidal-diel patterns of movement, activity and habitat use by juvenile mangrove whiprays using towed-float GPS telemetry. Marine and Freshwater Research, 72. pp. 534-541.

Smallhorn-West, Patrick F., Gordon, Sophie E., Dempsey, Alexandra C., Purkis, Sam J., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Southgate, Paul C., Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2021) Tongan socio-environmental spatial layers for marine ecosystem management. Pacific Conservation Biology, 27 (1). pp. 86-92.

Chen, Jun Yu, and Zeng, Chaoshu (2021) Transition to Artemia feeding phase for orchid dottyback Pseudochromis fridmani larvae: establishing suitable prey shift time and strategy. Aquaculture, 545. 737180.

MacKeracher, Tracy, Mizrahi, Me'ira, Bergseth, Brock, Chit Maung, Khin May, Khine, Zin Lin, Phyu, Ei Thal, Simpfendorfer, Colin A., and Diedrich, Amy (2021) Understanding non-compliance in small-scale fisheries: shark fishing in Myanmar's Myeik Archipelago. Ambio, 50. pp. 572-585.

Drane, Kezia, Huerlimann, Roger, Power, Michelle, Ariel, Ellen, Sheehan, Madoc, and Kinobe, Robert (2021) Using Green sea turtles (Chelonia mydas) as essential bio-indicators for monitoring antibiotic resistance in marine environments worldwide: a critical appraisal. FASEB Journal, 35 (S1). 03303-03303.

Marc, Adrien F., Guppy, Jarrod L., Bauer, Paige, Mulvey, Peter, Jerry, Dean R., and Paris, Damien B.B.P. (2021) Validation of advanced tools to evaluate sperm function in barramundi (Lates calcarifer). Aquaculture, 531. 735802.

Bolte, Brett, Goldsbury, Julie, Huerlimann, Roger, Jerry, Dean, and Kingsford, Mike (2021) Validation of eDNA as a viable method of detection for dangerous cubozoan jellyfish. Environmental DNA, 3 (4). pp. 769-779.

Quigley, Kate M., Marzonie, Magena, Ramsby, Blake, Abrego, David, Milton, Grant, van Oppen, Madeleine J.H., and Bay, Line K. (2021) Variability in fitness trade-offs amongst coral juveniles with mixed genetic backgrounds held in the wild. Frontiers in Marine Science, 8. 636177.

Geoghegan, Jemma L., Di Giallonardo, Francesca, Wille, Michelle, Ortiz-Baez, Ayda Susana, Costa, Vincenzo A., Ghaly, Timothy, Mifsud, Jonathon C.O., Turnbull, Olivia M.H., Bellwood, David R., Williamson, Jane E., and Holmes, Edward . (2021) Virome composition in marine fish revealed by meta-transcriptomics. Virus Evolution, 7 (1). veab005.

Hernandez, Stephanie, Benham, Claudia, Miller, Rachel L., Sheaves, Marcus, and Duce, Stephanie (2021) What drives modern protected area establishment in Australia? Conservation Science and Practice, 3 (10). e501.

Ingram, Daniel J., Coad, Lauren, Milner-Gulland, E.J., Parry, Luke, Wilkie, David, Bakarr, Mohamed I., Benítez-López, Ana, Bennett, Elizabeth L., Bodmer, Richard, Cowlishaw, Guy, El Bizri, Hani R., Eves, Heather E., Fa, Julia E., Golden, Christopher D., Iponga, Donald Midoko, Minh, Nguyen Vaan, Morcatty, Thais Q., Mwinyihali, Robert, Nasi, Robert, Nijman, Vincent, Ntiamoa-Baidu, Yaa, Pattiselanno, Freddy, Peres, Carlos A., Rao, Madhu, Robinson, John G., Rowcliffe, J. Marcus, Stafford, Ciara, Supuma, Miriam, Tarla, Francis Nchembi, Van Vliet, Nathalie, Wieland, Michelle, and Abernethy, Katharine (2021) Wild meat is still on the menu: progress in wild meat research, policy, and practice from 2002 to 2020. Annual Review of Environment and Resources, 46. pp. 221-254.

Roelfsema, Chris M., Lyons, Mitchell, Murray, Nicholas, Kovacs, Eva M., Kennedy, Emma, Markey, Kathryn, Borrego-Acevedo, Rodney, Ordoñez Alvarez, Alexandra, Say, Chantel, Tudman, Paul, Roe, Meredith, Wolff, Jeremy, Traganos, Dimosthenis, Asner, Gregory P., Bambic, Brianna, Free, Brian, Fox, Helen E., Lieb, Zoe, and Phinn, Stuart R. (2021) Workflow for the generation of expert-derived training and validation data: a view to global scale habitat mapping. Frontiers in Marine Science, 8. 643381.

Liu, A., Mazumder, D., Pirozzi, I., Sammut, J., and Booth, M. (2021) The effect of dietary choline and water temperature on the contribution of raw materials to the muscle tissue of juvenile yellowtail kingfish (Seriola lalandi): An investigation using a stable isotope mixing model. Animal Feed Science and Technology, 280. 115087.

Chen, Jun Yu, and Zeng, Chaoshu (2021) The effects of live prey and greenwater on the early larval rearing of orchid dottyback Pseudochromis fridmani. Aquaculture, 543. 737008.

Bellwood, David R., Bellwood, Orpha, and Ilming, Thomas (2021) The evolution of black and white or fleur-de-lis high comb morions. Arms and Armour, 18 (2). pp. 163-183.

Pie, Marcio R., Divieso, Raquel, Caron, Fernanda S., Siqueira Correa, Alexandre C., Barneche, Diego R., and Luiz, Osmar J. (2021) The evolution of latitudinal ranges in reef-associated fishes: heritability, limits and inverse Rapoport's rule. Journal of Biogeography, 48 (9). pp. 2121-2132.

Gregoire, Marilaure, Garcon, Veronique, Garcia, Hernan, Breitburg, Denise, Isensee, Kirsten, Oschlies, Andreas, Telszewski, Maciej, Barth, Alexander, Bittig, Henry C., Carstensen, Jacob, Carval, Thierry, Chai, Fei, Chavez, Francisco, Conley, Daniel, Coppola, Laurent, Crowe, Sean, Currie, Kim, Dai, Minhan, Deflandre, Bruno, Dewitte, Boris, Diaz, Robert, Garcia-Robledo, Emilio, Gilbert, Denis, Giorgetti, Alessandra, Glud, Ronnie, Gutierrez, Dimitri, Hosoda, Shigeki, Ishii, Masao, Jacinto, Gil, Langdon, Chris, Lauvset, Siv K., Levin, Lisa A., Limburg, Karin E., Mehrtens, Hela, Montes, Ivonne, Naqvi, Wajih, Paulmier, Aurelien, Pfeil, Benjamin, Pitcher, Grant, Pouliquen, Sylvie, Rabalais, Nancy, Rabouille, Christophe, Recape, Virginie, Roman, Michael, Rose, Kenneth, Rudnick, Daniel, Rummer, Jodie, Schmechtig, Catherine, Schmidtko, Sunke, Seibel, Brad, Slomp, Caroline, Sumalia, U. Rashid, Tanhua, Toste, Thierry, Virginie, Uchida, Hiroshi, Wanninkhof, Rik, and Yasuhara, Moriaki (2021) A global ocean oxygen database and atlas for assessing and predicting deoxygenation and ocean health in the open and coastal ocean. Frontiers in Marine Science, 8. 724913.

Borland, Hayden P., Gilby, Ben L., Henderson, Christopher J., Leon, Javier X., Schlacher, Thomas A., Connolly, Rod M., Pittman, Simon J., Sheaves, Marcus, and Olds, Andrew D. (2021) The influence of seafloor terrain on fish and fisheries: a global synthesis. Fish and Fisheries, 22 (4). pp. 707-734.

Booth, Mark A., and Pirozzi, Igor (2021) The interaction of feeding regime and dietary specification on growth and nutrient utilisation in Yellowtail Kingfish Seriola lalandi. Aquaculture, 544. 737094.

Liu, Angela, Pirozzi, Igor, Codabaccus, Basseer M., Sammut, Jesmond, and Booth, Mark A. (2021) The interactive effect of dietary choline and water temperature on the liver lipid composition, histology, and plasma biochemistry of juvenile yellowtail kingfish (Seriola lalandi). Aquaculture, 531. 735893.

Schwieterman, Gail, Rummer, Jodie L., Bouyoucos, Ian, Bushnell, Peter G., and Brill, Richard W. (2021) A lack of red blood cell swelling in five elasmobranch fishes following air exposure and exhaustive exercise. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 258. 110978.

Huveneers, Charlie, Jaine, Fabrice R.A., Barnett, Adam, Butcher, Paul A., Clarke, Thomas M., Currey-Randall, Leanne M., Dwyer, Ross G., Ferreira, Luciana C., Gleiss, Adrian C., Hoenner, Xavier, Ierodiaconou, Daniel, Lédée, Elodie J.I., Meekan, Mark G., Pederson, Hugh, Rizzari, Justin R., van Ruth, Paul D., Semmens, Jayson M., Taylor, Matthew D., Udyawer, Vinay, Walsh, Peter, Heupel, Michelle R., and Harcourt, Robert (2021) The power of national acoustic tracking networks to assess the impacts of human activity on marine organisms during the COVID-19 pandemic. Biological Conservation, 256. 108995.

Mihalitsis, Michalis, Hemingson, Christopher R., Goatley, Christopher H.R., and Bellwood, David R. (2021) The role of fishes as food: a functional perspective on predator–prey interactions. Functional Ecology, 35 (5). pp. 1109-1119.

Madliger, Christine L., Franklin, Craig E., Chown, Steven L., Fuller, Andrea, Hultine, Kevin R., Costantini, David, Hopkins, William A., Peck, Myron A., Rummer, Jodie L., Sack, Lawren, Willis, Craig K.R., and Cooke, Steven J. (2021) The second warning to humanity: contributions and solutions from conservation physiology. Conservation Physiology, 9 (1). coab038.

Candebat, Caroline L., Booth, Mark A., and Pirozzi, Igor (2021) The sulfur amino acid requirements of juvenile Yellowtail Kingfish (Seriola lalandi). Aquaculture, 534. 736234.

Si, Yali, Xu, Fei, Wei, Jie, Zhang, Lin, Murray, Nicholas, Yang, Rui, Ma, Keping, and Gong, Peng (2021) A systematic network-based migratory bird monitoring and protection system is needed in China. Science Bulletin, 66 (10). pp. 955-957.

Devlin, Michelle J., Lyons, Brett P., Johnson, Johanna, and Hills, Jeremy (2021) The tropical Pacific Oceanscape: Current issues, solutions and future possibilities. Marine Pollution Bulletin, 166. 112181. pp. 1-10.

Templeman, Michelle A., McKenzie, Madeline R., and Kingsford, Michael J. (2021) The utility of jellyfish as marine biomonitors. Marine Pollution Bulletin, 173. 113056.

Whitelaw, Brooke L., Cooke, Ira R., Finn, Julian, da Fonseca, Rute R., Ritschard, Elena A., Gilbert, M. T. P., Simakov, Oleg, and Strugnell, Jan M. (2020) Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss. GigaScience, 9 (11). giaa120.

Shiel, Brett P., Cooke, Ira R., Hall, Nathan E., Robinson, Nicholas A., and Strugnell, Jan M. (2020) Gene expression differences between abalone that are susceptible and resilient to a simulated heat wave event. Aquaculture, 526. 735317.

Engelbrecht, T.M., Kock, A.A., O'Riain, M.J., Mann, B.Q., Dunlop, S.W., and Barnett, A. (2020) Movements and growth rates of the broadnose sevengill shark Notorynchus cepedianus in southern Africa: results from a long-term cooperative tagging programme. African Journal of Marine Science, 42 (3). pp. 247-259.

Fuller, Zachary L., Mocellin, Veronique J. L., Morris, Luke A., Cantin, Neal, Shepherd, Jihanne, Sarre, Luke, Peng, Julie, Liao, Yi, Pickrell, Joseph, Andolfatto, Peter, Matz, Mikhail, Bay, Line K., and Przeworski, Molly (2020) Population genetics of the coral Acropora millepora: toward genomic prediction of bleaching. Science, 369 (6501). eaba4674.

Worthington, Thomas A., Andradi-Brown, Dominic A., Bhargava, Radhika, Buelow, Christina, Bunting, Pete, Duncan, Clare, Fatoyinbo, Lola, Friess, Daniel A., Goldberg, Liza, Hilarides, Lammert, Lagomasino, David, Landis, Emily, Longley-Wood, Kate, Lovelock, Catherine E., Murray, Nicholas J., Narayan, Siddharth, Rosenqvist, Ake, Sievers, Michael, Simard, Marc, Thomas, Nathan, van Eijk, Pieter, Zganjar, Chris, and Spalding, Mark D. (2020) Harnessing big data to support the conservation and rehabilitation of mangrove forests globally. One Earth, 2 (5). pp. 429-443.

Gacesa, Ranko, Hung, Julia Yun-hsuan, Bourne, David G., and Long, Paul F. (2020) Horizontal transfer of a natterin-like toxin encoding gene within the holobiont of the reef building coral Acropora digitifera (Cnidaria:Anthozoa: Scleractinia) and across multiple animal linages. Journal of Venom Research, 10. pp. 7-12.

Wei, Yujie, Lin, Dongdong, Xu, Zhanning, Gao, Xiaoman, Zeng, Chaoshu, and Ye, Haihui (2020) A possible role of crustacean cardioactive peptide in regulating immune response in hepatopancreas of mud crab. Frontiers in Immunology, 11. 711.

Da Fonseca, Rute R., Couto, Alvarina, Machado, Andre M., Brejova, Brona, Albertin, Carolin B., Silva, Filipe, Gardner, Paul, Baril, Tobias, Hayward, Alex, Campos, Alexandre, Ribeiro, Ângela M., Barrio-Hernandez, Inigo, Hoving, Henk-Jan, Tafur-Jimenez, Ricardo, Chu, Chong, Frazão, Barbara, Petersen, Bent, Peñaloza, Fernando, Musacchia, Francesco, Alexander, Graham C., Osório, Hugo, Winkelmann, Inger, Simakov, Oleg, Rasmussen, Simon, Rahman, M. Ziaur, Pisani, Davide, Vinther, Jakob, Jarvis, Erich, Zhang, Guojie, Strugnell, Jan M., Castro, L. Filipe C., Fedrigo, Olivier, Patricio, Mateus, Li, Qiye, Rocha, Sara, Antunes, Agostinho, Wu, Yufeng, Ma, Bin, Sanges, Remo, Vinar, Tomas, Blagoev, Blagoy, Sicheritz-Ponten, Thomas, Nielsen, Rasmus, and Gilbert, M Thomas P. (2020) A draft genome sequence of the elusive giant squid, Architeuthis dux. GigaScience, 9 (1). giz152.

Tebbett, Sterling B., Streit, Robert P., and Bellwood, David R. (2020) A 3D perspective on sediment accumulation in algal turfs: implications of coral reef flattening. Journal of Ecology, 108 (1). pp. 70-80.

Tebbett, Sterling B., Goatley, Christopher H. R., Streit, Robert P., and Bellwood, David R. (2020) Algal turf sediments limit the spatial extent of function delivery on coral reefs. Science of the Total Environment, 734. 139422.

Dam, Chinh Thi My, Booth, Mark, Pirozzi, Igor, Salini, Michael, Smullen, Richard, Ventura, Tomer, and Elizur, Abigail (2020) Alternative feed raw materials modulate intestinal microbiota and its relationship with digestibility in Yellowtail Kingfish Seriola lalandi. Fishes, 5 (2). 14.

Grantham, H.S., Duncan, A., Evans, T., Jones, K.R., Beyer, H.L., Schuster, R., Walston, J., Ray, J.C., Robinson, J.G., Callow, M., Clement, T., Costa, H.M., DeGemmis, A., Elsen, P.R., Ervin, J., Franco, P., Goldman, E., Goetz, S., Hansen, A., Hofsvang, E., Jantz, P., Jupiter, S., Kang, A., Langhammer, P., Laurance, W.F., Lieberman, S., Linkie, M., Malhi, Y., Maxwell, S., Mendez, M., Mittermeier, R., Murray, N.J., Possingham, H., Radachowsky, J., Saatchi, S., Samper, C., Silverman, J., Shapiro, A., Strassburg, B., Stevens, T., Stokes, E., Taylor, R., Tear, T., Tizard, R., Venter, O., and Visconti, P. (2020) Anthropogenic modification of forests means only 40% of remaining forests have high ecosystem integrity. Nature Communications, 11. 5978.

Quigley, K.M., Randall, C.J., van Oppen, M.J.H., and Bay, L.K. (2020) Assessing the role of historical temperature regime and algal symbionts on the heat tolerance of coral juveniles. Biology Open, 9. bio047316.

Priyambodo, Bayu, Jones, Clive M., and Sammut, Jesmond (2020) Assessment of the lobster puerulus (Panulirus homarus and Panulirus ornatus, Decapoda: Palinuridae) resource of Indonesia and its potential for sustainable harvest for aquaculture. Aquaculture, 528. 735563.

Bourillon, Bastien, Acou, Anthony, Trancart, Thomas, Belpaire, Claude, Covaci, Adrian, Bustamante, Paco, Faliex, Elisabeth, Amilhat, Elsa, Malarvannan, Govindan, Virag, Laure, Aarestrup, Kim, Bervoets, Lieven, Boisneau, Catherine, Boulenger, Clarisse, Gargan, Paddy, Becerra-Jurado, Gustavo, Lobon-Cervia, Javier, Maes, Gregory E., Pedersen, Michael Ingemann, Poole, Russell, Sjoberg, Niklas, Wickstrom, Hakan, Walker, Alan, Righton, David, and Feunteun, Eric (2020) Assessment of the quality of European silver eels and tentative approach to trace the origin of contaminants - a European overview. Science of the Total Environment, 743. 140675.

Konovalov, Dmitry A., Swinhoe, Natalie, Efremova, Dina B., Birtles, R. Alastair, Kusetic, Martha, Hillcoat, Suzanne, Curnock, Matthew I., Williams, Genevieve, and Sheaves, Marcus (2020) Automatic sorting of Dwarf Minke Whale underwater images. Information, 11 (4). 200.

Kalidin, Bhavnah Komul, Mattone, Carlo, and Sheaves, Marcus (2020) Barriers to effective monitoring and evaluation of small-scale fisheries in small island developing states: an example from Mauritius. Marine Policy, 118. 103845.

Schlaefer, Jodie A., Wolanski, Eric, Yadav, Shreya, and Kingsford, Michael J. (2020) Behavioural maintenance of highly localised jellyfish (Copula sivickisi, class Cubozoa) populations. Marine Biology, 167. 40.

Laubenstein, Taryn D., Jarrold, Michael D., Rummer, Jodie L., and Munday, Philip L. (2020) Beneficial effects of diel CO₂ cycles on reef fish metabolic performance are diminished under elevated temperature. Science of the Total Environment, 735. 139084.

Miller, Michaela E., Hamann, Mark, and Kroon, Frederieke J. (2020) Bioaccumulation and biomagnification of microplastics in marine organisms: a review and meta-analysis of current data. PLoS ONE, 15 (10). e0240792.

Barton, Jonathan A., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2020) Biological controls to manage Acropora-eating flatworms in coral aquaculture. Aquaculture Environment Interactions, 12. pp. 61-66.

Smallhorn-West, Patrick, Gordon, Sophie, Stone, Karen, Ceccarelli, Daniela, Malimali, Siola'a, Halafihi, Tu'ikolongahau, Wyatt, Mathew, Bridge, Tom, Pressey, Robert, and Jones, Geoffrey (2020) Biophysical and anthropogenic influences on the status of Tonga's coral reefs and reef fish fishery. PLoS One, 15 (11). e0241146.

Velu, Chinnathambi, Cires, Samuel, Brinkman, Diane L., and Heimann, Kirsten (2020) Bioproduct potential of outdoor cultures of Tolypothrix sp.: effect of carbon dioxide and metal-rich wastewater. Frontiers in Bioengineering and Biotechnology, 8. 51.

Sambrook, Katie, Bonin, Mary C., Bradley, Michael, Cumming, Graeme S., Duce, Stephanie, Andréfouët, Serge, and Hoey, Andrew S. (2020) Broadening our horizons: seascape use by coral reef-associated fishes in Kavieng, Papua New Guinea, is common and diverse. Coral Reefs, 39. pp. 1187-1197.

Trujillo-González, A., Becker, J.A., Huerlimann, R., Saunders, R.J., and Hutson, K.S. (2020) Can environmental DNA be used for aquatic biosecurity in the aquarium fish trade? Biological Invasions, 22. pp. 1011-1025.

Villacorta Rath, Cecilia, Adekunle, Adeshina I., Edmunds, Richard C., Strugnell, Jan M., Schwarzkopf, Lin, and Burrows, Damien (2020) Can environmental DNA be used to detect first arrivals of the cane toad, Rhinella marina, into novel locations? Environmental DNA, 2 (4). pp. 635-646.

Smart, Jonathan J., White, William T., Baje, Leontine, Chin, Andrew, D'Alberto, Brooke M., Grant, Michael I., Mukherji, Sushmita, and Simpfendorfer, Colin A. (2020) Can multi-species shark longline fisheries be managed sustainably using size limits? Theoretically, yes. Realistically, no. Journal of Applied Ecology, 57 (9). pp. 1847-1860.

Anderson, R Charles, Herrera, Miguel, Ilangakoon, Anoukchika D., Koya, K.M., Moazzam, M., Mustika, Putu L., and Sutaria, Dipani N. (2020) Cetacean bycatch in Indian Ocean tuna gillnet fisheries. Endangered Species Research, 41. pp. 39-53.

Panicker, Divya, Sutaria, Dipani, Kumar, Ajith, and Stafford, Kathleen M. (2020) Cetacean distribution and diversity in Lakshadweep waters, India, using a platform of opportunity: October 2015 to April 2016. Aquatic Mammals, 46 (1). pp. 80-92.

Gainsford, A., Jones, G.P., Gardner, M.G., and van Herwerden, L. (2020) Characterisation and cross-amplification of 42 microsatellite markers in two Amphiprion species (Pomacentridae) and a natural hybrid anemonefish to inform genetic structure within a hybrid zone. Molecular Biology Reports, 47 (2). pp. 1521-1525.

Cantalice, Kleyton Magno, Alvarado-Ortega, Jesús, and Bellwood, David Roy (2020) †Chaychanus gonzalezorum gen. et sp. nov.: A damselfish fossil (Percomorphaceae; Pomacentridae), from the Early Paleocene outcrop of Chiapas, Southeastern Mexico. Journal of South American Earth Sciences, 98. 102322.

Araujo, Gonzalo, Legaspi, Christine, Matthews, Kinsey, Ponzo, Alessandro, Chin, Andrew, and Manjaji-Matsumoto, B. Mabel (2020) Citizen science sheds light on the cryptic ornate eagle ray Aetomylaeus vespertilio. Aquatic Conservation, 30 (10). pp. 2012-2018.

Quigley, Kate M., Alvarez Roa, Carlos, Torda, Greg, Bourne, David G., and Willis, Bette L. (2020) Co-dynamics of Symbiodiniaceae and bacterial populations during the first year of symbiosis with Acropora tenuis juveniles. MicrobiologyOpen, 9 (2). e959.

Smallhorn-West, Patrick F., Stone, Karen, Ceccarelli, Daniela M., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13. e12755.

Johnson, Johanna E., Hooper, Eryn, and Welch, David J. (2020) Community marine monitoring toolkit: a tool developed in the Pacific to inform community-based marine resource management. Marine Pollution Bulletin, 159. 111498.

Basel, Britt, Goby, Gillian, and Johnson, Johanna (2020) Community-based adaptation to climate change in villages of Western Province, Solomon Islands. Marine Pollution Bulletin, 156. 111266.

Payet, Samuel D., Lowe, Jake R., Mapstone, Bruce D., Pratchett, Morgan S., Sinclair-Taylor, Tane H., Taylor, Brett M., Waldie, Peter A., and Harrison, Hugo B. (2020) Comparative demography of commercially important species of coral grouper, Plectropomus leopardus and P. laevis, from Australia's great barrier reef and Coral Sea marine parks. Journal of Fish Biology, 97 (4). pp. 1165-1176.

Glasl, Bettina, Robbins, Steven, Frade, Pedro R., Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole N. (2020) Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 1435-1450.

Nayfa, Maria G., Jones, Dave B., Benzie, John A.H., Jerry, Dean R., and Zenger, Kyall R. (2020) Comparing genomic signatures of selection between the Abbassa Strain and eight wild populations of Nile tilapia (Oreochromis niloticus) in Egypt. Frontiers in Genetics, 11. 567969.

Hair, Cathy, Militz, Thane, Daniels, Nicholas, and Southgate, Paul C. (2020) Comparison of survival, growth and burying behavior of cultured and wild sandfish (Holothuria scabra) juveniles: implications for ocean mariculture. Aquaculture, 526. 735355.

Blake, Denise F., Crowe, Melissa, Lindsay, David, Brouff, Annie, Mitchell, Simon, Leggat, Peter, and Pollock, Neal (2020) Comparison of tissue oxygenation achieved breathing oxygen using different delivery devices and flow rates. Diving and Hyperbaric Medicine, 50 (1). pp. 34-42.

Barrios-Garrido, Hector, Shimada, Takahiro, Diedrich, Amy, and Hamann, Mark (2020) Conservation and enforcement capacity index (CECi): integrating human development, economy, and marine turtle status. Journal of Environmental Management, 262. 110311.

Bradley, Michael, Nagelkerken, Ivan, Baker, Ronald, and Sheaves, Marcus (2020) Context dependence: a conceptual approach for understanding the habitat relationships of Coastal Marine Fauna. BioScience, 70 (11). pp. 986-1004.

Smallhorn-West, Patrick, Garvin, J.B., Slayback, D.A., DeCarlo, T.M., Gordon, S.E., Fitzgerald, S.H., Halafihi, T., Jones, G.P., and Bridge, T.C.L. (2020) Coral reef annihilation, persistence and recovery at Earth's youngest volcanic island. Coral Reefs, 39. pp. 529-536.

Hein, Margaux Y., Beeden, Roger, Birtles, Alastair, Gardiner, Naomi M., Le Berre, Thomas, Levy, Jessica, Marshall, Nadine, Scott, Chad M., Terry, Lisa, and Willis, Bette L. (2020) Coral restoration effectiveness: multiregional snapshots of the long-term responses of coral assemblages to restoration. Diversity, 12 (4). 153.

Siboni, Nachshon, Abrego, David, Puill-Stephan, Eneour, King, William L., Bourne, David G., Raina, Jean-Baptiste, Seymour, Justin R., and Harder, Tilmann (2020) Crustose coralline algae that promote coral larval settlement harbor distinct surface bacterial communities. Coral Reefs, 39 (6). pp. 1703-1713.

Álvarez-Varas, Rocío, Barrios-Garrido, Héctor, Skamiotis-Gómez, Iohandy, and Petitpas, Robert (2020) Cultural role of sea turtles on Rapa Nui (Easter Island): spatial and temporal contrast in the Pacific island region. Island Studies Journal, 15 (1). pp. 253-270.

Romá, M., Fernández, E., Zamborain-Mason, J., Martínez, L., and Méndez, G. (2020) Decadal changes in the spatial coverage of Zostera noltei in two seagrass meadows (Ría de Vigo; NW Spain). Regional Studies in Marine Science, 36. 101264.

Thurber, Rebecca Vega, Mydlarz, Laura D., Brandt, Marilyn, Harvell, Drew, Weil, Ernesto, Raymundo, Laurie, Willis, Bette L., Langevin, Stan, Tracy, Allison M., Littman, Raechel, Kemp, Keri M., Dawkins, Phoebe, Prager, Katherine C., Garren, Melissa, and Lamb, Joleah (2020) Deciphering coral disease dynamics: integrating host, microbiome, and the changing environment. Frontiers in Ecology and Evolution, 8. 575927.

Hughes, A.T., Hamilton, R.J., Choat, J.H., and Rhodes, K.L. (2020) Declining grouper spawning aggregations in Western Province, Solomon Islands, signal the need for a modified management approach. PLoS ONE, 15 (3). e0230485.

Assis, Juliana M., Abreu, Fernanda, Villela, Helena M.D., Barno, Adam, Valle, Rafael F., Vieira, Rayssa, Taveira, Igor, Duarte, Gustavo, Bourne, David G., Høj, Lone, and Peixoto, Raquel S. (2020) Delivering beneficial microorganisms for corals: rotifers as carriers of probiotic bacteria. Frontiers In Microbiology, 11. 608506.

McKenzie, Madeline R., Templeman, Michelle A., and Kingsford, Michael J. (2020) Detecting effects of herbicide runoff: the use of Cassiopea maremetens as a biomonitor to hexazinone. Aquatic Toxicology, 221. 105442.

Lau, Sally C. Y., Wilson, Nerida G., Silva, Catarina N. S., and Strugnell, Jan M. (2020) Detecting glacial refugia in the Southern Ocean. Ecography, 43 (11). pp. 1639-1656.

Guppy, Jarrod L., Jones, David B., Kjeldsen, Shannon R., Le Port, Agnes, Khatkar, Mehar S., Wade, Nicholas M., Sellars, Melony J., Raadsma, Herman W., Jerry, Dean R., and Zenger, Kyall R. (2020) Development and validation of a RAD-Seq target-capture based genotyping assay for routine application in advanced black tiger shrimp (Penaeus monodon) breeding programs. BMC Genomics, 21. 541.

Jones, Clive M., and Valverde, Colin (2020) Development of mass production hatchery technology for the redclaw crayfish, Cherax quadricarinatus. Freshwater Crayfish, 25 (1). pp. 1-6.

Hannan, Kelly D., Miller, Gabrielle M., Watson, Sue-Ann, Rummer, Jodie L., Fabricius, Katharina, and Munday, Philip L. (2020) Diel pCO(2)variation among coral reefs and microhabitats at Lizard Island, Great Barrier Reef. Coral Reefs, 39. pp. 1391-1406.

Candebat, Caroline Lourdes, Booth, Mark, Codabaccus, Mohamed Basseer, and Pirozzi, Igor (2020) Dietary methionine spares the requirement for taurine in juvenile Yellowtail Kingfish (Seriola lalandi). Aquaculture, 522. 735090.

Coppock, Amy G., González-Murcia, Saúl O., Srinivasan, Maya, Gardiner, Naomi M., and Jones, Geoffrey P. (2020) Different responses of coral and rubble-dwelling coral reef damselfishes (Family: Pomacentridae) to chemosensory cues from coral reef microhabitats. Marine Biology, 167. 74.

Mashkour, Narges, Jones, Karina, Kophamel, Sara, Hipolito, Teresa, Ahasan, Shamim, Walker, Grant, Jakob-Hoff, Richard, Whittaker, Maxine, Hamann, Mark, Bell, Ian, Elliman, Jennifer, Owens, Leigh, Saladin, Claire, Crespo-Picazo, Jose Luis, Gardner, Brett, Loganathan, Aswini Leela, Bowater, Rachel, Young, Erina, Robinson, David, Baverstock, Warren, Blyde, David, March, Duan, Eghbali, Maryam, Mohammadi, Maryam, Freggi, Daniela, Giliam, Jane, Hale, Mike, Nicolle, Nicholas, Spiby, Kevin, Wrobel, Daphne, Parga, Mariluz, Mobaraki, Asghar, Rajakaruna, Rupika, Hyland, Kevin P., Read, Mark, and Ariel, Ellen (2020) Disease risk analysis in sea turtles: a baseline study to inform conservation efforts. PLoS ONE, 15 (10). e0230760..

Ramsby, Blake D., Heishman, Joshua, Hoogenboom, Mia O., Whalan, Steve, and Webster, Nicole S. (2020) Dissolved inorganic nutrient enrichment does not affect sponge growth or condition. Marine Ecology - Progress Series, 634. pp. 77-88.

Martins, A. P. B., Heupel, M. R., Bierwagen, S. L., Chin, A., and Simpfendorfer, C. (2020) Diurnal activity patterns and habitat use of juvenile Pastinachus ater in a coral reef flat environment. PLoS ONE, 15 (2). e0228280.

O'Brien, Paul A., Tan, Shangjin, Yang, Chentao, Frade, Pedro R., Andreakis, Nikolaos, Smith, Hillary A., Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2020) Diverse coral reef invertebrates exhibit patterns of phylosymbiosis. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 2211-2222.

Mohamed, Amin R., Andrade, Natalia, Moya, Aurelie, Chan, Cheong Xin, Negri, Andrew P., Bourne, David G., Ying, Hua, Ball, Eldon E., and Miller, David J. (2020) Dual RNA-sequencing analyses of a coral and its native symbiont during the establishment of symbiosis. Molecular Ecology, 29 (20). pp. 3921-3937.

Cleguer, Christophe, Garrigue, Claire, and Marsh, Helene (2020) Dugong (Dugong dugon) movements and habitat use in a coral reef lagoonal ecosystem. Endangered Species Research, 43 (3). pp. 167-181.

Georgeson, L., Rigby, C. L., Emery, T. J., Fuller, M., Hartog, J., Williams, A. J., Hobday, A. J., Duffy, C. A. J., Simpfendorfer, C. A., Okuda, T., Stobutzki, I. C., and Nicol, S. J. (2020) Ecological risks of demersal fishing on deepwater chondrichthyan populations in the Southern Indian and South Pacific Oceans. ICES Journal of Marine Science, 77 (5). pp. 1711-1727.

Hein, Margaux Y., Beeden, Roger, Birtles, R. Alastair, Chase, Tory J., Couture, Fanny, Haskin, Elouise, Marshall, Nadine, Ripple, Kayla, Terry, Lisa, Willis, Bette L., Willis, Reanna, Gardiner, Naomi M., and UNSPECIFIED (2020) Effects of coral restoration on fish communities: snapshots of long-term, multiregional responses and implications for practice. Restoration Ecology, 28 (5). pp. 1158-1171.

Yang, Chentao, Zheng, Yuxuan, Tan, Shangjin, Meng, Guanliang, Rao, Wei, Yang, Caiqing, Bourne, David G., O'Brien, Paul A., Xu, Junqiang, Liao, Sha, Chen, Ao, Chen, Xiaowei, Jia, Xinrui, Zhang, Ai-bing, and Liu, Shanlin (2020) Efficient COI barcoding using high throughput single-end 400 bp sequencing. BMC Genomics, 21. 862.

Jarrold, Michael D., Welch, Megan J., McMahon, Shannon J., McArley, Tristan, Allan, Bridie J.M., Watson, Sue-Ann, Parsons, Darren M., Pether, Stephen M.J., Pope, Stephen, Nicol, Simon, Smith, Neville, Herbert, Neill, and Munday, Philip L. (2020) Elevated CO2 affects anxiety but not a range of other behaviours in juvenile yellowtail kingfish. Marine Environmental Research, 157. 104863.

Smith, Hillary A., Conlan, Jessica A., Pollock, F. Joseph, Wada, Naohisa, Shore, Amanda, Hung, Julia Yun-Hsuan, Aeby, Greta S., Willis, Bette L., Francis, David S., and Bourne, David G. (2020) Energy depletion and opportunistic microbial colonisation in white syndrome lesions from corals across the Indo-Pacific. Scientific Reports, 10. 19990.

Huerlimann, R., Cooper, M.K., Edmunds, R.C., Villacorta-Rath, C., Le Port, A., Robson, H.L.A., Strugnell, J.M., Burrows, D., and Jerry, D.R. (2020) Enhancing tropical conservation and ecology research with aquatic environmental DNA methods: an introduction for non-environmental DNA specialists. Animal Conservation, 23 (6). pp. 632-645.

Lowe, J. R., Williamson, D. H., Ceccarelli, D. M., Evans, R. D., and Russ, G. R. (2020) Environmental disturbance events drive declines in juvenile wrasse biomass on inshore coral reefs of the Great Barrier Reef. Environmental Biology of Fishes, 103. pp. 1279-1293.

Walker, Craig, Cole, Andrew, Antunes, Elsa, and Sheehan, Madoc (2020) Equilibrium moisture and drying kinetics modelling of macroalgae species Ulva ohnoi and Oedogonium intermedium. Clean Technologies, 2 (2). pp. 225-239.

Martin, Gerardo, Espinoza, Mario, Heupel, Michelle, and Simpfendorfer, Colin A. (2020) Estimating marine protected area network benefits for reef sharks. Journal of Applied Ecology, 57 (10). pp. 1969-1980.

Praeger, Christina, Vucko, Matthew J., McKinna, Lachlan, de Nys, Rocky, and Cole, Andrew (2020) Estimating the biomass density of macroalgae in land-based cultivation systems using spectral reflectance imagery. Algal Research, 50. 102009.

Valero-Rodriguez, J.M., Swearer, S.E., Dempster, T., de Nys, R., and Cole, A.J. (2020) Evaluating the performance of freshwater macroalgae in the bioremediation of nutrient-enriched water in temperate environments. Journal of Applied Phycology, 32. pp. 641-652.

Munroe, Samantha E.M., Rigby, Cassandra L., and Hussey, Nigel E. (2020) Evidence for inter- and intraspecific trophic niche separation among deepwater elasmobranchs on the southern Great Barrier Reef, Australia. Marine Ecology Progress Series, 636. pp. 107-121.

Rincon-Sandoval, Melissa, Duarte-Ribeiro, Emanuell, Davis, Aaron M., Santaquiteria, Aintzane, Hughes, Lily C., Baldwin, Carole C., Soto-Torres, Luisangely, Acero P, Arturo, Walker, H.J., Carpenter, Kent E., Sheaves, Marcus, Orti, Guillermo, Arcila, Dahiana, and Betancur-R, Ricardo (2020) Evolutionary determinism and convergence associated with water-column transitions in marine fishes. Proceedings of the National Academy of Sciences of the United States of America, 117 (52). pp. 33396-33403.

Morrissey, Scott J., Schlaefer, Jodie A., and Kingsford, Michael J. (2020) Experimental validation of the relationships between cubozoan statolith elemental chemistry and salinity and temperature. Journal of Experimental Marine Biology and Ecology, 527. 151375.

Campbell, Matthew J., Tonks, Mark L., Miller, Margaret, Brewer, David T., Courtney, Anthony J., and Simpfendorfer, Colin A. (2020) Factors affecting elasmobranch escape from turtle excluder devices (TEDs) in a tropical penaeid-trawl fishery. Fisheries Research, 224. 105456.

Shimada, Takahiro, Limpus, Colin J., Hamann, Mark, Bell, Ian, Esteban, Nicole, Groom, Rachel, and Hays, Graeme C. (2020) Fidelity to foraging sites after long migrations. Journal of Animal Ecology, 89 (4). pp. 1008-1016.

Vu, Nga T.T., Zenger, Kyall R., Guppy, Jarrod L., Sellars, Melony J., Nunes Soares Silva, Catarina N.S., Kjeldsen, Shannon R., and Jerry, Dean R. (2020) Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis. BMC Genomics, 21. 669.

Mbaru, Emmanuel K., Graham, Nicholas A.J., McClanahan, Timothy R., and Cinner, Joshua E. (2020) Functional traits illuminate the selective impacts of different fishing gears on coral reefs. Journal of Applied Ecology, 57 (2). pp. 241-252.

Luter, Heidi M., Kenkel, Carly D., Terzin, Marko, Peirce, Tyler, Laffy, Patrick W., Gibb, Karen, and Webster, Nicole S. (2020) Gene correlation networks reveal the transcriptomic response to elevated nitrogen in a photosynthetic sponge. Molecular Ecology, 29 (8). pp. 1452-1462.

Nowicki, Jessica P., Pratchett, Morgan S., Walker, Stefan P. W., Coker, Darren J., and O'Connell, Lauren A. (2020) Gene expression correlates of social evolution in coral reef butterflyfishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 287 (1929).

Chakravarti, Leela J., Buerger, Patrick, Levin, Rachel A., and van Oppen, Madeleine J.H. (2020) Gene regulation underpinning increased thermal tolerance in a laboratory-evolved coral photosymbiont. Molecular Ecology, 29 (9). pp. 1684-1703.

Noble, Tansyn N., Coman, Gregory J., Wade, Nicholas M., Thomson, Peter C., Raadsma, Herman W., Khatkar, Mehar S., Guppy, Jarrod L., and Jerry, Dean R. (2020) Genetic parameters for tolerance to gill-associated virus under challenge-test conditions in the black tiger shrimp (Penaeus monodon). Aquaculture, 516. 734428.

Noble, Tansyn H., Coman, Gregory J., Wade, Nicholas M., Thomson, Peter, Raadsma, Herman W., Khatkar, Mehar S., Guppy, Jarrod L., and Jerry, Dean R. (2020) Genetic parameters of Gill-associated virus infection and body weight under commercial conditions in black tiger shrimp, Penaeus monodon. Aquaculture, 528. 735580.

Pewan, Shedrach, Otto, John Roger, Huerlimann, Roger, Budd, Alyssa Marie, Mwangi, Felista Waithira, Edmunds, Richard Crawford, Holman, Benjamin William Behrens, Henry, Michelle Lauren Elizabeth, Kinobe, Robert Tumwesigye, Adegboye, Oyelola Abdulwasiu, and Malau-Aduli, Aduli Enoch Othniel (2020) Genetics of omega-3 long-chain polyunsaturated fatty acid metabolism and meat eating quality in Tattykeel Australian White lambs. Genes, 11 (5). 587.

Sukhavachana, Sila, Tongyoo, Pumipat, Massault, Cecile, McMillan, Nichanun, Leungnaruemitchai, Amorn, and Poompuang, Supawadee (2020) Genome-wide association study and genomic prediction for resistance against Streptococcus agalactiae in hybrid red tilapia (Oreochromis spp.). Aquaculture, 525. 735297.

Cooke, Ira, Ying, Hua, Forêt, Sylvain, Bongaerts, Pim, Strugnell, Jan M., Simakov, Oleg, Zhang, Jia, Field, Matt A., Rodriguez-Lanetty, Mauricio, Bell, Sara C., Bourne, David G., van Oppen, Madeleine J.H., Ragan, Mark A., and Miller, David J. (2020) Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts. Science Advances, 6 (48). eabc6318.

MacNeil, M. Aaron, Chapman, Demian D., Heupel, Michelle, Simpfendorfer, Colin A., Heithaus, Michael, Meekan, Mark, Harvey, Euan, Goetze, Jordan, Kiszka, Jeremy, Bond, Mark E., Currey-Randall, Leanne M., Speed, Conrad W., Sherman, C. Samantha, Rees, Matthew J., Udyawer, Vinay, Flowers, Kathryn I., Clementi, Gina, Valentin-Albanese, Jasmine, Gorham, Taylor, Adam, M. Shiham, Ali, Khadeeja, Pina-Amargós, Fabián, Angulo-Valdés, Jorge A., Asher, Jacob, Barcia, Laura García, Beaufort, Océane, Benjamin, Cecilie, Bernard, Anthony T.F, Berumen, Michael L., Bierwagen, Stacy, Bonnema, Erika, Bown, Rosalind M.K., Bradley, Darcy, Brooks, Edd, Brown, J. Jed, Buddo, Dayne, Burke, Patrick, Cáceres, Camila, Cardeñosa, Diego, Carrier, Jeffrey C., Caselle, Jennifer E., Charloo, Venkatesh, Claverie, Thomas, Clua, Eric, Cochran, Jesse E.M., Cook, Neil, Cramp, Jessica, D'Alberto, Brooke, de Graaf, Martin, Dornhege, Mareike, Estep, Andy, Fanovich, Lanya, Farabough, Naomi F., Fernando, Daniel, Flam, Anna L., Floros, Camilla, Fourqurean, Virginia, Garla, Ricardo, Gastrich, Kirk, George, Lachlan, Graham, Rory, Guttridge, Tristan, Hardenstine, Royale S., Heck, Stephen, Henderson, Aaron C., Hertler, Heidi, Hueter, Robert, Johnson, Mohini, Jupiter, Stacy, Kasana, Devanshi, Kessel, Steven T., Kiilu, Benedict, Kirata, Taratu, Kuguru, Baraka, Kyne, Fabian, Langlois, Tim, Lédée, Elodie J.I., Lindfield, Steve, Luna-Acosta, Andrea, Maggs, Jade, Manjaji-Matsumoto, B. Mabel, Marshall, Andrea, Matich, Philip, McCombs, Erin, McLean, Dianne, Meggs, Llewelyn, Moore, Stephen, Mukherji, Sushmita, Murray, Ryan, Kaimuddin, Muslimin, Newman, Stephen J., Nogués, Josep, Obota, Clay, O'Shea, Owen, Osuka, Kennedy, Papastamatiou, Yannis P., Perera, Nishan, Peterson, Bradley, Ponzo, Alessandro, Prasetyo, Andhika, Quamar, L.M. Sjamsul, Quinlan, Jessica, Ruiz-Abierno, Alexei, Sala, Enric, Samoilys, Melita, Schärer-Umpierre, Michelle, Schlaff, Audrey, Simpson, Nikola, Smith, Adam N.H., Sparks, Lauren, Tanna, Akshay, Torres, Rubén, Travers, Michael J., van Zinnicq Bergmann, Maurits, Vigliola, Laurent, Ward, Juney, Watts, Alexandra M., Wen, Colin, Whitman, Elizabeth, Wirsing, Aaron J., Wothke, Aljoscha, Zarza-Gonzâlez, Esteban, and Cinner, Joshua E. (2020) Global status and conservation potential of reef sharks. Nature, 583. pp. 801-803.

Nunes, Lucas T., Morais Araujo, Renato, Longo, Guilherme O., Sabino, José, and Floeter, Sergio R. (2020) Habitat and community structure modulate fish interactions in a neotropical clearwater river. Neotropical Ichthyology, 18 (1). e190127.

Nay, Tiffany J., Johansen, Jacob L., Rummer, Jodie L., Steffensen, John F., Pratchett, Morgan S., and Hoey, Andrew S. (2020) Habitat complexity influences selection of thermal environment in a common coral reef fish. Conservation Physiology, 8 (1). coaa070.

McLeod, I.M., Bostrom Einarsson, L., Creighton, C., D'Anastasi, B., Diggles, B., Dwyer, P.G., Firby, L., Le Port, A., Luongo, A., Martinez-Baena, F., McOrrie, S., Heller-Wagner, G., and Gillies, C.L (2020) Habitat value of Sydney rock oyster (Saccostrea glomerata) reefs on soft sediments. Marine and Freshwater Research, 71 (7). pp. 771-781.

Oakley-Cogan, Arun, Tebbett, Sterling B., and Bellwood, David R. (2020) Habitat zonation on coral reefs: Structural complexity, nutritional resources and herbivorous fish distributions. PLoS ONE, 15 (6). e0233498.

Raynal, J.M., Weeks, R., Pressey, R.L., Adams, A.J., Barnett, A., Cooke, S.J., and Sheaves, M. (2020) Habitat-dependent outdoor recreation and conservation organizations can enable recreational fishers to contribute to conservation of coastal marine ecosystems. Global Ecology and Conservation, 24. e01342.

McClure, Eva C., Sievers, Katherine T., Abesamis, Rene A., Hoey, Andrew S., Alcala, Angel C., and Russ, Garry R. (2020) Higher fish biomass inside than outside marine protected areas despite typhoon impacts in a complex reefscape. Biological Conservation, 241. 108354.

Morais, Renato A., Connolly, Sean R., and Bellwood, David R. (2020) Human exploitation shapes productivity–biomass relationships on coral reefs. Global Change Biology, 26 (3). pp. 1295-1305.

Winter, Sara Tabea, Fahmi, Rudianto, Didik, Laglbauer, Betty J.L., Ender, Isabel, and Simpfendorfer, Colin A. (2020) Immature individuals dominate elasmobranch fisheries of the Bali Strait. Marine and Freshwater Research, 71 (11). pp. 1488-1500.

Smallhorn-West, Patrick F., Sheehan, Jason, Malimali, Siola'a, Halafihi, Tuikolongahau, Bridge, Tom C.L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Incentivizing co-management for impact: mechanisms driving the successful national expansion of Tonga's Special Management Area program. Conservation Letters, 13 (6). e12742.

Dwyer, Ross G., Krueck, Nils C., Udyawer, Vinay, Heupel, Michelle R., Chapman, Demian, Pratt, Harold L., Garla, Ricardo, and Simpfendorfer, Colin A. (2020) Individual and population benefits of marine reserves for reef sharks. Current Biology, 30 (3). e5. pp. 480-489.

Winther, Jan Gunnar, Dai, Minhan, Rist, Therese, Hoel, Alf Håkon, Li, Yangfan, Trice, Amy, Morrissey, Karyn, Juinio-Meñez, Marie Antonette, Fernandes, Leanne, Unger, Sebastian, Scarano, Fabio Rubio, Halpin, Patrick, and Whitehouse, Sandra (2020) Integrated ocean management for a sustainable ocean economy. Nature Ecology and Evolution, 4 (11). pp. 1451-1458.

Dam, Chinh Thi My, Ventura, Tomer, Booth, Mark, Pirozzi, Igor, Salini, Michael, Smullen, Richard, and Elizur, Abigail (2020) Intestinal transcriptome analysis highlights key differentially expressed genes involved in nutrient metabolism and digestion in yellowtail kingfish (Seriola lalandi) fed terrestrial animal and plant proteins. Genes, 11 (6). 621.

Grant, Michael I., Smart, Jonathan J., Rigby, Cassandra L., White, William T., Chin, Andrew, Baje, Leontine, and Simpfendorfer, Colin A. (2020) Intraspecific demography of the silky shark (Carcharhinus falciformis): implications for fisheries management. ICES Journal of Marine Science, 77 (1). pp. 241-255.

Jones, G.P., Barone, G., Sambrook, K., and Bonin, M.C. (2020) Isolation promotes abundance and species richness of fishes recruiting to coral reef patches. Marine Biology, 167. 167.

Steinberg, Rosemary K., van der Meer, Martin H., Pratchett, Morgan S., van Herwerden, Lynne, and Hobbs, Jean-Paul A. (2020) Keep your friends close and your anemones closer - ecology of the endemic wideband anemonefish, Amphiprion latezonatus. Environmental Biology of Fishes, 103. pp. 1513-1526.

Henderson, Christopher J., Gilby, Ben L., Schlacher, Thomas A., Connolly, Rod M., Sheaves, Marcus, Maxwell, Paul S., Flint, Nicole, Borland, Hayden P., Martin, Tyson S.H., Gorissen, Bob, and Olds, Andrew D. (2020) Landscape transformation alters functional diversity in coastal seascapes. Ecography, 43 (1). pp. 138-148.

Harohau, Daykin, Blythe, Jessica, Sheaves, Marcus, and Diedrich, Amy (2020) Limits of tilapia aquaculture for rural livelihoods in the Solomon Islands. Sustainability, 12. 4592.

Karnad, Divya, Sutaria, Dipani, and Jabado, Rima W. (2020) Local drivers of declining shark fisheries in India. Ambio, 49 (2). pp. 616-627.

Fulton, Christopher J., Berkstrom, Charlotte, Wilson, Shaun K., Abesamis, Rene, Bradley, Michael, Åkerlund, Carolina, Barrett, Luke T., Bucol, Abner A., Chacin, Dinorah H., Chong-Seng, Karen M., Coker, Darren J., Depczynski, Martial, Eggertsen, Linda, Eggertsen, Maria, Ellis, David, Evans, Richard D., Graham, Nicholas A.J., Hoey, Andrew S., Holmes, Thomas H., Kulbicki, Michel, Leung, Priscilla T.Y., Lam, Paul K. S., van Lier, Joshua, Matis, Paloma A., Noble, Mae M., Perez-Matus, Alejandro, Piggott, Camilla, Radford, Ben T., Tano, Stina, and Tinkler, Paul (2020) Macroalgal meadow habitats support fish and fisheries in diverse tropical seascapes. Fish and Fisheries, 21 (4). pp. 700-717.

Lyons, Mitchell B., Roelfsema, Chris M., Kennedy, Emma V., Kovacs, Eva M., Borrego-Acevedo, Rodney, Markey, Kathryn, Roe, Meredith, Yuwono, Doddy M., Harris, Daniel L., Phinn, Stuart R., Asner, Gregory P., Li, Jiwei, Knapp, David E., Fabina, Nicholas S., Larsen, Kirk, Traganos, Dimosthenis, and Murray, Nicholas J. (2020) Mapping the world's coral reefs using a global multiscale earth observation framework. Remote Sensing in Ecology and Conservation, 6 (4). pp. 557-568.

Cinner, Joshua E., Zamborain Mason, Jessica, Gurney, Georgina G., Graham, Nicholas A.J., MacNeil, M. Aaron, Hoey, Andrew S., Mora, Camilo, Villéger, Sébastien, Maire, Eva, McClanahan, Tim R., Maina, Joseph M., Kittinger, John N., Hicks, Christina C., D'agata, Stephanie, Huchery, Cindy, Barnes, Michele L., Feary, David A., Williams, Ivor D., Kulbicki, Michel, Vigliola, Laurent, Wantiez, Laurent, Edgar, Graham J., Stuart-smith, Rick D., Sandin, Stuart A., Green, Alison L., Beger, Maria, Friedlander, Alan, Wilson, Shaun K., brokovich, Eran, Brooks, Andrew J., Cruz-Motta, Juan J., Booth, David J., Chabanet, Pascal, Tupper, Mark, Ferse, Sebastian C.A., Sumaila, U. Rashid, Hardt, Marah J., and Mouillot, David (2020) Meeting fisheries, ecosystem function, and biodiversity goals in a human-dominated world. Science, 368 (6488). pp. 307-311.

Munday, Philip L., Dixson, Danielle, Welch, Megan J., Chivers, Douglas P., Domenici, Paolo, Grosell, Martin, Heuer, Rachael M., Jones, Geoffrey P., McCormick, Mark I., Meekan, Mark, Nilsson, Göran E., Ravasi, Timothy, and Watson, Sue-Ann (2020) Methods matter in repeating ocean acidification studies. Nature, 586. E20-E24.

Marchioro, Giulia, Glasl, Bettina, Engelen, Aschwin H., Serrao, Ester A., Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2020) Microbiome dynamics in the tissue and mucus of acroporid corals differ in relation to host and environmental parameters. PeerJ, 8. e9644.

Mizrahi, Me'ira, Duce, Stephanie, Khine, Zin Lin, MacKeracher, Tracy, Maung, Khin May Chit, Phyu, Ei Thal, Pressey, Robert L., Simpfendorfer, Colin, and Diedrich, Amy (2020) Mitigating negative livelihood impacts of no-take MPAs on small-scale fishers. Biological Conservation, 245. 108554.

Kinley, Robert D., Martinez-Fernandez, Gonzalo, Matthews, Melissa K., de Nys, Rocky, Magnusson, Marie, and Tomkins, Nigel W. (2020) Mitigating the carbon footprint and improving productivity of ruminant livestock agriculture using a red seaweed. Journal of Cleaner Production, 259.

Jones, K., Burgess, G., Budd, A.M., Huerlimann, R., Mashkour, N., and Ariel, E. (2020) Molecular evidence for horizontal transmission of chelonid alphaherpesvirus 5 at green turtle (Chelonia mydas) foraging grounds in Queensland, Australia. PLoS ONE, 15 (1). e0227268.

Huerlimann, Roger, Maes, Gregory E., Maxwell, Michael J., Mobli, Mehdi, Launikonis, Bradley S., Jerry, Dean R., and Wade, Nicholas M. (2020) Multi-species transcriptomics reveals evolutionary diversity in the mechanisms regulating shrimp tail muscle excitation-contraction coupling. Gene, 752. 144765.

Murray, Nicholas J., Keith, David A., Duncan, Adam, Tizard, Robert, Ferrer-Paris, Jose R., Worthington, Thomas A., Armstrong, Kate, Hlaing, Nyan, Htut, Win Thuya, Oo, Aung Htat, Zay Ya, Kyaw, and Grantham, Hedley (2020) Myanmar's terrestrial ecosystems: status, threats and conservation opportunities. Biological Conservation, 252. 108834.

Rueger, Theresa, Harrison, Hugo B., Buston, Peter M., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2020) Natal philopatry increases relatedness within groups of coral reef cardinalfish: Natal philopatry increases relatedness. Proceedings of the Royal Society of London Series B, Biological Sciences, 287 (1930). 20201133.

Sievers, Katie T., McClure, Eva, Abesamis, Rene A., and Russ, Garry R. (2020) Non-reef habitats in a tropical seascape affect density and biomass of fishes on coral reefs. Ecology and Evolution, 10 (24). pp. 13673-13686.

Currey-Randall, Leanne M., Cappo, Mike, Simpfendorfer, Colin A., Farabaugh, Naomi F., and Heupel, Michelle R. (2020) Optimal soak times for Baited Remote Underwater Video Station surveys of reef-associated elasmobranchs. PLoS One, 15 (5). e0231688.

Sheaves, Marcus, Bradley, Michael, Herrera, Cesar, Mattone, Carlo, Lennard, Caitlin, Sheaves, Janine, and Konovalov, Dmitry A. (2020) Optimizing video sampling for juvenile fish surveys: using deep learning and evaluation of assumptions to produce critical fisheries parameters. Fish and Fisheries, 21 (6). pp. 1259-1276.

Skilton, Dylan C., Saunders, Richard J., and Hutson, Kate S. (2020) Parasite attractants: identifying trap baits for parasite management in aquaculture. Aquaculture, 516. 734557.

Allan, Bridie J.M., Illing, Björn, Fakan, Eric P., Narvaez, Pauline, Grutter, Alexandra S., Sikkel, Paul C., McClure, Eva C., Rummer, Jodie L., and McCormick, Mark (2020) Parasite infection directly impacts escape response and stress levels in fish. Journal of Experimental Biology, 223 (16). jeb230904.

Barton, Jonathan A., Bourne, David G., Humphrey, Craig, and Hutson, Kate S. (2020) Parasites and coral-associated invertebrates that impact coral health. Reviews in Aquaculture, 12 (4). pp. 2284-2303.

Atherton, Jennifer A., and McCormick, Mark I. (2020) Parents know best: transgenerational predator recognition through parental effects. PeerJ, 8. e9340.

Fitzsimmons, Nancy N., Pittard, Stewart D., McIntyre, Nathan, Jensen, Michael P., Guinea, Mick, Hamann, Mark, Kennett, Rod, Leis, Brett, Limpus, Colin J., Limpus, Duncan J., McCann, Megan J., MacDonald, Anna J., McFarlane, Glenn, Parmenter, C. John, Pendoley, Kellie, Prince, Robert T., Scheltinga, Leigh, Theissinger, Kathrin, Tucker, Anton D., Waayers, David, Whiting, Andrea, and Whiting, Scott (2020) Phylogeography, genetic stocks, and conservation implications for an Australian endemic marine turtle. Aquatic Conservation: Marine and Freshwater Ecosystems, 30 (3). pp. 440-460.

Nielsen, J.J.V., Kenkel, C.D., Bourne, D.G., Despringhere, L., Mocellin, V.J.L., and Bay, L.K. (2020) Physiological effects of heat and cold exposure in the common reef coral Acropora millepora. Coral Reefs, 39 (2). pp. 259-269.

Nayfa, Maria G., Jones, David B., Lind, Curtis E., Benzie, John A.H., Jerry, Dean R., and Zenger, Kyall R. (2020) Pipette and paper: combining molecular and genealogical methods to assess a Nile tilapia (Oreochromis niloticus) breeding program. Aquaculture, 523. 735171.

Larson, Helen K., Jaafar, Zeehan, Hui, Tan Heok, and Peristiwady, Teguh (2020) Platygobiopsis hadiatyae, a new species of deepwater gobiid from Indonesia (Teleostei, gobiidae, gobiinae). Raffles Bulletin of Zoology, 68. pp. 14-18.

Dibattista, Joseph D., Saenz-agudelo, Pablo, Piatek, Marek J., Cagua, Edgar Fernando, Bowen, Brian W., Choat, John Howard, Rocha, Luiz A., Gaither, Michelle R., Hobbs, Jean-Paul A., Sinclair-taylor, Tane H., McIlwain, Jennifer H., Priest, Mark A., Braun, Camrin D., Hussey, Nigel E., Kessel, Steven T., and Berumen, Michael L. (2020) Population genomic response to geographic gradients by widespread and endemic fishes of the Arabian Peninsula. Ecology and Evolution, 10 (10). pp. 4314-4330.

Grutter, Alexandra S., Feeney, William E., Hutson, Kate S., McClure, Eva C., Narvaez, Pauline, Smit, Nico J., Sun, Derek, and Sikkel, Paul C. (2020) Practical methods for culturing parasitic gnathiid isopods. International Journal for Parasitology, 50 (10-11). pp. 825-837.

Jin, Young K., Kininmonth, Stuart, Lundgren, Petra B., van Oppen, Madeleine J.H., and Willis, Bette L. (2020) Predicting the spatial distribution of allele frequencies for a gene associated with tolerance to eutrophication and high temperature in the reef-building coral, Acropora millepora, on the Great Barrier Reef. Coral Reefs, 39. pp. 147-158.

Udyawer, Vinay, Somaweera, Ruchira, Nitschke, Charlotte, d'Anastasi, Blanche, Sanders, Kate, Webber, Bruce L., Hourston, Mathew, and Heupel, Michelle R. (2020) Prioritising search effort to locate previously unknown populations of endangered marine reptiles. Global Ecology and Conservation, 22. e01013.

Wolfe, Kennedy, Anthony, Ken, Babcock, Russell C., Bay, Line, Bourne, David G., Burrows, Damien, Byrne, Maria, Deaker, Dione, Diaz-Pulido, Guillermo, Frade, Pedro, Gonzalez-Rivero, Manuel, Hoey, Andrew, Hoogenboom, Mia, McCormick, Mark, Ortiz, Juan Carlos, Razak, Tries, Richardson, Anthony J., Roff, George, Sheppard-Brennand, Hannah, Stella, Jessica, Thompson, Angus, Watson, Sue-Ann, Webster, Nicole, Audas, Donna, Beeden, Roger, Carver, Jesseca, Cowlishaw, Mel, Dyer, Michelle, Groves, Paul, Horne, Dylan, Thiault, Lauric, Vains, Jason, Wachenfeld, David, Weekers, Damien, Williams, Genevieve, and Mumby, Peter J. (2020) Priority species to support the functional integrity of coral reefs. Oceanography and Marine Biology: an annual review, 58. pp. 179-318.

Caruana, Nikeisha J., Strugnell, Jan M., Finn, Julian, Faou, Pierre, Plummer, Kim M., and Cooke, Ira R. (2020) Quantitative proteomic analysis of the slime and ventral mantle glands of the Striped Pyjama squid (Sepioloidea lineolata). Journal of Proteome Research, 19. pp. 1491-1501.

Chen, Jun Yu, Zeng, Chaoshu, Jerry, Dean R., and Cobcroft, Jennifer M. (2020) Recent advances of marine ornamental fish larviculture: broodstock reproduction, live prey and feeding regimes, and comparison between demersal and pelagic spawners. Reviews in Aquaculture, 12 (3). pp. 1518-1541.

Godley, B.J., Broderick, A.C., Colman, L.P., Formia, A., Godfrey, M.H., Hamann, M., Nuno, A., Omeyer, L.C.M., Patricio, A.R., Phillott, A.D., Rees, A.F., and Shanker, K. (2020) Reflections on sea turtle conservation. Oryx, 54 (3). pp. 287-289.

Sherman, C. Samantha, Heupel, Michelle R., Johnson, Mohini, Kaimuddin, Muslimin, Qamar, L. M. Sjamsul, Chin, Andrew, and Simpfendorfer, Colin A. (2020) Repeatability of baited remote underwater video station (BRUVS) results within and between seasons. PLoS ONE, 15 (12). e0244154.

Mendoza-Porras, Omar, Kamath, Sandip, Harrison, James O., Colgrave, Michelle L., Huerlimann, Roger, Lopata, Andreas L., and Wade, Nicholas M. (2020) Resolving hemocyanin isoform complexity in haemolymph of black tiger shrimp Penaeus monodon - implications in aquaculture, medicine and food safety. Journal of Proteomics, 218. 103689.

Lau, Sally C.Y., Thomas, Marine, Hancock, Boze, and Russell, Bayden D. (2020) Restoration potential of Asian oysters on heavily developed coastlines. Restoration Ecology, 28 (6). pp. 1643-1653.

Hoffmann, Luke, Edwards, Will, York, Paul H., and Rasheed, Michael A. (2020) Richness of primary producers and consumer abundance mediate epiphyte loads in a tropical seagrass system. Diversity, 12 (10). 384.

Shi, Wenyuan, Liu, Fang, Liu, An, Huang, Huiyang, Lin, Qi, Zeng, Chaoshu, and Ye, Haihui (2020) Roles of gonad-inhibiting hormone in the protandric simultaneous hermaphrodite peppermint shrimp. Biology of Reproduction, 103 (4). pp. 817-827.

Jinks, Kristin I., Rasheed, Michael A., Brown, Christopher J., Olds, Andrew D., Schlacher, Thomas A., Sheaves, Marcus, York, Paul H., and Connolly, Rod M. (2020) Saltmarsh grass supports fishery food webs in subtropical Australian estuaries. Estuarine, Coastal and Shelf Science, 238. 106719.

Jurriaans, Saskia, and Hoogenboom, Mia O. (2020) Seasonal acclimation of thermal performance in two species of reef-building corals. Marine Ecology Progress Series, 635. pp. 55-70.

Neveux, Nicolas, Nugroho, A.A., Roberts, D.A., Vucko, M.J., and de Nys, R. (2020) Selecting extraction conditions for the production of liquid biostimulants from the freshwater macroalga Oedogonium intermedium. Journal of Applied Phycology, 32. pp. 539-551.

Whitman, Taylor N., Negri, Andrew P., Bourne, David G., and Randall, Carly J. (2020) Settlement of larvae from four families of corals in response to a crustose coralline alga and its biochemical morphogens. Scientific Reports, 10. 16397.

Morais, Renato A., Depczynski, Martial, Fulton, Christopher, Marnane, Michael, Narvaez, Pauline, Huertas, Victor, Brandl, Simon J., and Bellwood, David R. (2020) Severe coral loss shifts energetic dynamics on a coral reef. Functional Ecology, 34 (7). pp. 1507-1518.

Schlaff, Audrey M., Heupel, Michelle R., Udyawer, Vinay, and Simpfendorfer, Colin A. (2020) Sex-based differences in movement and space use of the blacktip reef shark, Carcharhinus melanopterus. PLoS One, 15 (4). e0231142.

Randall, Carly J., Negri, Andrew P., Quigley, Kate M., Foster, Taryn, Ricardo, Gerard F., Webster, Nicole S., Bay, Line K., Harrison, Peter L., Babcock, Russ C., and Heyward, Andrew J. (2020) Sexual production of corals for reef restoration in the Anthropocene. Marine Ecology Progress Series, 635. pp. 203-232.

Birkmanis, Charlotte A., Partridge, Julian C., Simmons, Leigh W., Heupel, Michelle R., and Sequeira, Ana M.M. (2020) Shark conservation hindered by lack of habitat protection. Global Ecology and Conservation, 21. e00862.

White, William T., Baje, Leontine, Appleyard, Sharon A., Chin, Andrew, Smart, Jonathan J., and Simpfendorfer, Colin A. (2020) Shark longline fishery of Papua New Guinea: size and species composition and spatial variation of the catches. Marine and Freshwater Research, 71. pp. 627-640.

Abesamis, Rene A., Utzurrum, Jean Asuncion T., Raterta, Lucille Jean J., and Russ, Garry R. (2020) Shore-fish assemblage structure in the central Philippines from shallow coral reefs to the mesophotic zone. Marine Biology, 167 (12). 185.

Botté, E.S., Luter, H.M., Marangon, E., Patel, F., Uthicke, S., and Webster, N.S. (2020) Simulated future conditions of ocean warming and acidification disrupt the microbiome of the calcifying foraminifera Marginopora vertebralis across life stages. Environmental Microbiology Reports, 12 (6). pp. 693-701.

Riedel, Jendrian, Vucko, Matthew John, Blomberg, Simone P., and Schwarzkopf, Lin (2020) Skin hydrophobicity as an adaptation for self-cleaning in geckos. Ecology and Evolution, 10 (11). pp. 4640-4651.

Hair, Cathy, Foale, Simon, Daniels, Nicholas, Minimulu, Peter, Aini, John, and Southgate, Paul C. (2020) Social and economic challenges to community-based sea cucumber mariculture development in New Ireland Province, Papua New Guinea. Marine Policy, 117. 103940.

Caswell, Bryony A., Klein, Emily S., Alleway, Heidi, Ball, Johnathan E., Botero, Julián, Cardinale, Massimiliano, Eero, Margit, Engelhard, Georg H., Fortibuoni, Tomaso, Giraldo, Ana Judith, Hentati-Sundberg, Jonas, Jones, Peter, Kittinger, John N., Krause, Gesche, Lajus, Dmitry L., Lajus, Julia, Lau, Sally C.Y., Lescrauwaet, Ann Katrien, MacKenzie, Brian R., McKenzie, Matthew, Ojaveer, Henn, Pandolfi, John M., Raicevich, Saša, Russell, Bayden, Sundelöf, Andreas, Thorpe, Robert B., zu Ermgassen, Philine S.E., and Thurstan, Ruth H. (2020) Something old, something new: historical perspectives provide lessons for blue growth agendas. Fish and Fisheries, 21 (4). pp. 774-796.

Barrios-Garrido, H., Becker, P., Bjorndal, K.A., Bolten, A.B., Diez, C.E., Espinoza-rodriguez, N., Fastigi, M., Gray, J., Harrison, E., Hart, K.A., Meylan, A., Meylan, P., Montiel-villalobos, M.G., Morales, F., Nava, M., Palmar, J., Petit-Rodriguez, M.J., Richardson, P., Rodriguez-Clark, K.M., Rojas-Canizales, D., Sandoval, M.G., Valverde, R.A., van Dam, R., Walker, J.T., Wildermann, N., and Hamann, M. (2020) Sources and movements of marine turtles in the Gulf of Venezuela: regional and local assessments. Regional Studies in Marine Science, 36. 101318.

Frade, Pedro R., Glasl, Bettina, Matthews, Samuel A., Mellin, Camille, Serrão, Ester A., Wolfe, Kennedy, Mumby, Peter J., Webster, Nicole S., Bourne, David G., and UNSPECIFIED (2020) Spatial patterns of microbial communities across surface waters of the Great Barrier Reef. Communications Biology, 3. 442.

Gainsford, Ashton, Jones, Geoffrey P., Hobbs, Jean-Paul A., Heindler, Franz Maximilian, and van Herwerden, Lynne (2020) Species integrity, introgression, and genetic variation across a coral reef fish hybrid zone. Ecology and Evolution, 10 (21). pp. 11998-12014.

Baker, Ronald, Abrantes, Kátya, and Feller, Ilka (2020) Stable isotopes suggest limited role of wetland macrophyte production supporting aquatic food webs across a mangrove-salt marsh ecotone. Estuaries and Coasts, 2021.

Miller, Rachel Lynn, Marsh, Helene, Benham, Claudia, and Hamann, Mark (2020) Stakeholder engagement in the governance of marine migratory species: barriers and building blocks. Endangered Species Research, 43. pp. 1-19.

Salles, Océane C., Almany, Glenn R., Berumen, Michael L., Jones, Geoffrey P., Saenz-Agudelo, Pablo, Srinivasan, Maya, Thorrold, Simon R., Pujol, Benoit, and Planes, Serge (2020) Strong habitat and weak genetic effects shape the lifetime reproductive success in a wild clownfish population. Ecology Letters, 23 (2). pp. 265-273.

Buddle, Alice L., Otway, Nicholas M., Van Dyke, James U., Thompson, Michael B., Murphy, Christopher R., Dowland, Samson N., Simpfendorfer, Colin A., Ellis, Megan T., and Whittington, Camilla M. (2020) Structural changes to the uterus of the dwarf ornate wobbegong shark (Orectolobus ornatus) during pregnancy. Journal of Morphology, 281 (4-5). pp. 428-437.

Shao, Luchang, and Zeng, Chaoshu (2020) Survival, growth, ingestion rate and foraging behavior of larval green mandarin fish (Synchiropus splendidus) fed copepods only versus co-fed copepods with rotifers. Aquaculture, 520. 734958.

Noordin, Noordiyana M., Zeng, Chaoshu, and Southgate, Paul C. (2020) Survival, molting pattern, and growth of early blue swimmer crab, Portunus pelagicus, juveniles fed diets containing varying levels of cholesterol. Journal of the World Aquaculture Society, 51. pp. 255-265.

Downie, Adam T., Illing, Bjorn, Faria, Ana, and Rummer, Jodie L. (2020) Swimming performance of marine fish larvae: review of a universal trait under ecological and environmental pressure. Reviews in Fish Biology and Fisheries, 30 (1). pp. 93-108.

Morgans, Carys A., Hung, Julia Y., Bourne, David G., and Quigley, Kate M. (2020) Symbiodiniaceae probiotics for use in bleaching recovery. Restoration Ecology, 28 (2). pp. 282-288.

Taylor, Brett M., Benkwitt, Cassandra E., Choat, Howard, Clements, Kendall D., Graham, Nicholas A.J., and Meekan, Mark G. (2020) Synchronous biological feedbacks in parrotfishes associated with pantropical coral bleaching. Global Change Biology, 26 (3). pp. 1285-1294.

Brazenor, Alexander K., Francis, David S., Conlan, Jessica A., Carton, Alexander G., and Hutson, Kate S. (2020) Temperature alters reproduction and maternal provisioning in a fish ectoparasite. International Journal for Parasitology, 50 (10-11). pp. 839-849.

Timmiss, Libby A., Martin, John M., Murray, Nicholas J., Welbergen, Justin A., Westcott, David, McKeown, Adam, and Kingsford, Richard T. (2020) Threatened but not conserved: flying-fox roosting and foraging habitat in Australia. Australian Journal of Zoology, 68 (6). pp. 226-233.

Martins, A. P. B., Heupel, M. R., Oakley-Cogan, A., Chin, A., and Simpfendorfer, C. (2020) Towed-float GPS telemetry: a tool to assess movement patterns and habitat use of juvenile stingrays. Marine and Freshwater Research, 71 (1). pp. 89-98.

Thomas, Marie C., Flores, Florita, Kaserzon, Sarit, Fisher, Rebecca, and Negri, Andrew P. (2020) Toxicity of ten herbicides to the tropical marine microalgae Rhodomonas salina. Scientific Reports, 10. 7610.

Vij, Shubha, Purushothanman, Kathiresan, Sridatta, Prakki Sai Rama, and Jerry, Dean R. (2020) Transcriptomic analysis of gill and kidney from Asian seabass (Lates calcarifer) acclimated to different salinities reveals pathways involved with euryhalinity. Genes, 11 (7). 733.

Huertas, Victor, and Bellwood, David R. (2020) Trophic separation in planktivorous reef fishes: a new role for mucus? Oecologia, 192 (3). pp. 813-822.

McGuire, Amy V., and Northfield, Tobin D. (2020) Tropical occurrence and agricultural importance of Beauveria bassiana and Metarhizium anisopliae. Frontiers in Sustainable Food Systems, 4. 6.

Mangott, A., Nappi, J., Delli Paoli Carini, A., Goncalves, P., Hua, K., Domingos, J.A., de Nys, R., and Thomas, T. (2020) Ulva lactuca as a functional ingredient and water bioremediator positively influences the hepatopancreas and water microbiota in the rearing of Litopenaeus vannamei. Algal Research, 51. 102040.

Rushton, Cindy, and Wilson, Kimberley (2020) Understanding the work of FLOs through a recovery framework lens. International Journal of Inclusive Education, 24 (1). pp. 1-14.

Harohau, Daykin, Blythe, Jessica, Sheaves, Marcus, and Diedrich, Amy (2020) Uneven adoption of tilapia aquaculture in rural Solomon Islands. Aquaculture International, 28. pp. 2093-2109.

Paez-Rosas, Diego, Pazmino, Diana A., and Riofrio-Lazo, Marjorie (2020) Unprecedented records of Guadalupe and Juan Fernandez fur seals in the Galapagos Archipelago. Aquatic Mammals, 46 (6). pp. 549-555.

Sievers, Katie T., Abesamis, Rene A., Bucol, Abner A., and Russ, Garry R. (2020) Unravelling seascape patterns of cryptic life stages: non-reef habitat use in juvenile parrotfishes. Diversity, 12 (10). 376.

Dunstan, Andrew, Robertson, Katharine, Fitzpatrick, Richard, Pickford, Jeffrey, and Meager, Justin (2020) Use of unmanned aerial vehicles (UAVs) for mark-resight nesting population estimation of adult female green sea turtles at Raine Island. PLoS ONE, 15 (6). e0228524.

Magnusson, Marie, Vucko, Matthew J., Neoh, Tze Loon, and de Nys, Rocky (2020) Using oil immersion to deliver a naturally-derived, stable bromoform product from the red seaweed Asparagopsis taxiformis. Algal Research, 51. 102065.

Chin, A., Rigby, C., Short, A., and White, W.T. (2020) Verified records of Kuhl's devil ray (Mobula kuhlii) in the Solomon Islands from citizen scientists. Pacific Conservation Biology, 26. pp. 100-101.

Pascelli, Cecilia, Laffy, Patrick W., Botté, Emmanuelle, Kupresanin, Marija, Rattei, Thomas, Lurgi, Miguel, Ravasi, Timothy, and Webster, Nicole S. (2020) Viral ecogenomics across the Porifera. Microbiome, 8. 144.

Sherman, C. Samantha, Heupel, Michelle R., Moore, Stephen K., Chin, Andrew, and Simpfendorfer, Colin A. (2020) When sharks are away, rays will play: effects of top predator removal in coral reef ecosystems. Marine Ecology - Progress Series, 641. pp. 145-157.

Pattiselanno, Freddy, Lloyd, Janice K.F., Sayer, Jeffrey, Boedhihartono, Agni Klintuni, and Arobaya, Agustina (2020) Wild meat trade chain on the Bird's Head Peninsula of West Papua Province, Indonesia. Journal of Ethnobiology, 40 (2). pp. 202-217.

Fingerhut, Legana C. H. W., Miller, David J., Strugnell, Jan M., Daly, Norelle L., and Cooke, Ira R. (2020) ampir: an R package for fast genome-wide prediction of antimicrobial peptides. Bioinformatics, 36 (21). btaa653.

He, Zimeng, Saw, Woei L., Lane, Daniel J., van Eyk, Philip J., de Nys, Rocky, Nathan, Graham J., and Ashman, Peter J. (2020) The ash-quartz sand interaction behaviours during steam gasification or combustion of a freshwater and a marine species of macroalgae. Fuel, 263. 116621.

Lima, Francoise D., Strugnell, Jan M., Leite, Tatiana S., and Lima, Sergio M.Q. (2020) A biogeographic framework of octopod species diversification: the role of the Isthmus of Panama. PeerJ, 8. e8691.

Sheaves, Marcus, Abrantes, Katya, Barnett, Adam, Benham, Claudia, Dale, Patricia, Mattone, Carlo, Sheaves, Alison, Waltham, Nathan, and Bradley, Michael (2020) The consequences of paradigm change and poorly validated science: the example of the value of mangroves to fisheries. Fish and Fisheries, 21 (5). pp. 1067-1075.

Candebat, Caroline L., Booth, Mark, Williamson, Jane E., and Pirozzi, Igor (2020) The critical oxygen threshold of Yellowtail Kingfish (Seriola lalandi). Aquaculture, 516. 734519.

Voight, Janet R., Kurth, Jessica A., Strauss, Richard E., Strugnell, Jan M., and Allcock, Louise A. (2020) A depth cline in deep-sea octopods (Cephalopoda: Graneledone) in the northeast Pacific Ocean. Bulletin of Marine Science, 96 (2). pp. 323-340.

Hayes, Matthew A., McClure, Eva C., York, Paul H., Jinks, Kristin I., Rasheed, Michael A., Sheaves, Marcus, and Connolly, Rod M. (2020) The differential importance of deep and shallow seagrass to Nekton assemblages of The Great Barrier Reef. Diversity, 12 (8). 292.

Nordborg, F. Mikaela, Jones, Ross J., Oelgemöller, Michael, and Negri, Andrew P. (2020) The effects of ultraviolet radiation and climate on oil toxicity to coral reef organisms – a review. Science of the Total Environment, 720. 137486.

Armstrong, Amelia J., Armstrong, Asia O., Bennett, Michael B., McGregor, Frazer, Abrantes, Kátya G., Barnett, Adam, Richardson, Anthony J., Townsend, Kathy A., and Dudgeon, Christine L. (2020) The geographic distribution of reef and oceanic manta rays (Mobula alfredi and Mobula birostris) in Australian coastal waters. Journal of Fish Biology, 96 (3). pp. 835-840.

Worthington, Thomas A., zu Ermgassen, Philine S.E., Friess, Daniel A., Krauss, Ken W., Lovelock, Catherine E., Thorley, Julia, Tingey, Rick, Woodroffe, Colin D., Bunting, Pete, Cormier, Nicole, Lagomasino, David, Lucas, Richard, Murray, Nicholas J., Sutherland, William J., and Spalding, Mark (2020) A global biophysical typology of mangroves and its relevance for ecosystem structure and deforestation. Scientific Reports, 10 (1). 14652.

Li, Jiwei, Knapp, David E., Fabina, Nicholas S., Kennedy, Emma V., Larsen, Kirk, Lyons, Mitchell B., Murray, Nicholas J., Phinn, Stuart R., Roelfsema, Chris M., and Asner, Gregory P. (2020) A global coral reef probability map generated using convolutional neural networks. Coral Reefs, 39 (6). pp. 1805-1815.

Lester, Emily K., Langlois, Tim J., Simpson, Stephen D., McCormick, Mark I., and Meekan, Mark G. (2020) The hemisphere of fear: the presence of sharks influences the three dimensional behaviour of large mesopredators in a coral reef ecosystem. Oikos, 129 (5). pp. 731-739.

Jones, David B., Nguyen, Huu, Khatkar, Mehar, Simma, David, Jerry, Dean, Raadsma, Herman, Van Der Steen, Hein, Prochaska, Jeffrey, and Zenger, Kyall (2020) The identification of a major sex QTL in the white-leg shrimp, Litopenaeus vannamei. Aquaculture, 529. 735673.

Nunes, Lucas T., Siqueira, Alexandre C., Cord, Isadora, Ford, Benjamin M., Liedke, Ana M.R., Ferreira, Carlos E.L., and Floeter, Sergio R. (2020) The influence of species abundance, diet and phylogenetic affinity on the co-occurrence of butterflyfishes. Marine Biology, 167 (8). 107.

Kidgell, Joel T., Glasson, Christopher R.K., Magnusson, Marie, Vamvounis, George, Sims, Ian M., Carnachan, Susan M., Hinkley, Simon F.R., Lopata, Andreas L., de Nys, Rocky, and Taki, Aya C. (2020) The molecular weight of ulvan affects the in vitro inflammatory response of a murine macrophage. International Journal of Biological Macromolecules, 150. pp. 839-848.

Younes, Nicolas, Northfield, Tobin D., Joyce, Karen E., Maier, Stefan W., Duke, Norman C., and Lymburner, Leo (2020) A novel approach to modelling mangrove phenology from satellite images: a case study from Northern Australia. Remote Sensing, 12 (24). 4008.

Saleh, Alzayat, Laradji, Issam H., Konovalov, Dmitry A., Bradley, Michael, Vazquez, David, and Sheaves, Marcus (2020) A realistic fish-habitat dataset to evaluate algorithms for underwater visual analysis. Scientific Reports, 10. 14671.

Rigg, Damian, Seymour, Jamie E., Courtney, Robert L., and Jones, Clive M. (2020) A review of juvenile redclaw crayfish Cherax quadricarinatus (von Martens, 1898) Aquaculture: global production practices and innovation. Freshwater Crayfish, 25 (1). pp. 13-30.

Oudot, Morgane, Neige, Pascal, Ben Shir, Ira, Schmidt, Asher, Strugnell, Jan M., Plasseraud, Laurent, Broussard, Cédric, Hoffmann, René, Lukeneder, Alexander, and Marin, Frédéric (2020) The shell matrix and microstructure of the Ram's Horn squid: molecular and structural characterization. Journal of Structural Biology, 211 (1). 107507.

Kyne, Peter M., Jabado, Rima W., Rigby, Cassandra L., Dharmadi, Gore, Mauvis A., Pollock, Caroline M., Herman, Katelyn B., Cheok, Jessica, Ebert, David A., Simpfendorfer, Colin A., and Dulvy, Nicholas K. (2020) The thin edge of the wedge: extremely high extinction risk in wedgefishes and giant guitarfishes. Aquatic Conservation: marine and freshwater ecosystems, 30 (7). pp. 1337-1361.

Dubuc, Alexia, Baker, Ronald, Marchand, Cyril, Waltham, Nathan J., and Sheaves, Marcus (2019) Hypoxia in mangroves: occurrence and impact on valuable tropical fish habitat. Biogeosciences, 16 (20). pp. 3959-3976.

Abrantes, Kátya G., Sheaves, Marcus, and Fries, Jakob (2019) Estimating the value of tropical coastal wetland habitats to fisheries: caveats and assumptions. PLoS ONE, 14 (4). e0215350.

Zenger, Kyall R., Khatkar, Mehar S., Jones, David B., Khalilisamani, Nima, Jerry, Dean R., and Raadsma, Herman W. (2019) Genomic selection in aquaculture: application, limitations and opportunities with special reference to marine shrimp and pearl oysters. Frontiers in Genetics, 9. 693.

Devloo-Delva, Floriaan, Maes, Gregory E., Hernández, Sebastián I., Mcallister, Jaime D., Gunasekera, Rasanthi M., Grewe, Peter M., Thomson, Robin B., and Feutry, Pierre (2019) Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus. Ecology and Evolution, 9 (8). pp. 4465-4472.

Gordon, Timothy A. C., Radford, Andrew N., Davidson, Isla K., Barnes, Kasey, McCloskey, Kieran, Nedelec, Sophie L., Meekan, Mark G., McCormick, Mark I., and Simpson, Stephen D. (2019) Acoustic enrichment can enhance fish community development on degraded coral reef habitat. Nature Communications, 10. 5414.

Heupel, Michelle R., Kanno, Shiori, Martins, Ana P.B., and Simpfendorfer, Colin A. (2019) Advances in understanding the roles and benefits of nursery areas for elasmobranch populations. Marine and Freshwater Research, 70 (7). pp. 897-907.

Silva, Catarina N.S., Villacorta-Rath, Cecilia, Woodings, Laura N., Murphy, Nicholas P., Green, Bridget S., Hartmann, Klaas, Gardner, Caleb, Bell, James J., and Strugnell, Jan M. (2019) Advancing our understanding of the connectivity, evolution and management of marine lobsters through genetics. Reviews in Fish Biology and Fisheries, 29 (3). pp. 669-687.

Baje, Leontine, Smart, Jonathan J., Grant, Michael I., Chin, Andrew, White, William T., and Simpfendorfer, Colin A. (2019) Age, growth and maturity of the Australian blackspot shark (Carcharhinus coatesi) in the Gulf of Papua. Pacific Conservation Biology, 25 (4). pp. 403-412.

MacDonald, Chancey, Bridge, Tom C.L., McMahon, Kelton W., and Jones, Geoffrey P. (2019) Alternative functional strategies and altered carbon pathways facilitate broad depth ranges in coral-obligate reef fishes. Functional Ecology, 33 (10). pp. 1962-1972.

Schwieterman, Gail D., Bouyoucos, Ian A., Potgieter, Kristy, Simpfendorfer, Colin A., Brill, Richard W., and Rummer, Jodie L. (2019) Analysing tropical elasmobranch blood samples in the field: blood stability during storage and validation of the HemoCue (R) haemoglobin analyser. Conservation Physiology, 7 (1).

Harcourt, Robert, Sequeira, Ana M.M., Zhang, Xuelei, Roquet, Fabien, Komatsu, Kosei, Heupel, Michelle, Mcmahon, Clive, Whoriskey, Fred, Meekan, Mark, Carroll, Gemma, Brodie, Stephanie, Simpfendorfer, Colin, Hindell, Mark, Jonsen, Ian, Costa, Daniel P., Block, Barbara, Muelbert, Mônica, Woodward, Bill, Weise, Mike, Aarestrup, Kim, Biuw, Martin, Boehme, Lars, Bograd, Steven J., Cazau, Dorian, Charrassin, Jean Benoit, Cooke, Steven J., Cowley, Paul, de Bruyn, P.J. Nico, Jeanniard du Dot, Tiphaine, Duarte, Carlos, Eguíluz, Víctor M., Ferreira, Luciana C., Fernández-Gracia, Juan, Goetz, Kimberly, Goto, Yusuke, Guinet, Christophe, Hammill, Mike, Hays, Graeme C., Hazen, Elliott, Hückstädt, Luis A., Huveneers, Charlie, Iverson, Sara, Jaaman, Saifullah Arifin, Kittiwattanawong, Kongkiat, Kovacs, Kit M., Lydersen, Christian, Moltmann, Tim, Naruoka, Masaru, Phillips, Lachlan, Picard, Baptiste, Queiroz, Nuno, Reverdin, Gilles, Sato, Katsufumi, Sims, David W., Thorstad, Eva B., Thums, Michele, Treasure, Anne M., Trites, Andrew W., Williams, Guy D., Yonehara, Yoshinari, and Fedak, Mike A. (2019) Animal-borne telemetry: an integral component of the ocean observing toolkit. Frontiers in Marine Science, 6. 326.

Román, M., Fernández, E., Zamborain-Mason, J., and Méndez, G. (2019) Anthropogenic impact on Zostera noltei seagrass meadows (NW Iberian Peninsula) assessed by carbon and nitrogen stable isotopic signatures. Estuaries and Coasts, 42 (4). pp. 987-1000.

Dam, Chinh T.M., Elizur, Abigail, Ventura, Tomer, Salini, Michael, Smullen, Richard, Pirozzi, Igor, and Booth, Mark (2019) Apparent digestibility of raw materials by yellowtail kingfish (Seriola lalandi). Aquaculture, 511. 734233.

Epstein, Hannah E., and Kingsford, Michael J. (2019) Are soft coral habitats unfavourable? A closer look at the association between reef fishes and their habitat. Environmental Biology of Fishes, 102. pp. 479-497.

Robertson, D Ross, Baldwin, Carole C., Bellwood, David, Pyle, Richard, Smith-Vaniz, William, Tornabene, Luke, and Van Tassell, James L. (2019) Aspiration or expiration: hypoxia and the interpretation of fish predation in the fossil record. Palaios, 34 (5). pp. 245-247.

Ebner, Brendan C., Donaldson, James A., Courtney, Robert, Fitzpatrick, Richard, Starrs, Danswell, Fletcher, Cameron S., and Seymour, Jamie (2019) Averting danger under the bridge: video confirms that adult small-toothed morays tolerate salinity before and during tidal influx. Pacific Conservation Biology, 26 (2). pp. 182-189.

Harrison, Hugo B., Álvarez-Noriega, Mariana, Baird, Andrew H., Heron, Scott F., Macdonald, Chancey, and Hughes, Terry P. (2019) Back-to-back coral bleaching events on isolated atolls in the Coral Sea. Coral Reefs, 38 (4). pp. 713-719.

Infante-Villamil, Sandra, Huerlimann, Roger, Condon, Kelly, Maes, Gregory E., and Jerry, Dean R. (2019) Bacterial signatures of productivity decay in Penaeus monodon ponds infected with PirA toxin. Aquaculture, 511. 734202.

Ahasan, Md. Shamim, Kinobe, Robert, Elliott, Lisa, Owens, Leigh, Scott, Jenni, Picard, Jacqueline, Huerlimann, Roger, and Ariel, Ellen (2019) Bacteriophage versus antibiotic therapy on gut bacterial communities of juvenile green turtle, Chelonia mydas. Environmental Microbiology, 21 (8). pp. 2871-2885.

Gan, Han Ming, Tan, Mun Hua, Austin, Christopher M., Sherman, Craig D.H., Wong, Yen Ting, Strugnell, Jan, Gervis, Mark, McPherson, Luke, and Miller, Adam D. (2019) Best foot forward: nanopore long reads, hybrid meta-assembly, and haplotig purging optimizes the first genome assembly for the southern hemisphere blacklip abalone (Haliotis rubra). Frontiers in Genetics, 10. 889.

Brownell, Robert L., Reeves, Randall R., Read, Andrew J., Smith, Brian D., Thomas, Peter O., Ralls, Katherine, Amano, Masao, Berggren, Per, Chit, Aung Myo, Collins, Tim, Currey, Rohan, Dolar, M.Louella L., Genov, Tilen, Hobbs, Roderick C., Kreb, Danielle, Marsh, Helene, Zhigang, Mei, Perrin, Wiliam, Phay, Somany, Rojas-Bracho, Lorenzo, Ryan, Gerry E., Shelden, Kim E. W., Slooten, Elisabeth, Taylor, Barbara L., Vidal, Omar, Ding, Wang, Whitty, Tara S., and Wang, John Y. (2019) Bycatch in gillnet fisheries threatens Critically Endangered small cetaceans and other aquatic megafauna. Endangered Species Research, 40. pp. 285-296.

Grant, Michael I., Kyne, Peter M., Simpfendorfer, Colin A., White, William, and Chin, Andrew (2019) Categorising use patterns of non-marine environments by elasmobranchs and a review of their extinction risk. Reviews in Fish Biology and Fisheries, 29 (3). pp. 1-22.

Wada, Naohisa, Ishimochi, Mizuki, Matsui, Taeko, Pollock, F. Joseph, Tang, Sen-Lin, Ainsworth, Tracy D., Willis, Bette L., Mano, Nobuhiro, and Bourne, David G. (2019) Characterization of coral-associated microbial aggregates (CAMAs) within tissues of the coral Acropora hyacinthus. Scientific Reports, 9. 14662.

Graham, Erin M., Reside, April E., Atkinson, Ian, Baird, Daniel, Hodgson, Lauren, James, Cassandra S., and VanderWal, Jeremy J. (2019) Climate change and biodiversity in Australia: a systematic modelling approach to nationwide species distributions. Australasian Journal of Environmental Management, 26 (2). pp. 112-123.

Komyakova, V., Munday, P.L., and Jones, G.P. (2019) Comparative analysis of habitat use and ontogenetic habitat-shifts among coral reef damselfishes. Environmental Biology of Fishes, 102 (9). pp. 1201-1218.

Brooker, Rohan M., Feeney, William E., Sih, Tiffany L., Ferrari, Maud C.O., and Chivers, Douglas P. (2019) Comparative diversity of anemone-associated fishes and decapod crustaceans in a Belizean coral reef and seagrass system. Marine Biodiversity, 49 (6). pp. 2609-2620.

Caruana, Nikeisha J., Strugnell, Jan M., Faou, Pierre, Finn, Julian, and Cooke, Ira R. (2019) Comparative proteomic analysis of slime from the striped pyjama squid, Sepioloidea lineolata, and the southern bottletail squid, Sepiadarium austrinum (Cephalopoda: Sepiadariidae). Journal of Proteome Research, 18 (3). pp. 890-899.

Foote, Andrew, Simma, David, Khatkar, Mehar, Raadsma, Herman, Guppy, Jarrod, Coman, Gregory, Giardina, Erika, Jerry, Dean, Zenger, Kyall, and Wade, Nicholas (2019) Considerations for maintaining family diversity in commercially mass-spawned penaeid shrimp: a case study on Penaeus monodon. Frontiers in Genetics, 10. 1127.

Bradley, Michael, Baker, Ronald, Nagelkerken, Ivan, and Sheaves, Marcus (2019) Context is more important than habitat type in determining use by juvenile fish. Landscape Ecology, 34. pp. 427-442.

Henderson, Christopher J., Gilby, Ben L., Schlacher, Thomas A., Connolly, Rod M., Sheaves, Marcus, Flint, Nicole, Borland, Hayden P., and Olds, Andrew D. (2019) Contrasting effects of mangroves and armoured shorelines on fish assemblages in tropical estuarine seascapes. ICES Journal of Marine Science, 76 (4). pp. 1052-1061.

Baker, Ronald, Barnett, Adam, Bradley, Michael, Abrantes, Katya, and Sheaves, Marcus (2019) Contrasting seascape use by a coastal fish assemblage: a multi-method approach. Estuaries and Coasts, 42 (1). pp. 292-307.

Bellwood, David R., Pratchett, Morgan S., Morrison, Tiffany H., Gurney, Georgina G., Hughes, Terry P., Álvarez-Romero, Jorge G., Day, Jon C., Grantham, Ruby, Grech, Alana, Hoey, Andrew S., Jones, Geoffrey P., Pandolfi, John M., Tebbett, Sterling B., Techera, Erika, Weeks, Rebecca, and Cumming, Graeme S. (2019) Coral reef conservation in the Anthropocene: confronting spatial mismatches and prioritizing functions. Biological Conservation, 236. pp. 604-615.

Hein, Margaux Y., Birtles, Alastair, Willis, Bette L., Gardiner, Naomi, Beeden, Roger, and Marshall, Nadine A. (2019) Coral restoration: socio-ecological perspectives of benefits and limitations. Biological Conservation, 229. pp. 14-25.

Sivaguru, Mayandi, Fouke, Kyle W., Todorov, Lauren, Kingsford, Michael J., Fouke, Kaitlyn E., Trop, Jeffrey M., and Fouke, Bruce W. (2019) Correction factors for δ 18 O-derived global sea surface temperature reconstructions from diagenetically altered intervals of coral skeletal density banding. Frontiers in Marine Science, 6. 306.

Donaldson, James A., Drews, Paulo, Bradley, Michael, Morgan, David L., Baker, Ronald, and Ebner, Brendan C. (2019) Countering low visibility in video survey of an estuarine fish assemblage. Pacific Conservation Biology, 26 (2). pp. 190-200.

Ritschard, Elena A., Whitelaw, Brooke, Albertin, Caroline B., Cooke, Ira R., Strugnell, Jan M., and Simakov, Oleg (2019) Coupled genomic evolutionary histories as signatures of organismal innovations in Cephalopods co-evolutionary signatures across levels of genome organization may shed light on functional linkage and origin of Cephalopod novelties. BioEssays, 41. 1900073.

McClure, Eva C., Richardson, Laura E., Graba-Landry, Alexia, Loffler, Zoe, Russ, Garry R., and Hoey, Andrew S. (2019) Cross-shelf differences in the response of herbivorous fish assemblages to severe environmental disturbances. Diversity, 11 (2). 23.

Peixoto, Raquel S., Sweet, Michael, and Bourne, David G. (2019) Customized medicine for corals. Frontiers in Marine Science, 6. 686.

Sih, Tiffany L., Daniell, James J., Bridge, Thomas C. L., Beaman, Robin J., Cappo, Mike, and Kingsford, Michael J. (2019) Deep-reef fish communities of the Great Barrier Reef shelf-break: trophic structure and habitat associations. Diversity, 11. 26.

Brandl, Simon J., Tornabene, Luke, Goatley, Christopher H.R., Casey, Jordan M., Morais, Renato A., Côté, Isabelle M., Baldwin, Carole C., Parravicini, Valeriano, Schiettekatte, Nina M.D., and Bellwood, David R. (2019) Demographic dynamics of the smallest marine vertebrates fuel coral reef ecosystem functioning. Science, 364 (6446). pp. 1189-1192.

Taylor, Brett M., Choat, J. Howard, Demartini, Edward E., Hoey, Andrew S., Marshell, Alyssa, Priest, Mark A., Rhodes, Kevin L., and Meekan, Mark G. (2019) Demographic plasticity facilitates ecological and economic resilience in a commercially important reef fish. Journal of Animal Ecology, 88 (12). pp. 1888-1900.

Jarrold, Michael D., and Munday, Philip L. (2019) Diel CO₂ cycles and parental effects have similar benefits to growth of a coral reef fish under ocean acidification. Biology Letters, 15 (2). 20180724.

McCormick, Mark I., Ferrari, Maud C.O., Fakan, Eric P., Barry, Randall P., and Chivers, Douglas P. (2019) Diet cues and their utility for risk assessment in degraded habitats. Animal Behaviour, 152. pp. 19-28.

Chase, Tory J., and Hoogenboom, Mia O. (2019) Differential occupation of available coral hosts by coral-dwelling damselfish (Pomacentridae) on Australia's Great Barrier Reef. Diversity, 11 (11). 219.

Liu, Angela, Pirozzi, Igor, Codabaccus, Basseer, Hines, Barney, Simon, Cedric, Sammut, Jesmond, and Booth, Mark (2019) Digestible choline requirement of juvenile yellowtail kingfish (Seriola lalandi). Aquaculture, 509. pp. 209-220.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2019) Disentangling the effect of host-genotype and environment on the microbiome of the coral Acropora tenuis. PeerJ, 7. e6377.

Woodings, Laura N., Murphy, Nicholas P., Jeffs, Andrew, Suthers, Iain M., Liggins, Geoffrey, and Strugnell, Jan M. (2019) Distribution of Palinuridae and Scyllaridae phyllosoma larvae within the East Australian Current: a climate change hot spot. Marine and Freshwater Research, 70. pp. 1020-1033.

Johnson, Garrett B., Taylor, Brett, Robbins, William D., Franklin, Erik C., Toonen, Rob, Bowen, Brian, and Choat, J. Howard (2019) Diversity and structure of parrotfish assemblages across the northern Great Barrier Reef. Diversity, 11 (1). 14.

Jensen, Sigmund, Hovland, Martin, Lynch, Michael D.J., and Bourne, David G. (2019) Diversity of deep-water coral-associated bacteria and comparison across depth gradients. FEMS Microbiology Ecology, 95 (7). fiz091.

Ramirez Flores, Omar, Birtles, Alastair, Pazmino, Diana, Zenger, Kyall R., and Van Herwerden, Lynne (2019) Dwarf minke whales from the South Pacific share a matrilineal lineage distinct from Balaenoptera acutorostrata acutorostrata and B. a. scammoni. Australian Mammalogy, 41 (2). pp. 231-240.

Riedel, Jendrian, Vucko, Matthew J., Blomberg, Simone P., Robson, Simon K.A., and Schwarzkopf, Lin (2019) Ecological associations among epidermal microstructure and scale characteristics of Australian geckos (Squamata: Carphodactylidae and Diplodactylidae). Journal of Anatomy, 234 (6). pp. 853-874.

Hughes, Terry P., Kerry, James T., Connolly, Sean R., Baird, Andrew H., Eakin, C. Mark, Heron, Scott F., Hoey, Andrew S., Hoogenboom, Mia O., Jacobson, Mizue, Liu, Gang, Pratchett, Morgan S., Skirving, William, and Torda, Gergely (2019) Ecological memory modifies the cumulative impact of recurrent climate extremes. Nature Climate Change, 9 (1). pp. 40-44.

Velu, Chinnathambi, Cirés, Samuel, Brinkman, Diane L., and Heimann, Kirsten (2019) Effect of CO₂ and metal-rich waste water on bioproduct potential of the diazotrophic freshwater cyanobacterium, Tolypothrix sp. Heliyon, 5 (4). e01549.

Liu, Meimei, Wang, Lin, Cheng, Yongxu, Gong, Jie, Zeng, Chaoshu, and Wu, Xugan (2019) Effect of estradiol on hepatopancreatic lipid metabolism in the swimming crab, Portunus trituberculatus. General and Comparative Endocrinology, 280. pp. 115-122.

Budden, Claire, Butler, Ian, Wolfe, Kennedy, Deaker, Dione, Sweatman, Hugh, and Byrne, Maria (2019) Effect of sublethal predation on reproductive output of the crown-of-thorns starfish Acanthaster sp., with an overview of arm damage. Marine Ecology Progress Series, 629. pp. 103-116.

McCormick, Mark I., Fakan, Eric P., Nedelec, Sophie L., and Allan, Bridie J.M. (2019) Effects of boat noise on fish fast-start escape response depend on engine type. Scientific Reports, 9. 6554.

Long, Xiaowen, Wu, Renfu, Wu, Xugan, Hou, Wenjie, Pan, Guiping, Zeng, Chaoshu, and Cheng, Yongxu (2019) Effects of dietary fish oil replacement with blended vegetable oils on growth, lipid metabolism and antioxidant capacity of subadult swimming crab Portunus trituberculatus. Aquaculture Nutrition, 25 (6). pp. 1218-1230.

Crook, Kevin A., Barnett, Adam, Sheaves, Marcus, and Abrantes, Katya (2019) Effects of lipid and urea extraction on stable isotope values (δ¹³C and δ¹⁵N) of two batoids: a call for more species-specific investigations. Limnology and Oceanography: Methods, 17 (11). pp. 565-574.

White, W.T., Baje, L, Simpfendorfer, C.A., Appleyard, S.A., Chin, A., Sabub, B., Rochel, E., and Naylor, G.J.P. (2019) Elasmobranch bycatch in the demersal prawn trawl fishery in the Gulf of Papua, Papua New Guinea. Scientific Reports, 9. 9254.

Hess, Sybille, Allan, Bridie J.M., Hoey, Andrew S., Jarrold, Michael D., Wenger, Amelia S., and Rummer, Jodie L. (2019) Enhanced fast-start performance and anti-predator behaviour in a coral reef fish in response to suspended sediment exposure. Coral Reefs, 38. pp. 103-108.

Jiang, Jufeng, Nuez Ortin, Waldo, Angell, Alex, Zeng, Chaoshu, de Nys, Rocky, and Vucko, Matthew (2019) Enhancing the colouration of the marine ornamental fish Pseudochromis fridmani using natural and synthetic sources of astaxanthin. Algal Research, 42. 101596.

Magnusson, Marie, Glasson, Christopher R.K., Vucko, Matthew J., Angell, Alex, Neoh, Tze Loon, and de Nys, Rocky (2019) Enrichment processes for the production of high-protein feed from the green seaweed Ulva ohnoi. Algal Research, 41. 101555.

Sherley, Richard B., Winker, Henning, Rigby, Cassandra L., Kyne, Peter M., Pollom, Riley, Pacoureau, Nathan, Herman, Katelyn, Carlson, John K., Yin, Jamie S., Kindsvater, Holly K., and Dulvy, Nicholas K. (2019) Estimating IUCN Red List population reduction: JARA-A decision-support tool applied to pelagic sharks. Conservation Letters, 13 (2). e12688.

Bouyoucos, Ian A., Simpfendorfer, Colin A., and Rummer, Jodie L. (2019) Estimating oxygen uptake rates to understand stress in sharks and rays. Reviews in Fish Biology and Fisheries, 29 (2). pp. 297-311.

Berry, Sarah E., Wade, Nicholas, Cedric, Simon, Foote, Andrew, Jerry, Dean R., and Wade, Nicholas M. (2019) Evaluation of baseline haemolymph biochemistry, volume and total body energetics to determine an accurate condition index in the black tiger shrimp, Penaeus monodon. Comparative Biochemistry and Physiology-Part B: biochemistry & molecular biology, 228. pp. 1-9.

Buddle, Alice L., Van Dyke, James U., Thompson, Michael B., Simpfendorfer, Colin A., and Whittington, Camilla M. (2019) Evolution of placentotrophy: using viviparous sharks as a model to understand vertebrate placental evolution. Marine and Freshwater Research, 70 (7). pp. 908-924.

Schlenker, Lela S., Welch, Megan J., Mager, Edward M., Stieglitz, John D., Benetti, Daniel D., Munday, Philip L., and Grosell, Martin (2019) Exposure to crude oil from the deepwater horizon oil spill impairs oil avoidance behavior without affecting olfactory physiology in juvenile Mahi-Mahi (Coryphaena hippurus). Environmental Science and Technology, 53 (23). pp. 14001-14009.

Rueger, Theresa, Harrison, Hugo B., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2019) Extra‐pair mating in a socially monogamous and paternal mouth‐brooding cardinalfish. Molecular Ecology, 28 (10). pp. 2625-2635.

George, Lachlan W., Martins, Ana P.B., Heupel, Michelle R., and Simpfendorfer, Colin A. (2019) Fine-scale movements of juvenile blacktip reef sharks Carcharhinus melanopterus in a shallow nearshore nursery. Marine Ecology Progress Series, 623. pp. 85-97.

Hutson, Kate Suzanne, Vaughan, David Brendan, and Blair, David (2019) First record of a 'fish' blood fluke (Digenea: Aporocotylidae) from a marine mammal: Cardicola dhangali n. sp. International Journal for Parasitology: Parasites and Wildlife, 10. pp. 23-28.

Crowe-Riddell, Jenna M., D'Anastasi, Blanche R., Nankivell, James H., Rasmussen, Arne R., and Sanders, Kate L. (2019) First records of sea snakes (Elapidae: Hydrophiinae) diving to the mesopelagic zone (>200 m). Austral Ecology, 44 (4). pp. 752-754.

Puckridge, Melody, Last, Peter R., Gledhill, Daniel C., and Andreakis, Nikos (2019) From the tropics to the pole and back again: radiation in the flathead fishes (Platycephalidae) across Australia and the Indo-West Pacific. Journal of Biogeography, 46 (4). pp. 680-693.

Mihalitsis, Michalis, and Bellwood, David (2019) Functional implications of dentition-based morphotypes in piscivorous fishes. Royal Society Open Science, 6 (9). 190040.

Kosch, T.A., Silva, C.N.S, Brannelly, L.A., Roberts, A.A., Lau, Q., Marantelli, G., Berger, L., and Skerratt, L.F. (2019) Genetic potential for disease resistance in critically endangered amphibians decimated by chytridiomycosis. Animal Conservation, 22 (3). pp. 238-250.

Kjeldsen, Shannon R., Raadsma, Herman W., Leigh, Kellie A., Tobey, Jennifer R., Phalen, David, Krockenberger, Andrew, Ellis, William A., Hynes, Emily, Higgins, Damien P., and Zenger, Kyall R. (2019) Genomic comparisons reveal biogeographic and anthropogenic impacts in the koala (Phascolarctos cinereus): a dietary-specialist species distributed across heterogeneous environments. Heredity, 122 (5). pp. 525-544.

Mizrahi, Me'ira, Duce, Stephanie, Pressey, Robert L., Simpfendorfer, Colin A., Weeks, Rebecca, and Diedrich, Amy (2019) Global opportunities and challenges for shark large marine protected areas. Biological Conservation, 234. pp. 107-115.

Queiroz, Nuno, Humphries, Nicolas E., Couto, Ana, Vedor, Marisa, da Costa, Ivo, Sequeira, Ana M.M., Mucientes, Gonzalo, Santos, Antonio M., Abascal, Francisco J., Abercrombie, Debra L., Abrantes, Katya, Acuña-Marrero, David, Afonso, André S., Afonso, Pedro, Anders, Darrell, Araujo, Gonzalo, Arauz, Randall, Bach, Pascal, Barnett, Adam, Bernal, Diego, Berumen, Michael L., Lion, Sandra Bessudo, Bezerra, Natalia P.A., Blaison, Antonin V., Block, Barbara A., Bond, Mark E., Bonfil, Ramón, Bradford, Russell W., Braun, Camrin D., Brooks, Edward J., Brooks, Annabelle, Brown, Judith, Bruce, Barry D., Byrne, Michael E., Campana, Steven E., Carlisle, Aaron B., Chapman, Demian D., Chapple, Taylor K., Chisholm, John, Clarke, Christopher R., Clua, Eric G., Cochran, Jesse E.M., Crochelet, Estelle C., Dagorn, Laurent, Daly, Ryan, Cortés, Daniel Devia, Doyle, Thomas K., Drew, Michael, Duffy, Clinton A. J., Erikson, Thor, Espinoza, Eduardo, Ferreira, Luciana C., Ferretti, Francesco, Filmalter, John D., Fischer, G. Chris, Fitzpatrick, Richard, Fontes, Jorge, Forget, Fabien, Fowler, Mark, Francis, Malcolm P., Gallagher, Austin J., Gennari, Enrico, Goldsworthy, Simon D., Gollock, Matthew J., Green, Jonathan R., Gustafson, Johan A., Guttridge, Tristan L., Guzman, Hector M., Hammerschlag, Neil, Harman, Luke, Hazin, Fabio H. V., Heard, Matthew, Hearn, Alex R., Holdsworth, John C., Holmes, Bonnie J., Howey, Lucy A., Hoyos, Mauricio, Hueter, Robert E., Hussey, Nigel E., Huveneers, Charlie, Irion, Dylan T., Jacoby, David M. P., Jewell, Oliver J. D., Johnson, Ryan, Jordan, Lance K. B., Jorgensen, Salvador J., Joyce, Warren, Daly, Clare A. Keating, Ketchum, James T., Klimley, A. Peter, Kock, Alison A., Koen, Pieter, Ladino, Felipe, Lana, Fernanda O., Lea, James S. E., Llewellyn, Fiona, Lyon, Warrick S., MacDonnell, Anna, Macena, Bruno C. L., Marshall, Heather, McAllister, Jaime D., McAuley, Rory, Meyer, Michael A., Morris, John J., Nelson, Emily R., Papastamatiou, Yannis P., Patterson, Toby A., Penaherrera-Palma, Cesar, Pepperell, Julian G., Pierce, Simon J., Poisson, Francois, Quintero, Lina Maria, Richardson, Andrew J., Rogers, Paul J., Rohner, Christoph A., Rowat, David R. L., Samoilys, Melita, Semmens, Jayson M., Sheaves, Marcus, Shillinger, George, Shivji, Mahmood, Singh, Sarika, Skomal, Gregory B., Smale, Malcolm J., Snyders, Laurenne B., Soler, German, Soria, Marc, Stehfest, Kilian M., Stevens, John D., Thorrold, Simon R., Tolotti, Mariana T., Towner, Alison, Travassos, Paulo, Tyminski, John P., Vandeperre, Frederic, Vaudo, Jeremy J., Watanabe, Yuuki Y., Weber, Sam B., Wetherbee, Bradley M., White, Timothy D., Williams, Sean, Zarate, Patricia M., Harcourt, Robert, Hays, Graeme C., Meekan, Mark G., Thums, Michele, Irigoien, Xabier, Eguiluz, Victor M., Duarte, Carlos M., Sousa, Lara L., Simpson, Samantha J., Southall, Emily J., and Sims, David W. (2019) Global spatial risk assessment of sharks under the footprint of fisheries. Nature, 572 (7770). pp. 461-466.

Hughes, Terry P., Kerry, James T., Baird, Andrew H., Connolly, Sean R., Chase, Tory J., Dietzel, Andreas, Hill, Tessa, Hoey, Andrew S., Hoogenboom, Mia O., Jacobson, Mizue, Kerswell, Ailsa, Madin, Joshua S., Mieog, Abbie, Paley, Allison S., Pratchett, Morgan S., Torda, Gergely, and Woods, Rachael M. (2019) Global warming impairs stock-recruitment dynamics of corals. Nature, 568 (7752). pp. 387-401.

McCormick, Mark I., Fakan, Eric P., and Palacios, Maria M. (2019) Habitat degradation and predators have independent trait-mediated effects on prey. Scientific Reports, 9. 15705.

Biscere, T., Zampighi, M., Lorrain, A., Jurriaans, S., Foggo, A., Houlbrèque, F., and Rodolfo-Metalpa, R. (2019) High pCO₂ promotes coral primary production. Biology Letters, 15 (7). 20180777.

Rodríguez-Moreno, Melina, Zapata, Fernando A., Ramírez-Calero, Sandra, van Herwerden, Lynne, and Feldheim, Kevin (2019) Highly polymorphic microsatellite loci for the Acapulco damselfish, Stegastes acapulcoensis, and cross amplification in three congeneric species. Marine Biodiversity, 49 (1). pp. 481-486.

Gray, C.A., Miskiewicz, A.G., Otway, N.M., and Kingsford, M.J. (2019) Historical daytime vertical structure of larval fish assemblages in southeast Australian coastal waters: a benchmark for examining regional ecosystem change. Regional Studies in Marine Science, 29. 100634.

O'Brien, Paul, Webster, Nicole S., Miller, David J., and Bourne, David G. (2019) Host-microbe coevolution: applying evidence from model systems to complex marine invertebrate holobionts. mBio, 10 (1). e02241-18.

Devloo-Delva, Floriaan, Huerlimann, Roger, Chua, Gladys, Matley, Jordan K., Heupel, Michelle R., Simpfendorfer, Colin A., and Maes, Gregory E. (2019) How does marker choice affect your diet analysis: comparing genetic markers and digestion levels for diet metabarcoding of tropical-reef piscivores. Marine and Freshwater Research, 70 (1). MF17209. pp. 8-18.

Barnett, Adam, McAllister, Jamie D., Semmens, Jayson, Abrantes, Kátya, Sheaves, Marcus, and Awruch, Cynthia (2019) Identification of essential habitats: including chimaeras into current shark protected areas. Aquatic Conservation: marine and freshwater ecosystems, 29 (6). pp. 865-880.

Rodgers, G.G., Rummer, J.L., Johnson, L.K., and McCormick, M. (2019) Impacts of increased ocean temperatures on a low-latitude coral reef fish - processes related to oxygen uptake and delivery. Journal of Thermal Biology, 79. pp. 95-102.

Bauer-Civiello, Anne, Critchell, Kay, Hoogenboom, Mia, and Hamann, Mark (2019) Input of plastic debris in an urban tropical river system. Marine Pollution Bulletin, 144. pp. 235-242.

Heupel, Michelle R., Munroe, Samantha E. M., Ledee, Elodie J. I., Chin, Andrew, and Simpfendorfer, Colin A. (2019) Interspecific interactions, movement patterns and habitat use in a diverse coastal shark assemblage. Marine Biology, 166 (6). 68.

Warren, Donald T., and McCormick, Mark I. (2019) Intrageneric differences in the effects of acute temperature exposure on competitive behaviour of damselfishes. PeerJ, 7. e7320.

Pazmiño, Diana A., van Herderden, Lynne, Simpfendorfer, Colin A., Junge, Claudia, Donnellan, Stephen C., Hoyos-Padilla, E. Mauricio, Duffy, Clinton A.J., Huveneers, Charlie, Gillanders, Bronwyn M., Butcher, Paul A., and Maes, Gregory E. (2019) Introgressive hybridisation between two widespread sharks in the east Pacific region. Molecular Phylogenetics and Evolution, 136. pp. 119-127.

Taiarui, Marguerite, Foale, Simon, Bambridge, Tamatoa, and Sheaves, Marcus (2019) Is stock enhancement the best option to manage fisheries? A case study from Taiarapu (French Polynesia). Marine Policy, 104.

Kingsford, Michael J., Welch, David, and O'Callaghan, Mark (2019) Latitudinal and cross-shelf patterns of size, age, growth, and mortality of a tropical damselfish Acanthochromis polyacanthus on the Great Barrier Reef. Diversity, 11 (5). 67.

Scott, Molly E., Heupel, Michelle R., Simpfendorfer, Colin A., Matley, Jordan K., and Pratchett, Morgan S. (2019) Latitudinal and seasonal variation in space use by a large, predatory reef fish, Plectropomus leopardus. Functional Ecology, 33 (4). pp. 670-680.

Jarrold, Michael D., Chakravarti, Leela J., Gibbin, Emma, Christen, Felix, Massamba-N'Siala, Gloria, Blier, Pierre U., and Calosi, Piero (2019) Life-history trade-offs and limitations associated with phenotypic adaptation under future ocean warming and elevated salinity. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1768).

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Mantel, Philippa, Puotinen, Marji, Petus, Caroline, Russ, Garry R., and Williamson, David H. (2019) Long-term dynamics and drivers of coral and macroalgal cover on inshore reefs of the Great Barrier Reef Marine Park. Ecological Applications. e02008.

Barrios-Garrido, Hector, Petit-Rodriguez, Maria Jose, Espinoza-Rodriguez, Ninive, and Wildermann, Natalie (2019) Marine debris and marine turtles in the Venezuelan Guajira Peninsula: a new menace. Marine Turtle Newsletter, 156. pp. 41-43.

Rosado, Phillipe M., Leite, Deborah C.A., Duarte, Gustavo A.S., Chaloub, Ricardo M., Jospin, Guillaume, Nunes da Rocha, Ulisses, Saraiva, João P., Dini-Andreote, Francisco, Eisen, Jonathan A., Bourne, David G., and Peixoto, Raquel S. (2019) Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation. ISME Journal: multidisciplinary journal of microbial ecology, 13. pp. 921-936.

Hopf, Jess K., Jones, Geoffrey P., Williamson, David H., and Connolly, Sean R. (2019) Marine reserves stabilize fish populations and fisheries yields in disturbed coral reef systems. Ecological Applications, 29 (5). e01905.

Praeger, Christina, Vucko, Matthew J., de Nys, Rocky, and Cole, Andrew (2019) Maximising the productivity of the attached cultivation of Ulva tepida in land-based systems. Algal Research, 40. 101507.

McKnight, Donald T., Huerlimann, Roger, Bower, Deborah S., Schwarzkopf, Lin, Alford, Ross A., and Zenger, Kyall R. (2019) Methods for normalizing microbiome data: an ecological perspective. Methods in Ecology and Evolution, 10 (3). pp. 389-400.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., Thomas, Torsten, Schaffelke, Britta, and Webster, Nicole S. (2019) Microbial indicators of environmental perturbations in coral reef ecosystems. Microbiome, 7. 94.

Duncan, Emily M., Broderick, Annette C., Fuller, Wayne J., Galloway, Tamara S., Godfrey, Matthew H., Hamann, Mark, Limpus, Colin J., Lindeque, Penelope K., Mayes, Andrew G., Omeyer, Lucy C.M., Santillo, David, Snape, Robin T.E., and Godley, Brendan J. (2019) Microplastic ingestion ubiquitous in marine turtles. Global Change Biology, 25 (2). pp. 744-752.

Loffler, Zoe, and Hoey, Andrew S. (2019) Microtopographic refuges enhance recruitment and survival, but inhibit growth of propagules of the tropical macroalga Sargassum swartzii. Marine Ecology Progress Series. pp. 61-70.

Nowland, Samantha J., Silva, Catarina N.S., Southgate, Paul C., and Strugnell, Jan M. (2019) Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development. BMC Genomics, 20. 711.

Cooke, Ira, Mead, Oliver, Whalen, Casey, Boote, Chloe, Moya, Aurelie, Ying, Hua, Robbins, Steven, Strugnell, Jan M., Darling, Aaron, Miller, David, Voolstra, Christian, and Adamska, Maya (2019) Molecular techniques and their limitations shape our view of the holobiont. Zoology, 137. 125695.

Mihalitsis, Michalis, and Bellwood, David R. (2019) Morphological and functional diversity of piscivorous fishes on coral reefs. Coral Reefs, 38 (5). pp. 945-954.

Xu, Tian, Zeng, Chaoshu, and Hutson, Kate S. (2019) Morphological descriptions of the larval and first juvenile stages of the decorator crab Camposcia retusa (Latreille, 1829) from laboratory-reared material. Zootaxa, 4577 (2). pp. 295-315.

Espinoza, Mario, Matley, Jordan, Heupel, Michelle R., Tobin, Andrew J., Fisk, Aaron T., and Simpfendorfer, Colin A. (2019) Multi-tissue stable isotope analysis reveals resource partitioning and trophic relationships of large reef-associated predators. Marine Ecology Progress Series, 615. pp. 159-176.

Glasson, Christopher R.K., Donnet, Luke, Angell, Alex, Vucko, Matthew J., Lorbeer, Andrew J., Vamvounis, George, de Nys, Rocky, and Magnusson, Marie (2019) Multiple response optimisation of the aqueous extraction of high quality ulvan from Ulva ohnoi. Bioresource Technology Reports, 7. 100262.

Buerger, P., Weynberg, K.D., Wood-charlson, E.M., Sato, Y., Willis, B.L., and van Oppen, M.J.H. (2019) Novel T4 bacteriophages associated with black band disease in corals. Environmental Microbiology, 21 (6). pp. 1969-1979.

Morris, Luke A., Voolstra, Christian R., Quigley, Kate M., Bourne, David G., and Bay, Line K. (2019) Nutrient availability and metabolism Affect the stability of coral–Symbiodiniaceae symbioses. Trends in Microbiology, 27 (8). pp. 678-689.

Huertas Martin, Victor, and Byrne, Maria (2019) Observation of mass spawning of the sea cucumber Holothuria coluber at Lizard Island, Great Barrier Reef, Australia. SPC Beche-de-mer Information Bulletin, 39. pp. 79-80.

Smith, Hillary A., Moya, Aurelie, Cantin, Neal E., van Oppen, Madeleine J.H., and Torda, Gergely (2019) Observations of simultaneous sperm release and larval planulation suggest reproductive assurance in the coral Pocillopora acuta. Frontiers in Marine Science, 6. 362.

Silva, C.N.S., Macdonald, H.S., Hadfield, M.G., Cryer, M., and Gardner, J.P.A. (2019) Ocean currents predict fine-scale genetic structure and source-sink dynamics in a marine invertebrate coastal fishery. ICES Journal of Marine Science, 76 (4). fsy201. pp. 1007-1018.

Roura, Alvaro, Amor, Michael, Gonzalez, Angel F., Guerra, Angel, Barton, Eric D., and Strugnell, Jan M. (2019) Oceanographic processes shape genetic signatures of planktonic cephalopod paralarvae in two upwelling regions. Progress in Oceanography, 170. pp. 11-27.

Chen, Daming, Liu, Fang, Zhu, Zhihuang, Lin, Qi, Zeng, Chaoshu, and Ye, Haihui (2019) Ontogenetic development of gonads and external sexual characters of the protandric simultaneous hermaphrodite peppermint shrimp, Lysmata vittata (Caridea: Hippolytidae). PLoS ONE, 14 (4). e0215406.

Frommel, Andrea Y., Brauner, Colin J., Allan, Bridie J.M., Nicol, Simon, Parsons, Darren M., Pether, Steve M.J., Setiawan, Alvin N., Smith, Neville, and Munday, Philip L. (2019) Organ health and development in larval kingfish are unaffected by ocean acidification and warming. PeerJ, 7. e8266.

Smith, Olivia M., Cohen, Abigail L., Rieser, Cassandra J., Davis, Alexandra G., Taylor, Joseph M., Adesanya, Adekunle W., Jones, Matthew S., Meier, Amanda R., Reganold, John P., Orpet, Robert J., Northfield, Tobin D., and Crowder, David W. (2019) Organic farming provides reliable environmental benefits but increases variability in crop yields: a global meta-analysis. Frontiers in Sustainable Food Systems, 3. 82.

Trujillo-González, Alejandro, Edmunds, R. C., Becker, J. A., and Hutson, K. S. (2019) Parasite detection in the ornamental fish trade using environmental DNA. Scientific Reports, 9. 5173.

Duong, B., Blomberg, S.P., Cribb, T.H., Cowman, P.F., Kuris, A.M., McCormick, M.I., Warner, R.R., Sun, D., and Grutter, A.S. (2019) Parasites of coral reef fish larvae: its role in the pelagic larval stage. Coral Reefs, 38 (2). pp. 199-214.

Wilson, Julian R., Saunders, Richard J., and Hutson, Kate S. (2019) Parasites of the invasive tilapia Oreochromis mossambicus: evidence for co-introduction. Aquatic Invasions, 14 (2). pp. 332-349.

Gomes, Giana Bastos, Hutson, Kate S., Domingos, Jose A., Infante Villamil, Sandra, Huerlimann, Roger, Miller, Terrence L., and Jerry, Dean (2019) Parasitic protozoan interactions with bacterial microbiome in a tropical fish farm. Aquaculture, 502. pp. 196-201.

Streit, Robert P., Cumming, Graeme S., and Bellwood, David R. (2019) Patchy delivery of functions undermines functional redundancy in a high diversity system. Functional Ecology, 33 (6). pp. 1144-1155.

Dubuc, Alexia, Waltham, Nathan J., Baker, Ronald, Marchand, Cyril, and Sheaves, Marcus (2019) Patterns of fish utilisation in a tropical IndoPacific mangrove-coral seascape, New Caledonia. PLoS ONE, 14 (4). e0207168.

Fraser, Thomas W. K., Witten, P. Eckhard, Albrektsen, Sissel, Breck, Olav, Fontanillas, Roman, Nankervis, Leo, Thomsen, Tårn Helgøy, Koppe, Wolfgang, Sambraus, Florian, and Fjelldal, Per Gunnar (2019) Phosphorus nutrition in farmed Atlantic salmon (Salmo salar): life stage and temperature effects on bone pathologies. Aquaculture, 511. 734246.

Hall, A. E., Vitale, L., and Kingsford, M. J. (2019) Planktonic larval duration, early growth, and the influence of dietary input on the otolith microstructure of Scolopsis bilineatus (Nemipteridae). Environmental Biology of Fishes, 102 (4). pp. 541-552.

Trasvina-Moreno, A.G., Ascencio, F., Angulo, C., Hutson, K.S., Aviles-Quevedo, A., Inohuye-Rivera, R.B., and Perez-Urbiola, J.C. (2019) Plant extracts as a natural treatment against the fish ectoparasite Neobenedenia sp. (Monogenea: Capsalidae). Journal of Helminthology, 93 (1). pp. 57-65.

Rocker, Melissa M., Kenkel, Carly D., Francis, David S., Willis, Bette L., and Bay, Line K. (2019) Plasticity in gene expression and fatty acid profiles of Acropora tenuis reciprocally transplanted between two water quality regimes in the central Great Barrier Reef, Australia. Journal of Experimental Marine Biology and Ecology, 511. pp. 40-53.

Loughnan, Shannon R., Smith-Keune, Carolyn, Beheregaray, Luciano B., Robinson, Nicholas A., and Jerry, Dean R. (2019) Population genetic structure of barramundi (Lates calcarifer) across the natural distribution range in Australia informs fishery management and aquaculture practices. Marine and Freshwater Research, 70. pp. 1533-1542.

D'Alberto, Brooke M., Carlson, John K., Pardo, Sebastián, and Simpfendorfer, Colin A. (2019) Population productivity of shovelnose rays: inferring the potential for recovery. PLoS ONE, 14 (11). e0225183.

Roycroft, Emily J., Le Port, Agnes, and Lavery, Shane D. (2019) Population structure and male-biased dispersal in the short-tail stingray Bathytoshia brevicaudata (Myliobatoidei: Dasyatidae). Conservation Genetics, 20 (4). pp. 717-728.

Wright, Rachel M., Mera, Hanaka, Kenkel, Carly D., Nayfa, Maria, Bay, Line K., and Matz, Mikhail V. (2019) Positive genetic associations among fitness traits support evolvability of a reef-building coral under multiple stressors. Global Change Biology, 25 (10). pp. 3294-3304.

Thorbjørnsen, Susanna Huneide, Moland, Even, Simpfendorfer, Colin, Heupel, Michelle, Knutsen, Halvor, and Olsen, Esben Moland (2019) Potential of a no-take marine reserve to protect home ranges of anadromous brown trout (Salmo trutta). Ecology and Evolution, 9 (1). pp. 417-426.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Malimali, Siola'a, Pressey, Robert L., and Jones, Geoffrey P. (2019) Predicting impact to assess the efficacy of community-based marine reserve design. Conservation Letters, 12 (1). e12602.

Critchell, Kay, Hamann, Mark, Wildermann, Natalie, and Grech, Alana (2019) Predicting the exposure of coastal species to plastic pollution in a complex island archipelago. Environmental Pollution, 252, Part B. pp. 982-991.

Carpentier, Alice S., Berthe, Cécile, Ender, Isabel, Jaine, Fabrice R.A., Mourier, Johann, Stevens, Guy, De Rosemont, Moeava, and Clua, Eric (2019) Preliminary insights into the population characteristics and distribution of reef (Mobula alfredi) and oceanic (M. birostris) manta rays in French Polynesia. Coral Reefs, 38. pp. 1197-1210.

Conde, Brirelys, Alvarado, Mary Cruz, Espinoza-Rodríguez, Nínive, and Barrios-Garrido, Héctor (2019) Primer reporte de coccidiosis en tortugas verdes (Chelonia mydas) del Golfo de Venezuela / First report of coccidiosis in green turtles (Chelonia mydas) from the Gulf of Venezuela. Caldasia, 41 (2). pp. 278-288.

Joyce, K.E., Duce, S., Leahy, S.M., Leon, J., and Maier, S.W. (2019) Principles and practice of acquiring drone-based image data in marine environments. Marine and Freshwater Research, 70 (7). pp. 952-963.

Huang, Huiyang, Huang, Chencui, Guo, Limei, Zeng, Chaoshu, and Ye, Haihui (2019) Profiles of calreticulin and Ca2+ concentration under low temperature and salinity stress in the mud crab, Scylla paramamosain. PLoS One, 14 (7). e0220405.

Pirozzi, Igor, Benito, Marina Rubio, and Booth, Mark (2019) Protein, amino acid and energy utilisation of juvenile Yellowtail Kingfish (Seriola lalandi): quantifying abiotic influences. Aquaculture, 513. 734439.

Latrille, François X., Tebbett, Sterling B., and Bellwood, David R. (2019) Quantifying sediment dynamics on an inshore coral reef: putting algal turfs in perspective. Marine Pollution Bulletin, 141. pp. 404-415.

Arroyo, Francine, Pawlowska, Teresa E., Choat, J. Howard, Clements, Kendall D., and Angert, Esther R. (2019) Recombination contributes to population diversification in the polyploid intestinal symbiont Epulopiscium sp. type B. ISME Journal, 13 (4). pp. 1084-1097.

Pecl, Gretta T., Stuart-Smith, Jemina, Walsh, Peter, Bray, Dianne J., Kusetic, Martha, Burgess, Michael, Frusher, Stewart D., Gledhill, Daniel C., George, Oliver, Jackson, Gary, Keane, John, Martin, Victoria Y., Nursey-Bray, Melissa, Pender, Andrew, Robinson, Lucy M., Rowling, Keith, Sheaves, Marcus, and Moltschaniwskyj, Natalie (2019) Redmap Australia: challenges and successes with a large-scale citizen science-based approach to ecological monitoring and community engagement on climate change. Frontiers in Marine Science, 6. 349.

Pollock, F. Joseph, Lamb, Joleah B., van de Water, Jeroen A. J. M., Smith, Hillary A., Schaffelke, Britta, Willis, Bette L., and Bourne, David G. (2019) Reduced diversity and stability of coral-associated bacterial communities and suppressed immune function precedes disease onset in corals. Royal Society Open Science, 6 (6). 190355.

Heupel, Michelle R., Papastamatiou, Yannis P., Espinoza, Mario, Green, Madeline E., and Simpfendorfer, Colin A. (2019) Reef shark science - key questions and future directions. Frontiers in Marine Science, 6. 12.

Jaspers, Cornelia, Fraune, Sebastian, Arnold, A. Elizabeth, Miller, David J., Bosch, Thomas C.G., Voolstra, Christian R., Adamska, Maja, Ainsworth, Tracy, Ball, Eldon, Boote, Chlöe, Bourne, David, Butterfield, Nicholas J., Chan, Cheong Xin, Cooke, Ira, Cowman, Peter F., Darling, Aaron, Davy, Simon K., Mohamed, Amin, Fabricius, Katharina, Valero Fortunato, Sofia V., Hernandez Agreda, Alejandra, Hoogenboom, Mia, Moya, Aurelie, Pita, Lucia, Ragan, Mark A., Robbins, Steven J., Andrade Rodriguez, Natalia R., Sakamaki, Kazuhiro, Schoepf, Verena, Seemann, Thorsten, Shinzato, Chuya, Stolarski, Jarosław, Strugnell, Jan, Takahashi, Shunichi, Tang, Sen-Lin, Webster, Nicole N, Whitelaw, Brooke, and Ying, Hua (2019) Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches. Zoology, 133. pp. 81-87.

Crosbie, Augustine J., Bridge, Tom C. L., Jones, Geoff, and Baird, Andrew H. (2019) Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology - Progress Series, 622. pp. 93-102.

Lowe, J.R., Williamson, D.H., Ceccarelli, D.M., Evans, R.D., and Russ, G.R. (2019) Responses of coral reef wrasse assemblages to disturbance and marine reserve protection on the Great Barrier Reef. Marine Biology, 166 (9). 119.

Long, Xiaowen, Wu, Xugan, Zhu, Shaicheng, Ye, Haihui, Cheng, Yongxu, and Zeng, Chaoshu (2019) Salinity can change the lipid composition of adult Chinese mitten crab after long-term salinity adaptation. PLoS ONE, 14 (7). e0219260.

Malara, Danilo, Høj, Lone, Oelgemoeller, Michael, Malerba, Martino, Citarrella, Gabriella, and Heimann, Kirsten (2019) Sensitivity of live microalgal aquaculture feed to singlet oxygen-based photodynamic therapy. Journal of Applied Phycology, 31 (6). pp. 3593-3606.

Curnock, Matthew I., Marshall, Nadine, Thiault, Lauric, Heron, Scott F., Hoey, Jessica, Williams, Genevieve, Taylor, Bruce, Pert, Petina L., and Goldberg, Jeremy (2019) Shifts in tourists' sentiments and climate risk perceptions following mass coral bleaching of the Great Barrier Reef. Nature Climate Change, 9 (7). pp. 535-541.

Cinner, J.E., Lau, J.D., Bauman, A.G., Feary, D.A., Januchowski-Hartley, F.A., Rojas, C.A., Barnes, M.L., Bergseth, B.J., Shum, E., Lahari, R., Ben, J., and Graham, N.A.J. (2019) Sixteen years of social and ecological dynamics reveal challenges and opportunities for adaptive management in sustaining the commons. Proceedings of the National Academy of Sciences of the United States of America, 116 (52). pp. 26474-26483.

Diedrich, Amy, Benham, Claudia, Pandihau, Lina, and Sheaves, Marcus (2019) Social capital plays a central role in transitions to sportfishing tourism in small-scale fishing communities in Papua New Guinea. Ambio, 48 (4). pp. 385-396.

Wismer, Sharon, Tebbett, Sterling B., Streit, Robert P., and Bellwood, David R. (2019) Spatial mismatch in fish and coral loss following 2016 mass coral bleaching. Science of the Total Environment, 650. pp. 1487-1498.

Eurich, J.G., Matley, J.K., Baker, R., McCormick, M.I., and Jones, G.P. (2019) Stable isotope analysis reveals trophic diversity and partitioning in territorial damselfishes on a low-latitude coral reef. Marine Biology, 166 (2). 17.

Kanno, Shiori, Schlaff, Audrey M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2019) Stationary video monitoring reveals habitat use of stingrays in mangroves. Marine Ecology - Progress Series, 621. pp. 155-168.

Jones, Andrew T., Lavery, Shane D., Le Port, Agnes, Wang, You Gan, Blower, Dean, and Ovenden, Jennifer (2019) Sweepstakes reproductive success is absent in a New Zealand snapper (Chrysophrus auratus) population protected from fishing despite "tiny" Ne/N ratios elsewhere. Molecular Ecology, 28 (12). pp. 2986-2995.

Ramsby, Blake D., and Goulet, Tamar L. (2019) Symbiosis and host morphological variation: Symbiodiniaceae photosynthesis in the octocoral Briareum asbestinum at ambient and elevated temperatures. Coral Reefs, 38. pp. 359-371.

Morse, Peter, and Huffard, Christine L. (2019) Tactical tentacles: new insights on the processes of sexual selection among the Cephalopoda. Frontiers in Physiology, 10. 1035.

Schmidt, Katrin, Pearson, Richard G., Alford, Ross A., and Puschendorf, Robert (2019) Tadpole species have variable roles in litter breakdown, sediment removal, and nutrient cycling in a tropical stream. Freshwater science, 38 (1). pp. 103-112.

Liu, Meimei, Feng, Qiangmei, Francis, David S., Turchini, Giovanni M., Zeng, Chaoshu, and Wu, Xugan (2019) Tamoxifen affects the histology and hepatopancreatic lipid metabolism of swimming crab Portunus trituberculatus. Aquatic Toxicology, 213. 105220.

Trujillo-Gonzalez, Alejandro, and Militz, Thane A. (2019) Taxonomically constrained reporting framework limits biodiversity data for aquarium fish imports to Australia. Wildlife Research, 46 (4). pp. 355-363.

Rocker, Melissa M., Francis, David S., Fabricius, Katharina E., Willis, Bette L., and Bay, Line K. (2019) Temporal and spatial variation in fatty acid composition in Acropora tenuis corals along water quality gradients on the Great Barrier Reef, Australia. Coral Reefs, 38 (2). pp. 215-228.

Epstein, Hannah E., Smith, Hillary A., Cantin, Neal E., Mocellin, Veronique J. L., Torda, Gergely, and van Oppen, Madeleine J. H. (2019) Temporal variation in the microbiome of Acropora coral species does not reflect seasonality. Frontiers In Microbiology, 10. 1775.

Munday, Philip L., Schunter, Celia, Allan, Bridie M.J., Nicol, Simon, Pether, Stephen M.J., Pope, Stephen, Ravasi, Timothy, Setiawan, Alvin N., Smith, Neville, and Domingos, Jose A. (2019) Testing the adaptive potential of yellowtail kingfish to ocean warming and acidification. Frontiers in Ecology and Evolution, 7. 253.

Chakravarti, Leela J., Negri, Andrew P., and van Oppen, Madeleine J.H. (2019) Thermal and herbicide tolerances of chromerid algae and their ability to form a symbiosis with corals. Frontiers In Microbiology, 10. 173.

Jurriaans, S., and Hoogenboom, M.O. (2019) Thermal performance of scleractinian corals along a latitudinal gradient on the Great Barrier Reef. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1778). 20180546.

Aguilar, Catalina, Raina, Jean-Baptiste, Fôret, Sylvain, Hayward, David C., Lapeyre, Bruno, Bourne, David G., and Miller, David J. (2019) Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress. BMC Genomics, 20. 148.

Quigley, Kate M., Willis, Bette L., and Kenkel, Carly (2019) Transgenerational inheritance of shuffled symbiont communities in the coral Montipora digitata. Scientific Reports, 9. 13328.

Hays, Graeme C., Bailey, Helen, Bograd, Steven J., Bowen, W. Don, Campagna, Claudio, Carmichael, Ruth H., Casale, Paolo, Chiaradia, André, Costa, Daniel P., Cuevas, Eduardo, de Bruyn, P. J. Nico, Dias, Maria P., Duarte, Carlos M., Dunn, Daniel C., Dutton, Peter H., Esteban, Nicole, Friedlaender, Ari, Goetz, Kimberly T., Godley, Brendan J., Halpin, Patrick N., Hamann, Mark, Hammerschlag, Neil, Harcourt, Robert, Harrison, Autumn-Lynn, Hazen, Elliott L., Heupel, Michelle R., Hoyt, Erich, Humphries, Nicolas E., Kot, Connie Y., Lea, James S. E., Marsh, Helene, Maxwell, Sara M., McMahon, Clive R., di Sciara, Giuseppe Notarbartolo, Palacios, Daniel M., Phillips, Richard A., Righton, David, Schofield, Gail, Seminoff, Jeffrey A., Simpfendorfer, Colin A., Sims, David W., Takahashi, Akinori, Tetley, Michael J., Thums, Michele, Trathan, Philip N., Villegas-Amtmann, Stella, Wells, Randall S., Whiting, Scott D., Wildermann, Natalie E., and Sequeira, Ana M. M. (2019) Translating marine animal tacking data into conservation policy and management. Trends in Ecology and Evolution, 34 (5). pp. 459-473.

Bierwagen, Stacy L., Pethybridge, Heidi, Heupel, Michelle R., Chin, Andrew, and Simpfendorfer, Colin A. (2019) Trophic niches determined from fatty acid profiles of sympatric coral reef mesopredators. Marine Ecology Progress Series, 632. pp. 159-174.

Kidgell, Joel T., Magnusson, Marie, de Nys, Rocky, and Glasson, Christopher R.K. (2019) Ulvan: a systematic review of extraction, composition and function. Algal Research, 39. 101422.

Brodnicke, O. B., Bourne, D. G., Heron, S. F., Pears, R. J., Stella, J. S., Smith, H. A., and Willis, B. L. (2019) Unravelling the links between heat stress, bleaching and disease: fate of tabular corals following a combined disease and bleaching event. Coral Reefs, 38. pp. 591-603.

Cooper, Amanda M., MacDonald, Chancey, Roberts, T. Edward, and Bridge, Tom C.L. (2019) Variability in the functional composition of coral reef fish communities on submerged and emergent reefs in the central Great Barrier Reef, Australia. PLoS ONE, 14 (5). e0216785.

Rohde, Barukh B., Staunton, Kyran M., Zeak, Nicholas C., Beebe, Nigel, Snoad, Nigel, Bondarenco, Artiom, Liddington, Catherine, Anderson, Jason A., Xiang, Wei, Mankin, Richard W., and Ritchie, Scott A. (2019) Waterproof, low-cost, long-battery-life sound trap for surveillance of male Aedes aegypti for rear-and-release mosquito control programmes. Parasites & Vectors, 12. 417.

Hill, Erin, Linacre, Adrian, Toop, Simon, Murphy, Nicholas, and Strugnell, Jan (2019) Widespread hybridization in the introduced hog deer population of Victoria, Australia, and its implications for conservation. Ecology and Evolution, 9 (18). pp. 10828-10842.

Wismer, Sharon, Tebbett, Sterling B., Streit, Robert P., and Bellwood, David R. (2019) Young fishes persist despite coral loss on the Great Barrier Reef. Communications Biology, 2. 456.

Ferrari, Maud, Warren, Donald T., McCormick, Mark I., and Chivers, Douglas P. (2019) The cost of carryover effects in a changing environment: context-dependent benefits of a behavioural phenotype in a coral reef fish. Animal Behaviour, 149. pp. 1-5.

Whitelaw, Brooke L., Cooke, Ira R., Finn, Julian, Zenger, Kyall, and Strugnell, J.M. (2019) The evolution and origin of tetrodotoxin acquisition in the blue-ringed octopus (genus Hapalochlaena). Aquatic Toxicology, 206. pp. 114-122.

Miller, Rachel, Marsh, Helene, Benham, Claudia, and Hamann, Mark (2019) A framework for improving the cross-jurisdictional governance of a marine migratory species. Conservation Science and Practice, 1 (8). e58.

Hua, Katheline, Cobcroft, Jennifer M., Cole, Andrew, Condon, Kelly, Jerry, Dean R., Mangott, Arnold, Praeger, Christina, Vucko, Matthew J., Zeng, Chaoshu, Zenger, Kyall, and Strugnell, Jan M. (2019) The future of aquatic protein: implications for protein sources in aquaculture diets. One Earth, 1 (3). pp. 316-329.

Robbins, Steven J., Singleton, Caitlin M., Chan, Cheong Xin, Messer, Lauren F., Geers, Aileen U., Ying, Hua, Baker, Alexander, Bell, Sara C., Morrow, Kathleen M., Ragan, Mark A., Miller, David J., Forêt, Sylvain, Voolstra, Christian R., Tyson, Gene W., Bourne, David G., Ball, Eldon, Beeden, Roger, Berumen, Michael, Aranda, Manuel, Ravasi, Timothy, Bongaerts, Pim, Hoegh-Guldberg, Ove, Cooke, Ira, Leggat, Bill, Sprungala, Susanne, Fitzgerald, Anna, Shang, Catherine, Lundgren, Petra, Fyffe, Theresa, Rubino, Francesco, van Oppen, Madeleine, Weynberg, Karen, and Bells, Sara C. (2019) A genomic view of the reef-building coral Porites lutea and its microbial symbionts. Nature Microbiology, 4 (12). pp. 2090-2100.

Knudsen, Steen Wilhelm, Choat, J. Howard, and Clements, Kendall D. (2019) The herbivorous fish family Kyphosidae (Teleostei: Perciformes) represents a recent radiation from higher latitudes. Journal of Biogeography, 46 (9). pp. 2067-2080.

Gonzalez-Murcia, Saul, Álvarez-Calderón, Francisco Samuel, Alvarado-Larios, Raquel, Marín-Martínez, Cindy Marlene, and Angulo, Arturo (2019) The ichthyology collection at the Natural History Museum of El Salvador (MUHNES): species checklist and new country records. Zootaxa, 4559 (2). pp. 281-313.

Marchese, Gioele, Fitzgibbon, Quinn P., Trotter, Andrew J., Carter, Chris G., Jones, Clive M., and Smith, Gregory G. (2019) The influence of flesh ingredients format and krill meal on growth and feeding behaviour of juvenile tropical spiny lobster Panulirus ornatus. Aquaculture, 499. pp. 128-139.

Mattone, Carlo, and Sheaves, Marcus (2019) The intertidal benthic community of mangrove dominated estuaries: the ecological implications of a decoupled habitat. ICES Journal of Marine Science, 76 (7). pp. 2329-2337.

Barton, Jonathan A., Hutson, Kate S., Bourne, David G., Humphrey, Craig, Dybala, Cat, and Rawlinson, Kate A. (2019) The life cycle of the Acropora coral-eating flatworm (AEFW), Prosthiostomum acroporae; the influence of temperature and management guidelines. Frontiers in Marine Science, 6. 524.

Tan, Cheryl K.Y., Cowley, Jeff A., and Jerry, Dean R. (2019) A magnetic bead-based DNA extraction protocol suitable for high-throughput genotyping in shrimp breeding programs. Genetics of Aquatic Organisms, 3 (2). pp. 47-56.

McKnight, Donald T., Huerlimann, Roger, Bower, Deborah S., Schwarzkopf, Lin, Alford, Ross A., and Zenger, Kyall R. (2019) microDecon: a highly accurate read‐subtraction tool for the post‐sequencing removal of contamination in metabarcoding studies. Environmental DNA, 1 (1). pp. 14-25.

West, Annie G., Waite, David W., Deines, Peter, Bourne, David G., Digby, Andrew, McKenzie, Valerie J., and Taylor, Michael W. (2019) The microbiome in threatened species conservation. Biological Conservation, 229. pp. 85-98.

Crandall, Eric D., Riginos, Cynthia, Bird, Chris E., Liggins, Libby, Treml, Eric, Beger, Maria, Barber, Paul H., Connolly, Sean R., Cowman, Peter F., Dibattista, Joseph D., Eble, Jeff A., Magnuson, Sharon F., Horne, John B., Kochzius, M, Lessios, Harilaos A., Liu, Shang Yin Vanson, Ludt, William B., Madduppa, Hawis, Pandolfi, John M., Toonen, Robert J., Diversity of the Indo‐Pacific Network, and Gaither, Michelle R. (2019) The molecular biogeography of the Indo-Pacific: testing hypotheses with multispecies genetic patterns. Global Ecology and Biogeography, 28 (7). pp. 943-960.

Laubenstein, Taryn D., Rummer, Jodie L., McCormick, Mark I., and Munday, Philip L. (2019) A negative correlation between behavioural and physiological performance under ocean acidification and warming. Scientific Reports, 9. 4265.

Liu, An, Liu, Jing, Chen, Xuelei, Lu, Bei, Zeng, Chaoshu, and Ye, Haihui (2019) A novel crustacean hyperglycemic hormone (CHH) from the mud crab Scylla paramamosain regulating carbohydrate metabolism. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 231. pp. 49-55.

McKnight, Donald T., Lal, Monal M., Bower, Deborah S., Schwarzkopf, Lin, Alford, Ross A., and Zenger, Kyall R. (2019) The return of the frogs: the importance of habitat refugia in maintaining diversity during a disease outbreak. Molecular Ecology, 28 (11). pp. 2731-2745.

Bellwood, David R., Schultz, Ortwin, Siqueira Correa, Alexandre C., and Cowman, Peter F. (2019) A review of the fossil record of the Labridae. Annalen des Naturhistorischen Museums in Wien, Serie A, 121. pp. 125-193.

Chin, Andrew, Baje, Leontine, Donaldson, Terrance, Gerhardt, Karin, Jabado, Rima W., Kyne, Peter M., Mana, Ralph, Mescam, Gauthier, Mourier, Johann, Planes, Serge, and Wen, Colin (2019) The scientist abroad: maximising research impact and effectiveness when working as a visiting scientist. Biological Conservation, 238. 108231.

Zarrella, Ilaria, Herten, Koen, Maes, Gregory E., Tai, Shuaishuai, Yang, Ming, Seuntjens, Eve, Ritschard, Elena A., Zach, Michael, Styfhals, Ruth, Sanges, Remo, Simakov, Oleg, Ponte, Giovanna, and Fiorito, Graziano (2019) The survey and reference assisted assembly of the Octopus vulgaris genome. Scientific Data, 6. 13.

Konovalov, Dmitry A., Saleh, Alzayat, Domingos, Jose A., White, Ron D., and Jerry, Dean R. (2018) Estimating mass of harvested Asian seabass Lates calcarifer from images. World Journal of Engineering and Technology, 6 (3). pp. 15-23.

Abrantes, Kátya G., Brunnschweiler, Juerg M., and Barnett, Adam (2018) You are what you eat: examining the effects of provisioning tourism on shark diets. Biological Conservation, 224. pp. 300-308.

Eurich, Jacob G., Shomaker, Simone M., McCormick, Mark I., and Jones, Geoffrey P. (2018) Experimental evaluation of the effect of a territorial damselfish on foraging behaviour of roving herbivores on coral reefs. Journal of Experimental Marine Biology and Ecology, 506. pp. 155-162.

Álvarez Noriega, Mariana, Baird, Andrew H., Dornelas, Maria, Madin, Joshua, and Connolly, Sean R. (2018) Negligible effect of competition on coral colony growth. Ecology, 99 (6). pp. 1347-1356.

Konovalov, Dmitry A., Hillcoat, Suzanne, Williams, Genevieve, Birtles, R. Alastair, Gardiner, Naomi, and Curnock, Matthew I. (2018) Individual minke whale recognition using deep learning convolutional neural networks. Journal of Geoscience and Environment Protection, 6 (5). 84616. pp. 25-36.

Rodgers, G.G., Donelson, J.M., McCormick, M.I., and Munday, P.L. (2018) In hot water: sustained ocean warming reduces survival of a low-latitude coral reef fish. Marine Biology, 165. 73.

Nicolet, K.J., Hoogenboom, M.O., Pratchett, M.S., and Willis, B.L. (2018) Selective feeding by corallivorous fishes neither promotes nor reduces progression rates of black band disease. Marine Ecology Progress Series, 594. pp. 95-106.

Nicolet, K.J., Chong-Seng, K.M., Pratchett, M.S., Willis, B.L., and Hoogenboom, M.O. (2018) Predation scars may influence host susceptibility to pathogens: evaluating the role of corallivores as vectors of coral disease. Scientific Reports, 8. 5258.

Praeger, Christina, and de Nys, Rocky (2018) Improvement of the seeding of filamentous Ulva tepida on free-floating surfaces. Algal Research, 30. pp. 73-78.

Schlaefer, Jodie A., Wolanski, Eric, and Kingsford, Michael J. (2018) Swimming behaviour can maintain localised jellyfish (Chironex fleckeri: Cubozoa) populations. Marine Ecology Progress Series, 591. pp. 287-302.

Infante Villamil, Sandra, Huerlimann, Roger, Morianos, Christina, Sarnyai, Zoltan, and Maes, Gregory E. (2018) Adverse effect of early life high-fat/high-carbohydrate ('Western') diet on bacterial community in the distal bowel of mice. Nutrition Research, 50. pp. 25-36.

Brunnschweiler, J.M., Payne, N.L., and Barnett, A. (2018) Hand feeding can periodically fuel a major portion of bull shark energy requirements at a provisioning site in Fiji. Animal Conservation, 21 (1). pp. 31-35.

Brazenor, Alexander K., Saunders, Richard J., Miller, Terrance L., and Hutson, Kate S. (2018) Morphological variation in the cosmopolitan fish parasite Neobenedenia girellae (Capsalidae: Monogenea). International Journal for Parasitology, 48 (2). pp. 125-134.

Eurich, J.G., McCormick, M.I., and Jones, G.P. (2018) Habitat selection and aggression as determinants of fine-scale partitioning of coral reef zones in a guild of territorial damselfishes. Marine Ecology Progress Series, 587. pp. 201-215.

Long, Xiaowen, Wu, Xugan, Zhao, Lei, Ye, Haihui, Cheng, Yongxu, and Zeng, Chaoshu (2018) Physiological responses and ovarian development of female Chinese mitten crab Eriocheir sinensis subjected to different salinity conditions. Frontiers in Physiology, 8. 1072.

DeMartini, Edward E., Andrews, Allen H., Howard, Kathrine G., Taylor, Brett M., Lou, Dong-Chun, and Donovan, Mary K. (2018) Comparative growth, age at maturity and sex change, and longevity of hawaiian parrotfishes, with bomb radiocarbon validation. Canadian Journal of Fisheries and Aquatic Sciences, 75 (4). pp. 580-589.

Bergseth, Brock J., Gurney, Georgina G., Barnes, Michele L., Arias, Adrian, and Cinner, Joshua E. (2018) Addressing poaching in marine protected areas through voluntary surveillance and enforcement. Nature Sustainability, 1. pp. 421-426.

Ron, Santiago R., Duellman, William E., Caminer, Marcel A., and Pazmino, Diana (2018) Advertisement calls and DNA sequences reveal a new species of Scinax (Anura: Hylidae) on the Pacific lowlands of Ecuador. PLoS ONE, 13 (9). e0203169.

Baje, Leontine, Smart, Jonathan J., Chin, Andrew, White, William T., and Simpfendorfer, Colin A. (2018) Age, growth and maturity of the Australian sharpnose shark Rhizoprionodon taylori from the Gulf of Papua. PLoS ONE, 13 (10). e0206581.

Martins, Ana Paula Barbosa, Feitosa, Leonardo Manir, Lessa, Rosangela Paula, Almeida, Zafira Silva, Heupel, Michelle, Silva, Wagner Macedo, Tchaicka, Ligia, and Silva Nunes, Jorge Luiz (2018) Analysis of the supply chain and conservation status of sharks (Elasmobranchii: Superorder Selachimorpha) based on fisher knowledge. PLoS One, 13 (3).

van de Water, Jeroen A.J.M., Chaib de Mares, Maryam, Dixon, Groves B., Raina, Jean-Baptiste, Willis, Bette L., Bourne, David G., and van Oppen, Madeleine J.H. (2018) Antimicrobial and stress responses to increased temperature and bacterial pathogen challenge in the holobiont of a reef-building coral. Molecular Ecology, 27 (4). pp. 1065-1080.

Gallagher, Austin J., Papastamatiou, Yannis P., and Barnett, Adam (2018) Apex predatory sharks and crocodiles simultaneously scavenge a whale carcass. Journal of Ethology, 36 (2). pp. 205-209.

Hutson, Kate, Cable, Joanne, Grutter, Alexandra S., Paziewska-Harris, Anna, and Barber, Iain (2018) Aquatic parasite cultures and their applications. Trends in Parasitology, 34 (12). pp. 1082-1096.

Sherman, C. Samantha, Chin, Andrew, Heupel, Michelle R., and Simpfendorfer, Colin A. (2018) Are we underestimating elasmobranch abundances on baited remote underwater video systems (BRUVS) using traditional metrics? Journal of Experimental Marine Biology and Ecology, 503. pp. 80-85.

Li, Xixi, Norman, Hayley C., Kinley, Robert D., Laurence, Michael, Wilmot, Matt, Bender, Hannah, de Nys, Rocky, and Tomkins, Nigel (2018) Asparagopsis taxiformis decreases enteric methane production from sheep. Animal Production Science, 58 (4). pp. 681-688.

Zanolla, Marianela, Altamirano, María, Carmona, Raquel, De la Rosa, Julio, Souza-Egipsy, Virginia, Sherwood, Alison, Tsiamis, Konstantinos, Barbosa, Ana Márcia, Muñoz, Antonio Román, and Andreakis, Nikos (2018) Assessing global range expansion in a cryptic species complex: insights from the red seaweed genus Asparagopsis (Florideophyceae). Journal of Phycology, 54 (1). pp. 12-24.

Steneck, Robert S., Mumby, Peter J., MacDonald, Chancey, Rasher, Douglas B., and Stoyle, George (2018) Attenuating effects of ecosystem management on coral reefs. Science Advances, 4 (5). eaao5493.

Hoenner, Xavier, Huveneers, Charlie, Streckenreuter, Andre, Simpfendorfer, Colin, Tattersall, Katherine, Jaine, Fabrice, Atkins, Natalia, Babcock, Russ, Brodie, Stephanie, Burgess, Jonathan, Campbell, Hamish, Heupel, Michelle, Pasquer, Benedicte, Proctor, Roger, Taylor, Matthew D., Udyawer, Vinay, and Harcourt, Robert (2018) Australia's continental-scale acoustic tracking database and its automated quality control process. Scientific Data, 5. 170206.

Martins, A.P.B, Heupel, M. R., Chin, A., and Simpfendorfer, C. A. (2018) Batoid nurseries: definition, use and importance. Marine Ecology - Progress Series, 595. pp. 253-267.

McCormick, Mark I., Fakan, Eric, and Allan, Bridie J.M. (2018) Behavioural measures determine survivorship within the hierarchy of whole-organism phenotypic traits. Functional Ecology, 32 (4). pp. 958-969.

Cramp, Jessica E., Simpfendorfer, Colin A., and Pressey, Robert L. (2018) Beware silent waning of shark protection. Science, 360 (6390). p. 723.

Tan, C.H, Pratchett, M.S., Bay, L.K., Graham, E.M., and Baird, A.H. (2018) Biennium horribile: very high mortality in the reef coral Acropora millepora on the Great Barrier Reef in 2009 and 2010. Marine Ecology Progress Series, 604. pp. 133-142.

Miller, Terrence L., Barnett, Samantha, Seymour, Jamie E., Jenkins, Timothy P., McNamara, Marissa, and Adlard, Robert D. (2018) Biliary tract-infecting myxosporeans from estuarine and reef stonefish (Scorpaeniformes: Synanceiidae) off eastern Australia, with descriptions of Sphaeromyxa horrida n. sp. and Myxidium lapipiscis n. sp. (Myxosporea: Bivalvulida). Journal of Parasitology, 104 (3). pp. 254-261.

Marshall, Dustin J., Lawton, Rebecca J., Monro, Keyne, and Paul, Nicholas A. (2018) Biochemical evolution in response to intensive harvesting in algae: evolution of quality and quantity. Evolutionary Applications, 11 (8). pp. 1389-1400.

Hemingson, Christopher R., and Bellwood, David R. (2018) Biogeographic patterns in major marine realms: function not taxonomy unites fish assemblages in reef, seagrass and mangrove systems. Ecography, 41 (1). pp. 174-182.

McWilliam, Mike, Hoogenboom, Mia O., Baird, Andrew H., Kuo, Chao-Yang, Madin, Joshua S., and Hughes, Terry P. (2018) Biogeographical disparity in the functional diversity and redundancy of corals. Proceedings of the National Academy of Sciences of the United States of America, 115 (12). pp. 3084-3089.

Roberts, David A., Shiels, Laura, Tickle, Julian, de Nys, Rocky, and Paul, Nicholas A. (2018) Bioremediation of aluminium from the waste water of a conventional water treatment plant using the freshwater macroalga Oedogonium. Water, 10 (5). 626.

McCormick, Mark I., Allan, Bridie J.M., Harding, Harry, and Simpson, Stephen D. (2018) Boat noise impacts risk assessment in a coral reef fish but effects depend on engine type. Scientific Reports, 8. 3847.

Ensor, J.E., Park, S.E., Attwood, S.J., Kaminski, A.M., and Johnson, J.E. (2018) Can community-based adaptation increase resilience? Climate and Development Journal, 10 (2). pp. 134-151.

George, Anita Mary, Brodie, Jon, Daniell, James, Capper, Angela, and Jonker, Michelle (2018) Can sponge morphologies act as environmental proxies to biophysical factors in the Great Barrier Reef, Australia? Ecological Indicators, 93. pp. 1152-1162.

Schiel, David R., Ayling, Tony, Kingsford, Michael J., Battershill, Christopher N., Choat, J. Howard, Andrew, Neil L., Clements, Kendall D., Ayling, Avril L., Leum, Linda L., Poynter, Mark, and Jones, Geoffrey P. (2018) Change in the rocky reef fish fauna of the iconic Poor Knights Islands Marine Reserve in north-eastern New Zealand over 4 decades. Marine and Freshwater Research, 69 (10). pp. 1496-1507.

Genodepa, Jerome G., Zeng, Chaoshu, and Southgate, Paul C. (2018) Changes in digestive enzyme activities and nutrient utilization during embryonic development and starvation of newly hatched larvae of the mud crab, Scylla serrata. Aquaculture, 493. pp. 137-143.

Vaughan, David B., Grutter, Alexandra S., and Hutson, Kate S. (2018) Cleaner shrimp are a sustainable option to treat parasitic disease in farmed fish. Scientific Reports, 8. 13959. pp. 1-10.

Vaughan, David B., Grutter, Alexandra S., Ferguson, Hugh W., Jones, Rhondda, and Hutson, Kate S. (2018) Cleaner shrimp are true cleaners of injured fish. Marine Biology, 165. 118.

Vaughan, David B., Grutter, Alexandra S., and Hutson, Kate S. (2018) Cleaner shrimp remove parasite eggs on fish cages. Aquaculture Environment Interactions, 10. pp. 429-436.

Jones, Karina, Jensen, Michael, Burgess, Graham, Leonhardt, Johanna, van Herwerden, Lynne, Hazel, Julia, Hamann, Mark, Bell, Ian, and Ariel, Ellen (2018) Closing the gap: mixed stock analysis of three foraging populations of green turtles (Chelonia mydas) on the Great Barrier Reef. PeerJ, 6. 5651.

Payne, Nicholas L., Meyer, Carl G., Smith, James A., Houghton, Jonathan D.R., Barnett, Adam, Holmes, Bonnie J., Nakamura, Itsumi, Papastamatiou, Yannis P., Royer, Mark A., Coffey, Daniel M., Anderson, James M., Hutchinson, Melanie R., Sato, Katsufumi, and Halsey, Lewis G. (2018) Combining abundance and performance data reveals how temperature regulates coastal occurrences and activity of a roaming apex predator. Global Change Biology, 24 (5). pp. 1884-1893.

Ahasan, Md. Shamim, Waltzek, Thomas, Huerlimann, Roger, and Ariel, Ellen (2018) Comparative analysis of gut bacterial communities of green turtles (Chelonia mydas) pre-hospitalization and post-rehabilitation by high-throughput sequencing of bacterial 16S rRNA gene. Microbiological Research, 207. pp. 91-99.

Chen, Zhigang, Wang, Guizhong, Zeng, Chaoshu, and Wu, Lisheng (2018) Comparative study on the effects of two diatoms as diets on planktonic calanoid and benthic harpacticoid copepods. Journal of Experimental Zoology, Part A, 329 (3). pp. 140-148.

Blake, Denise F., Crowe, Melissa, Lindsay, Daniel, Brouff, Annie, Mitchell, Simon J., and Pollock, Neal W. (2018) Comparison of tissue oxygenation achieved breathing oxygen from a demand valve with four different mask configurations. Diving and Hyperbaric Medicine, 48 (4). pp. 209-217.

Hagihara, Rie, Jones, Rhondda E., Sobtzick, Susan, Cleguer, Christophe, Garrigue, Claire, and Marsh, Helene (2018) Compensating for geographic variation in detection probability with water depth improves abundance estimates of coastal marine megafauna. PLoS ONE, 13 (1).

Brodie, Stephanie, Lédée, Elodie J.I., Heupel, Michelle R., Babcock, Russell C., Campbell, Hamish A., Gledhill, Daniel C., Hoenner, Xavier, Huveneers, Charlie, Jaine, Fabrice R.A., Simpfendorfer, Colin A., Taylor, Matthew D., Udyawer, Vinay, and Harcourt, Robert G. (2018) Continental-scale animal tracking reveals functional movement classes across marine taxa. Scientific Reports, 8. 3717.

Ma, Ka Yan, van Herwerden, Lynne, Newman, Stephen J., Berumen, Michael L., Choat, John Howard, Chu, Ka Hou, and de Mitcheson, Yvonne Sadovy (2018) Contrasting population genetic structure in three aggregating groupers (Percoidei: Epinephelidae) in the Indo-West Pacific: the importance of reproductive mode. BMC Evolutionary Biology, 18. 180.

Palmer, Caroline V., and Baird, Andrew H. (2018) Coral tumor-like growth anomalies induce an immune response and reduce fecundity. Diseases of Aquatic Organisms, 130 (1). pp. 77-81.

Pollock, F. Joseph, McMinds, Ryan, Smith, Styles, Bourne, David G., Willis, Bette L., Medina, Mónica, Thurber, Rebecca Vega, and Zaneveld, Jesse R. (2018) Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. Nature Communications, 9. 4921. pp. 1-13.

Chase, T.J., Pratchett, M.S., Frank, G.E., and Hoogenboom, M.O. (2018) Coral-dwelling fish moderate bleaching susceptibility of coral hosts. PLoS One, 13 (12). e0208545.

Gutt, J., Isla, E., Bertler, A.N., Bodeker, G.E., Bracegirdle, T.J., Cavanagh, R.D., Comiso, J.C., Convey, P., Cummings, V., De Conto, R., De Master, D., di Prisco, G., d'Ovidio, F., Griffiths, H.J., Khan, A.L., Lopez-Martinez, J., Murray, A.E., Nielsen, U.N., Ott, S, Post, A., Ropert-Coudert, Y., Saucede, T., Scherer, R., Schiaparelli, S., Scholss, I.R., Smith, C.R., Stefels, J., Steven, C., Strugnell, J.M., Trimborn, S., Verde, C., Verleyen, E., Wall, D.H., Wilson, N.G., and Xavier, J.C. (2018) Cross-disciplinarity in the advance of Antarctic ecosystem research. Marine Genomics, 37.

Hoj, Lone, Levy, Natalie, Baillie, Brett K., Clode, Peta L., Strohmaier, Raphael C., Siboni, Nachshon, Webster, Nicole S., Uthicke, Sven, and Bourne, David G. (2018) Crown-of-thorns sea star Acanthaster cf. solaris has tissue-characteristic microbiomes with potential roles in health and reproduction. Applied and Environmental Microbiology, 84 (13).

Brazenor, Alexander K.,, Bertozzi, Terry, Miller, Terrence L., Whittington, Ian D., and Hutson, Kate S. (2018) DNA profiling reveals Neobenedenia girellae as the primary culprit in global fisheries and aquaculture. Molecular Phylogenetics and Evolution, 129. pp. 130-137.

Huerlimann, Roger, Wade, Nicholas M., Gordon, Lavinia, Montenegro, Juan D., Goodall, Jake, McWilliam, Sean, Tinning, Matthew, Siemering, Kirby, Giardina, Erika, Donovan, Dallas, Sellars, Melony J., Cowley, Jeff A., Condon, Kelly, Coman, Greg J., Khatkar, Mehar S., Raadsma, Herman W., Maes, Gregory E., Zenger, Kyall R., and Jerry, Dean R. (2018) De novo assembly, characterization, functional annotation and expression patterns of the black tiger shrimp (Penaeus monodon) transcriptome. Scientific Reports, 8. 13553.

Souza, Carla Anjos, Murphy, Nicholas, and Strugnell, Jan M. (2018) De novo transcriptome assembly and functional annotation of the southern rock lobster (Jasus edwardsii). Marine Genomics, 42. pp. 58-62.

Bouyoucos, Ian A., Weideli, Ornella C., Planes, Serge, Simpfendorfer, Colin A., and Rummer, Jodie L. (2018) Dead tired: evaluating the physiological status and survival of neonatal reef sharks under stress. Conservation Physiology, 6 (1). coy053.

Torda, Gergely, Sambrook, Katie, Cross, Peter, Sato, Yui, Bourne, David G., Lukoschek, Vimoksalehi, Hill, Tessa, Torras Jorda, Georgina, Moya, Aurelie, and Willis, Bette L. (2018) Decadal erosion of coral assemblages by multiple disturbances in the Palm Islands, central Great Barrier Reef. Scientific Reports, 8. 11885. pp. 1-10.

Russ, Garry R., Payne, Cody S., Bergseth, Brock J., Rizzari, Justin R., Abesamis, Rene A., and Alcala, Angel C. (2018) Decadal-scale response of detritivorous surgeonfishes (family Acanthuridae) to no-take marine reserve protection and changes in benthic habitat. Journal of Fish Biology, 93 (5). pp. 887-900.

Mohamed, Amin R., Cumbo, Vivian R., Harii, Saki, Shinzato, Chuya, Chan, Cheong Xin, Ragan, Mark A., Satoh, Nori, Ball, Eldon E., and Miller, David J. (2018) Deciphering the nature of the coral-Chromera association. ISME Journal: multidisciplinary journal of microbial ecology, 12 (3). pp. 776-790.

Barnes, Alissa, Sutaria, Dipani, Harry, Alastair V., and Jabado, Rima W. (2018) Demographics and length and weight relationships of commercially important sharks along the north-western coast of India. Aquatic Conservation: marine and freshwater ecosystems, 28 (6). pp. 1374-1383.

MacDonald, Chancey, Tauati, Mele I., and Jones, Geoffrey P. (2018) Depth patterns in microhabitat versatility and selectivity in coral reef damselfishes. Marine Biology, 165 (8). 138.

Metcalfe, Suzanne S., Kroon, Frederieke J., Beale, David J., and Miller, Gabrielle (2018) Development of a validation protocol of enzyme immunoassay kits used for the analysis of steroid hormones in fish plasma. Journal of Experimental Marine Biology and Ecology, 499. pp. 26-34.

Jarrold, Michael D., and Munday, Philip L. (2018) Diel CO2 cycles do not modify juvenile growth, survival and otolith development in two coral reef fish under ocean acidification. Marine Biology: international journal on life in oceans and coastal waters, 165 (3). 49.

Eurich, Jacob G., McCormick, Mark I., and Jones, Geoffrey P. (2018) Direct and indirect effects of interspecific competition in a highly partitioned guild of reef fishes. Ecosphere, 9 (8). e02389.

Bergseth, Brock J., and Roscher, Matthew (2018) Discerning the culture of compliance through recreational fisher's perceptions of poaching. Marine Policy, 89. pp. 132-141.

Mera, Hanaka, and Bourne, David G. (2018) Disentangling causation: complex roles of coral-associated microorganisms in disease. Environmental Microbiology, 20 (2). pp. 431-449.

Goetze, Jordan S., Langlois, Tim J., McCarter, Joe, Simpfendorfer, Colin A., Hughes, Alec, Tingo Leve, Jacob, and Jupiter, Stacy D. (2018) Drivers of reef shark abundance and biomass in the Solomon Islands. PLoS ONE, 13 (7). e0200960.

Sato, Yui, Bell, Sara C., Nichols, Cassandra, Fry, Kent, Menéndez, Patricia, and Bourne, David G. (2018) Early-phase dynamics in coral recovery following cyclone disturbance on the inshore Great Barrier Reef, Australia. Coral Reefs, 37 (2). pp. 431-443.

McCormick, Mark I., Watson, Sue-Ann, Simpson, Stephen D., and Allan, Bridie J.M. (2018) Effect of elevated CO2 and small boat noise on the kinematics of predator-prey interactions. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1875). 20172650.

Syafrizal, Syafrizal, Jones, Clive M., Permana, Idat G., and Utomo, Nur Bambang P. (2018) Effect of feeding frequency on survival and growth of juvenile spiny lobster Panulirus versicolor in Indonesia. Aquaculture, Aquarium, Conservation and Legislation, 11 (5). pp. 1427-1434.

Lane, Daniel J., Truong, Ewan, Larizza, Francesca, Chiew, Precilla, de Nys, Rocky, and van Eyk, Philip J. (2018) Effect of hydrothermal carbonization on the combustion and gasification behavior of agricultural residues and macroalgae: devolatilization characteristics and char reactivity. Energy & Fuels, 32 (4). pp. 4149-4159.

Critchell, Kay, and Hoogenboom, Mia O. (2018) Effects of microplastic exposure on the body condition and behaviour of planktivorous reef fish (Acanthochromis polyacanthus). PLoS ONE, 13 (3). e0193308.

O'Brien, Paul A., Smith, Hillary A., Fallon, Stewart, Fabricius, Katharina, Willis, Bette L., Morrow, Kathleen M., and Bourne, David G. (2018) Elevated CO2 has little influence on the bacterial communities associated with the pH-tolerant coral, massive Porites spp. Frontiers in Microbiology, 9. 2621.

Ramsby, Blake D., Hoogenboom, Mia O., Whalan, Steve, and Webster, Nicole S. (2018) Elevated seawater temperature disrupts the microbiome of an ecologically important bioeroding sponge. Molecular Ecology, 27 (8). pp. 2124-2137.

Jarrold, Michael D., and Munday, Philip L. (2018) Elevated temperature does not substantially modify the interactive effects between elevated CO2 and diel CO2 cycles on the survival, growth and behavior of a coral reef fish. Frontiers in Marine Science, 5. 458.

Flint, N., Pearson, R.G., and Crossland, M.R. (2018) Embryos of eastern rainbowfish Melanotaenia splendida splendida (Peters, 1866) tolerate fluctuating hypoxia. Marine and Freshwater Research, 69 (6). pp. 987-991.

Kingsford, M.J., Becken, S., Bordehore, C., Fuentes, V.L., Pitt, K.A., and Yangihara, A.A. (2018) Empowering stakeholders to manage stinging jellyfish: a perspective. Coastal Management, 46 (1). pp. 1-18.

Riskas, Kimberly A., Tobin, Renae C., Fuentes, Mariana M.P.B, and Hamann, Mark (2018) Evaluating the threat of IUU fishing to sea turtles in the Indian Ocean and Southeast Asia using expert elicitation. Biological Conservation, 217. pp. 232-239.

Harry, Alastair (2018) Evidence for systemic age underestimation in shark and ray ageing studies. Fish and Fisheries, 19 (2). pp. 185-200.

Zeh, Daniel R., Heupel, Michelle R., Hamann, Mark, Jones, Rhondda, Limpus, Colin J., and Marsh, Helene (2018) Evidence of behavioural thermoregulation by dugongs at the high latitude limit to their range in eastern Australia. Journal of Experimental Marine Biology and Ecology, 508. pp. 27-34.

McAllister, Jaime D., Barnett, Adam, Lyle, Jeremy M., Stehfest, Kilian M., and Semmens, Jayson M. (2018) Examining trends in abundance of an overexploited elasmobranch species in a nursery area closure. Marine and Freshwater Research, 69 (3). pp. 376-384.

Chakravarti, Leela J., and van Oppen, Madeleine J.H. (2018) Experimental evolution in coral photosymbionts as a tool to increase thermal tolerance. Frontiers in Marine Science, 5. 227.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2018) Exploring the diversity-stability paradigm using sponge microbial communities. Scientific Reports, 8. 8425.

Huertas, Victor, and Bellwood, David R. (2018) Feeding innovations and the first coral-feeding fishes. Coral Reefs, 37 (3). pp. 649-658.

Udyawer, Vinay, Barnes, Peter, Bonnet, Xavier, Brischoux, François, Crowe-Riddell, Jenna M., D'Anastasi, Blanche, Fry, Bryan G., Gillett, Amber, Goiran, Claire, Guinea, Michael L., Heatwole, Harold, Heupel, Michelle R., Hourston, Mathew, Kangas, Mervi, Kendrick, Alan, Koefoed, Inigo, Lillywhite, Harvey B., Lobo, Aaron S., Lukoschek, Vimoksalehi, McAuley, Rory, Nitschke, Charlotte, Rasmussen, Arne R., Sanders, Kate L., Sheehy, Coleman, Shine, Richard, Somaweera, Ruchira, Sweet, Samuel S., and Voris, Harold K. (2018) Future directions in the research and management of marine snakes. Frontiers in Marine Science, 9 (5). 399.

Basiita, Rose K., Zenger, Kyall R., Mwanja, Matthew T., and Jerry, Dean R. (2018) Gene flow and genetic structure in Nile perch, Lates niloticus, from African freshwater rivers and lakes. PLoS ONE, 13 (7). e0200001.

Al-Breiki, Rufaida Dhuhai, Kjeldsen, Shannon R., Afzal, Hasifa, Al Hinai, Manal Saif, Zenger, Kyall R., Jerry, Dean R., Al-Abri, Mohammed Ali, and Delghandi, Madjid (2018) Genome-wide SNP analyses reveal high gene flow and signatures of local adaptation among the scalloped spiny lobster (Panulirus homarus) along the Omani coastline. BMC Genomics, 19. 690.

Morse, Peter, Kjeldsen, Shannon R., Meekan, Mark G., McCormick, Mark I., Finn, Julian, Huffard, Christine L., and Zenger, Kyall R. (2018) Genome-wide comparisons reveal a clinal species pattern within a holobenthic octopod - the Australian Southern blue-ringed octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Ecology and Evolution, 8 (4). pp. 2253-2267.

Lal, Monal M., Southgate, Paul C., Jerry, Dean R., and Zenger, Kyall R. (2018) Genome-wide comparisons reveal evidence for a species complex in the black-lip pearl oyster Pinctada margaritifera (Bivalvia: Pteriidae). Scientific Reports, 8. 191.

Dibattista, Joseph D., Wakefield, Corey B., Moore, Glenn I., Bunce, Michael, Williams, Ashley J., O'Malley, Joseph M., Humphreys, Robert L., Halafihi, Tuikolongahau, Williams, Alan, Green, Mark A., Graham, Ken, Tucker, Sarah J., Cruz, Eric, and Newman, Stephen J. (2018) Genomic and life-history discontinuity reveals a precinctive lineage for a deep-water grouper with gene flow from tropical to temperate waters on the west coast of Australia. Ecological Genetics and Genomics, 9. pp. 23-33.

Sanchez, Gustavo, Setiamarga, Davin H.E., Tuanapaya, Surangkana, Tongtherm, Kittichai, Winkelmann, Inger E., Schmidbaur, Hannah, Umino, Tetsuya, Albertin, Caroline, Allcock, Louise, Perales-Raya, Catalina, Gleadall, Ian, Strugnell, Jan M., Simakov, Oleg, and Nabhitabhata, Jaruwat (2018) Genus-level phylogeny of cephalopods using molecular markers: current status and problematic areas. PeerJ, 6. e4331.

Bennett, Scott, Halford, Andrew R., Choat, J. Howard, Hobbs, Jean-Paul A., Santana-Garcon, Julia, Ayling, Anthony, Harvey, Euan S., and Newman, Stephen J. (2018) Geography and island geomorphology shape fish assemblage structure on isolated coral reef systems. Ecology and Evolution, 8 (12). pp. 6242-6252.

Morais, Renato A., and Bellwood, David R. (2018) Global drivers of reef fish growth. Fish and Fisheries, 19 (5). pp. 874-889.

Loffler, Zoe, Graba-Landry, Alexia, Kidgell, Joel T., McClure, Eva C., Pratchett, Morgan S., and Hoey, Andrew S. (2018) Holdfasts of Sargassum swartzii are resistant to herbivory and resilient to damage. Coral Reefs, 37 (4). pp. 1075-1084.

Cole, Andrew, Praeger, Christina, Mannering, Thomas, de Nys, Rocky, and Magnusson, Marie (2018) Hot and bright: thermal and light environments for the culture of Oedogonium intermedium and the geographical limits for large-scale cultivation in Australia. Algal Research, 34 (2018). pp. 209-216.

Bao, Chenchang, Yang, Yanan, Zeng, Chaoshu, Huang, Huiyang, and Ye, Haihui (2018) Identifying neuropeptide GPCRs in the mud crab, Scylla paramamosain, by combinatorial bioinformatics analysis. General and Comparative Endocrinology, 269. pp. 122-130.

Jain-Schlaepfer, Sofia, Fakan, Eric, Rummer, Jodie L., Simpson, Stephen D., and McCormick, Mark I. (2018) Impact of motorboats on fish embryos depends on engine type. Conservation Physiology, 6 (1).

Sheaves, Marcus, Johnston, Ross, Miller, Kelsey, and Nelson, Paul N. (2018) Impact of oil palm development on the integrity of riparian vegetation of a tropical coastal landscape. Agriculture, Ecosystems and Environment, 262. pp. 1-10.

Machado, Lorenna, Tomkins, Nigel, Magnusson, Marie, Midgley, David J., de Nys, Rocky, and Rosewarne, Carly P. (2018) In vitro response of rumen microbiota to the antimethanogenic red acroalga Asparagopsis taxiformis. Microbial Ecology, 75 (3). pp. 811-818.

Dixson, Danielle L., and Jones, Geoffrey P. (2018) Influence of prior residents on settlement preferences in the anemonefish, Premnas biaculeatus. Coral Reefs, 37 (2). pp. 519-526.

Matley, Jordan K., Maes, Gregory E., Devloo-Delva, Floriaan, Huerlimann, Roger, Chua, Gladys, Tobin, Andrew J., Fisk, Aaron T., Simpfendorfer, Colin A., and Heupel, Michelle R. (2018) Integrating complementary methods to improve diet analysis in fishery‐targeted species. Ecology and Evolution, 8 (18). pp. 9503-9515.

Hair, Cathy A., Ram, Ravinesh, and Southgate, Paul C. (2018) Is there a difference between bêche-de-mer processed from ocean-cultured and wild-harvested sandfish (Holothuria scabra)? Aquaculture, 483. pp. 63-68.

Quigley, Kate M., Bay, Line K., and Willis, Bette L. (2018) Leveraging new knowledge of Symbiodinium community regulation in corals for conservation and reef restoration. Marine Ecology Progress Series, 600. pp. 245-253.

Grant, Michael I., Smart, Jonathan J., White, William T., Chin, Andrew, Baje, Leontine, and Simpfendorfer, Colin A. (2018) Life history characteristics of the silky shark Carcharhinus falciformis from the central west Pacific. Marine and Freshwater Research, 69 (4). pp. 562-573.

Perry, Chris T., Alvarez-Filip, Lorenzo, Graham, Nicholas A.J., Mumby, Peter J., Wilson, Shaun K., Kench, Paul S., Manzello, Derek P., Morgan, Kyle M., Slangen, Aimee B.A., Thomson, Damian P., Januchowski-hartley, Fraser, Smithers, Scott G., Steneck, Robert S., Carlton, Renee, Edinger, Evan N., Enochs, Ian C., Estrada-Saldivar, Nuria, Haywood, Michael D.E., Kolodziej, Graham, Murphy, Gary N., Perez-Cervantes, Esmeralda, Suchley, Adam, Valentino, Lauren, Boenish, Robert, Wilson, Margaret, and Macdonald, Chancey (2018) Loss of coral reef growth capacity to track future increases in sea level. Nature, 558. pp. 396-408.

Booth, Mark, and Pirozzi, Igor (2018) Making sense of nonsense: using regression analysis to deal with highly variable data collected from a yellowtail kingfish (Seriola lalandi) digestibility experiment. Aquaculture, 485. pp. 39-48.

Bonebrake, Timothy C., Brown, Christopher J., Bell, Johann D., Blanchard, Julia L., Chauvenet, Alienor, Champion, Curtis, Chen, I-Ching, Clark, Timothy D., Colwell, Robert K., Danielsen, Finn, Dell, Anthony I., Donelson, Jennifer M., Evengård, Birgitta, Ferrier, Simon, Frusher, Stewart, Garcia, Raquel A., Griffis, Roger B., Hobday, Alistair J., Jarzyna, Marta A., Lee, Emma, Lenoir, Jonathan, Linnetved, Hlif, Martin, Victoria Y., McCormack, Phillipa C., McDonald, Jan, McDonald-Madden, Eve, Mitchell, Nicola, Mustonen, Tero, Pandolfi, John M., Pettorelli, Nathalie, Possingham, Hugh, Pulsifer, Peter, Reynolds, Mark, Scheffers, Brett R., Sorte, Cascde J.B., Strugnell, Jan M., Tuanmu, Mao-Ning, Twiname, Samantha, Vergés, Adriana, Villanueva, Cecilia, Wapstra, Erik, Wernberg, Thomas, and Pecl, Gretta T. (2018) Managing consequences of climate-driven species redistribution requires integration of ecology, conservation and social science. Biological Reviews, 93 (1). pp. 284-305.

MacDonald, Chancey, Jones, Geoffrey P., and Bridge, Tom (2018) Marginal sinks or potential refuges? Costs and benefits for coral-obligate reef fishes at deep range margins. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1890). 20181545.

Richardson, Laura E., Graham, Nicholas A.J., Pratchett, Morgan S., Eurich, Jacob G., and Hoey, Andrew S. (2018) Mass coral bleaching causes biotic homogenization of reef fish assemblages. Global Change Biology, 24 (7). pp. 3117-3129.

Morse, Peter, Huffard, Christine L., Meekan, Mark G., McCormick, Mark I., and Zenger, Kyall R. (2018) Mating behaviour and postcopulatory fertilization patterns in the southern blue-ringed octopus, Hapalochlaena maculosa. Animal Behaviour, 136. pp. 41-51.

Green, Madeline E., D'Anastasi, Blanche R., Hobbs, Jean-Paul A., Feldheim, Kevin, McAuley, Rory, Peverell, Stirling, Stapley, Jason, Johnson, Grant, Appleyard, Sharon A., White, William T., Simpfendorfer, Colin A., and van Herwerden, Lynne (2018) Mixed-marker approach suggests maternal philopatry and sex-biased behaviours of narrow sawfish Anoxypristis cuspidata. Endangered Species Research, 37. pp. 45-54.

Trujillo-González, A., Becker, J.A., Vaughan, D.B., and Hutson, K.S. (2018) Monogenean parasites infect ornamental fish imported to Australia. Parasitology Research, 117 (4). pp. 995-1011.

Pascelli, Cecilia, Laffy, Patrick W., Kupresanin, Marija, Ravasi, Timothy, and Webster, Nicole S. (2018) Morphological characterization of virus-like particles in coral reef sponges. PeerJ, 6. e5625.

Palacios, M.M., Malerba, M. E., and McCormick, M. I. (2018) Multiple predator effects on juvenile prey survival. Oecologia, 188 (2). pp. 417-427.

Springall, Gabriella A.C., and Yin, Ling (2018) Nano-scale mechanical behavior of pre-crystallized CAD/CAM zirconia-reinforced lithium silicate glass ceramic. Journal of the Mechanical Behavior of Biomedical Materials, 82. pp. 35-44.

Razaghi, Ali, Heimann, Kirsten, Schaeffer, Patrick M., and Gibson, Spencer B. (2018) Negative regulators of cell death pathways in cancer: perspective on biomarkers and targeted therapies. Apoptosis, 23 (2). pp. 93-112.

Meekan, Mark G., McCormick, Mark I., Simpson, Stephen D., Chivers, Douglas P., and Ferrari, Maud C.O. (2018) Never off the hook: how fishing subverts predator-prey relationships in marine teleosts. Frontiers in Ecology and Evolution, 6. 157. pp. 1-10.

Baker, Ronald, Bradley, Michael, Freddi, Stefano, Abrantes, Katya, Barnett, Adam, and Sheaves, Marcus (2018) Non-lethal aging of tropical catch-and-release sport fishery species. Fisheries Research, 207. pp. 110-117.

Chin, Andrew (2018) Notes from the field: the value of observational data and natural history. Pacific Conservation Biology, 24 (1). pp. 1-2.

Buelow, Christina A., Baker, Ronald, Reside, April E., and Sheaves, Marcus (2018) Nutrient subsidy indicators predict the presence of an avian mobile-link species. Ecological Indicators, 89. pp. 507-515.

Woodings, Laura N., Murphy, Nicholas P., Doyle, Stephen R., Hall, Nathan E., Robinson, Andrew J., Liggins, Geoffrey W., Green, Bridget S., Cooke, Ira R., Bell, James J., and Strugnell, Jan M. (2018) Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi. Marine Biology, 165 (12). 185.

Noble, T.H., Stratford, C.N., Wade, N., Cowley, J.A., Sellars, M.J., Coman, G.J., and Jerry, D.R. (2018) PCR testing of single tissue samples can result in misleading data on gill-associated virus infection loads in shrimp. Aquaculture, 492. pp. 91-96.

do Prado, Fernanda Dotti, Vera, Manuel, Hermida, Miguel, Bouza, Carmen, Pardo, Belén G., Vilas, Román, Blanco, Andrés, Fernández, Carlos, Maroso, Francesco, Maes, Gregory E., Turan, Cemal, Volckaert, Filip A.M., Taggart, John B., Carr, Adrian, Ogden, Rob, Nielsen, Einar Eg, Aquatrace, Consortium, and Martínez, Paulino (2018) Parallel evolution and adaptation to environmental factors in a marine flatfish: implications for fisheries and aquaculture management of the turbot (Scophthalmus maximus). Evolutionary Applications, 11 (8). pp. 1322-1341.

Foote, A.R., Stratford, C.N., and Coman, G.J. (2018) Passive integrated transponder (PIT) tagging black tiger shrimp, Penaeus monodon: Applications for breeding programs. Aquaculture, 491. pp. 321-324.

Maroso, F., Hillen, J.E.J., Pardo, B.G., Gkagkavouzis, K., Coscia, I., Hermida, M., Franch, R., Hellemans, B., Van Houdt, J., Simionati, B., Taggart, J.B., Nielsen, E.E., Maes, G.E., Ciavaglia, S.A., Webster, L.M., Volckaert, F.A.M., Martínez, P., Bargelloni, Luca, Ogden, R., and AquaTrace Consortium (2018) Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species. Marine Genomics, 39. pp. 64-72.

Blondeau-Patissier, David, Brando, Vittorio Ernesto, Lønborg, Christian, Leahy, Susannah M., and Dekker, Arnold G. (2018) Phenology of Trichodesmium spp. blooms in the Great Barrier Reef lagoon, Australia, from the ESA-MERIS 10-year mission. PLoS ONE, 13 (12). e0208010.

Barnett, Leonie J., and Miller, Terrence L. (2018) Phenotypic plasticity of six unusual cercariae in nassariid gastropods and their relationships to the Acanthocolpidae and Brachycladiidae (Digenea). Parasitology International, 67 (2). pp. 225-232.

Nordborg, F. Mikaela, Flores, Florita, Brinkman, Diane L., Agustí, Susana, and Negri, Andrew P. (2018) Phototoxic effects of two common marine fuels on the settlement success of the coral Acropora tenuis. Scientific Reports, 8. 8635.

Egan, Joshua P., Bloom, Devin D., Kuo, Chien-Hsien, Hammer, Michael P., Tongnunui, Prasert, Iglésias, Samuel P., Sheaves, Marcus, Grudpan, Chaiwut, and Simons, Andrew M. (2018) Phylogenetic analysis of trophic niche evolution reveals a latitudinal herbivory gradient in Clupeoidei (herrings, anchovies, and allies). Molecular Phylogenetics and Evolution, 124. pp. 151-161.

Floeter, Sergio R., Bender, Mariana G., Siqueira Correa, Alexandre C., and Cowman, Peter F. (2018) Phylogenetic perspectives on reef fish functional traits. Biological Reviews, 93 (1). pp. 131-151.

Lamb, Joleah B., Willis, Bette L., Fiorenza, Evan A., Couch, Courtney S., Howard, Robert, Rader, Douglas N., True, James D., Kelly, Lisa A., Ahmad, Awaludinnoer, Jompa, Jamaluddin, and Harvell, C. Drew (2018) Plastic waste associated with disease on coral reefs. Science, 359 (6374). pp. 460-462.

Ramos, Jorge E., Pecl, Gretta T., Moltschaniwskyj, Natalie, Semmens, Jayson M., Souza, Carla A., and Strugnell, Jan M. (2018) Population genetic signatures of a climate change driven marine range extension. Scientific Reports, 8. 9558.

Campbell, Matthew J., McLennan, Mark F., Courtney, Anthony J., and Simpfendorfer, Colin A. (2018) Post-release survival of two elasmobranchs, the eastern shovelnose ray (Aptychotrema rostrata) and the common stingaree (Trygonoptera testacea), discarded from a prawn trawl fishery in southern Queensland, Australia. Marine and Freshwater Research, 69 (4). pp. 551-561.

Zhu, Youjian, Van Eyk, Philip, Boman, Christoffer, Brostrom, Markus, Kirtania, Kawnish, Piotrowska, Patrycja, Bostrom, Dan, de Nys, Rocky, Bhattacharya, Sankar, Gentili, Francesco, and Ashman, Peter (2018) Preliminary understanding on the ash behavior of algae during cogasification in an entrained flow reactor. Fuel Processing Technology, 175. pp. 26-34.

Jones, Clive (2018) Progress and obstacles in establishing rock lobster aquaculture in Indonesia. Bulletin of Marine Science, 94 (3). pp. 1223-1233.

Noordin, Noordiyana Mat, Zeng, Chaoshu, and Southgate, Paul C. (2018) Progress in diet development for blue swimmer crab, Portunus pelagicus, juveniles: effect of dietary phospholipid on survival, development, growth and resistance to osmotic shock. Aquaculture Nutrition, 24 (6). pp. 1834-1844.

Nugraha, Roni, Kamath, Sandip D., Johnston, Elecia, Zenger, Kyall R., Rolland, Jennifer M., O’Hehir, Robyn E., and Lopata, Andreas L. (2018) Rapid and comprehensive discovery of unreported shellfish allergens using large-scale transcriptomic and proteomic resources. Journal of Allergy and Clinical Immunology, 141 (4). e8. pp. 1501-1504.

Cabral, Reniel B., Mayorga, Juan, Clemence, Michaela, Lynham, John, Koeshendrajana, Sonny, Muawanah, Umi, Nugroho, Duto, Anna, Zuzy, Mira, Ghofar, Abdul, Zulbainarni, Nimmi, Gaines, Steven D., and Costello, Christopher (2018) Rapid and lasting gains from solving illegal fishing. Nature Ecology & Evolution, 2. pp. 650-658.

Karthikeyan, O.P., Nguyen Hao, H.T., Razaghi, Ali, and Heimann, Kirsten (2018) Recycling of food waste for fuel precursors using an integrated bio-refinery approach. Bioresource Technology, 248 (Part A). pp. 194-198.

Bierwagen, Stacy L., Emslie, Michael J., Heupel, Michelle R., Chin, Andrew, and Simpfendorfer, Colin A. (2018) Reef-scale variability in fish and coral assemblages on the central Great Barrier Reef. Marine Biology, 165. 144.

Daly, Ryan, Smale, Malcolm J., Singh, Sarika, Anders, Darrell, Shivji, Mahmood, Daly, Clare A.K., Lea, James S.E., Sousa, Lara L., Wetherbee, Bradley M., Fitzpatrick, Richard, Clarke, Christopher R., Sheaves, Marcus, and Barnett, Adam (2018) Refuges and risks: evaluating the benefits of an expanded MPA network for mobile apex predators. Diversity and Distributions, 24 (9). pp. 1217-1230.

Ceccarelli, Daniela M., Loffler, Zoe, Bourne, David G., Al Moajil-Cole, Grace S., Boström Einarsson, Lisa, Evans-Illidge, Elizabeth, Fabricius, Katharina, Glasl, Bettina, Marshall, Paul, McLeod, Ian, Read, Mark, Schaffelke, Britta, Smith, Adam K., Jorda, Georgina T., Williamson, David H., and Bay, Line (2018) Rehabilitation of coral reefs through removal of macroalgae: state of knowledge and considerations for management and implementation. Restoration Ecology, 26 (5). pp. 827-838.

Fisher, Eric E., Choat, John H., McCormick, Mark I., and Cappo, Mike (2018) Relative influence of environmental factors on the timing and occurrence of multi-species coral reef fish aggregations. PLoS ONE, 13 (12). e0209234.

Cabral, Reniel B., Gaines, Steven D., Mayorga, Juan, Clemence, Michaela, Lynham, John, Koeshendrajana, Sonny, Muawanah, Umi, Nugroho, Duto, Anna, Zuzy, Mira, Ghofar, Abdul, Zulbainarni, Nimmi, and Costello, Christopher (2018) Reply to ‘Achieving sustainable and equitable fisheries requires nuanced policies not silver bullets’. Nature Ecology & Evolution, 2. p. 1335.

Flint, Nicole, Pearson, Richard G., and Crossland, Michael R. (2018) Reproduction and embryo viability of a range-limited tropical freshwater fish exposed to fluctuating hypoxia. Marine and Freshwater Research, 69 (2). pp. 267-276.

Krueck, Nils C., Legrand, Christelle, Ahmadia, Gabby N., Estradivari, Green, Alison, Jones, Geoffrey P., Riginos, Cynthia, Treml, Eric A., and Mumby, Peter J. (2018) Reserve sizes needed to protect coral reef fishes. Conservation Letters, 11 (3). e12415.

Zamora, Leonardo Nicolas, Yuan, Xiutang, Carton, Alexander Guy, and Slater, Matthew James (2018) Role of deposit‐feeding sea cucumbers in integrated multitrophic aquaculture: progress, problems, potential and future challenges. Reviews in Aquaculture, 10 (1). pp. 57-74.

Nadler, Lauren E., Killen, Shaun S., Domenici, Paolo, and McCormick, Mark I. (2018) Role of water flow regime in the swimming behaviour and escape performance of a schooling fish. Biology Open, 7 (10). bio031997.

Ferrari, Maud C.O., McCormick, Mark I., Meekan, Mark G., Simpson, Stephen D., Nedelec, Sophie L., and Chivers, Douglas P. (2018) School is out on noisy reefs: the effect of boat noise on predator learning and survival of juvenile coral reef fishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1871). 20180033.

Diopere, Eveline, Vandamme, Sara G., Hablutzel, Pascal I., Cariani, Alessia, Van Houdt, Jeroen, Rijnsdorp, Adriaan, Tinti, Fausto, FishPopTrace Consortium, Volckaert, Filip A.M., and Maes, Gregory E. (2018) Seascape genetics of a flatfish reveals local selection under high levels of gene flow. ICES Journal of Marine Science, 75 (2). pp. 675-689.

Tebbett, Sterling B., Bellwood, David R., and Purcell, Steven W. (2018) Sediment addition drives declines in algal turf yield to herbivorous coral reef fishes: implications for reefs and reef fisheries. Coral Reefs, 37 (3). pp. 929-937.

Ricardo, Gerard F., Jones, Ross J., Clode, Peta L., Humanes, Adriana, Giofre, Natalie, and Negri, Andrew P. (2018) Sediment characteristics influence the fertilisation success of the corals Acropora tenuis and Acropora millepora. Marine Pollution Bulletin, 135. pp. 941-953.

Domingos, Jose A., Budd, Alyssa M., Banh, Quyen Q., Goldsbury, Julie A., Zenger, Kyall R., and Jerry, Dean R. (2018) Sex-specific dmrt1 and cyp19a1 methylation and alternative splicing in gonads of the protandrous hermaphrodite barramundi. PLoS ONE, 13 (9). e0204182.

Brooker, Rohan M., Muñoz Ruiz, Enid C., Sih, Tiffany L., and Dixson, Danielle L. (2018) Shelter availability mediates decorating in the majoid crab, Camposcia retusa. Behavioral Ecology, 29 (1). pp. 179-185.

Fingerhut, Legana C.H.W., Strugnell, Jan M., Faou, Pierre, Labiaga, Àlvaro Roura, Zhang, Jia, and Cooke, Ira R. (2018) Shotgun proteomics analysis of saliva and salivary gland tissue from the common octopus Octopus vulgaris. Journal of Proteome Research, 17 (11). pp. 3866-3876.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2018) Site fidelity facilitates pair formation in aggregations of coral reef cardinalfish. Oecologia, 186 (2). pp. 425-434.

Roura, Álvaro, Strugnell, Jan M., Guerra, Ángel, Gonzalez, Ángel F., and Richardson, Anthony J. (2018) Small copepods could channel missing carbon through metazoan predation. Ecology and Evolution, 8 (22). pp. 10868-10878.

Puncher, Gregory N., Cariani, Alessia, Maes, Gregory E., Van Houdt, Jeroen, HertenKatho, Koen, Cannas, Rita, Rodriguez-Ezpeleta, Naiara, Albaina, Aitor, Estonba, Andone, Lutcavage, Molly, Hanke, Alex, Rooker, Jay, Franks, James S., Quattro, Joseph S., Basilone, Gualtiero, Fraile, Igaratza, Laconcha, Urtzi, Goni, Nicolas, Kimoto, Ai, Macias, David, Alemany, Francisco, Deguara, Simeon, Zgozi, Salem W., Garibaldi, Fulvio, Oray, Isik K., Karakulak, Firdes Saadet, Abid, Noureddine, Santos, Miguel N., Addis, Piero, Arrizabalaga, Haritz, and Tinti, Fausto (2018) Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next-generation sequencing. Molecular Ecology Resources, 18 (3). pp. 620-638.

Bardy, Jake Jervis, Sarovich, Derek S., Price, Erin, Steinig, Eike, Tong, Steven, Drilling, Amanda, Ou, Judy, Vreugde, Sarah, Wormald, Peter-John, and Psaltis, Alkis J. (2018) Staphylococcus aureus from patients with chronic rhinosinusitis show minimal genetic association between polyp and non-polyp phenotypes. BMC Ear Nose And Throat Disorders, 18. 16.

Barton, Diane P., Taillebois, Laura, Taylor, Jonathan, Crook, David A., Saunders, Thor, Hearnden, Mark, Greig, Alan, Welch, David J., Newman, Stephen J., Travers, Michael J., Saunders, Richard J., Errity, Chris, Maher, Safia, Dudgeon, Christine, and Ovenden, Jennifer (2018) Stock structure of Lethrinus laticaudis (Lethrinidae) across northern Australia determined using genetics, otolith microchemistry and parasite assemblage composition. Marine and Freshwater Research, 69 (4). pp. 487-501.

Komyakova, Valeriya, Jones, Geoffrey P., and Munday, Philip L. (2018) Strong effects of coral species on the diversity and structure of reef fish communities: a multi-scale analysis. PLoS ONE, 13 (8). e0202206.

Pazmiño, Diana A., Maes, Gregory E., Green, Madeline E., Simpfendorfer, Colin A., Hoyos-Padilla, E. Mauricio, Duffy, Clinton J.A., Meyer, Carl G., Kerwath, Sven E., Salinas-de-Leon, Pelayo, and van Herwerden, Lynne (2018) Strong trans-Pacific break and local conservation units in the Galapagos shark (Carcharhinus galapagensis) revealed by genome-wide cytonuclear markers. Heredity, 120. pp. 407-421.

Raby, Graham D., Messmer, Vanessa, Tobin, Andrew J., Hoey, Andrew S., Jutfelt, Fredrik, Sundin, Josefin, Cooke, Steven J., and Clark, Timothy D. (2018) Swim for it: effects of simulated fisheries capture on the post-release behaviour of four Great Barrier Reef fishes. Fisheries Research, 206. pp. 129-137.

Liu, Huanle, Stephens, Timothy G., González-Pech, Raúl A., Beltran, Victor H., Lapeyre, Bruno, Bongaerts, Pim, Cooke, Ira, Aranda, Manuel, Bourne, David G., Forêt, Sylvain, Miller, David J., van Oppen, Madeleine J.H., Voolstra, Christian R., Ragan, Mark A., and Chan, Cheong Xin (2018) Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis. Communications Biology, 1. 95.

Heupel, Michelle, Lédée, Elodie J. I., and Simpfendorfer, Colin A. (2018) Telemetry reveals spatial separation of co-occurring reef sharks. Marine Ecology - Progress Series, 589. pp. 179-192.

Cumbo, Vivian R., van Oppen, Madeleine J.H., and Baird, Andrew H. (2018) Temperature and symbiodinium physiology affect the establishment and development of symbiosis in corals. Marine Ecology - Progress Series, 587. pp. 117-127.

Villacorta-Rath, Cecilia, Souza, Carla A., Murphy, Nicholas P., Green, Bridget S., Gardner, Caleb, and Strugnell, Jan M. (2018) Temporal genetic patterns of diversity and structure evidence chaotic genetic patchiness in a spiny lobster. Molecular Ecology, 27 (1). pp. 54-65.

Smallhorn-West, Patrick, and Govan, Hugh (2018) Towards reducing misrepresentation of national achievements in marine protected area targets. Marine Policy, 97. pp. 127-129.

Blake, Denise F., Young, Derelle A., and Brown, Lawrence H. (2018) Transcutaneous oximetry: variability in normal values for the upper and lower limb. Diving and Hyperbaric Medicine, 48 (1). pp. 2-9.

Masese, Frank O., Abrantes, Kátya G., Gettel, Gretchen M., Irvine, Kenneth, Bouillon, Steven, and McClain, Michael E. (2018) Trophic structure of an African savanna river and organic matter inputs by large terrestrial herbivores: a stable isotope approach. Freshwater Biology, 63 (11). pp. 1365-1380.

Bierwagen, Stacy L., Heupel, Michelle R., Chin, Andrew, and Simpfendorfer, Colin A. (2018) Trophodynamics as a tool for understanding coral reef ecosystems. Frontiers in Marine Science, 5.

Jabado, Rima W., Kyne, Peter M., Pollom, Riley A., Ebert, David A., Simpfendorfer, Colin A., Ralph, Gina M., Al Dhaheri, Shaikha S., Akhilesh, K.V., Ali, Khadeeja, Ali, Mohamud Hassan, Al Mamari, Tariq M.S., Bineesh, K.K., El Hassan, Igbal S., Fernando, Daniel, Grandcourt, Edwin M., Khan, Muhammad Moazzam, Moore, Alec B.M., Owfi, Fereidoon, Robinson, David P., Romanov, Evgeny, Soares, Ana-Lucia, Spaet, Julia L.Y., Tesfamichael, Dawit, Valinassab, Tooraj, and Dulvy, Nicholas K. (2018) Troubled waters: threats and extinction risk of the sharks, rays and chimaeras of the Arabian Sea and adjacent waters. Fish and Fisheries, 19 (6). pp. 1043-1062.

Miller, Terrence L., Cutmore, Scott C., and Cribb, Thomas H. (2018) Two species of Neometadena Hafeezullah & Siddiqi, 1970 (Digenea: Cryptogonimidae) from Moreton Bay, Australia, including the description of Neometadena paucispina n. sp. from Australian Lutjanidae. Systematic Parasitology, 95 (7). pp. 655-664.

Quigley, Kate M., Warner, Patricia A., Bay, Line K., and Willis, Bette L. (2018) Unexpected mixed-mode transmission and moderate genetic regulation of Symbiodinium communities in a brooding coral. Heredity, 121 (6). pp. 524-536.

Tebbett, S.B., and Bellwood, D.R. (2018) Unusual caudal spines in the surgeonfish Zebrasoma scopas. Coral Reefs, 37 (1). p. 251.

Bauer-Civiello, Anne, Loder, Jennifer, and Hamann, Mark (2018) Using citizen science data to assess the difference in marine debris loads on reefs in Queensland, Australia. Marine Pollution Bulletin, 135. pp. 458-465.

D'Lima, Coralie, Everingham, Yvette, Diedrich, Amy, Mustika, Putu L., Hamann, Mark, and Marsh, Helene (2018) Using multiple indicators to evaluate the sustainability of dolphin-based wildlife tourism in rural India. Journal of Sustainable Tourism, 26 (10). pp. 1687-1707.

Blake, Denise F., Crowe, Melissa, Mitchell, Simon J., Aitken, Peter, and Pollock, Neal W. (2018) Vibration and bubbles: a systematic review of the effects of helicopter retrieval on injured divers. Diving and Hyperbaric Medicine, 48 (4). pp. 241-251.

Litvin, Steven Y., Weinstein, Michael P., Sheaves, Marcus, and Nagelkerken, Ivan (2018) What makes nearshore habitats nurseries for nekton? An emerging view of the nursery role hypothesis. Estuaries and Coasts, 41 (6). pp. 1539-1550.

Schlaefer, Jodie A., Wolanski, Eric, Lambrechts, Jonathan, and Kingsford, Michael J. (2018) Wind conditions on the Great Barrier Reef influenced the recruitment of snapper (Lutjanus carponotatus). Frontiers in Marine Science, 5. 193.

Ramsby, Blake D., Hoogenboom, Mia O., Smith, Hillary A., Whalan, Steve, and Webster, Nicole S. (2018) The bioeroding sponge Cliona orientalis will not tolerate future projected ocean warming. Scientific Reports, 8. 8302.

Zhang, Rui, Yuen, Alexander K.L., Magnusson, Marie, Wright, Jeffrey T., de Nys, Rocky, Masters, Anthony F., and Maschmeyer, Thomas (2018) A comparative assessment of the activity and structure of phlorotannins from the brown seaweed Carpophyllum flexuosum. Algal Research, 29. pp. 130-141.

Hadi, Tri A., Tuti, Yosephine, Hadiyanto, Abrar, Muhammad, Suharti, Santi R., Suharsono, and Gardiner, Naomi M. (2018) The dynamics of coral reef benthic and reef fish communities in Batam and Natuna Islands, Indonesia. Biodiversity, 19 (1-2). pp. 81-94.

Angell, Alex, de Nys, Rocky, Mangott, Arnold, and Vucko, Matthew J. (2018) The effects of concentration and supplementation time of natural and synthetic sources of astaxanthin on the colouration of the prawn Penaeus monodon. Algal Research, 35. pp. 577-585.

Tebbett, Sterling B., Goatley, Christopher H.R., Huertas Martin, Victor, Mihalitsis, Michalis, and Bellwood, David R. (2018) A functional evaluation of feeding in the surgeonfish Ctenochaetus striatus: the role of soft tissues. Royal Society Open Science, 5. 171111.

Bird, Christopher S., Veríssimo, Ana, Magozzi, Sarah, Abrantes, Kátya G., Aguilar, Alex, Al-Reasi, Hassan, Barnett, Adam, Bethea, Dana M., Biais, Gérard, Borrell, Asuncion, Bouchoucha, Marc, Boyle, Mariah, Brooks, Edward J., Brunnschweiler, Juerg, Bustamante, Paco, Carlisle, Aaron, Catarino, Diana, Caut, Stéphane, Cherel, Yves, Chouvelon, Tiphaine, Churchill, Diana, Ciancio, Javier, Claes, Julien, Colaco, Ana, Courtney, Dean L., Cresson, Pierre, Daly, Ryan, de Necker, Leigh, Endo, Tetsuya, Figueiredo, Ivone, Frisch, Ashley J., Holst Hansen, Joan, Heithaus, Michael, Hussey, Nigel E., Litembu, Johannes, Juanes, Francis, Kinney, Michael J., Kiszka, Jeremy J., Klarian, Sebastian A., Kopp, Dorothée, Leaf, Robert, Li, Yunkai, Lorrain, Anne, Madigan, Daniel J., Maljkovic, Aleksandra, Malpica-Cruz, Luis, Matich, Philip, Meekan, Mark G., Ménard, Frédéric, Menezes, Gui M., Munroe, Samantha E.M., Newman, Michael C., Papastamatiou, Yannis P., Pethybridge, Heidi, Plumlee, Jeffrey D., Polo-Silva, Carlos, Quaeck-Davies, Katie, Raoult, Vincent, Reum, Jonathan, Torres-Rojas, Yassir Eden, Shiffman, David S., Shipley, Oliver N., Speed, Conrad W., Staudinger, Michelle D., Teffer, Amy K., Tilley, Alexander, Valls, Maria, Vaudo, Jeremy J., Wai, Tak-Cheung, Wells, R J David, Wyatt, Alex S.J., Yool, Andrew, and Trueman, Clive N. (2018) A global perspective on the trophic geography of sharks. Nature Ecology & Evolution, 2. pp. 299-305.

Brandl, Simon J., Goatley, Christopher H.R., Bellwood, David R., and Tornabene, Luke (2018) The hidden half: ecology and evolution of cryptobenthic fishes on coral reefs. Biological Reviews, 93 (4). pp. 1846-1873.

Zeng, Chaoshu, Shao, Luchang, Ricketts, Amanda, and Moorhead, Jonathan (2018) The importance of copepods as live feed for larval rearing of the green mandarin fish Synchiropus splendidus. Aquaculture, 491. pp. 65-71.

Bolstad, Kat S.R., Braid, Heather E., Strugnell, Jan M., Lindgren, Annie R., Lischka, Alexandra, Kubodera, Tsunemi, Laptikhovsky, Vladimir L., and Labiaga, Alvaro Roura (2018) A mitochondrial phylogeny of the family Onychoteuthidae Gray, 1847 (Cephalopoda: Oegopsida). Molecular Phylogenetics and Evolution, 128. pp. 88-97.

Praeger, Christina, and de Nys, Rocky (2018) A new dimension in algal cultivation – 3D printed structures with a range of buoyancies. Algal Research, 36. pp. 209-216.

Reid, Amanda L., and Strugnell, Jan M. (2018) A new pygmy squid, Idiosepius hallami n. sp (Cephalopoda: Idiosepiidae) from eastern Australia and elevation of the southern endemic 'notoides' clade to a new genus, Xipholeptos n. gen. Zootaxa, 4369 (4). pp. 451-486.

Kölbl-Ebert, Martina, Ebert, Martin, Bellwood, David R., and Schulbert, Christian (2018) A piranha-like Pycnodontiform fish from the Late Jurassic. Current Biology, 28 (21). pp. 3516-3521.

Jabado, R.W., Kyne, P.M., Nazareth, E., and Sutaria, D.N. (2018) A rare contemporary record of the Critically Endangered Ganges shark Glyphis gangeticus. Journal of Fish Biology, 92 (5). pp. 1663-1669.

Scott, Abigail L., York, Paul H., Duncan, Clare, Macreadie, Peter I., Connolly, Rod M., Ellis, Megan T., Jarvis, Jessie C., Jinks, Kristin I., Marsh, Helene, and Rasheed, Michael A. (2018) The role of herbivory in structuring tropical seagrass ecosystem service delivery. Frontiers in Plant Science, 9. 127.

Bellwood, David R., Tebbett, Sterling B., Bellwood, Orpha, Mihalitsis, Michalis, Morais, Renato A., Streit, Robert P., and Fulton, Christopher J. (2018) The role of the reef flat in coral reef trophodynamics: past, present, and future. Ecology and Evolution, 8 (8). pp. 4108-4119.

Yuliani, Elizabeth L., Adnan, Hasantoha, Achdiawan, Ramadhani, Bakara, Denny, Heri, Valentinus, Sammy, Jim, Salim, M. Agus, and Sunderland, Terence (2018) The roles of traditional knowledge systems in orang-utan Pongo spp. and forest conservation: a case study of Danau Sentarum, West Kalimantan, Indonesia. Oryx, 52 (1). pp. 156-165.

Udyawer, Vinay, Dwyer, Ross G., Hoenner, Xavier, Babcock, Russell C., Brodie, Stephanie, Campbell, Hamish A., Harcourt, Robert G., Huveneers, Charlie, Jaine, Fabrice R.A., Simpfendorfer, Colin A., Taylor, Matthew D., and Heupel, Michelle R. (2018) A standardised framework for analysing animal detections from automated tracking arrays. Animal Biotelemetry, 6. 17.

Guppy, Jarrod L., Jones, Dave B., Jerry, Dean R., Wade, Nicholas M., Raadsma, Herman W., Huerlimann, Roger, and Zenger, Kyall R. (2018) The state of "omics" research for farmed penaeids: advances in research and impediments to industry utilization. Frontiers in Genetics, 9. 282.

Williams, Ashley J., Wakefield, Corey B., Newman, Steohen J., Vourey, Elodie, Abascal, Francisco J., Halafihi, Tuikolongahau, Kaltavara, Jeremie, and Nicol, Simon J. (2017) Oceanic, latitudinal, and sex-specific variation in demography of a tropical deepwater snapper across the indo-pacific region. Frontiers in Marine Science, 4. 382.

Brazenor, Alexander K., Francis, David S., Hutson, Kate S., and Carton, Alexander G. (2017) Biochemical composition of marine monogenean parasite eggs. Molecular and Biochemical Parasitology, 218. pp. 1-3.

Hoogenboom, Mia, Frank, Grace E., Chase, Tory J., Jurriaans, Saskia, Álvarez-Noriega, Mariana, Peterson, Katie, Critchell, Kay, Berry, Kathryn L.E., Nicolet, Katia J., Ramsby, Blake, and Paley S., Allison (2017) Environmental drivers of variation in bleaching severity of Acropora species during an extreme thermal anomaly. Frontiers in Marine Science, 4. 376.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., Stone, David A.J., and Strugnell, Jan M. (2017) The effect of commercial, natural and grape seed extract supplemented diets on gene expression signatures and survival of greenlip abalone (Haliotis laevigata) during heat stress. Aquaculture, 479. pp. 798-807.

Scott, Molly, Heupel, Michelle, Tobin, Andrew, and Pratchett, Morgan (2017) A large predatory reef fish species moderates feeding and activity patterns in response to seasonal and latitudinal temperature variation. Scientific Reports, 7. 12966.

Vaughan, David B., and Christison, Kevin W. (2017) Anoplodiscus Sonsino, 1890 (Monogenea: Anoplodiscidae): a new Australian species, and the first African record from South African hosts. Systematic Parasitology, 94 (8). pp. 891-906.

Fabricius, Katharina E., Noonan, Sam H.C., Abrego, David, Harrington, Lindsay, and De'Ath, Glenn (2017) Low recruitment due to altered settlement substrata as primary constraint for coral communities under ocean acidification. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1862).

Sih, Tiffany L., Cappo, Mike, and Kingsford, Michael J. (2017) Deep-reef fish assemblages of the Great Barrier Reef shelf-break (Australia). Scientific Reports, 7. 10886.

Rowen, David J., Templeman, Michelle A., and Kingsford, Michael J. (2017) Herbicide effects on the growth and photosynthetic efficiency of Cassiopea maremetens. Chemosphere, 182. pp. 143-148.

Carter, A.B., Davies, C.R., Emslie, M.J., Mapstone, B.D., Russ, G.R., Tobin, A.J., and Williams, A.J. (2017) Reproductive benefits of no-take marine reserves vary with region for an exploited coral reef fish. Scientific Reports, 7. 9693. pp. 1-12.

Castanho, S., Califano, G., Soares, F., Costa, R., Mata, L., Pousão-Ferreira, P., and Ribeiro, L. (2017) The effect of live feeds bathed with the red seaweed Asparagopsis armata on the survival, growth and physiology status of Sparus aurata larvae. Fish Physiology and Biochemistry, 43 (4). pp. 1043-1054.

Heindler, Franz M., Alajmi, Fahad, Huerlimann, Roger, Zeng, Chaoshu, Newman, Stephen J., Vamvounis, George, and van Herwerden, Lynne (2017) Toxic effects of polyethylene terephthalate microparticles and Di(2-ethylhexyl)phthalate on the calanoid copepod, Parvocalanus crassirostris. Ecotoxicology and Environmental Safety, 141. pp. 298-305.

Long, Xiaowen, Wu, Xugan, Zhao, Lei, Ye, Haihui, Cheng, Yongxu, and Zeng, Chaoshu (2017) Effects of salinity on gonadal development, osmoregulation and metabolism of adult male Chinese mitten crab, Eriocheir sinensis. PLoS ONE, 12 (6). e0179036. pp. 1-19.

Shimada, Takahiro, Limpus, Colin, Jones, Rhondda, and Hamann, Mark (2017) Aligning habitat use with management zoning to reduce vessel strike of sea turtles. Ocean & Coastal Management, 142. pp. 163-172.

Palma, H., Killoran, E., Sheehan, M., Berner, F., and Heimann, K. (2017) Assessment of microalga biofilms for simultaneous remediation and biofuel generation in mine tailings water. Bioresource Technology, 234. pp. 327-335.

Dulvy, Nicholas K., Simpfendorfer, Colin A., Davidson, Lindsay N.K., Fordham, Sonja V., Bräutigam, Amie, Sant, Glenn, and Welch, David J. (2017) Challenges and priorities in shark and ray conservation. Current Biology, 27 (11). R565-R572.

Hughes, Terry P., Barnes, Michele L., Bellwood, David R., Cinner, Joshua E., Cumming, Graeme S., Jackson, Jeremy B.C., Kleypas, Joanie, van de Leemput, Ingrid A., Lough, Janice M., Morrison, Tiffany H., Palumbi, Stephen R., van Nes, Egbert H., and Scheffer, Marten (2017) Coral reefs in the Anthropocene. Nature, 546 (7656). pp. 82-90.

Messmer, Vanessa, Pratchett, Morgan S., Hoey, Andrew S., Tobin, Andrew J., Coker, Darren J., Cooke, Steven J., and Clark, Timothy D. (2017) Global warming may disproportionately affect larger adults in a predatory coral reef fish. Global Change Biology, 23 (6). pp. 2230-2240.

Smart, Jonathan J., Chin, Andrew, Baje, Leontine, Tobin, Andrew J., Simpfendorfer, Colin A., and White, William T. (2017) Life history of the silvertip shark Carcharhinus albimarginatus from Papua New Guinea. Coral Reefs, 36 (2). pp. 577-588.

Lawton, Rebecca J., Paul, Nicholas A., Marshall, Dustin J., and Monro, Keyne (2017) Limited evolutionary responses to harvesting regime in the intensive production of algae. Journal of Applied Phycology, 29 (3). pp. 1449-1459.

Trinks, Tobias P., Blake, Denise F., Young, Derelle A., Thistlethwaite, Ken, and Vangaveti, Venkat N. (2017) Transcutaneous oximetry measurements of the leg: comparing different measuring equipment and establishing values in healty young adults. Diving and Hyperbaric Medicine, 47 (2). pp. 82-87.

Bastos Gomes, G., Jerry, D.R., Miller, T.L., and Hutson, K.S. (2017) Current status of parasitic ciliates Chilodonella spp. (Phyllopharyngea: Chilodonellidae) in freshwater fish aquaculture. Journal of Fish Diseases, 40 (5). pp. 703-715.

Sparrow, Leanne, Momigliano, Paolo, Russ, Garry R., and Heimann, Kirsten (2017) Effects of temperature, salinity and composition of the dinoflagellate assemblage on the growth of Gambierdiscus carpenteri isolated from the Great Barrier Reef. Harmful Algae, 65. pp. 52-60.

Chidambarampadmavathy, Karthigeyan, Karthikeyan, Obulisamy Parthiba, and Heimann, Kirsten (2017) Sustainable bio-plastic production through landfill methane recycling. Renewable and Sustainable Energy Reviews, 71. pp. 555-562.

Kingsford, M.J., O'Callaghan, M.D., Liggens, L., and Gerlach, Gabriele (2017) The short-lived neon damsel Pomacentrus coelestis: implications for population dynamics. Journal of Fish Biology, 90 (5). pp. 2041-2059.

Duy, Nguyen Dinh Quang, Francis, David S., and Southgate, Paul C. (2017) The nutritional value of live and concentrated micro-algae for early juveniles of sandfish, Holothuria scabra. Aquaculture, 473. pp. 97-104.

Manickam, Appukutty, Marshman, Laurence A.G., and Johnston, Ross (2017) Membrane surface area to volume ratio in chronic subdural hematomas: critical size and potential postoperative target. World Neurosurgery, 100. pp. 256-260.

Hempson, Tessa N., Graham, Nicholas A.J., MacNeil, M. Aaron, Williamson, David H., Jones, Geoffrey P., and Almany, Glenn (2017) Coral reef mesopredators switch prey, shortening food chains, in response to habitat degradation. Ecology and Evolution, 7 (8). pp. 2626-2635.

Bastos Gomes, Giana, Miller, Terrence L., Vaughan, David B., Jerry, Dean R., McCowan, Christina, Bradley, Tracey L., and Hutson, Kate S. (2017) Evidence of multiple species of Chilodonella (Protozoa, Ciliophora) infecting Australian farmed freshwater fishes. Veterinary Parasitology, 237. pp. 8-16.

Hernández-Chea, Roderico, Jiménez-Rocha, Ana Eugenia, Castro, Ruth, Blair, David, and Dolz, Gaby (2017) Morphological and molecular characterization of the metacercaria of Paragonimus caliensis, as a separate species from P. mexicanus in Costa Rica. Parasitology International, 66 (2). pp. 126-133.

Strugnell, Jan M., Hall, Nathan E., Vecchione, Michael, Fuchs, Dirk, and Allcock, A. Loiuse (2017) Whole mitochondrial genome of the Ram's Horn Squid shines light on the phylogenetic position of the monotypic order Spirulida (Haeckel, 1896). Molecular Phylogenetics and Evolution, 109. pp. 296-301.

Angell, Alex R., Paul, Nicholas A., and de Nys, Rocky (2017) A comparison of protocols for isolating and concentrating protein from the green seaweed Ulva ohnoi. Journal of Applied Phycology, 29 (2). pp. 1011-1026.

Pecl, Gretta, Araújo, Miguel B., Bell, Johann D., Blanchard, Julia, Bonebrake, Timothy C., Chen, I-Ching, Clark, Timothy D., Colwell, Robert K., Danielsen, Finn, Evengård, Birgitta, Falconi, Lorena, Ferrier, Simon, Frusher, Stewart, Garcia, Raquel A., Griffis, Roger B., Hobday, Alistair J., Janion-Scheepers, Charlene, Jarzyna, Marta A., Jennings, Sarah, Lenoir, Jonathan, Linnetved, Hlif I., Martin, Victoria Y., McCormack, Phillipa C., McDonald, Jan, Mitchell, Nicola J., Mustonen, Tero, Pandolfi, John M., Pettorelli, Nathalie, Popova, Ekaterina, Robinson, Sharon A., Scheffers, Brett R., Shaw, Justine D., Sorte, Cascade J.B., Strugnell, Jan, Sunday, Jennifer M., Tuanmu, Mao-Ning, Vergés, Adriana, Villanueva, Cecilia, Wernberg, Thomas, Wapstra, Erik, and Williams, Stephen E. (2017) Biodiversity redistribution under climate change: impacts on ecosystems and human well-being. Science, 355. 6332.

Eldridge, Mark D.B., Miller, Emily J., Neaves, Linda E., Zenger, Kyall R., and Herbert, Catherine (2017) Extensive genetic differentiation detected within a model marsupial, the tammar wallaby (Notamacropus eugenii). PLoS ONE, 12 (3). e0172777. pp. 1-23.

Peixoto, Raquel S., Rosado, Phillipe M., de Assis Leite, Deborah Catharine, Rosado, Alexandre S., and Bourne, David G. (2017) Beneficial microorganisms for corals (BMC): proposed mechanisms for coral health and resilience. Frontiers in Microbiology, 8. 341.

Romano, Nicholas, and Zeng, Chaoshu (2017) Cannibalism of decapod crustaceans and implications for their aquaculture: a review of its prevalence, influencing factors, and mitigating methods. Reviews in Fisheries Science & Aquaculture, 25 (1). pp. 42-69.

Basiita, Rose Komugisha, Zenger, Kyall Richard, and Jerry, Dean Robert (2017) Populations genetically rifting within a complex geological system: the case of strong structure and low genetic diversity in the migratory freshwater catfish, Bagrus docmak, in East Africa. Ecology and Evolution, 7 (16). pp. 6172-6187.

Gibbin, Emma M., Chakravarti, Leela J., Jarrold, Michael D., Christen, Felix, Turpin, Vincent, N'Siala, Gloria Massamba, Blier, Pierre U., and Calosi, Piero (2017) Can multi-generational exposure to ocean warming and acidification lead to the adaptation of life history and physiology in a marine metazoan? Journal of Experimental Biology, 220 (4). pp. 551-563.

Califano, Gianmaria, Castanho, Sara, Soares, Florbela, Ribeiro, Laura, Cox, Cymon J., Rodrigues da Mata, Leonardo, and Costa, Rodrigo (2017) Molecular taxonomic profiling of bacterial communities in a gilthead seabream (Sparus aurata) hatchery. Frontiers In Microbiology, 8. 204.

Simpfendorfer, Colin A., and Dulvy, Nicholas K. (2017) Bright spots of sustainable shark fishing. Current Biology, 27 (3). R97-R98.

Chang, Gouliang, Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, and Yu, Zhiyong (2017) Reproductive performance, offspring quality, proximate and fatty acid composition of normal and precocious Chinese mitten crab Eriocheir sinensis. Aquaculture, 469. pp. 137-143.

Clark, Timothy D., Messmer, Vanessa, Tobin, Andrew J., Hoey, Andrew S., and Pratchett, Morgan S. (2017) Rising temperatures may drive fishing-induced selection of low-performance phenotypes. Scientific Reports, 7. 40571.

Raeymaekers, Joost A.M., Chaturvedi, Anurag, Hablützel, Pascal I., Verdonck, Io, Hellemans, Bart, Maes, Gregory, De Meester, Luc, and Volckaert, Filip A.M. (2017) Adaptive and non-adaptive divergence in a common landscape. Nature Communications, 8. 267.

D'Alberto, Brooke M., Chin, Andrew, Smart, Jonathan J., Baje, Leontine, White, William, and Simpfendorfer, Colin A. (2017) Age, growth and maturity of oceanic whitetip shark (Carcharhinus longimanus) from Papua New Guinea. Marine and Freshwater Research, 68 (6). pp. 1118-1129.

Blowes, Shane A., Pratchett, Morgan S., and Connolly, Sean R. (2017) Aggression, interference, and the functional response of coral-feeding butterflyfishes. Oecologia, 184 (3). pp. 675-684.

McCormick, Mark I., Barry, Randall P., and Allan, Bridie J.M. (2017) Algae associated with coral degradation affects risk assessment in coral reef fishes. Scientific Reports, 7. 16937.

Tebbett, Sterling B., Goatley, Christopher H.R., and Bellwood, David R. (2017) Algal turf sediments and sediment production by parrotfishes across the continental shelf of the Northern Great Barrier Reef. PLoS One, 12 (1). e0170854.

Vikesa, Vibeke, Nankervis, Leo, and Hevroy, Ernst Morten (2017) Appetite, metabolism and growth regulation in Atlantic salmon (Salmo salar L.) exposed to hypoxia at elevated seawater temperature. Aquaculture Research, 48. pp. 4086-4101.

Trave, Claudia, Brunnschweiler, Juerg, Sheaves, Marcus, Diedrich, Amy, and Barnett, Adam (2017) Are we killing them with kindness? Evaluation of sustainable marine wildlife tourism. Biological Conservation, 209. pp. 211-222.

Page, C.A., Field, S.N., Pollock, F.J., Lamb, J.B., Shedrawi, G., and Wilson, S.K. (2017) Assessing coral health and disease from digital photographs and in situ surveys. Environmental Monitoring and Assessment, 189. 18.

Schlaff, Audrey M., Heupel, Michelle R., Udyawer, Vinay, and Simpfendorfer, Colin A. (2017) Biological and environmental effects on activity space of a common reef shark on an inshore reef. Marine Ecology - Progress Series, 571. pp. 169-181.

Pratchett, Morgan S., Cowan, Zara-Louise, Nadler, Lauren E., Caballes, Ciemon F., Hoey, Andrew S., Messmer, Vanessa, Fletcher, Cameron S., Westcott, David A., and Ling, Scott D. (2017) Body size and substrate type modulate movement by the western Pacific crown-of-thorns starfish, Acanthaster solaris. PLoS ONE, 12 (9). e0180805.

Morse, Peter, Zenger, Kyall R., McCormick, Mark I., Meekan, Mark G., and Huffard, Christine L. (2017) Chemical cues correlate with agonistic behaviour and female mate choice behaviour in the southern blue-ringed Octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Journal of Molluscan Studies, 83 (1). pp. 79-87.

Vaughan, David Brendan, Grutter, Alexandra Sara, Costello, Mark John, and Hutson, Kate (2017) Cleaner fish and shrimp diversity and a critical evaluation of cleaning symbiosis. Fish and Fisheries, 18 (4). pp. 698-716.

Strugnell, Jan M., Allcock, A. Louise, and Watts, Phillip C. (2017) Closely related octopus species show different spatial genetic structures in response to the Antarctic seascape. Ecology and Evolution, 7 (19). pp. 8087-8099.

Noble, T.H., Coman, G.J., Cowley, J.A., Wade, N., Sellars, M., and Jerry, D.R. (2017) Comparison of methods for uniformly challenging Black Tiger shrimp (Penaeus monodon) with gill-associated virus. Aquaculture, 473. pp. 191-196.

Chivers, Douglas P., McCormick, Mark I., Warren, Donald T., Allan, Bridie J. M., Ramasamy, Ryan A., Arvizu, Brittany K., Glue, Matthew, and Ferrari, Maud C.O. (2017) Competitive superiority versus predation savvy: the two sides of behavioural lateralization. Animal Behaviour, 130. pp. 9-15.

Ondhoro, C.C., Masembe, C., Maes, G.E., Nkalubo, N.W., Walakira, J.K., Mwanja, M.T., Naluwairo, J., and Efitre, J. (2017) Condition factor, Length - Weight relationship, and the fishery of Barbus altianalis (Boulenger 1900) in Lakes Victoria and Edward basins of Uganda. Environmental Biology of Fishes, 100 (2). pp. 99-110.

Macdonald, Catherine, Gallagher, Austin J., Barnett, Adam, Brunnschweiler, Juerg, Shiffman, David S., and Hammerschlag, Neil (2017) Conservation potential of apex predator tourism. Biological Conservation, 215. pp. 132-141.

Militz, Thane A., Foale, Simon, Kinch, Jeff, and Southgate, Paul C. (2017) Consumer perspectives on theoretical certification schemes for the marine aquarium trade. Fisheries Research, 193. pp. 33-42.

Brooker, Rohan M., Sih, Tiffany L., and Dixson, Danielle (2017) Contact with seaweed alters prey selectivity in a coral-feeding reef fish. Marine Ecology - Progress Series, 580. pp. 239-244.

Pollock, F. Joseph, Katz, Sefano M., van de Water, Jeroen A.J.M., Davies, Sarah W., Hein, Margaux, Torda, Gergely, Matz, Mikhail V., Beltran, Victor H., Buerger, Patrick, Puill-Stephan, Eneour, Abrego, David, Bourne, David G., and Willis, Bette L. (2017) Coral larvae for restoration and research: a large-scale method for rearing Acropora millepora larvae, inducing settlement, and establishing symbiosis. PeerJ, 5. e3732.

Barton, Jonathan A., Willis, Bette L., and Hutson, Kate S. (2017) Coral propagation: a review of techniques for ornamental trade and reef restoration. Reviews in Aquaculture, 9 (3). pp. 238-256.

Chin, A., Simpfendorfer, C.A., White, W.T., Wardell, G.J., McAuley, R.B., and Heupel, M.R. (2017) Crossing lines: a multidisciplinary framework for assessing connectivity of hammerhead sharks across jurisdictional boundaries. Scientific Reports, 7. 46061.

Karthikeyan, Obulisamy Parthiba, Nadarajan, Saravanan, Cirés, Samuel, Alvarez-Roa, Carlos, Razaghi, Ali, Chidambarampadmavathy, Karthigeyan, Velu, Chinnathambi, Subashchandrabose, Gobalakrishnan, and Heimann, Kirsten (2017) Culture scale-up and immobilisation of a mixed methanotrophic consortium for methane remediation in pilot-scale bio-filters. Environmental Technology, 38 (4). pp. 474-482.

Taylor-Brown, Alyce, Pillonel, Trestan, Bridle, Andrew, Qi, Weihong, Bachmann, Nathan L., Miller, Terrence L., Greub, Gilbert, Nowak, Barbara, Seth-Smith, Helena M.B., Vaughan, Lloyd, and Polkinghorne, Adam (2017) Culture-independent genomics of a novel chlamydial pathogen of fish provides new insight into host-specific adaptations utilized by these intracellular bacteria. Environmental Microbiology, 19 (5). pp. 1899-1913.

Humanes, Adriana, Ricardo, Gerard F., Willis, Bette L., Fabricius, Katharina E., and Negri, Andrew P. (2017) Cumulative effects of suspended sediments, organic nutrients and temperature stress on early life history stages of the coral Acropora tenuis. Scientific Reports, 7. 44101.

Baird, Andrew H., Hoogenboom, Mia O., and Huang, Danwei (2017) Cyphastrea salae, a new species of hard coral from Lord Howe Island, Australia (Scleractinia, Merulinidae). ZooKeys, 662. pp. 49-66.

Ferrari, Maud C.O., McCormick, Mark I., Mitchell, Matthew D., Allan, Bridie J.M., Gonçalves, Emanuel J., and Chivers, Douglas P. (2017) Daily variation in behavioural lateralization is linked to predation stress in a coral reef fish. Animal Behaviour, 133. pp. 189-193.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Depth distribution and abundance of a coral-associated reef fish: roles of recruitment and post-recruitment processes. Coral Reefs, 36 (1). pp. 157-166.

Jarrold, Michael D., Humphrey, Craig, McCormick, Mark I., and Munday, Philip L. (2017) Diel CO2 cycles reduce severity of bahavioural abnormalities in coral reef fish under ocean acidification. Scientific Reports, 7.

Cipresso Pereira, Pedro Henrique, Bezerra dos Santos, Marcus Vinicius, Lippi, Daniel Lino, de Paula Silva, Pedro Henrique, and Barros, Breno (2017) Difference in the trophic structure of fish communities between artificial and natural habitats in a tropical estuary. Marine and Freshwater Research, 68 (3). pp. 473-483.

Neave, Matthew J., Rachmawati, Rita, Xun, Liping, Michell, Craig T., Bourne, David G., Apprill, Amy, and Voolstra, Christian R. (2017) Differential specificity between closely related corals and abundant Endozoicomonas endosymbionts across global scales. ISME Journal: multidisciplinary journal of microbial ecology, 11 (1). pp. 186-200.

Mooney, Christopher J., and Kingsford, Michael J. (2017) Discriminating populations of medusae (Chironex fleckeri, Cubozoa) using statolith microchemistry. Marine and Freshwater Research, 68. pp. 1144-1152.

Marcelino, Vanessa Rossetto, Morrow, Kathleen M., van Oppen, Madeleine J.H., Bourne, David G., and Verbruggen, Heroen (2017) Diversity and stability of coral endolithic microbial communities at a naturally high p CO2 reef. Molecular Ecology, 26 (19). pp. 5344-5357.

Eddy, Tyler D., Lotze, Heike K., Fulton, Elizabeth A., Coll, Marta, Ainsworth, Cameron H., de Araújo, Júlio Neves, Bulman, Catherine M., Bundy, Alida, Christensen, Villy, Field, John C., Gribble, Neil A., Hasan, Mejs, Mackinson, Steve, and Townsend, Howard (2017) Ecosystem effects of invertebrate fisheries. Fish and Fisheries, 18 (1). pp. 40-53.

Ram, Ravinesh, Chand, Roveena V., Forrest, Andrew, and Southgate, Paul C. (2017) Effect of processing method on quality, texture, collagen and amino acid composition of sandfish (Holothuria scabra). LWT - Food Science and Technology, 86. pp. 261-269.

Pratchett, Morgan S., Cameron, Darren S., Donelson, Jennifer, Evans, Louisa, Frisch, Ashley J., Hobday, Alistair J., Hoey, Andrew S., Marshall, Nadine A., Messmer, Vanessa, Munday, Philip L., Pears, Rachel, Pecl, Gretta, Reynolds, Adam, Scott, Molly, Tobin, Andrew, Tobin, Renae, Welch, David J., and Williamson, David H. (2017) Effects of climate change on coral grouper (Plectropomus spp.) and possible adaptation options. Reviews in Fish Biology and Fisheries, 27. pp. 297-316.

McKnight, Donald T., Schwarzkopf, Lin, Alford, Ross A., Bower, Deborah S., and Zenger, Kyall R. (2017) Effects of emerging infectious diseases on host population genetics: a review. Conservation Genetics, 18. pp. 1235-1245.

Wang, Guizhong, Xu, Jie, Jia, Qilong, Zeng, Chaoshu, Wu, Lisheng, and Wu, Dingxun (2017) Effects of microalgae as diets on the survival, development and fecundity of a pelagic cyclopoid copepod Apocyclops borneoensis. Journal of the Marine Biological Association of the United Kingdom, 97 (6). pp. 1251-1257.

Wu, Xugan, Zeng, Chaoshu, and Southgate, Paul C. (2017) Effects of starvation on survival, biomass, and lipid composition of newly hatched larvae of the blue swimmer crab, Portunus pelagicus (Linnaeus, 1758). Aquaculture International, 25 (1). pp. 447-461.

Humanes Schumann, Adriana, Fink, Artur, Willis, Bette L., Fabricius, Katharina E., de Beer, Dirk, and Negri, Andrew P. (2017) Effects of suspended sediments and nutrient enrichment on juvenile corals. Marine Pollution Bulletin, 125 (1-2). pp. 166-175.

Moyano, Marta, Candebat, Caroline, Ruhbaum, Yannick, Álvarez-Fernández, Santiago, Claireaux, Guy, Zambonino-Infante, José Luis, and Peck, Myron A. (2017) Effects of warming rate, acclimation temperature and ontogeny on the critical thermal maximum of temperate marine fish larvae. PLoS ONE, 12 (7). e0179928.

Souza, Carla A., Murphy, Nicholas, Villacorta-Rath, Cecilia, Woodings, Laura N., Ilyushkina, Irina, Hernandez, Cristian E., Green, Bridget S., Bell, James J., and Strugnell, Jan (2017) Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus). Scientific Reports, 7 (1). 6781.

Nowland, Samantha J., Southgate, Paul C., Basiita, Rose K., and Jerry, Dean R. (2017) Elucidation of fine-scale genetic structure of sandfish (Holothuria scabra) populations in Papua New Guinea and northern Australia. Marine and Freshwater Research, 68 (10). pp. 1901-1911.

Everingham, Yvette L., Gyuris, Emma, and Connolly, Sean R. (2017) Enhancing student engagement to positively impact mathematics anxiety, confidence and achievement for interdisciplinary science subjects. International Journal of Mathematical Education in Science and Technology, 48 (8). pp. 1153-1165.

Kerry, James T., and Bellwood, David R. (2017) Environmental drivers of sheltering behaviour in large reef fishes. Marine Pollution Bulletin, 125 (1-2). pp. 254-259.

Elumalai, Punniyakotti, Parthipan, Punniyakotti, Obulisamy, Karthikeyan Parthiba, and Rajasekar, Aruliah (2017) Enzyme-mediated biodegradation of long-chain n-alkanes (C₃₂ and C₄₀) by thermophilic bacteria. 3 Biotech, 7. 116.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., and Strugnell, Jan M. (2017) Epipodial tentacle gene expression and predetermined resilience to summer mortality in the commercially important greenlip abalone, Haliotis laevigata. Marine Biotechnology, 19 (2). pp. 191-205.

Moorhead, Jonathan A., and Zeng, Chaoshu (2017) Establishing larval feeding regimens for the Forktail Blenny Meiacanthus atrodorsalis (Gunther, 1877): effects of Artemia strain, time of prey switch and co-feeding period. Aquaculture Research, 48 (8). pp. 4321-4333.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., and Webster, Nicole S. (2017) Establishing microbial baselines to identify indicators of coral reef health. Microbiology Australia, 39 (1). pp. 42-46.

Hillen, J.E.J., Coscia, I., Vandeputte, M., Herten, K., Hellemans, B., Maroso, F., Vergnet, A., Allal, F., Maes, Gregory, and Volckaert, F.A.M. (2017) Estimates of genetic variability and inbreeding in experimentally selected populations of European sea bass. Aquaculture, 479. pp. 742-749.

Dubuc, Alexia, Waltham, Nathan, Malerba, Martino, and Sheaves, Marcus (2017) Extreme dissolved oxygen variability in urbanised tropical wetlands: the need for detailed monitoring to protect nursery ground values. Estuarine, Coastal and Shelf Science, 198 (Part A). pp. 163-171.

Ahasan, Md. Shamim, Waltzek, Thomas B., Huerlimann, Roger, and Ariel, Ellen (2017) Fecal bacterial communities of wild-captured and stranded green turtles (Chelonia mydas) on the Great Barrier Reef. FEMS Microbiology Ecology, 93 (12). fix139.

McKnight, Donald T., Alford, Ross A., Hoskin, Conrad J., Schwarzkopf, Lin, Greenspan, Sasha E., Zenger, Kyall R., and Bower, Deborah S. (2017) Fighting an uphill battle: the recovery of frogs in Australia's Wet Tropics. Ecology, 98 (12). pp. 3221-3223.

Guo, Peijun, Saw, Woei L., Van Eyk, Philip J., Stechel, Ellen B., de Nys, Rocky, Ashman, Peter J., and Nathan, Graham J. (2017) Gasification reactivity and physicochemical properties of the chars from raw and torrefied wood, grape marc, and macroalgae. Energy & Fuels, 31 (3). pp. 2246-2259.

Momigliano, P., Harcourt, R., Robbins, W.D., Jaiteh, V., Mahardika, G.N., Sembiring, A., and Stow, A. (2017) Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos). Heredity, 119. pp. 142-153.

Pazmiño, Diana A., Maes, Gregory E., Simpfendorfer, Colin A., Salinas-de-León, Pelayo, and van Herwerden, Lynne (2017) Genome-wide SNPs reveal low effective population size within confined management units of the highly vagile Galapagos shark (Carcharhinus galapagensis). Conservation Genetics, 18 (5). pp. 1151-1163.

Hughes, Terry P., Kerry, James T., Álvarez-Noriega, Mariana, Alvarez-Romero, Jorge G., Anderson, Kristen D., Baird, Andrew, Babcock, Russell C., Beger, Maria, Bellwood, David, Berkelmans, Ray, Bridge, Tom C., Butler, Ian R., Byrne, Maria, Cantin, Neal E., Comeau, Steeve, Connolly, Sean, Cumming, Graeme S., Dalton, Steven J., Diaz-Pulido, Guillermo, Eakin, C. Mark, Figueira, Will F., Gilmour, James P., Harrison, Hugo B., Heron, Scott F., Hoey, Andrew S., Hobbs, Jean-Paul A., Hoogenboom, Mia O., Kennedy, Emma V., Kuo, Chao-Yang, Lough, Janice M., Lowe, Ryan J., Liu, Gang, McCulloch, Malcolm T., Malcolm, Hamish A., McWilliam, Michael J., Pandolfi, John M., Pears, Rachel J., Pratchett, Morgan S., Schoepf, Verena, Simpson, Tristan, Skirving, William J., Sommer, Brigitte, Torda, Gergely, Wachenfeld, David R., Willis, Bette L., and Wilson, Shaun (2017) Global warming and recurrent mass bleaching of corals. Nature, 543 (7645). pp. 373-377.

Cole, Andrew J., Paul, Nicholas, De Nys, Rocky, and Roberts, David A. (2017) Good for sewage treatment and good for agriculture: algal based compost and biochar. Journal of Environmental Management, 200. pp. 105-113.

McCormick, Mark I., Chivers, Douglas P., Allan, Bridie J.M., and Ferrari, Maud C.O. (2017) Habitat degradation disrupts neophobia in juvenile coral reef fish. Global Change Biology, 23. pp. 719-727.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Habitat morphology contrains the depth distribution and growth rate of a coral-associated reef fish. Marine Ecology Progress Series, 576. pp. 43-53.

Bernatchez, Louis, Wellenreuther, Maren, Araneda, Cristián, Ashton, David T., Barth, Julia M.I., Beacham, Terry D., Maes, Gregory E., Martinsohn, Jann T., Miller, Kristina M., Naish, Kerry A., Ovenden, Jennifer R., Primmer, Craig R., Suk, Ho Young, Therkildsen, Nina O., and Withler, Ruth E. (2017) Harnessing the power of genomics to secure the future of seafood. Trends in Ecology and Evolution, 32 (9). pp. 665-680.

Welch, Megan J., and Munday, Philip L. (2017) Heritability of behavioural tolerance to high CO2 in a coral reef fish is masked by nonadaptive phenotypic plasticity. Evolutionary Applications, 10 (7). pp. 682-693.

Bradley, Michael, Baker, Ronnie, and Sheaves, Marcus (2017) Hidden components in tropical seascapes: deep-estuary habitats support unique fish assemblages. Estuaries and Coasts, 40 (4). pp. 1195-1206.

Vikeså, V., Nankervis, L., and Hevrøy, E. M. (2017) High dietary energy level stimulates growth hormone receptorand feed utilization in large Atlantic salmon (Salmo salar L.) under hypoxic conditions. Aquaculture Nutrition, 23. pp. 1193-1203.

Kennington, W. Jason, Keron, Peter W., Harvey, Euan S., Wakefield, Corey B., Williams, Ashley J., Halafihi, Tuikolongahau, and Newman, Stephen J. (2017) High intra-ocean, but limited inter-ocean genetic connectivity in populations of the deep-water oblique-banded snapper Pristipomoides zonatus (Pisces: Lutjanidae). Fisheries Research, 193. pp. 242-249.

Streit, Robert P., and Bellwood, David R. (2017) High prevalence of homing behaviour among juvenile coral-reef fishes and the role of body size. Coral Reefs, 36 (4). pp. 1083-1095.

Buckley, Sarah M., Thurstan, Ruth H., Tobin, Andrew, and Pandolfi, John M. (2017) Historical spatial reconstruction of a spawning-aggregation fishery. Conservation Biology, 31 (6). pp. 1322-1332.

Sheaves, Marcus (2017) How many fish use mangroves? The 75% rule an ill-defined and poorly validated concept. Fish and Fisheries, 18 (4). pp. 778-789.

Neuditschko, Markus, Raadsma, Herman W., Khatkar, Mehar S., Jonas, Elisabeth, Steinig, Eike J., Flury, Christine, Signer-Hasler, Heidi, Frischknecht, Mirjam, von Niederhausem, Ruedi, Leeb, Tosso, and Rieder, Stefan (2017) Identification of key contributors in complex population structures. PLoS One, 12 (5). e0177638. pp. 1-19.

Priyambodo, Bayu, Jones, Clive M., and Sammut, Jesmond (2017) Improved collector design for the capture of tropical spiny lobster, Panulirus homarus and P-ornatus (Decapoda: Palinuridae), pueruli in Lombok, Indonesia. Aquaculture, 479. pp. 321-332.

Razaghi, Ali, Villacrés, Carina, Jung, Vincent, Mashkour, Narges, Butler, Michael, Owens, Leigh, and Heimann, Kirsten (2017) Improved therapeutic efficacy of mammalian expressed-recombinant interferon gamma against ovarian cancer cells. Experimental Cell Research, 359 (1). pp. 20-29.

Krueck, Nils C., Ahmadia, Gabby N., Green, Alison, Jones, Geoffrey P., Possingham, Hugh P., Riginos, Cynthia, Treml, Eric A., and Mumby, Peter J. (2017) Incorporating larval dispersal into MPA design for both conservation and fisheries. Ecological Applications, 27 (3). pp. 925-941.

McLeod, Ian M., Jones, Rhondda E., Jones, Geoffrey P., Takahashi, Miwa, and McCormick, Mark I. (2017) Interannual variation in the larval development of a coral reef fish in response to temperature and associated environmental factors. Marine Biology, 162. pp. 2379-2389.

Newman, Stephen J., Wakefield, Corey B., Williams, Ashley, O'Malley, Joseph M., Taylor, Brett M., Nicol, Simon J., Nichols, Ryan S., Hesp, S. Alex, Hall, Norm G., Hill, Nicholas, Ong, Joyce J.L., Andrews, Allen H., Wellingtion, Claire M., Harvey, Euan S., Mous, Peter, Oyafuso, Zack S., Pardee, Cassandra, Bunce, Michael, DiBattista, Joseph D., and Moore, Bradley R. (2017) International workshop on advancing methods to overcome challenges associated with life history and stock assessments of data-poor deep-water snappers and groupers. Marine Policy, 79. pp. 78-83.

McCormick, Mark I., and Allan, Bridie J.M. (2017) Interspecific differences in how habitat degradation affects escape response. Scientific Reports, 7.

Razaghi, Ali, Tan, Emylin, Lua, Linda H.L., Owens, Leigh, Karhikeyan, O.P., and Heimann, Kirsten (2017) Is Pichia pastoris a realistic platform for industrial production of recombinant human interferon gamma? Biologicals, 45. pp. 52-60.

Ramasamy, Ryan A., Allan, Bridie J.M., McCormick, Mark I., Chivers, Douglas P., Mitchell, Matthew D., and Ferrari, Maud C.O. (2017) Juvenile coral reef fish alter escape responses when exposed to changes in background and acute risk levels. Animal Behaviour, 134. pp. 15-22.

Atherton, Jennifer Ann, and McCormick, Mark Ian (2017) Kin recognition in embryonic damselfishes. Oikos, 126 (7). pp. 1062-1069.

Almany, Glenn R., Planes, Serge, Thorrold, Simon R., Berumen, Michael L., Bode, Michael, Saenz-Agudelo, Pablo, Bonin, Mary C., Frisch, Ashley J., Harrison, Hugo B., Messmer, Vanessa, Nanninga, Gerrit B., Priest, Mark A., Srinivasan, Maya, Sinclair-Taylor, Tane, Williamson, David H., and Jones, Geoffrey P. (2017) Larval fish dispersal in a coral-reef seascape. Nature Ecology & Evolution, 1 (6). pp. 1-4.

Pratchett, Morgan S., Dworjanyn, Symon, Mos, Benjamin, Caballes, Ciemon F., Thompson, Cassandra A., and Blowes, Shane (2017) Larval survivorship and settlement of crown-of-thorns starfish (Acanthaster cf. solaris) at varying algal cell densities. Diversity, 9 (1). 2. pp. 1-11.

Pinsky, Malin L., Saenz-Agudelo, Pablo, Salles, Océane C., Almany, Glenn R., Bode, Michael, Berumen, Michael L., Andréfouët, Serge, Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2017) Marine dispersal scales are congruent over evolutionary and ecological time. Current Biology, 27 (1). pp. 149-154.

Manickam, Appukutty, Marshman, Laurence A.G., Johnston, Ross, and Thomas, Piers A.W. (2017) Mathematical formulae to estimate chronic subdural haematoma volume: flawed assumption regarding ellipsoid morphology. Journal of Clinical Neuroscience, 40. pp. 39-43.

Matley, J.K., Heupel, M.R., Fisk, A.T., Simpfendorfer, C.A., and Tobin, A.J. (2017) Measuring niche overlap between co-occurring Plectropomus spp. using acoustic telemetry and stable isotopes. Marine and Freshwater Research, 68 (8). pp. 1468-1478.

Burgess, Scott C., Ryan, Will H., Blackstone, Neil W., Edmunds, Peter J., Hoogenboom, Mia O., Levitan, Don R., and Wulff, Janie L. (2017) Metabolic scaling in modular animals. Invertebrate Biology, 136 (4). pp. 456-472.

Banh, Quyen Q., Domingos, Jose A., Zenger, Kyall R., and Jerry, Dean R. (2017) Morphological changes and regulation of the genes dmrt1 and cyp11b during the sex differentiation of barramundi (Lates calcarifer Bloch). Aquaculture, 479. pp. 75-84.

Huertas, Victor, and Bellwood, David R. (2017) Mucus-secreting lips offer protection to suction-feeding corallivorous. Current Biology, 27 (11). R406-R407.

Montanari, Stefano R., Hobbs, Jean-Paul, Pratchett, Morgan S., Bay, Line K., and van Herwerden, Lynne (2017) Naturally occurring hybrids of coral reef butterflyfishes have similar fitness compared to parental species. PLoS ONE, 12 (3). e0173212.

Militz, Thane A., and Foale, Simon (2017) The "Nemo Effect": perception and reality of Finding Nemo's impact on marine aquarium fisheries. Fish and Fisheries, 18 (3). pp. 596-606.

Blowes, Shane A., Pratchett, Morgan S., and Connolly, Sean R. (2017) No change in subordinate butterflyfish diets following removal of behaviourally dominant species. Coral Reefs, 36. pp. 213-222.

Ferrari, Maud C.O., McCormick, Mark I., Allan, Bridie J.M., and Chivers, Douglas P. (2017) Not equal in the face of habitat change: closely related fishes differ in their ability to use predation-related information in degraded coral. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1852). 20162758.

Steckenreuter, Andre, Hoenner, Xavier, Huveneers, Charlie, Simpfendorfer, Colin, Buscot, Marie J., Tattersall, Katherine, Babcock, Russel, Heupel, Michelle, Meekan, Mark, van den Broek, James, McDowall, Phillip, Peddemors, Victor, and Harcourt, Robert (2017) Optimising the design of large-scale acoustic telemetry curtains. Marine and Freshwater Research, 68 (8). pp. 1403-1413.

Moore, Bradley R., Stapley, Jason M., Williams, Ashley J., and Welch, David. J. (2017) Overexploitation causes profound demographic changes to the protandrous hermaphrodite king threadfin (Polydactylus macrochir) in Queensland's Gulf of Carpentaria, Australia. Fisheries Research, 187. pp. 199-208.

Russ, Garry R., Lowe, Jake R., Rizzari, Justin R., Bergseth, Brock J., and Alcala, Angel C. (2017) Partitioning no-take marine reserve (NTMR) and benthic habitat effects on density of small and large-bodied tropical wrasses. PLoS One, 12 (12). e0188515.

Wahab, Muhammad Azmi Abdul, De Nys, Rocky, Holzman, Ross, Schneider, Caroline Luise, and Whalan, Steve (2017) Patterns of reproduction in two co-occurring Great Barrier Reef sponges. Marine and Freshwater Research, 68 (7). pp. 1233-1244.

Mattone, Carlo, and Sheaves, Marcus (2017) Patterns, drivers and implications of dissolved oxygen dynamics in tropical mangrove forests. Estuarine, Coastal and Shelf Science, 197. pp. 205-213.

Pitaksakulrat, Opal, Kiatsopit, Nadda, Laoprom, Nonglak, Webster, Bonnie L., Webster, Joanne P., Lamberton, Poppy H.L., Laha, Thewarach, Andrews, Ross H., Petney, Trevor N., Blair, David, Carlton, Elizabeth J., Spear, Robert C., and Sithithaworn, Paiboon (2017) Preliminary genetic evidence of two different populations of Opisthorchis viverrini in Lao PDR. Parasitology Research, 116 (4). pp. 1247-1256.

Connolly, Sean R., Keith, Sally A., Colwell, Robert K., and Rahbek, Carsten (2017) Process, mechanism, and modeling in macroecology. Trends in Ecology & Evolution, 32 (11). pp. 835-844.

Torda, Gergely, Donelson, Jennifer M., Aranda, Manuel, Barshis, Daniel J., Bay, Line, Berumen, Michael L., Bourne, David G., Cantin, Neal, Foret, Sylvain, Matz, Mikhail, Miller, David J., Moya, Aurelie, Putnam, Hollie M., Ravasi, Timothy, van Oppen, Madeleine J.H., Vega Thurber, Rebecca, Vidal-Dupiol, Jeremie, Voolstra, Christian R., Watson, Sue-Ann, Whitelaw, Emma, Willis, Bette L., and Munday, Philip L. (2017) Rapid adaptive responses to climate change in corals. Nature Climate Change, 7. pp. 627-636.

Russ, Garry R., and Leahy, Susannah M. (2017) Rapid decline and decadal-scale recovery of corals and Chaetodon butterflyfish on Philippine coral reefs. Marine Biology, 164 (1).

Budd, Alyssa M., Hinton, Tracey M., Tonks, Mark, Cheers, Sue, and Wade, Nicholas M. (2017) Rapid expansion of pigmentation genes in penaeid shrimp with absolute preservation of function. The Journal of Experimental Biology, 220. pp. 4109-4118.

Chakravarti, Leela J., Beltran, Victor H., and van Oppen, Madeleine J.H. (2017) Rapid thermal adaptation in photosymbionts of reef-building corals. Global Change Biology, 23 (11). pp. 4675-4688.

Chidambarampadmavathy, Karthigeyan, Obulisamy, Karthigeyan, Huerlimann, Roger, Maes, Gregory. E., and Heimann, Kirsten (2017) Responses of mixed methanotrophic consortia to variable Cu2+/Fe2+ ratios. Journal of Environmental Management, 197. pp. 159-166.

Praeger, Christina, and de Nys, Rocky (2017) Seeding filamentous Ulva tepida on free-floating surfaces: a novel cultivation method. Algal Research, 24 (Part A). pp. 81-88.

Khan, Joanna A., Goatley, Christopher H.R., Brandl, Simon J., Tebbett, Sterling B., and Bellwood, David R. (2017) Shelter use by large reef fishes: long-term occupancy and the impacts of disturbance. Coral Reefs, 36 (4). pp. 1123-1132.

van Oppen, Madeleine J.H., Gates, Ruth D., Blackall, Linda L., Cantin, Neal, Chakravarti, Leela J., Chan, Wing Y., Cormick, Craig, Crean, Angela, Damjanovic, Katarina, Epstein, Hannah, Harrison, Peter L., Jones, Thomas A., Miller, Margaret, Pears, Rachel J., Peplow, Lesa M., Raftos, David A., Schaffelke, Britta, Stewart, Kirsten, Torda, Gergely, Wachenfeld, David, Weeks, Andrew R., and Putnam, Hollie M. (2017) Shifting paradigms in restoration of the world's coral reefs. Global Change Biology, 23 (9). pp. 3437-3448.

Horwitz, Rael, Hoogenboom, Mia, and Fine, Maoz (2017) Spatial competition dynamics between reef corals under ocean acidification. Scientific Reports, 7. 40288.

Mooney, Christopher J., and Kingsford, Michael J. (2017) Statolith morphometrics as a tool to distinguish among populations of three cubozoan species. Hydrobiologia, 787 (1). pp. 111-121.

Taillebois, Laura, Barton, Diane P., Crook, David A., Saunders, Thor, Taylor, Jonathan, Hearnden, Mark, Saunders, Richard J., Newman, Stephen J,, Travers, Michael J., Welch, David J., Greig, Alan, Dudgeon, Christine, Maher, Safia, and Ovenden, Jennifer (2017) Strong population structure deduced from genetics, otolith chemistry and parasite abundances explains vulnerability to localized fishery collapse in a large Sciaenid fish, Protonibea diacanthus. Evolutionary Applications, 10 (10). pp. 978-993.

Raina, Jean-Baptiste, Clode, Peta L., Cheong, Soshan, Bougoure, Jeremy, Kilburn, Matt R., Reeder, Anthony, Forêt, Sylvain, Stat, Michael, Beltran, Victor, Thomas-Hall, Peter, Tapiolas, Dianne, Motti, Cherie M., Gong, Bill, Pernice, Mathieu, Marjo, Christopher E., Seymour, Justin R., Willis, Bette L., and Bourne, David G. (2017) Subcellular tracking reveals the location of dimethylsulfoniopropionate in microalgae and visualises its uptake by marine bacteria. eLife, 6.

Lal, Monal M., Southgate, Paul C., Jerry, Dean R., Bosserelle, Cyprien, and Zenger, Kyall R. (2017) Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera. BMC Genomics, 18. 66. pp. 1-21.

Lawson, Julia M., Fordham, Sonja V., O'Malley, Mary P., Davidson, Lindsay N.K., Walls, Rachel H.L., Heupel, Michelle, Stevens, Guy, Fernando, Daniel, Budziak, Ania, Simpfendorfer, Colin A., Ender, Anna Isabel, Francis, Malcolm P., di Sciara, Giuseppe Notarbartolo, and Dulvy, Nicholas K. (2017) Sympathy for the devil: a conservation strategy for devil and manta rays. PeerJ, 5. e3027. pp. 1-30.

Quigley, Kate M., Bay, Line K., and Willis, Bette L. (2017) Temperature and water quality-related patterns in sediment-associated Symbiodinium communities impact symbiont uptake and fitness of juveniles in the genus Acropora. Frontiers in Marine Science, 4. 401.

Udyawer, Vinay, Simpfendorfer, Colin A., Heupel, Michelle R., and Clark, Timothy D. (2017) Temporal and spatial activity-associated energy partitioning in free-swimming sea snakes. Functional Ecology, 31 (9). pp. 1739-1749.

Hagey, Travis J., Harte, Scott, Vickers, Mathew, Harmon, Luke J., and Schwarzkopf, Lin (2017) There's more than one way to climb a tree: limb length and microhabitat use in lizards with toe pads. PLoS One, 12 (9). e0184641.

Sheaves, Marcus, Hargreaves, Donna, and Buckland, Amanda (2017) Trophic guild concept: factors affecting within-guild consistency for tropical estuarine fish. Marine Ecology - Progress Series, 564. pp. 175-186.

Matley, J.K., Tobin, A.J., Simpfendorfer, C.A., Fisk, A.T., and Heupel, M.R. (2017) Trophic niche and spatio-temporal changes in the feeding ecology of two sympatric species of coral trout (Plectropomus leopardus and P-laevis). Marine Ecology-Progress Series, 563. pp. 197-210.

Schmidt, Katrin, Blanchette, Melanie L., Pearson, Richard G., Alford, Ross A., and Davis, Aaron M. (2017) Trophic roles of tadpoles in tropical Australian streams. Freshwater Biology, 62 (11). pp. 1929-1941.

Sato, Yui, Ling, Edmund Y.S., Turaev, Dmitrij, Laffy, Patrick, Weynberg, Karen D., Rattei, Thomas, Willis, Bette L., and Bourne, David G. (2017) Unraveling the microbial processes of black band disease in corals through integrated genomics. Scientific Reports, 7. 40455.

Bastos Gomes, Giana, Hutson, Kate S., Domingos, Jose A., Chung, Catherine, Hayward, Scott, Miller, Terrance L., and Jerry, Dean R. (2017) Use of environmental DNA (eDNA) and water quality data to predict protozoan parasites outbreaks in fish farms. Aquaculture, 479. pp. 467-473.

Bland, Lucie M., Regan, Tracey J., Dinh, Minh Ngoc, Ferrari, Renata, Keith, David A., Lester, Rebecca, Mouillot, David, Murray, Nicholas J., Nguyen, Hoang Anh, and Nicholson, Emily (2017) Using multiple lines of evidence to assess the risk of ecosystem collapse. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1863). 20170660.

Rocker, Melissa M., Francis, David S., Fabricius, Katharina E., Willis, Bette L., and Bay, Line K. (2017) Variation in the health and biochemical condition of the coral Acropora tenuis along two water quality gradients on the Great Barrier Reef, Australia. Marine Pollution Bulletin, 119 (2). pp. 106-119.

Parker, A.J., Goopy, J.J., Callaghan, M.J., Vermunt, J.J., and De Nys, R. (2017) Vitamin A deficiency in Bos indicus heifers fed a wheat straw diet cannot be corrected with algae lick blocks or intramuscular injectable retinyl palmitate treatments. Animal Production Science, 57. pp. 1079-1084.

Allan, Bridie J.M., Domenici, Paolo, Watson, Sue Ann, Munday, Philip L., and McCormick, Mark I. (2017) Warming has a greater effect than elevated CO2 on predator prey interactions in coral reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1857). 20171784. pp. 1-9.

Moorhead, Jonathan A., and Zeng, Chaoshu (2017) Weaning captive bred forktail blenny, Meiacanthus atrodorsalis, to a commercial formulated diet: optimizing timing, feeding frequency and ration. Aquaculture, 473. pp. 259-265.

Taylor, Matthew D., Babcock, Russel, Simpfendorfer, Colin A., and Crook, David A. (2017) Where technology meets ecology: acoustic telemetry in contemporary Australian aquatic research and management. Marine and Freshwater Research, 68 (8). pp. 1397-1402.

Pollock, F. Joseph, Wada, Naoisha, Torda, Gergely, Willis, Bette L., and Bourne, David G. (2017) White syndrome-affected corals have a distinct microbiome at disease lesion fronts. Applied and Environmental Microbiology, 83 (2). e02799-16. pp. 1-15.

Harrison, Hugo B., Berumen, Michael L., Saenz-Agudelo, Pablo, Salas, Eva, Williamson, David H., and Jones, Geoffrey P. (2017) Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish. Molecular Ecology, 26 (20). pp. 5692-5704.

Mata, Leonardo, Lawton, Rebecca J., Magnusson, Marie, Andreakis, Nikos, de Nys, Rocky, and Paul, Nicholas A. (2017) Within-species and temperature-related variation in the growth and natural products of the red alga Asparagopsis taxiformis. Journal of Applied Phycology, 29 (3). pp. 1437-1447.

Roura, Álvaro, Doyle, Stephen R., Nande, Manuel, and Strugnell, Jan M. (2017) You are what you eat: a genomic analysis of the gut microbiome of captive and wild Octopus vulgaris paralarvae and their zooplankton prey. Frontiers in Physiology, 8. 362.

Perks, S., Blake, D.F., Young, D.A., Hardman, J., Brown, L.H., Lewis, I., and Pain, T. (2017) An assessment of the performance of the Baxter elastomeric (LV10) Infusor pump under hyperbaric conditions. Diving and Hyperbaric Medicine, 47 (1). pp. 33-37.

Glasson, Christopher R.K., Sims, Ian M., Carnachan, Susan M., de Nys, Rocky, and Magnusson, Marie (2017) A cascading biorefinery process targeting sulfated polysaccharides (ulvan) from Ulva ohnoi. Algal Research, 27. pp. 383-391.

Magnusson, Marie, Yuen, Alexander K.L., Zhang, Rui, Wright, Jeffrey T., Taylor, Richard B., Maschmeyer, Thomas, and de Nys, Rocky (2017) A comparative assessment of microwave assisted (MAE) and conventional solid-liquid (SLE) techniques for the extraction of phloroglucinol from brown seaweed. Algal Research, 23. pp. 28-36.

Cole, Andrew J., Vucko, Matthew J., and de Nys, Rocky (2017) A comparative assessment on how molasses and CO2 gas prevent carbon limitation in the large-scale culture of freshwater macroalgae. Algal Research, 27. pp. 215-222.

Jones, David B., Jerry, Dean R., Khatkar, Mehar, Raadsma, Herman W., van der Steen, Hein, Prochaska, Jeffrey, Fôret, Sylvain, and Zenger, Kyall R. (2017) A comparative integrated gene-based linkage and locus ordering by linkage disequilibrium map for the Pacific white shrimp, Litopenaeus vannamei. Scientific Reports, 7. 10360.

Hill, Erin, Linacre, Adrian M.T., Toop, Simon, Murphy, Nicholas P., and Strugnell, Jan M. (2017) The complete mitochondrial genome of Axis porcinus (Mammalia: Cervidae) from Victoria, Australia, using MiSeq sequencing. Mitochondrial DNA Part B: Resources, 2 (2). pp. 453-454.

Ramsby, Blake D., Hoogenboom, Mia O., Whalan, Steve, Webster, Nicole S., and Thompson, Angus (2017) A decadal analysis of bioeroding sponge cover on the inshore Great Barrier Reef. Scientific Reports, 7. 2706.

Tebbett, Sterling B., Goatley, Christopher H.R., and Bellwood, David R. (2017) The effects of algal turf sediments and organic loads on feeding by coral reef surgeonfishes. PLoS One, 12 (1). e0169479.

Vucko, Matthew J., Magnusson, Marie, Kinley, Robert D., Villart, Céline, and de Nys, Rocky (2017) The effects of processing on the in vitro antimethanogenic capacity and concentration of secondary metabolites of Asparagopsis taxiformis. Journal of Applied Phycology, 29 (3). pp. 1577-1586.

Gibbin, Emma M., N'Siala, Gloria Massamba, Chakravarti, Leela J., Jarrold, Michael D., and Calosi, Piero (2017) The evolution of phenotypic plasticity under global change. Scientific Reports, 7. 17253.

Vucko, Matthew J., Cole, Andrew J., Moorhead, Jonathan A., Pit, Josiah, and de Nys, Rocky (2017) The freshwater macroalga Oedogonium intermedium can meet the nutritional requirements of the herbivorous fish Ancistrus cirrhosus. Algal Research-biomass Biofuels And Bioproducts, 27. pp. 21-31.

Lawton, Rebecca J., Cole, Andrew J., Roberts, David A., Paul, Nicholas A., and de Nys, Rocky (2017) The industrial ecology of freshwater macroalgae for biomass applications. Algal Research, 24 (B). pp. 486-491.

Mihalitsis, Michalis, and Bellwood, David R. (2017) A morphological and functional basis for maximum prey size in piscivorous fishes. PLoS ONE, 12 (9). e0184679.

Hein, Margaux Y., Willis, Bette L., Beeden, Roger, and Birtles, Alastair (2017) The need for broader ecological and socioeconomic tools to evaluate the effectiveness of coral restoration programs. Restoration Ecology, 25 (6). pp. 873-883.

Wu, Xugan, Liu, Meimei, Pan, Jie, Chen, Hao, Zeng, Chaoshu, and Cheng, Yongxu (2017) The ovarian development pattern of pond-reared Chinese mitten crab, Eriocheir sinensis H. Milne-Edwards, 1853. Crustaceana, 90 (4). pp. 449-470.

Chin, Andrew (2017) The private lives of sharks. White Horses, 20.

Mustika, Putu, Welters, Riccardo, Ryan, Gerard Edward, D'Lima, Coralie, Sorongon-Yap, Patricia, Jutapruet, Suwat, and Peter, Cindy (2017) A rapid assessment of wildlife tourism risk posed to cetaceans in Asia. Journal of Sustainable Tourism, 25 (8). pp. 1138-1158.

Geange, Shane W., Poulos, Davina E., Stier, Adrian C., and McCormick, Mark I. (2017) The relative influence of abundance and priority effects on colonization success in a coral-reef fish. Coral Reefs, 36. pp. 151-155.

Smith, Gregory G., Poole, Andrew J., King, Peter C., Battaglene, Stephen, Fitzgibbon, Quinn, and de Nys, Rocky (2017) The release and uptake of metals from potential biofilm inhibition products during spiny lobster (Sagmariasus verreauxi, H. Milne Edwards 1851) culture. Aquaculture Research, 48 (2). pp. 608-617.

Waltrick, Daniela S., Simpfendorfer, Colin A., and Awruch, Cynthia A. (2017) A review on the morphology of ovarian follicles in Elasmobranchs: a case study in Rhizoprionodon taylori. Journal of Morphology, 278 (4). pp. 486-499.

Hylton, S., White, W.T., and Chin, A. (2017) The sharks and rays of the Solomon Islands: a synthesis of their biological diversity, values and conservation status. Pacific Conservation Biology, 23 (4). pp. 324-334.

Bergseth, Brock J., Williamson, David H., Russ, Garry R., Sutton, Stephen G., and Cinner, Joshua E. (2017) A social-ecological approach to assessing and managing poaching by recreational fishers. Frontiers in Ecology and the Environment, 15 (2). pp. 67-73.

Casey, Jordan M., Baird, Andrew H., Brandl, Simon J., Hoogenboom, Mia O., Rizzari, Justin R., Frisch, Ashley J., Mirbach, Christopher E., and Connolly, Sean R. (2017) A test of trophic cascade theory: fish and benthic assembalges across a predator density gradient on coral reefs. Oecologia, 183 (1). pp. 161-175.

Ferreira, Luciana C., Thums, Michele, Heithaus, Michael R., Barnett, Adam, Abrantes, Kátya G., Holmes, Bonnie J., Zamora, Lara M., Frisch, Ashley J., Pepperell, Julian G., Burkholder, Derek, Vaudo, Jeremy, Nowicki, Robert, Meeuwig, Jessica, and Meekan, Mark G. (2017) The trophic role of a large marine predator, the tiger shark Galeocerdo cuvier. Scientific Reports, 7. 7641. pp. 1-14.

Barnett, A., Braccini, M., Dudgeon, C.L., Payne, N.L., Abrantes, K.G., Sheaves, M., and Snelling, E.P. (2017) The utility of bioenergetics modelling in quantifying predation rates of marine apex predators: ecological and fisheries implications. Scientific Reports, 7. 12982.

Razaghi, Ali, Owens, Leigh, and Heimann, Kirsten (2016) Review of the recombinant human interferon gamma as an immunotherapeutic: Impacts of production platforms and glycosylation. Journal of Biotechnology, 240. pp. 48-60.

Siqueira Correa, Alexandre C., Oliveira-Santos, Luiz Gustavo R., Cowman, Peter F., and Floeter, Sergio (2016) Evolutionary processes underlying latitudinal differences in reef fish biodiversity. Global Ecology and Biogeography, 25 (12). pp. 1466-1476.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Size matters: male and female mate choice leads to size-assortative pairing in a coral reef cardinalfish. Behavioral Ecology, 27 (6). pp. 1585-1591.

Nguyen Dinh Quang, Duy, Francis, David S., Pirozzi, Igor, and Southgate, Paul C. (2016) Use of micro-algae concentrates for hatchery culture of sandfish, Holothuria scabra. Aquaculture, 464. pp. 145-152.

Taylor, S.M., Harry, A.V., and Bennett, M.B. (2016) Living on the edge: latitudinal variations in the reproductive biology of two coastal species of sharks. Journal of Fish Biology, 89 (5). pp. 2399-2418.

Berry, Kathryn L.E., Hoogenboom, Mia O., Brinkman, Diane L., Burns, Kathryn A., and Negri, Andrew P. (2016) Effects of coal contamination on early life history processes of a reef-building coral, Acropora tenuis. Marine Pollution Bulletin, 114 (1). pp. 505-514.

Kinley, Robert D., Vucko, Matthew J., Machado, Lorenna, and Tomkins, Nigel W. (2016) In vitro evaluation of the antimethanogenic potency and effects on fermentation of individual and combinations of marine macroalgae. American Journal of Plant Sciences, 7 (14). pp. 2038-2054.

Warren, Donald T., Donelson, Jennifer M., McCormick, Mark I., Ferrari, Maud C.O., and Munday, Philip L. (2016) Duration of exposure to elevated temperature affects competitive interactions in juvenile reef fishes. PLoS ONE, 11 (10). e1064505. pp. 1-13.

Machado, Lorenna, Magnusson, Marie, Paul, Nicholas A., Kinley, Robert, de Nys, Rocky, and Tomkins, Nigel (2016) Identification of bioactives from the red seaweed Asparagopsis taxiformis that promote antimethanogenic activity in vitro. Journal of Applied Phycology, 28 (5). pp. 3117-3126.

Lienart, Govinda D.H., Ferrari, Maud C.O., and McCormick, Mark I. (2016) Thermal environment and nutritional condition affect the efficacy of chemical alarm cues produced by prey fish. Environmental Biology of Fishes, 99 (10). pp. 729-739.

Brooker, Rohan M., Feeney, William E., White, James R., Manassa, Rachel P., Johansen, Jacob L., and Dixson, Danielle L. (2016) Using insights from animal behaviour and behavioural ecology to inform marine conservation initiatives. Animal Behaviour, 120. pp. 211-221.

Nadler, Lauren E., Killen, Shaun S., McClure, Eva C., Munday, Philip L., and McCormick, Mark I. (2016) Shoaling reduces metabolic rate in a gregarious coral reef fish species. Journal of Experimental Biology, 219 (18). pp. 2802-2805.

Malerba, Martino E., Heimann, Kirsten, and Connolly, Sean R. (2016) Improving dynamic phytoplankton reserve-utilization models with an indirect proxy for internal nitrogen. Journal of Theoretical Biology, 404. pp. 1-9.

Meyer, Lauren, Capper, Angela, Carter, Steve, and Simpfendorfer, Colin (2016) An investigation into ciguatoxin bioaccumulation in sharks. Toxicon, 119. pp. 234-243.

Kelly, Lisa A., Heintz, Tom, Lamb, Joleah B., Ainsworth, Tracy D., and Willis, Bette L. (2016) Ecology and pathology of novel plaque-like growth anomalies affecting a reef-building coral on the Great Barrier Reef. Frontiers in Marine Science, 3. 151. pp. 1-12.

Lédée, Elodie J.I., Heupel, Michelle R., Tobin, Andrew J., Mapleston, Amos, and Simpfendorfer, Colin A. (2016) Movement patterns of two carangid species in inshore habitats characterised using network analysis. Marine Ecology Progress Series, 553. pp. 219-232.

Gao, Zhengquan, Miao, Xuexia, Zhang, Xiaowen, Wu, Guanxun, Guo, Yanyun, Wang, Miaomiao, Li, Bang, Li, Xianbo, Gao, Yuhao, Hu, Shuo, Sun, Jingtao, Cui, Jianle, Meng, Chunxiao, and Li, Yan (2016) Comparative fatty acid transcriptomic test and iTRAQ-based proteomic analysis in Haematococcus pluvialis upon salicylic acid (SA) and jasmonic acid (JA) inductions. Algal Research, 17. pp. 277-284.

Robson, Heather L.A., Noble, Tansyn H., Saunders, Richard J., Robson, Simon K.A., Burrows, Damien W., and Jerry, Dean R. (2016) Fine-tuning for the tropics: application of eDNA technology for invasive fish detection in tropical freshwater ecosystems. Molecular Ecology Resources, 16 (4). pp. 922-932.

Palacios, Maria M., Killen, Shaun S., Nadler, Lauren E., White, James R., and McCormick, Mark I. (2016) Top predators negate the effect of mesopredators on prey physiology. Journal of Animal Ecology, 85 (4). pp. 1078-1086.

Kishore, Pranesh, and Southgate, Paul C. (2016) A detailed description of pearl-sac development in the black-lip pearl oyster, Pinctada margaritifera (Linnaeus 1758). Aquaculture Research, 47 (7). pp. 2215-2226.

Cinner, Joshua Eli, Pratchett, Morgan Stuart, Graham, Nicholas Anthony James Graham, Messmer, Vanessa, Fuentes, Mariana Menezes Prata Bezerra, Ainsworth, Tracy, Ban, Natalie, Bay, Line Kolind, Blythe, Jessica, Dissard, Delphine, Dunn, Simon, Evans, Louisa, Fabinyi, Michael, Fidelman, Pedro, Figueiredo, Joana, Frisch, Ashley, Fulton, Christopher John, Hicks, Christina Chemtai, Lukoschek, Vimoksalehi, Mallela, Jenny, Moya, Aurelie, Penin, Lucie, Rummer, Jodie Lynn, Walker, Stefan, and Williamson, David Hall (2016) A framework for understanding climate change impacts on coral reef social–ecological systems. Regional Environmental Change, 16 (4). pp. 1133-1146.

Hodge, Jennifer R., and Bellwood, David R. (2016) The geography of speciation in coral reef fishes: the relative importance of biogeographical barriers in separating sister-species. Journal of Biogeography, 43 (7). pp. 1324-1335.

Hopf, Jess K., Jones, Geoffrey P., Williamson, David H., and Connolly, Sean R. (2016) Synergistic effects of marine reserves and harvest controls on the abundance and catch dynamics of a coral reef fishery. Current Biology, 26 (12). pp. 1543-1548.

Frisch, Ashley J., Rizzari, Justin R., Munkres, Katherine P., and Hobbs, Jean Paul A. (2016) Anemonefish depletion reduces survival, growth, reproduction and fishery productivity of mutualistic anemone–anemonefish colonies. Coral Reefs, 35 (2). pp. 375-386.

Bergseth, Brock J., Williamson, David H., Frisch, Ashley J., and Russ, Garry R. (2016) Protected areas preserve natural behaviour of a targeted fish species on coral reefs. Biological Conservation, 198. pp. 202-209.

Magnusson, Marie, Carl, Christina, Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2016) Seaweed salt from Ulva: a novel first step in a cascading biorefinery model. Algal Research, 16. pp. 308-316.

Simpfendorfer, Colin A., Kyne, Peter M., Noble, Tansyn H., Goldsbury, Julie, Basiita, Rose K., Lindsay, Rob, Shields, Amos, Perry, Camillus, and Jerry, Dean R. (2016) Environmental DNA detects critically endangered largetooth sawfish in the wild. Endangered Species Research, 30. pp. 109-116.

Sheaves, Marcus, Johnston, Ross, and Baker, Ronald (2016) Use of mangroves by fish: new insights from in-forest videos. Marine Ecology Progress Series, 549. pp. 167-182.

Hair, Cathy, Foale, Simon, Kinch, Jeff, Yaman, Luanah, and Southgate, Paul C. (2016) Beyond boom, bust and ban: the sandfish (Holothuria scabra) fishery in the Tigak Islands, Papua New Guinea. Regional Studies in Marine Science, 5. pp. 69-79.

Cole, Andrew, Dinburg, Yakov, Haynes, Brian S., He, Yaya, Herskowitz, Moti, Jazrawi, Christopher, Landau, Miron, Liang, Xiao, Magnusson, Marie, Maschmeyer, Thomas, Masters, Anthony F., Meiri, Nora, Neveux, Nicolas, de Nys, Rocky, Paul, Nicholas, Rabaev, Moshe, Vidruk-Nehemya, Roxana, and Yuen, Alexander K.L. (2016) From macroalgae to liquid fuel via waste-water remediation, hydrothermal upgrading, carbon dioxide hydrogenation and hydrotreating. Energy & Environmental Science, 9 (5). pp. 1828-1840.

Rhodes, K.L., Taylor, B.M., Hernandez-Ortiz, D., and Cuetos-Bueno, J. (2016) Growth and reproduction of the highfin grouper Epinephelus maculatus. Journal of Fish Biology, 88 (5). pp. 1856-1869.

Harry, Alastair V., Saunders, Richard J., Smart, Jonathan J., Yates, Peter M., Simpfendorfer, Colin A., and Tobin, Andrew J. (2016) Assessment of a data-limited, multi-species shark fishery in the Great Barrier Reef Marine Park and south-east Queensland. Fisheries Research, 177. pp. 104-115.

Kramer, M.J., Bellwood, O., and Bellwood, D.R. (2016) Foraging and microhabitat use by crustacean-feeding wrasses on coral reefs. Marine Ecology Progress Series, 548. pp. 277-282.

O'Brien, Paul A., Morrow, Kathleen M., Willis, Bette L., and Bourne, David G. (2016) Implications of ocean acidification for marine microorganisms from the free-living to the host-associated. Frontiers in Marine Science, 3. 47. pp. 1-14.

Smart, Jonathan J., Chin, Andrew, Baje, Leontine, Green, Madeline E., Appleyard, Sharon A., Tobin, Andrew J., Simpfendorfer, Colin A., and White, William T. (2016) Effects of including misidentified sharks in life history analyses: a case study on the grey reef shark Carcharhinus amblyrhynchos from Papua New Guinea. PLoS ONE, 11 (4). e0153116. pp. 1-18.

Lascelles, B.G., Taylor, P.R., Miller, M.G.R., Dias, M.P., Oppel, S., Torres, L., Hedd, A., Le Corre, Matthieu, Phillips, R.A., Shaffer, S.A., Weimerskirch, H., and Small, C. (2016) Applying global criteria to tracking data to define important areas for marine conservation. Diversity and Distributions, 22 (4). pp. 422-431.

Vij, Shubha, Kuhl, Heiner, Kuznetsova, Inna S., Komissarov, Aleksey, Yurchenko, Andrey A., Van Heusden, Peter, Singh, Siddharth, Thevasagayam, Natascha M., Prakki, Sai Rama Sridatta, Purushothaman, Kathiresan, Saju, Jolly M., Jiang, Junhui, Mbandi, Stanley Kimbung, Jonas, Mario, Hin Yan Tong, Amy, Mwangi, Sarah, Lau, Doreen, Ngoh, Si Yan, Liew, Woei Chang, Shen, Xueyan, Hon, Lawrence S., Drake, James P., Boitano, Matthew, Hall, Richard, Chin, Chen-Shan, Lachumanan, Ramkumar, Korlach, Jonas, Trifonov, Vladimir, Kabilov, Marsel, Tupikin, Alexey, Green, Darrell, Moxon, Simon, Garvin, Tyler, Sedlazeck, Fritz J., Vurture, Gregory W., Gopalapillai, Gopikrishna, Kumar Katneni, Vinaya, Noble, Tansyn H., Scaria, Vinod, Sivasubbu, Sridhar, Jerry, Dean R., O'Brien, Stephen J., Schatz, Michael C., Dalmay, Tamás, Turner, Stephen W., Lok, Si, Christoffels, Alan, and Orbán, László (2016) Chromosomal-level assembly of the Asian seabass genome using long sequence reads and multi-layered scaffolding. PLoS Genetics, 12 (4). pp. 1-35.

Priest, Mark A., Dibattista, Joseph D., Mcilwain, Jennifer L., Taylor, Brett, Hussey, Nigel E., and Berumen, Michael L. (2016) A bridge too far: Dispersal barriers and cryptic speciation in an Arabian Peninsula grouper (Cephalopholis hemistiktos). Journal of Biogeography, 43 (4). pp. 820-832.

Suárez-Morales, Eduardo, and McKinnon, David (2016) The Australian Monstrilloida (crustacea: Copepoda) II. Cymbasoma Thompson, 1888. Zootaxa, 4102 (1). pp. 1-129.

Riskas, Kimberly A., Fuentes, Mariana M.P.B., and Hamann, Mark (2016) Justifying the need for collaborative management of fisheries bycatch: a lesson from marine turtles in Australia. Biological Conservation, 196. pp. 40-47.

von Alvensleben, Nicolas, Magnusson, Marie, and Heimann, Kirsten (2016) Salinity tolerance of four freshwater microalgal species and the effects of salinity and nutrient limitation on biochemical profiles. Journal of Applied Phycology, 28 (2). pp. 861-876.

Abom, Rickard, and Schwarzkopf, Lin (2016) Short-term responses of reptile assemblages to fire in native and weedy tropical savannah. Global Ecology and Conservation, 6. pp. 58-66.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Sniffing out the competition? Juvenile coral reef damselfishes use chemical cues to distinguish the presence of conspecific and heterospecific aggregations. Behavioural Processes, 125. pp. 43-50.

Cires, Samuel, and Ballot, Andreas (2016) A review of the phylogeny, ecology and toxin production of bloom-forming Aphanizomenon spp. and related species within the Nostocales (cyanobacteria). Harmful Algae, 54. pp. 21-43.

Ow, Y.X., Vogel, N., Collier, C.J., Holtum, J.A.M., Flores, F., and Uthicke, S. (2016) Nitrate fertilisation does not enhance CO₂ responses in two tropical seagrass species. Scientific Reports, 6. 23093. pp. 1-10.

Boström-Einarsson, Lisa, and Rivera-Posada, Jairo (2016) Controlling outbreaks of the coral-eating crown-of-thorns starfish using a single injection of common household vinegar. Coral Reefs, 35 (1). pp. 223-228.

Blasco-Costa, Isabel, Cutmore, Scott C., Miller, Terrence L, and Nolan, Matthew J. (2016) Molecular approaches to trematode systematics: 'best practice' and implications for future study. Systematic Parasitology, 93 (3). pp. 295-306.

Jones, B., Smullen, R., and Carton, A.G. (2016) Flavour enhancement of freshwater farmed barramundi (Lates calcarifer), through dietary enrichment with cultivated sea lettuce, Ulva ohnoi. Aquaculture, 454. pp. 192-198.

Karthikeyan, Obulisamy Parthiba, Chidambarampadmavathy, Karthigeyan, Nadarjan, Saravanan, and Heimann, Kirsten (2016) Influence of nutrients on oxidation of low level methane by mixed methanotrophic consortia. Environmental Science and Pollution Research, 23 (5). pp. 4346-4357.

Sparrow, Leanne, and Heimann, Kirsten (2016) Key environmental factors in the management of ciguatera. Journal of Coastal Research, Special Issue 75. pp. 1007-1011.

Hughes, T.P., Cameron, D.S., Chin, A., Connolly, S.R., Day, J.C., Jones, G.P., McCook, L., McGinnity, P., Mumby, P.J., Pears, R.J., Pressey, R.L., Russ, G.R., Tanzer, J., Tobin, A., and Young, M.A.L. (2016) A critique of claims for negative impacts of Marine Protected Areas on fisheries. Ecological Applications, 26 (2). pp. 637-641.

Young, Matthew A.L., Foale, Simon, and Bellwood, David (2016) The last marine wilderness: spearfishing for trophy fishes in the Coral Sea. Environmental Conservation, 43 (1). pp. 90-95.

Bylemans, Jonas, Maes, Gregory E., Diopere, Eveline, Cariani, Alessia, Senn, Helen, Taylor, Martin I., Helyar, Sarah, Bargelloni, Luca, Bonaldo, Alessio, Carvalho, Gary, Guarniero, Ilaria, Komen, Hans, Martinsohn, Jann Th., Nielsen, Einar E., Tinti, Fausto, Volckaert, Filip A.M., and Ogden, Rob (2016) Evaluating genetic traceability methods for captive‑bred marine fish and their applications in fisheries management and wildlife forensics. Aquaculture Environment Interactions , 8. pp. 131-145.

Chin, Andrew, Heupel, Michelle R., Simpfendorfer, Colin A., and Tobin, Andrew J. (2016) Population organisation in reef sharks: new variations in coastal habitat use by mobile marine predators. Marine Ecology Progress Series, 544. pp. 197-211.

Espinoza, Mario, Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2016) Evidence of partial migration in a large coastal predator: opportunistic foraging and reproduction as key drivers? PLoS ONE, 11 (2). e0147608. pp. 1-22.

Andreakis, Nikolaos, Costello, Paul, Zanolla, Marianela, Saunders, Gary W., and Mata, Leonardo (2016) Endemic or introduced? Phylogeography of Asparagopsis (Florideophyceae) in Australia reveals multiple introductions and a new mitochondrial lineage. Journal of Phycology, 52 (1). pp. 141-147.

Lal, Monal M., Southgate, Paul C., Jerry, Dean R., and Zenger, Kyall R. (2016) Fishing for divergence in a sea of connectivity: the utility of ddRADseq genotyping in a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera. Marine Genomics, 25. pp. 57-68.

Meyer Steiger, Dagmar B., Ritchie, Scott Alex, and Laurance, Susan G.W. (2016) Land use influences mosquito communities and disease risk on remote tropical islands: a case study using a novel sampling technique. American Journal of Tropical Medicine and Hygiene, 94 (2). pp. 314-321.

D'Anastasi, B.R., van Herwerden, L., Hobbs, J.A., Simpfendorfer, C.A., and Lukoschek, V. (2016) New range and habitat records for threatened Australian sea snakes raise challenges for conservation. Biological Conservation, 194. pp. 66-70.

Mata, Leonardo, Magnusson, Marie, Paul, Nicholas A., and de Nys, Rocky (2016) The intensive land-based production of the green seaweeds Derbesia tenuissima and Ulva ohnoi: biomass and bioproducts. Journal of Applied Phycology, 28 (1). pp. 365-375.

Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2016) The protein content of seaweeds: a universal nitrogen-to-protein conversion factor of five. Journal of Applied Phycology, 28 (1). pp. 511-524.

Kishore, Pranesh, and Southgate, Paul C. (2016) The effect of different culture methods on the quality of round pearls produced by the black-lip pearl oyster Pinctada margaritifera (Linnaeus, 1758). Aquaculture, 451. pp. 65-71.

Mouillot, D., Parravicini, V., Bellwood, D.R., Leprieur, F., Huang, D., Cowman, P.F., Albouy, C., Hughes, T.P., Thuiller, W., and Guilhaumon, F. (2016) Global marine protected areas do not secure the evolutionary history of tropical corals and fishes. Nature Communications, 7. 10359. pp. 1-8.

Johansson, Charlotte L., Paul, Nicholas A., de Nys, Rocky, and Roberts, David A. (2016) Simultaneous biosorption of selenium, arsenic and molybdenum with modified algal-based biochars. Journal of Environmental Management, 165. pp. 117-123.

Steinig, Eike J., Neuditschko, Markus, Khatkar, Mehar S., Raadsma, Herman W., and Zenger, Kyall R. (2016) NETVIEW P: a network visualization tool to unravel complex population structure using genome-wide SNPs. Molecular Ecology Resources, 16 (1). pp. 216-227.

Fuentes, Marianna M.P.B., Chambers, Lynda, Chin, Andrew, Dann, Peter, Dobbs, Kirstin, Marsh, Helene, Poloczanska, Elvira S., Maison, Kim, Turner, Malcolm, and Pressey, Robert L. (2016) Adaptive management of marine mega-fauna in a changing climate. Mitigation and Adaptation Strategies for Global Change, 21 (2). pp. 209-224.

Cole, Andrew J., Neveux, Nicolas, Whelan, Anna, Morton, Jeff, Vis, Mark, de Nys, Rocky, and Paul, Nicholas A. (2016) Adding value to the treatment of municipal wastewater through the intensive production of freshwater macroalgae. Algal Research, 20. pp. 100-109.

Johnson, Johanna E., Welch, David J., Maynard, Jeffrey A., Bell, Johann D., Pecl, Gretta, Robins, Julie, and Saunders, Thor (2016) Assessing and reducing vulnerability to climate change: moving from theory to practical decision-support. Marine Policy, 74. pp. 220-229.

Chivers, Douglas P., McCormick, Mark I., Allan, Bridie J. M., Mitchell, Matthew D., Gonçalves, Emanuel J., Bryshun, Reid, and Ferrari, Maud C.O. (2016) At odds with the group: changes in lateralization and escape performance reveal conformity and conflict in fish schools. Proceedings of the Royal Society of London Series B, Biological Sciences, 283. 20161127. pp. 1-8.

Yates, Peter M., Tobin, Andrew J., Heupel, Michelle R., and Simpfendorfer, Colin A. (2016) Benefits of marine protected areas for tropical coastal sharks. Aquatic Conservation: marine and freshwater ecosystems , 26 (6). pp. 1063-1080.

Sheaves, Janine, Dingle, Liliana, and Mattone, Carlo (2016) Biotic hotspots in mangrove-dominated estuaries: macro-invertebrate aggregation in unvegetated lower intertidal flats. Marine Ecology Progress Series, 556. pp. 31-43.

Van Riper, Carena J., Sutton, Stephen, Kyle, Gerard T., Stewart, William, and Tobin, Renae C. (2016) Bridging managers’ place meanings and environmental governance of the Great Barrier Reef Marine Park. Society and Natural Resources, 29 (11). pp. 1342-1358.

Chakravarti, Leela, Jarrold, Michael D., Gibbin, Emma M., Christen, Felix, Massamba-N'Siala, Gloria, Blier, Pierre U., and Calosi, Piero (2016) Can trans-generational experiments be used to enhance species resilience to ocean warming and acidification? Evolutionary Applications, 9 (9). pp. 1133-1146.

Taillebois, Laura, Dudgeon, Christine, Maher, Safia, Crook, David A., Saunders, Thor M., Barton, Diane P., Taylor, Jonathan A., Welch, David J., Newman, Stephen J., Travers, Michael J., Saunders, Richard J., and Ovenden, Jennifer (2016) Characterization, development and multiplexing of microsatellite markers in three commercially exploited reef fish and their application for stock identification. PeerJ, 4. e2418. pp. 1-18.

Buck, Alexander C.E., Gardiner, Naomi M., and Boström-Einarsson, Lisa (2016) Citric acid injections: an accessible and efficient method for controlling outbreaks of the crown-of-thorns starfish Acanthaster cf. solaris. Diversity, 8 (28). d8040028. pp. 1-12.

He, Yaya, Liang, Xiao, Jazrawi, Christopher, Montoya, Alejandro, Yuen, Alexander, Cole, Andrew J., Neveux, Nicolas, Paul, Nicholas A., de Nys, Rocky, Maschmeyer, Thomas, and Haynes, Brian S. (2016) Continuous hydrothermal liquefaction of macroalgae in the presence of organic co-solvents. Algal Research, 17. pp. 185-195.

Matley, J.K., Tobin, A.J., Lédée, E.J.I., Heupel, M.R., and Simpfendorfer, C.A. (2016) Contrasting patterns of vertical and horizontal space use of two exploited and sympatric coral reef fish. Marine Biology, 163. 253. pp. 1-12.

Gerlach, Gabriele, Atema, Jelle, Raupach, Michael J., Deister, Fabian, Müeller, Anke, and Kingsford, Michael J. (2016) Cryptic species of cardinalfish with evidence for old and new divergence. Coral Reefs, 35 (2). pp. 437-450.

MacDonald, Chancey, Bridge, Tom C.L., and Jones, Geoffrey P. (2016) Depth, bay position and habitat structure as determinants of coral reef fish distributions: are deep reefs a potential refuge? Marine Ecology - Progress Series, 561. pp. 217-231.

Duy, Nguyen Dinh Quang, Francis, David S., and Southgate, Paul C. (2016) Development of hyaline spheres in late auriculariae of sandfish, Holothuria scabra: is it a reliable indicator of subsequent performance? Aquaculture, 465. pp. 144-151.

Matley, J.K., Fisk, A.T., Tobin, A.J., Heupel, M.R., and Simpfendorfer, C.A. (2016) Diet-tissue discrimination factors and turnover of carbon and nitrogen stable isotopes in tissues of an adult predatory coral reef fish, Plectropomus leopardus. Rapid Communications in Mass Spectrometry, 30 (1). pp. 29-44.

Brown, Kelly T., Seeto, Johnson, Lal, Monal M., and Miller, Cara E. (2016) Discovery of an important aggregation area for endangered scalloped hammerhead sharks, Sphyrna lewini, in the Rewa River estuary, Fiji Islands. Pacific Conservation Biology, 22. pp. 242-248.

Hutson, Kate S., and Boxshall, Geoffrey A. (2016) Discovery of the male of the rare caligiform copepod Kabataia Kazachenko, Korotaeva & Kurochkin, 1972 (Copepoda: Siphonostomatoida), with a reconsideration of its phylogenetic affinities. Zootaxa, 4174 (1). pp. 122-136.

McCormick, Mark I., and Lönnstedt, Oona M. (2016) Disrupted learning: habitat degradation impairs crucial antipredator responses in naive prey. Proceedings of the Royal Society of London Series B, Biological Sciences, 283. 20160441. pp. 1-8.

Angly, Florent E., Pantos, Olga, Morgan, Thomas C., Rich, Virginia, Tonin, Hemerson, Bourne, David G., Mercurio, Philip, Negri, Andrew P., and Tyson, Gene W. (2016) Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon. PeerJ, 4. e1758. pp. 1-23.

Nash, Kirsty L., Abesamis, Rene A., Graham, Nicholas A.J., McClure, Eva C., and Moland, Even (2016) Drivers of herbivory on coral reefs: species, habitat and management effects. Marine Ecology Progress Series, 554. pp. 129-140.

Hill, Nicholas J., Tobin, Andrew J., Reside, April E., Pepperell, Julian G., and Bridge, Tom C.L. (2016) Dynamic habitat suitability modelling reveals rapid poleward distribution shift in a mobile apex predator. Global Change Biology, 22 (3). pp. 1086-1096.

Ngo, Diu Thi, Wade, Nicholas, Pirozzi, Igor, and Glencross, Brett D. (2016) Effects of canola meal on growth, feed utilisation, plasma biochemistry, histology of digestive organs and hepatic gene expression of barramundi (Asian seabass; Lates calcarifer). Aquaculture, 464. pp. 95-105.

Munday, Philip L., Watson, Sue-Ann, Parsons, Darren M., King, Alicia, Barr, Neill G., McLeod, Ian M., Allan, Bridie J.M., and Pether, Steve M.J. (2016) Effects of elevated CO2 on early life history development of the yellowtail kingfish, Seriola lalandi, a large pelagic fish. ICES Journal of Marine Science, 73 (3). pp. 641-649.

Vaughan, David B., Chisholm, Leslie A., and Hansen, Haakon (2016) Electrocotyle whittingtoni n. gen., n. sp. (Monogenea: Monocotylidae: Heterocotylinae) from the gills of a captive onefin electric ray, Narke capensis (Narkidae) at Two Oceans Aquarium, Cape Town, South Africa. Parasitology Research, 115 (9). pp. 3575-3584.

Sheaves, Marcus, Coles, Rob, Dale, Pat, Grech, Alana, Pressey, Robert L., and Waltham, Nathan J. (2016) Enhancing the value and validity of EIA: serious science to protect Australia's Great Barrier Reef. Conservation Letters, 9 (5). pp. 377-383.

Pusey, Bradley J., Kennard, Mark J., Larson, Helen K., Alsop, Quentin, Hammer, Michael, and Buckle, Duncan J. (2016) Estuarine fishes of the South Alligator River, Kakadu National Park, northern Australia. Marine and Freshwater Research, 67 (12). pp. 1797-1812.

Finn, Maureen H., Lönnstedt, Oona M., Rizzari, Justin R., Jones, Geoffrey P., and Frisch, Ashley J. (2016) Experimental bleaching of a tropical sea anemone insitu. Marine Ecology, 37 (3). pp. 691-696.

Udyawer, V., Simpfendorfer, C.A., Read, M., Hamann, M., and Heupel, M.R. (2016) Exploring habitat selection in sea snakes using passive acoustic monitoring and Bayesian hierarchical models. Marine Ecology Progress Series, 546. pp. 249-262.

Epstein, Hannah E., Templeman, Michelle A., and Kingsford, Michael J. (2016) Fine-scale detection of pollutants by a benthic marine jellyfish. Marine Pollution Bulletin, 107 (1). pp. 340-346.

Salles, Océane C., Pujol, Benoit, Maynard, Jeffrey A., Almany, Glenn R., Berumen, Michael L., Jones, Geoffrey P., Saenz-agudelo, Pablo, Srinivasan, Maya, Thorrold, Simon R., and Planes, Serge (2016) First genealogy for a wild marine fish population reveals multigenerational philopatry. Proceedings of the National Academy of Sciences of the United States of America, 113 (46). pp. 13245-13250.

Sheaves, Marcus, Baker, Ronnie, Abrantes, Kátya G., and Connolly, Rod M. (2016) Fish biomass in tropical estuaries: substantial variation in food web structure, sources of nutrition and ecosystem-supporting processes. Estuaries and Coasts, 40 (2). pp. 580-593.

Militz, Thane, Kinch, Jeff, Foale, Simon, and Southgate, Paul (2016) Fish rejections in the marine aquarium trade: an initial case study raises concern for village-based fisheries. PLoS ONE, 11 (3). e0151624. pp. 1-14.

Chan, Neil C.S., Wangpraseurt, Daniel, Kuhl, Michael, and Connolly, Sean R. (2016) Flow and coral morphology control coral surface pH: implications for the effects of ocean acidification. Frontiers in Marine Science, 26. pp. 637-641.

Zhu, Youjian, Piotrowska, Patrycja, van Eyk, Philip J., Bostrom, Dan, Wu, Xuehong, Boman, Christoffer, Brostrom, Markus, Zhang, Jun, Kwong, Chi Wai, Wang, Dingbiao, Cole, Andrew J., de Nys, Rocky, Gentili, Francesco G., and Ashman, Peter J. (2016) Fluidized bed co-gasification of algae and wood pellets: gas yields and bed agglomeration analysis. Energy and Fuels, 30 (3). pp. 1800-1809.

Heinrich, Dennis D.U., Watson, Sue-Ann, Rummer, Jodie L., Brandl, Simon J., Simpfendorfer, Colin A., Heupel, Michelle R., and Munday, Philip L. (2016) Foraging behaviour of the epaulette shark Hemiscyllium ocellatum is not affected by elevated CO2. ICES Journal of Marine Science, 73 (3). pp. 633-640.

Militz, Thane A., McCormick, Mark I., Schoeman, David S., Kinch, Jeff, and Southgate, Paul C. (2016) Frequency and distribution of melanistic morphs in coexisting population of nine clownfish species in Papua New Guinea. Marine Biology, 163. 200. pp. 1-10.

Steinberg, Rosemary, van der Meer, Martin, Walker, Emily, Berumen, Michael L., Hobbs, Jean-Paul A., and van Herwerden, Lynne (2016) Genetic connectivity and self-replenishment of inshore and offshore populations of the endemic anemonefish, Amphiprion latezonatus. Coral Reefs, 35 (3). pp. 959-970.

Loughnan, Shannon R., Smith-Keune, Carolyn, Jerry, Dean R., Beheregaray, Luciano B., and Robinson, Nicholas A. (2016) Genetic diversity and relatedness estimates for captive barramundi (Lates calcarifer, Bloch) broodstock informs efforts to form a base population for selective breeding. Aquaculture Research, 47 (11). pp. 3570-3584.

Tang, Lei Stanley, Smith-Keune, Carolyn, Grice, Anthony C., Moloney, James M., and Hardesty, Britta Denise (2016) Genetic structure and diversity of the black-throated finch (Poephila cincta) across its current range. Australian Journal of Zoology, 64 (6). pp. 375-384.

Tusso, Sergio, Morcinek, Kerstin, Vogler, Catherine, Schupp, Peter J., Caballes, Ciemon F., Vargas, Sergio, and Wörheide, Gert (2016) Genetic structure of the crown-of-thorns seastar in the Pacific Ocean, with focus on Guam. PeerJ, 4. e1970. pp. 1-22.

Salles, Océane C., Saenz-Agudelo, Pablo, Almany, Glenn R., Berumen, Michael L., Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2016) Genetic tools link long-term demographic and life-history traits of anemonefish to their anemone hosts. Coral Reefs, 35. pp. 1127-1138.

Kjeldsen, Shannon R., Zenger, Kyall R., Leigh, Kellie, Ellis, William, Tobey, Jenifer, Phalen, David, Melzer, Alistair, FitzGibbon, Sean, and Raadsma, Herman W. (2016) Genome-wide SNP loci reveal novel insights into koala (Phascolarctos cinereus) population variability across its range. Conservation Genetics, 17 (2). pp. 337-353.

Obulisamy, Parthiba Karthikeyan, Sim Yan May, Jane, and Rajasekar, Balasubramanian (2016) Gradient packing bed bio-filter for landfill methane mitigation. Bioresource Technology, 217. pp. 205-209.

Mestre, Luiz A.M., Roos, Andrei L., and Rechetelo, Juliana (2016) Habitat associations of land birds in Fernando de Noronha, Brazil. Ornitologia Neotropical, 27. pp. 27-34.

Gardiner, N.M., and Jones, G.P. (2016) Habitat specialisation, site fidelity and sociality predict homing success in coral reef cardinalfish. Marine Ecology Progress Series, 558. pp. 81-96.

Tremblay, Pascal, Gori, Andrea, Maguer, Jean François, Hoogenboom, Mia, and Ferrier-Pagès, Christine (2016) Heterotrophy promotes the re-establishment of photosynthate translocation in a symbiotic coral after heat stress. Scientific Reports, 6. 38112. pp. 1-14.

Nolan, Matthew J., Cantacessi, Cinzia, Cutmore, Scott C., Cribb, Thomas H., and Miller, Terrence L. (2016) High-intensity cardiac infections of Phthinomita heinigerae n. sp (Digenea: Aporocotylidae) in the orangelined cardinalfish, Taeniamia fucata (Cantor), off Heron Island on the Great Barrier Reef. Parasitology International, 65 (5, Part A). pp. 371-377.

Hoenner, Xavier, Whiting, Scott D., Hamann, Mark, Limpus, Colin J., Hindell, Mark A., and Mcmahon, Clive R. (2016) High-resolution movements of critically endangered hawksbill turtles help elucidate conservation requirements in northern Australia. Marine and Freshwater Research, 67 (8). pp. 1263-1278.

Rueger, T., Gardiner, N.M., and Jones, G.P. (2016) Homing is not for everyone: displaced cardinalfish find a new place to live. Journal of Fish Biology, 89 (4). pp. 2182-2188.

Razaghi, Ali, Karthikeyan , O. P., Hao, H.T. Nguyen, and Heimann, Kirsten (2016) Hydrolysis treatments of fruit and vegetable waste for production of biofuel precursors. Bioresource Technology, 217. pp. 100-103.

Hamilton, Richard J., Almany, Glenn R., Stevens, Don, Bode, Michael, Pita, John, Peterson, Nate A., and Choat, J. Howard (2016) Hyperstability masks declines in bumphead parrotfish (Bolbometopon muricatum) populations. Coral Reefs, 35 (3). pp. 751-763.

Nugraha, Roni, Kamath, Sandip D., Ruethers, Thimo, Johnston, Elecia, Koeberl, Martina, Rolland, Jennifer M., O'Hehir, Robyn E., Zenger, Kyall R., and Lopata, Andreas L. (2016) Identification of novel oyster allergens using a combined transcriptomic and proteomic approach for improved component resolved diagnosis. Internal Medicine Journal, 46 (Supplement 4). P16. p. 9.

Bellchambers, Lynda M., Fisher, Emily A., Harry, Alastair V., and Travaille, Kendra L. (2016) Identifying and mitigating potential risks for Marine Stewardship Council assessment and certification. Fisheries Research, 182. pp. 7-17.

Lema, Kimberley A., Clode, Peta L., Kilburn, Matt R., Thornton, Ruth, Willis, Bette L., and Bourne, David G. (2016) Imaging the uptake of nitrogen-fixing bacteria into larvae of the coral Acropora millepora. ISME Journal, 10 (7). pp. 1804-1808.

Udyawer, Vinay, Read, Mark, Hamann, Mark, Heupel, Michelle R., and Simpfendorfer, Colin A. (2016) Importance of shallow tidal habitats as refugia from trawl fishing for sea snakes. Journal of Herpetology, 50 (4). pp. 527-533.

Wada, Naohisa, Pollock, Frederic J., Willis, Bette L., Ainsworth, Tracy, Mano, Nobuhiro, and Bourne, David G. (2016) In situ visualization of bacterial populations in coral tissues: pitfalls and solutions. PeerJ, 4. e2424.

Bourne, David G., Morrow, Kathleen M., and Webster, Nicole S. (2016) Insights into the coral microbiome: underpinning the health and resilience of reef ecosystems. Annual Review of Microbiology, 70. pp. 317-340.

Mokany, Karel, Ferrier, Simon, Connolly, Sean R., Dunstan, Piers K., Fulton, Elizabeth A., Harfoot, Michael B., Harwood, Thomas D., Richardson, Anthony J., Roxburgh, Stephen H., Scharlemann, Jörn P.W., Tittensor, Derek P., Westcott, David A., and Wintle, Brendan A. (2016) Integrating modelling of biodiversity composition and ecosystem function. Oikos, 125 (1). pp. 10-19.

Raina, Jean-Baptiste, Tapiolas, Dianne, Motti, Cherie A., Foret, Sylvain, Seemann, Torsten, Tebben, Jan, Willis, Bette L., and Bourne, David G. (2016) Isolation of an antimicrobial compound produced by bacteria associated with reef-building corals. PeerJ, 4. e2275. pp. 1-20.

Hays, Graeme C., Ferreira, Luciana C., Sequeira, Ana M.M., Meekan, Mark G., Duarte, Carlos M., Bailey, Helen, Bailleul, Fred, Bowen, W. Don, Caley, M. Julian, Costa, Daniel P., Eguíluz, Victor M., Fossette, Sabrina, Friedlaender, Ari S., Gales, Nick, Gleiss, Adrian C., Gunn, John, Harcourt, Robert, Hazen, Elliott L., Heithaus, Michael R., Heupel, Michelle, Holland, Kim, Horning, Markus, Jonsen, Ian, Kooyman, Gerald L., Lowe, Christopher G., Madsen, Peter T., Marsh, Helene, Phillips, Richard A., Righton, David, Ropert-Coudert, Yan, Sato, Katsufumi, Shaffer, Scott A., Simpfendorfer, Colin A., Sims, David W., Skomal, Gregory, Takahashi, Akinori, Trathan, Philip N., Wikelski, Martin, Womble, Jamie N., and Thums, Michele (2016) Key Questions in marine megafauna movement ecology. Trends in Ecology & Evolution, 31 (6). pp. 463-475.

Frisch, Ashley J., Cameron, Darren S., Pratchett, Morgan S., Williamson, David H., Williams, Ashley J., Reynolds, Adam D., Hoey, Andrew S., Rizzari, Justin R., Evans, Louisa, Kerrigan, Brigid, Muldoon, Geoffrey, Welch, David, and Hobbs, Jean-Paul A. (2016) Key aspects of the biology, fisheries and management of Coral grouper. Reviews in Fish Biology and Fisheries, 26 (3). pp. 303-325.

Williamson, David H., Harrison, Hugo B., Almany, Glenn R., Berumen, Michael L., Bode, Michael, Bonin, Mary C., Choukroun, Severine, Doherty, Peter J., Frisch, Ashley J., Saenz-Agudelo, Pablo, and Jones, Geoffrey P. (2016) Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park. Molecular Ecology, 25 (24). pp. 6039-6054.

Sambrook, Katie, Jones, Geoffrey P., and Bonin, Mary C. (2016) Life on the edge: coral reef fishes exhibit strong responses to a habitat boundary. Marine Ecology Progress Series, 561. pp. 203-215.

McCormick, Mark I., and Allan, Bridie J. (2016) Lionfish misidentification circumvents an optimised escape response by prey. Conservation Physiology, 4. cow064. pp. 1-9.

Albalat, Amaya, Nadler, Lauren E., Foo, Nicholas, Dick, James R., Watts, Andrew J.R., Philp, Heather, Neil, Douglas M., and Monroig, Oscar (2016) Lipid composition of oil extracted from wasted Norway lobster (Nephrops norvegicus) heads and comparison with oil extracted from Antarctic krill (Euphasia superba). Marine Drugs, 14 (12). 219. pp. 1-13.

Poulakis, Gregg R., Stevens, Philip W., Timmers, Amy A., Stafford, Christopher J., Chapman, Demian D., Feldheim, Kevin A., Heupel, Michelle R., and Curtis, Caitlin (2016) Long-term site fidelity of endangered smalltooth sawfish (Pristis pectinata) from different mothers. Fishery Bulletin, 114 (4). pp. 461-475.

Angly, Florent E., Heath, Candice, Morgan, Thomas C., Tonin, Hemerson, Rich, Virginia, Schaffelke, Britta, Bourne, David G., and Tyson, Gene W. (2016) Marine microbial communities of the Great Barrier Reef lagoon are influenced by riverine floodwaters and seasonal weather events. PeerJ, 4. e1511. pp. 1-24.

Schunter, Celia, Welch, Megan J., Ryu, Taewoo, Zhang, Huoming, Berumen, Michael L., Nilsson, Goeran E., Munday, Philip L., and Ravasi, Timothy (2016) Molecular signatures of transgenerational response to ocean acidification in a species of reef fish. Nature Climate Change, 6 (11). pp. 1014-1018.

Rodríguez-Romero, Araceli, Jarrold, Michael D., Massamba-N'Siala, Gloria, Spicer, John I., and Calosi, Piero (2016) Multi-generational responses of a marine polychaete to a rapid change in seawater pCO(2). Evolutionary Applications, 9 (9). pp. 1082-1095.

Smart, Jonathan J., Chin, Andrew, Tobin, Andrew J., and Simpfendorfer, Colin A. (2016) Multimodel approaches in shark and ray growth studies: strengths, weaknesses and the future. Fish and Fisheries, 17 (4). pp. 955-971.

Sih, Tiffany L., and Kingsford, Michael J. (2016) Near-reef elemental signals in the otoliths of settling Pomacentrus amboinensis (Pomacentridae). Coral Reefs, 35 (1). pp. 303-315.

Delghandi, M., Goddard, S., Jerry, D.R., Dao, H.T., Al Hinai, M.S.N., Al-Amry, W., and Al-Marzouqi, A. (2016) Novel genomic microsatellite markers for genetic population and diversity studies of tropical scalloped spiny lobster (Panulirus homarus) and their potential application in related Panulirus species. Genetics and Molecular Research, 15 (2). pp. 1-5.

Delghandi, Madjid, Afzal, Hasifa, Al Hinai, Manal Saif Nasser, Al-Breiki, Rafaida Dhuhai Gharib, Jerry, Dean R., and Dao, Hoc Tan (2016) Novel polymorphic microsatellite markers for Panulirus ornatus and their cross-species primer amplification in Panulirus homarus. Animal Biotechnology, 27 (4). pp. 310-314.

Li, Yan, Mangott, Arnold, Kent, Megan, and Pirozzi, Igor (2016) Nutrient efficacy of microalgae as aquafeed additives for the adult black tiger prawn, Penaeus monodon. Aquaculture Research, 47 (11). pp. 3625-3635.

Malerba, Martino, Heimann, Kirsten, and Connolly, Sean R. (2016) Nutrient utilization traits vary systematically with intraspecific cell size plasticity. Functional Ecology, 30 (11). pp. 1745-1755.

Cipresso Pereira, Pedro Henrique, Silva Leal, Isabela Carolina, and De Araújo, Maria (2016) Observer presence may alter the behaviour of reef fishes associated with coral colonies. Marine Ecology, 37 (4). pp. 760-769.

Noonan, Sam H.C., and Fabricius, Katharina E. (2016) Ocean acidification affects productivity but not the severity of thermal bleaching in some tropical corals. ICES Journal of Marine Science, 73 (3). pp. 715-726.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Olfactory responses of coral-reef fishes to coral degradation and crown-of-thorns (Acanthaster planci). Marine and Freshwater Research, 67 (5). pp. 605-611.

Hair, Cathy, Mills, David J., McIntyre, Rowan, and Southgate, Paul C. (2016) Optimising methods for community-based sea cucumber ranching: experimental releases of cultured juvenile Holothuria scabra into seagrass meadows in Papua New Guinea. Aquaculture Reports, 3. pp. 198-208.

Andrews, Kimberly R., Williams, Ashley J., Fernandez-Silva, Iria, Newman, Steve J., Copus, Joshua M., Wakefield, Corey B., Randall, John E., and Bowen, Brian W. (2016) Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic. Molecular Phylogenetics and Evolution, 100. pp. 361-371.

Collins, Geoffrey Mark, Clark, Timothy Darren, and Carton, Alexander Guy (2016) Physiological plasticity v. inter-population variability: understanding drivers of hypoxia tolerance in a tropical estuarine fish. Marine and Freshwater Research, 67 (10). pp. 1575-1582.

Munday, Philip L., Donelson, Jennifer M., and Domingos, Jose A. (2016) Potential for adaptation to climate change in a coral reef fish. Global Change Biology, 23 (1). pp. 307-317.

Hall, April, and Kingsford, Michael (2016) Predators exacerbate competitive interactions and dominance hierarchies between two coral reef fishes. PLoS ONE, 11. e0151778. pp. 1-20.

McCormick, Mark I. (2016) Protogyny in a tropical damselfish: females queue for future benefit. PeerJ, 4. e2198. pp. 1-26.

Ram, Ravinesh, Chand, Roveena Vandana, Zeng, Chaoshu, and Southgate, Paul C. (2016) Recovery rates for eight commercial sea cucumber species from the Fiji Islands. Regional Studies in Marine Science, 8. pp. 59-64.

Camps, Mercedes, Benavides, Mar, Lema, Kimberley A., Bourne, David G., Grosso, Olivier, and Bonnet, Sophie (2016) Released coral mucus does not enhance planktonic N2 fixation rates. Aquatic Microbial Ecology, 77 (1). pp. 51-63.

Carl, Christina, Lawton, Rebecca J., Paul, Nicholas A., and de Nys, Rocky (2016) Reproductive output and productivity of filamentous tropical Ulva over time. Journal of Applied Phycology, 28 (1). pp. 429-438.

Ventura, Patricia, Jarrold, Michael D., Merle, Pierre Laurent, Barnay-Verdier, Stéphanie, Zamoum, Thamilla, Rodolfo-Metalpa, Riccardo, Calosi, Piero, and Furla, Paola (2016) Resilience to ocean acidification: decreased carbonic anhydrase activity in sea anemones under high pCO2 conditions. Marine Ecology Progress Series, 559. pp. 257-263.

Newman, Stephen J., Williams, Ashley J., Wakefield, Corey B., Nicol, Simon J., Taylor, Brett M., and O'Malley, Joseph (2016) Review of the life history characteristics, ecology and fisheries for deep-water tropical demersal fish in the Indo-Pacific region. Reviews in Fish Biology and Fisheries, 26 (3). pp. 537-562.

Chivers, Douglas P., McCormick, Mark I., Allan, Bridie J.M., and Ferrari, Maud C.O. (2016) Risk assessment and predator learning in a changing world: understanding the impacts of coral reef degradation. Scientific Reports, 6. 32542. pp. 1-7.

Thépot, Valentin, Mangott, Arnold, and Pirozzi, Igor (2016) Rotifers enriched with a mixed algal diet promote survival, growth and development of barramundi larvae, Lates calcarifer (Bloch). Aquaculture Reports, 3. pp. 147-158.

Herrera, Marcela, Nanninga, Gerrit B., Planes, Serge, Jones, Geoffrey P., Thorrold, Simon R., Saenz-Agudelo, Pablo, Almany, Glenn R., and Berumen, Michael L. (2016) Seascape and life-history traits do not predict self-recruitment in a coral reef fish. Biology Letters, 12 (8). 20160309. pp. 1-4.

Angell, Alex R., Angell, Simon F., de Nys, Rocky, and Paul, Nicholas A. (2016) Seaweed as a protein source for mono-gastric livestock. Trends in Food Science and Technology, 54. pp. 74-84.

Cole, Andrew J., Roberts, David A., Garside, Alan L., de Nys, Rocky, and Paul, Nicholas A. (2016) Seaweed compost for agricultural crop production. Journal of Applied Phycology, 28 (1). pp. 629-642.

Goatley, Christopher H.R., Bonaldo, Roberta M., Fox, Rebecca J., and Bellwood, David R. (2016) Sediments and herbivory as sensitive indicators of coral reef degradation. Ecology and Society, 21 (1). 29. pp. 1-17.

Berry, Kathryn L.E., Hoogenboom, Mia O., Flores, Florita, and Negri, Andrew P. (2016) Simulated coal spill causes mortality and growth inhibition in tropical marine organisms. Scientific Reports, 6. 25894. pp. 1-8.

Bellwood, David R., Goatley, Christopher H.R., Khan, Joanna A., and Tebbett, Sterling B. (2016) Site fidelity and homing in juvenile rabbitfishes (Siganidae). Coral Reefs, 35 (4). pp. 1151-1155.

Buelow, Christina A., Baker, Ronald, Reside, April E., and Sheaves, Marcus (2016) Spatial dynamics of coastal forest bird assemblages: the influence of landscape context, forest type, and structural connectivity. Landscape Ecology, 32 (3). pp. 547-561.

Barnett, Adam, Abrantes, Kátya G., Baker, Ronald, Diedrich, Amy S., Farr, Marina, Kuilboer, Alf, Mahony, Tracey, McLeod, Ian, Moscardo, Gianna, Prideaux, Murray, Stoeckl, Natalie, van Luyn, Ariella, and Sheaves, Marcus (2016) Sportfisheries, conservation and sustainable livelihoods: a multidisciplinary guide to developing best practice. Fish and Fisheries, 17 (3). pp. 696-713.

Malerba, Martino E., Connolly, Sean R., and Heimann, Kirsten (2016) Standard flow cytometry as a rapid and non-destructive proxy for cell nitrogen quota. Journal of Applied Phycology, 28 (2). pp. 1085-1095.

Mooney, Christopher J., and Kingsford, Michael J. (2016) Statolith morphometrics can discriminate among taxa of cubozoan jellyfishes. PLoS ONE, 11. e0155719. pp. 1-16.

Llewellyn, L.E., Bainbridge, S., Page, G., O'Callaghan, M.D., and Kingsford, M.J. (2016) StingerCam: a tool for ecologists and stakeholders to detect the presence of venomous tropical jellyfish. Limnology and Oceanography: Methods, 14 (10). pp. 649-657.

Yong, R.Q-Y., Cutmore, S.C., Bray, R.A., Miller, T.L., Semarariana, I.W.Y., Palm, H.W., and Cribb, T.H. (2016) Three new species of blood flukes (Digenea: Aporocotylidae) infecting pufferfishes (Teleostei: Tetraodontidae) from off Bali, Indonesia. Parasitology International, 65 (5, Part A). pp. 432-443.

Blake, Denise F., and Brown, Lawrence H. (2016) Tissue oxygenation using different oxygen delivery devices and flow rates - Reply. Diving and Hyperbaric Medicine, 46 (1). pp. 58-59.

Rocker, Melissa M., and Brandl, Simon J. (2016) Transplantation of corals into a new environment results in substantial skeletal loss in Acropora tenuis. Marine Biodiversity, 45 (2). pp. 321-326.

Rahman, Syed Ajijur, Roshetko, James M., Sunderland, Terry, Basuki, Imam, and Healey, John R. (2016) Tree culture of smallholder farmers practicing agroforestry in Gunung Salak Valley, West Java, Indonesia. Small-Scale Forestry, 15 (4). pp. 433-442.

Turner, Rachel A., Addison, Jane, Arias, Adrian, Bergseth, Brock J., Marshall, Nadine A., Morrison, Tiffany H., and Tobin, Renae C. (2016) Trust, confidence, and equity affect the legitimacy of natural resource governance. Ecology and Society, 21 (3). 18.

Phillips, Julie A., Lawton, Rebecca J., de Nys, Rocky, Paul, Nicholas A., and Carl, Christina (2016) Ulva sapora sp. nov., an abundant tubular species of Ulva (Ulvales) from the tropical Pacific Ocean. Phycologia, 55 (1). pp. 55-64.

Nayfa, Maria G., and Zenger, Kyall R. (2016) Unravelling the effects of gene flow and selection in highly connected populations of the silver-lip pearl oyster (Pinctada maxima). Marine Genomics, 28. pp. 99-106.

D'Lima, Coralie, Welters, Riccardo, Hamann, Mark, and Marsh, Helene (2016) Using regional geographic scale substitution to value coastal wildlife tourism: implications for stakeholders, conservation and management. Ocean & Coastal Management, 128. pp. 52-60.

Joyce, Melissa K., and Pirozzi, Igor (2016) Using stable isotope analysis to determine the contribution of naturally occurring pond biota and supplementary feed to the diet of farmed Australian freshwater crayfish, redclaw (Cherax quadricarinatus). International Aquatic Research , 8 (3). pp. 1-13.

Hall, A.E., and Kingsford, M.J. (2016) Variation in the population demographics of Scolopsis bilineatus in response to predators. Coral Reefs, 35 (4). pp. 1173-1185.

Roeger, Jessica, Foale, Simon, and Sheaves, Marcus (2016) When 'fishing down the food chain' results in improved food security: evidence from a small pelagic fishery in Solomon Islands. Fisheries Research, 174. pp. 250-259.

McCormick, Mark (2016) When corals die and fishes become fearless. Wildlife Australia, 53 (3). pp. 38-41.

Arrigoni, Roberto, Benzoni, Francesca, Huang, Danwei, Fukami, Hironobu, Chen, Chaolun Allen, Berumen, Michael L., Hoogenboom, Mia, Thompson, Damian, Hoeksema, Bert W., Budd, Ann F., Zayasu, Yuna, Terraneo, Tullia I., Kitano, Yuki F., and Baird, Andrew H. (2016) When forms meet genes: revision of the scleractinian genera Micromussa and Homophyllia (Lobophylliidae) with a description of two new species and one new genus. Contributions to Zoology, 85 (4). pp. 387-422.

Beaumont, Linda, Graham, Erin, Duursma, Daisy Englert, Wilson, Peter D., Cabrelli, Abigail, Baumgartner, John B., Hallgren, Willow, Esperon-Rodriguez, Manuel, Nipperess, David A., Warren, Dan L., Laffan, Shawn W., and VanDerWal, Jeremy (2016) Which species distribution models are more (or less) likely to project broad-scale, climate-induced shifts in species ranges? Ecological Modelling, 342. pp. 135-146.

Baird, Mark E., Adams, Matthew P., Babcock, Russell C., Oubelkheir, Kadija, Mongin, Mathieu, Wild-Allen, Karen A., Skerratt, Jennifer, Robson, Barbara J., Petrou, Katherina, Ralph, Peter J., O’Brien, Katherine R., Carter, Alex B., Jarvis, Jessie C., and Rasheed, Michael A. (2016) A biophysical representation of seagrass growth for application in a complex shallow-water biogeochemical model. Ecological Modelling, 325. pp. 13-27.

Woodland, Walmiria, Motti, Cherie A., Irving, Paul, Van Herwerden, Lynne, and Vamvounis, George (2016) A colorimetric approach towards polycyclic aromatic hydrocarbon sensing. Australian Journal of Chemistry, 69 (11). CH16176. pp. 1292-1295.

Yong, Russell Q.-Y., Cutmore, Scott C., Miller, Terrence L., Wee, Nicholas Q.-X., and Cribb, Thomas H. (2016) A complex of Cardicola Short, 1953 (Digenea: Aporocotylidae) species infecting the milkfish Chanos chanos Forsskål(Gonorynchiformes), with descriptions of two new species. Systematic Parasitology, 93 (9). pp. 831-846.

Malta, Eric-jan, and de Nys, Rocky (2016) The effect of short-term preharvest strategies on the carbon constituents of Ulva ohnoi M. Hiraoka et S. Shimada. Journal of Applied Phycology, 28 (1). pp. 555-565.

Roberts, David A., and de Nys, Rocky (2016) The effects of feedstock pre-treatment and pyrolysis temperature on the production of biochar from the green seaweed Ulva. Journal of Environmental Management, 169. pp. 253-260.

Wassnig, Matthew, and Southgate, Paul C. (2016) The effects of stocking density and ration on survival and growth of winged pearl oyster (Pteria penguin) larvae fed commercially available micro-algae concentrates. Aquaculture Reports, 4. pp. 17-21.

Ma, Ka Yan, Craig, Matthew Thomas, Choat, John Howard, and van Herwerden, Lynne (2016) The historical biogeography of groupers: clade diversification patterns and processes. Molecular Phylogenetics and Evolution, 100. pp. 21-30.

Montanari, Stefano R., Hobbs, Jean-Paul A., Pratchett, Morgan S., and Van Herwerden, Lynne (2016) The importance of ecological and behavioural data in studies of hybridisation among marine fishes. Reviews in Fish Biology and Fisheries, 26 (2). pp. 181-198.

Huveneers, Charlie, Simpfendorfer, Colin A., Kim, Susan, Semmens, Jayson M., Hobday, Alistair J., Pederson, Hugh, Stieglitz, Thomas, Vallee, Richard, Webber, Dale, Heupel, Michelle R., Peddemors, Vic, and Harcourt, Robert G. (2016) The influence of environmental parameters on the performance and detection range of acoustic receivers. Methods in Ecology and Evolution, 7 (7). pp. 825-835.

Mooney, Christopher J., and Kingsford, Michael J. (2016) The influence of salinity on box jellyfish (Chironex fleckeri, Cubozoa) statolith elemental chemistry. Marine Biology, 163 (103). pp. 1-13.

Bottesch, Michael, Gerlach, Gabriele, Halbach, Maurits, Andreas, Bally, Kingsford, Michael J., and Mouritsen, Henrik (2016) A magnetic compass that might help coral reef fish larvae return to their natal reef. Current Biology, 26 (24). R1266-R1267.

Ram, Ravinesh, Chand, Roveena Vandana, and Southgate, Paul Colin (2016) An overview of sea cucumber fishery management in the Fiji Islands. Journal of Fisheries and Aquatic Science, 11 (3). pp. 191-205.

Lal, Monal M., Southgate, Paul C., Jerry, Dean R., Bosserelle, Cyprien, and Zenger, Kyall R. (2016) A parallel population genomic and hydrodynamic approach to fishery management of highly-dispersive marine invertebrates: the case of the Fijian Black-Lip Pearl Oyster Pinctada margaritifera. PLoS One, 11 (8). e0161390. pp. 1-26.

Meekan, M.G., Trevitt, L., Simpfendorfer, C.A., and White, W. (2016) The piggybacking stingray. Coral Reefs, 35 (3). p. 1011.

Gong, Jie, Huang, Chencui, Shu, Ling, Bao, Chenchang, Huang, Huiyang, Ye, Haihui, Zeng, Chaoshu, and Li, Shaojing (2016) The retinoid X receptor from mud crab: new insights into its roles in ovarian development and related signaling pathway. Scientific Reports, 6. 23654. pp. 1-13.

Mohamed, A.R., Cumbo, V., Harii, S., Shinzato, C., Chan, C.X., Ragan, M.A., Bourne, D.G., Willis, B.L., Ball, E.E., Satoh, N., and Miller, D.J. (2016) The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome. Molecular Ecology, 25 (13). pp. 3127-3141.

Neveux, N., Magnusson, M., Mata, L., Whelan, A., de Nys, R., and Paul, N.A. (2016) The treatment of municipal wastewater by the macroalga Oedogonium sp and its potential for the production of biocrude. Algal Research, 13. pp. 284-292.

Carl, Christina, Magnusson, Marie, Paul, Nicholas A., and de Nys, Rocky (2016) The yield and quality of multiple harvests of filamentous Ulva tepida. Journal of Applied Phycology, 28 (5). pp. 2865-2873.

Lewis, Stephen E., Wüst, Raphael A.J., Webster, Jody, M., Collins, John, Wright, Shelley, A., and Jacobsen, Geraldine (2015) Rapid relative sea-level fall along north-eastern Australia between 1200 and 800 cal. yr BP: an appraisal of the oyster evidence. Marine Geology, 370. pp. 20-30.

Delghandi, M., Goddard, S., Jerry, D.R., Dao, H.T., Afzal, H., and Al-Jardani, S.S. (2015) Isolation, characterization, and multiplexing of novel microsatellite markers for the tropical scalloped spiny lobster (Panulirus homarus). Genetics and Molecular Research, 14 (4). 5944. pp. 19066-19070.

Cole, Andrew J., De Nys, Rocky, and Paul, Nicholas A. (2015) Biorecovery of nutrient waste as protein in freshwater macroalgae. Algal Research, 7 (2015). pp. 58-65.

Meyer, Lauren, Carter, Steve, and Capper, Angela (2015) An updated ciguatoxin extraction method and silica cleanup for use with HPLC-MS/MS for the analysis of P-CTX-1, PCTX-2 and P-CTX-3. Toxicon, 108. pp. 249-256.

Malerba, Martino E., Connolly, Sean R., and Heimann, Kirsten (2015) An experimentally validated nitrate–ammonium–phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake. Ecological Modelling, 317. pp. 30-40.

Barros, Breno, Sakai, Yoichi, Pereira, Pedro H.C., Gasset, Eric, Buchet, Vincent, Maamaatuaiahutapu, Moana, Ready, Jonathan S., Oliveira, Yrlan, Giarrizzo, Tommaso, and Vallinoto, Marcelo (2015) Comparative allometric growth of the mimetic ephippid reef fishes Chaetodipterus faber and Platax orbicularis. PLoS ONE, 10 (12). e0143838.

Obulisamy, P. Karthikeyan, Chidambarampadmavathy, Karthigeyan, Nadarajan, Saravanan, Lee, Patrick K.H., and Heimann, Kirsten (2015) Effect of CH₄/O₂ ratio on fatty acid profile and polyhydroxybutyrate content in a heterotrophic-methanotrophic consortium. Chemosphere, 141. pp. 235-242.

Udyawer, Vinay, Read, Mark, Hamann, Mark, Simpfendorfer, Colin A., and Heupel, Michelle R. (2015) Effects of environmental variables on the movement and space use of coastal sea snakes over multiple temporal scales. Journal of Experimental Marine Biology and Ecology, 473. pp. 26-34.

Razaghi, Ali, Huerlimann, Roger, Owens, Leigh, and Heimann, Kirsten (2015) Increased expression and secretion of recombinant hINFγ through amino acid starvation-induced selective pressure on the adjacent HIS4 gene in Pichia pastoris. Acta Facultatis Pharmaceuticae Universitatis Comenianae, 62 (2). pp. 1-8.

Freilich, Mara A., and Connolly, Sean R. (2015) Phylogenetic community structure when competition and environmental filtering determine abundances. Global Ecology and Biogeography , 24 (12). pp. 1390-1400.

Jones, Ben C., and Carton, Alexander G. (2015) Effects of dietary enrichment with alpha-tocopherol acetate and post-harvest filleting on lipid oxidation and flesh quality of tropical farmed barramundi (Lates calcarifer). Aquaculture, 448. pp. 280-287.

Cole, Andrew J., Angell, Alex R., De Nys, Rocky, and Paul, Nicholas A. (2015) Cyclical changes in biomass productivity and amino acid content of freshwater macroalgae following nitrogen manipulation. Algal Research, 12. pp. 477-486.

Donelson, Jennifer M. (2015) Development in a warm future ocean may enhance performance in some species. Journal of Experimental Marine Biology and Ecology, 472. pp. 119-125.

Vermeiren, Peter, Abrantes, Kátya, and Sheaves, Marcus (2015) Generalist and specialist feeding crabs maintain discrete trophic niches within and among estuarine locations. Estuaries and Coasts, 38 (6). pp. 2070-2082.

Thépot, Valentin, and Jerry, Dean R. (2015) The effect of temperature on the embryonic development of barramundi, the Australian strain of Lates calcarifer (Bloch) using current hatchery practices. Aquaculture Reports, 2. pp. 132-138.

Bellwood, David R., Goatley, Christopher H.R., Bellwood, Orpha, Delbarre, Daniel J., and Friedman, Matt (2015) The rise of jaw protrusion in spiny-rayed fishes closes the gap on elusive prey. Current Biology, 25 (20). pp. 2696-2700.

Lutz, Adrian, Raina, Jean-Baptiste, Motti, Cherie A., Miller, David J., and van Oppen, Madeleine J.H. (2015) Host coenzyme Q redox state is an early biomarker of thermal stress in the coral Acropora millepora. PLoS ONE, 10 (10). e0139290. pp. 1-18.

Roberts, David A., Cole, Andrew J., Paul, Nicholas A., and De Nys, Rocky (2015) Algal biochar enhances the re-vegetation of stockpiled mine soils with native grass. Journal of Environmental Management, 161. pp. 173-180.

Udyawer, Vinay, Simpfendorfer, Colin A., and Heupel, Michelle R. (2015) Diel patterns in three-dimensional use of space by sea snakes. Animal Biotelemetry, 3. 29. pp. 1-9.

Kishore, Pranesh, and Southgate, Paul C. (2015) Does the quality of cultured pearls from the black-lip pearl oyster, Pinctada margaritifera, improve after the second graft? Aquaculture, 446. pp. 97-102.

Yu, Kun, Gong, Jie, Huang, Chencui, Huang, Huiyang, Ye, Haihui, Wang, Guizhong, and Zeng, Chaoshu (2015) Characterization of CCTα and evaluating its expression in the mud crab Scylla paramamosain when challenged by low temperatures alone and in combination with high and low salinity. Cell Stress & Chaperones, 20 (5). pp. 853-864.

Rueger, Theresa, Harrison, Hugo B., Jones, Geoffrey P., Mansour, Hicham, and Berumen, Michael L. (2015) Resolving genealogical relationships in the Pyjama cardinalfish, Sphaeramia nematoptera (Apogonidae) with 23 novel microsatellite markers. Conservation Genetics Resources, 7 (3). pp. 623-626.

Nowland, Samantha J., Jerry, Dean R., and Southgate, Paul C. (2015) A non-destructive tissue sampling technique for holothurians to facilitate extraction of DNA for genetic analysis. Invertebrate Biology, 134 (3). pp. 252-259.

Momigliano, Paolo, Harcourt, Robert, Robbins, William D., and Stow, Adam (2015) Connectivity in grey reef sharks (Carcharhinus amblyrhynchos) determined using empirical and simulated genetic data. Scientific Reports, 5. 13229.

Abesamis, Rene A., Jadloc, Claro Renato L., and Russ, Garry R. (2015) Varying annual patterns of reproduction in four species of coral reef fish in a monsoonal environment. Marine Biology, 162 (10). pp. 1993-2006.

Holzmeyer, Laura, Duretto, Marco, Crayn, Darren, Hörandl, Elvira, Heslewood, Margaret, Jayanthan, Janani, and Appelhans, Marc (2015) Phylogeny of Acronychia (Rutaceae) and first insights into its historical biogeography and the evolution of fruit characters. PLoS ONE, 10 (8). e0136296. pp. 1-22.

Kishore, Pranesh, and Southgate, Paul C. (2015) Development and function of pearl-sacs grown from regenerated mantle graft tissue in the black-lip pearl oyster, Pinctada margaritifera (Linnaeus, 1758). Fish and Shellfish Immunology, 45 (2). pp. 567-573.

Militz, Thane A., Kinch, Jeff, and Southgate, Paul C. (2015) Population demographics of Tridacna noae (Röding, 1798) in New Ireland, Papua New Guinea. Journal of Shellfish Research, 34 (2). pp. 329-335.

Gosch, Björn J., Paul, Nicholas A., De Nys, Rocky, and Magnusson, Marie (2015) Spatial, seasonal, and within-plant variation in total fatty acid content and composition in the brown seaweeds Dictyota bartayresii and Dictyopteris australis (Dictyotales, Phaeophyceae). Journal of Applied Phycology, 27 (4). pp. 1607-1622.

Alajmi, Fahad, Zeng, Chaoshu, and Jerry, Dean R. (2015) Domestication as a novel approach for improving the cultivation of calanoid copepods: a case study with Parvocalanus crassirostris. PLoS ONE, 10 (7). e0133269. pp. 1-16.

Tsuji, Haruo, Zeng, Chaoshu, Romano, Nicholas, Southgate, Paul, and Ye, Haihui (2015) Development of larval culture methods for blue-legged gold coral banded shrimp Stenopus cyanoscelis: effects of prey type and prey density. Fisheries Science, 81 (4). pp. 731-736.

Roberts, David A., Paul, Nicholas A., Cole, Andrew J., and De Nys, Rocky (2015) From waste water treatment to land management: conversion of aquatic biomass to biochar for soil amelioration and the fortification of crops with essential trace elements. Journal of Environmental Management, 157. pp. 60-68.

Huerlimann, Roger, Zenger, Kyall R., Jerry, Dean R., and Heimann, Kirsten (2015) Phylogenetic analysis of nucleus-encoded acetyl-CoA carboxylases targeted at the cytosol and plastid of algae. PLoS ONE, 10 (7). e0131099. pp. 1-10.

Houk, Peter, Camacho, Rodney, Johnson, Steven, McLean, Matthew, Maxin, Selino, Anson, Jorg, Joseph, Eugene, Nedlic, Osamu, Luckymis, Marston, Adams, Katrina, Hess, Don, Kabua, Emma, Yalon, Anthony, Buthung, Eva, Graham, Curtis, Leberer, Trina, Taylor, Brett, and van Woesik, Robert (2015) The Micronesia challenge: assessing the relative contribution of stressors on coral reefs to facilitate science-to-management feedback. PLoS ONE, 10 (6). e0130823. pp. 1-17.

Nguyen Hao, Hoang-Tuong, Karthikeyan, Obulisamy Parthiba, and Heimann, Kirsten (2015) Bio-refining of carbohydrate-rich food waste for biofuels. Energies, 8 (7). pp. 6350-6364.

Carter, Alex B., Carton, Alexander G., McCormick, Mark I., Tobin, Andrew J., and Williams, Ashley J. (2015) Maternal size, not age, influences egg quality of a wild, protogynous coral reef fish Plectropomus leopardus. Marine Ecology Progress Series, 529. pp. 249-263.

Loffler, Zoe, Bellwood, David R., and Hoey, Andrew S. (2015) Among-habitat algal selectivity by browsing herbivores on an inshore coral reef. Coral Reefs, 34 (2). pp. 597-605.

Basiita, Rose K., Zenger, Kyall R., Mwanja, Matthew T., and Jerry, Dean R. (2015) Development of genome-wide microsatellite genetic resources in a commercially important African freshwater fish species – the Nile perch, Lates niloticus. Animal Genetics, 46 (3). p. 340.

Abrantes, Kátya G., Barnett, Adam, Baker, Ronald, and Sheaves, Marcus (2015) Habitat-specific food webs and trophic interactions supporting coastal-dependent fishery species: an Australian case study. Reviews in Fish Biology and Fisheries, 25 (2). pp. 337-363.

Pratchett, M.S., Blowes, S.A., Coker, D., Kubacki, E., Nowicki, J., and Hoey, A.S. (2015) Indirect benefits of high coral cover for non-corallivorous butterflyfishes. Coral Reefs, 34 (2). pp. 665-672.

Dutra, Leo X.C., Bustamante, Rodrigo H., Sporne, Ilva, van Putten, Ingrid, Dichmont, Catherine M., Ligtermoet, Emma, Sheaves, Marcus, and Deng, Roy A. (2015) Organizational drivers that strengthen adaptive capacity in the coastal zone of Australia. Ocean & Coastal Management, 109. pp. 64-76.

Pollock, F. Joseph, Krediet, Cory J., Garren, Melissa, Stocker, Roman, Winn, Karina, Wilson, Bryan, Huete-Stauffer, Carla, Willis, Bette L., and Bourne, David G. (2015) Visualization of coral host-pathogen interactions using a stable GFP-labeled Vibrio coralliilyticus strain. Coral Reefs, 34 (2). pp. 655-662.

Kerry, J.T., and Bellwood, D.R. (2015) The functional role of tabular structures for large reef fishes: avoiding predators or solar irradiance? Coral Reefs, 34 (2). pp. 693-702.

Payne, Nicholas L., Snelling, Edward P., Fitzpatrick, Richard, Seymour, Jamie, Courtney, Robert, Barnett, Adam, Watanabe, Yuuki, Sims, David W., Squire, Lyle, and Semmens, Jayson M. (2015) A new method for resolving uncertainty of energy requirements in large water breathers: the 'mega-flume' seagoing swim-tunnel respirometer. Methods in Ecology and Evolution, 6 (6). pp. 668-677.

Budd, Alyssa M., Banh, Quyen Q., Domingos, Jose A., and Jerry, Dean R. (2015) Sex control in fish: approaches, challenges and opportunities for aquaculture. Journal of Marine Science and Engineering, 3 (2). jmse3020329. pp. 329-355.

Courtney, Robert, Sachlikidis, Nik, Jones, Rhondda, and Seymour, Jamie (2015) Prey capture ecology of the Cubozoan Carukia barnesi. PLoS ONE, 10 (5). e0124256. pp. 1-12.

Priyambodo, Bayu, Jones, Clive, and Sammut, Jesmond (2015) The effect of trap type and water depth on puerulus settlement in the spiny lobster aquaculture industry in Indonesia. Aquaculture, 442. pp. 132-137.

Gosch, Björn J., Lawton, Rebecca J., Paul, Nicholas A., de Nys, Rocky, and Magnusson, Marie (2015) Environmental effects on growth and fatty acids in three isolates of Derbesia tenuissima (Bryopsidales, Chlorophyta). Algal Research, 9. pp. 82-93.

Taylor, Brett M., Lindfield, Steven J., and Choat, J. Howard (2015) Hierarchical and scale-dependent effects of fishing pressure and environment on the structure and size distribution of parrotfish communities. Ecography, 38. pp. 520-530.

Ow, Y.X., Collier, C.J., and Uthicke, S. (2015) Responses of three tropical seagrass species to CO2 enrichment. Marine Biology, 162 (5). pp. 1005-1017.

Lédée, Elodie J.I., Heupel, Michelle, Tobin, Andrew J., Knip, Danielle M., and Simpfendorfer, Colin A. (2015) A comparison between traditional kernel-based methods and network analysis: an example from two nearshore shark species. Animal Behaviour, 103. pp. 17-28.

Kumar, Senthil Arun, Magnusson, Marie, Ward, Leigh C., Paul, Nicholas A., and Brown, Lindsay (2015) A green algae mixture of Scenedesmus and Schroederiella attenuates obesity-linked metabolic syndrome in rats. Nutrients, 7 (4). pp. 2771-2787.

Chotnipat, Soranot, Miller, Terrence L., Knuckey, Richard M., and Hutson, Kate S. (2015) Molecular and morphological evidence for the widespread distribution of Laticola paralatesi infecting wild and farmed Lates calcarifer in Australia. Diseases of Aquatic Organisms, 113 (3). pp. 195-205.

Lédée, Elodie J.I., Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2015) Movements and space use of giant trevally in coral reef habitats and the importance of environmental drivers. Animal Biotelemetry, 3. 6. pp. 1-14.

Gamble, Steven, Pirozzi, Igor, Hall, Michael R., Zeng, Chaoshu, Conlan, Jessica A., and Francis, David S. (2015) The effects of pre-digested protein sources on the performance of early–mid stage Panulirus ornatus phyllosoma. Aquaculture, 440. pp. 17-24.

Roberts, David A., Paul, Nicholas A., Bird, Michael I., and de Nys, Rocky (2015) Bioremediation for coal-fired power stations using macroalgae. Journal of Environmental Management, 153. pp. 25-32.

Hodge, Jennifer, and Bellwood, David R. (2015) On the relationship between species age and geographical range in reef fishes: are widespread species older than they seem? Global Ecology and Biogeography , 24 (4). pp. 495-505.

Boaden, A.E., and Kingsford, M.J. (2015) Predators drive community structure in coral reef fish assemblages. Ecosphere, 6 (4). 46. pp. 1-33.

Miller, G.M., Kroon, F.J., Metcalfe, S., and Munday, P.L. (2015) Temperature is the evil twin: effects of increased temperature and ocean acidification on reproduction in a reef fish. Ecological Applications, 25 (3). pp. 603-620.

Adlard, Robert D., Miller, Terrence L., and Smit, Nico J. (2015) The butterfly effect: parasite diversity, environment, and emerging disease in aquatic wildlife. Trends in Parasitology, 31 (4). pp. 160-166.

Allan, Bridie J.M., Domenici, Paolo, Munday, Philip L., and McCormick, Mark I. (2015) Feeling the heat: the effect of acute temperature changes on predator–prey interactions in coral reef fish. Conservation Physiology, 3 (1). cov011. pp. 1-8.

Johansson, Charlotte L., Paul, Nicholas A., de Nys, Rocky, and Roberts, David A. (2015) The complexity of biosorption treatments for oxyanions in a multi-element mine effluent. Journal of Environmental Management, 151. pp. 386-392.

Gong, Jie, Ye, Haihui, Xie, Yinjie, Yang, Yanan, Huang, Huiyang, Li, Shaojing, and Zeng, Chaoshu (2015) Ecdysone receptor in the mud crab Scylla paramamosain: a possible role in promoting ovarian development. Journal of Endocrinology, 224 (3). JOE-14-0526. pp. 273-287.

Kerry, J.T., and Bellwood, D.R. (2015) Do tabular corals constitute keystone structures for fishes on coral reefs? Coral Reefs, 34 (1). pp. 41-50.

Cirés, Samuel, Alvarez-Roa, Carlos, and Heimann, Kirsten (2015) First use of the WAVE™ disposable rocking bioreactor for enhanced bioproduct synthesis by N2-fixing cyanobacteria. Biotechnology and Bioengineering, 112 (3). pp. 621-626.

Lawton, Rebecca J., Carl, Christina, de Nys, Rocky, and Paul, Nicholas A. (2015) Heritable variation in growth and biomass productivity in the clonal freshwater macroalga Oedogonium. Algal Research, 8. pp. 108-114.

Rizzari, Justin R., Bergseth, Brock J., and Frisch, Ashley J. (2015) Impact of conservation areas on trophic interactions between apex predators and herbivores on coral reefs. Conservation Biology, 29 (2). pp. 418-429.

Magnusson, Marie, Mata, Leonardo, Wang, Na, Zhao, Jian, de Nys, Rocky, and Paul, Nicholas A. (2015) Manipulating antioxidant content in macroalgae in intensive land-based cultivation systems for functional food applications. Algal Research, 8. pp. 153-160.

Cipresso Pereira, Pedro Henrique, Barros, Breno, Zemoi, Rahel, and Ferreira, Beatrice Padovani (2015) Ontogenetic diet changes and food partitioning of Haemulon spp. coral reef fishes, with a review of the genus diet. Reviews in Fish Biology and Fisheries, 25 (1). pp. 245-260.

Bradley, Michael, Van Putten, Ingrid, and Sheaves, Marcus (2015) The pace and progress of adaptation: marine climate change preparedness in Australia's coastal communities. Marine Policy, 53. pp. 13-20.

Kent, Megan, Welladsen, Heather M., Mangott, Arnold, and Li, Yan (2015) Nutritional evaluation of Australian microalgae as potential human health supplements. PLoS ONE, 10 (2). e0118985. pp. 1-14.

Militz, Thane A., and Hutson, Kate S. (2015) Beyond symbiosis: cleaner shrimp clean up in culture. PLoS ONE, 10 (2). e0117723. pp. 1-11.

Matley, J.K., Heupel, M.R., and Simpfendorfer, C.A. (2015) Depth and space use of leopard coralgrouper Plectropomus leopardus using passive acoustic tracking. Marine Ecology Progress Series, 521. pp. 201-216.

Whalan, Steve, Abdul Wahab, Muhammad A., Sprungala, Susanne, Poole, Andrew J., and de Nys, Rocky (2015) Larval settlement: the role of surface topography for sessile coral reef invertebrates. PLoS ONE, 10 (2). e0117675. pp. 1-17.

Brazenor, Alexander K., and Hutson, Kate S. (2015) Effects of temperature and salinity on the life cycle of Neobenedenia sp. (Monogenea: Capsalidae) infecting farmed barramundi (Lates calcarifer ). Parasitology Research, 114 (5). pp. 1875-1886.

Kumar, Senthil Arun, Magnusson, Marie, Ward, Leigh C., Paul, Nicholas A., and Brown, Lindsay (2015) Seaweed supplements normalise metabolic, cardiovascular and liver responses in high-carbohydrate, high-fat fed rats. Marine Drugs, 13 (2). pp. 788-805.

Roberts, David A., Paul, Nicholas A., Dworjanyn, Symon A., Hu, Yi, Bird, Michael I., and de Nys, Rocky (2015) Gracilaria waste biomass (sampah rumput laut) as a bioresource for selenium biosorption. Journal of Applied Phycology, 27 (1). pp. 611-620.

Januchowski-Hartley, Fraser A., Graham, Nicholas A.J., Cinner, Joshua E., and Russ, Garry R. (2015) Local fishing influences coral reef fish behavior inside protected areas of the Indo-Pacific. Biological Conservation, 182. pp. 8-12.

Hall, N.M., Berry, K.L.E., Rintoul, L., and Hoogenboom, M.O. (2015) Microplastic ingestion by scleractinian corals. Marine Biology, 162 (3). pp. 725-732.

Espinoza, Mario, Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2015) Residency patterns and movements of grey reef sharks (Carcharhinus amblyrhynchos) in semi-isolated coral reef habitats. Marine Biology, 162 (2). pp. 343-358.

Gosch, Björn J., Paul, Nicholas A., de Nys, Rocky, and Magnusson, Marie (2015) Seasonal and within-plant variation in fatty acid content and composition in the brown seaweed Spatoglossum macrodontum (Dictyotales, Phaeophyceae). Journal of Applied Phycology, 27 (1). pp. 387-398.

Akhila, Dharnappa Sannejal, Mani, Madhu K., Rai, Praveen, Condon, Kelly, Owens, Leigh, and Karunasagar, Indrani (2015) Antisense RNA mediated protection from white spot syndrome virus (WSSV) infection in Pacific white shrimp Litopenaeus vannamei. Aquaculture, 435. pp. 306-309.

Gainsford, A., Van Herwerden, L., and Jones, G.P. (2015) Hierarchical behaviour, habitat use and species size differences shape evolutionary outcomes of hybridization in a coral reef fish. Journal of Evolutionary Biology, 28 (1). pp. 205-222.

Abrantes, Kátya G., Johnston, Ross, Connolly, Rod M., and Sheaves, Marcus (2015) Importance of mangrove carbon for aquatic food webs in wet–dry tropical estuaries. Estuaries and Coasts, 38 (1). pp. 383-399.

Buelow, Christina, and Sheaves, Marcus (2015) A birds-eye view of biological connectivity in mangrove systems. Estuarine, Coastal and Shelf Science, 152. pp. 33-43.

Atherton, Jennifer Ann, and McCormick, Mark Ian (2015) Active in the sac: damselfish embryos use innate recognition of odours to learn predation risk before hatching. Animal Behaviour, 103. pp. 1-6.

Carton, Guy, Pirozzi, Igor, Jones, Ben, and Smullen, Richard (2015) Adding flavour complexity to farmed barramundi. Global Aquaculture Advocate , 18 (5). pp. 80-81.

Smart, J.J., Chin, A., Tobin, A.J., Simpfendorfer, C.A., and White, W.T. (2015) Age and growth of the common blacktip shark Carcharhinus limbatusfrom Indonesia, incorporating an improved approach to comparing regional population growth rates. African Journal of Marine Science, 37 (2). pp. 177-188.

Drew, M., White, W.T., Dharmadi, Harry, A.V., and Huveneers, C. (2015) Age, growth and maturity of the pelagic thresher Alopias pelagicusand the scalloped hammerhead Sphyrna lewini. Journal of Fish Biology, 86 (1). pp. 333-354.

Masese, Frank O., Abrantes, Kátya G., Gettel, Gretchen M., Bouillon, Steven, Irvine, Kenneth, and McClain, Michael E. (2015) Are large herbivores vectors of terrestrial subsidies for riverine food webs? Ecosystems, 18 (4). pp. 686-706.

Hein, Margaux Y., Lamb, Joleah B., Scott, Chad, and Willis, Bette L. (2015) Assessing baseline levels of coral health in a newly established marine protected area in a global scuba diving hotspot. Marine Environmental Research, 103. pp. 56-65.

Currey, Leanne M., Heupel, Michelle R., Simpfendorfer, Colin A., and Williams, Ashley J. (2015) Assessing environmental correlates of fish movement on a coral reef. Coral Reefs, 34 (4). pp. 1267-1277.

Loffler, Z., Bellwood, D.R., and Hoey, A.S. (2015) Associations among coral reef macroalgae influence feeding by herbivorous fishes. Coral Reefs, 34 (1). pp. 51-55.

Poulos, Davina E., and McCormick, Mark I. (2015) Asymmetries in body condition and order of arrival influence competitive ability and survival in a coral reef fish. Oecologia, 179 (3). pp. 719-728.

Karthikeyan, Obulisamy P., Rajasekar, Aruliah, and Balasubramanian, Rajasekhar (2015) Bio-oxidation and bio-cyanidation of refractory mineral ores for gold extraction: a review. Critical Reviews in Environmental Science and Technology, 45. pp. 1611-1643.

Roberts, David A., Paul, Nicholas A., Dworjanyn, Symon A., Bird, Michael I., and de Nys, Rocky (2015) Biochar from commercially cultivated seaweed for soil amelioration. Scientific Reports, 5. 9665. pp. 1-6.

Chidambarampadmavathy, Karthigeyan, Obulisamy, Kartik P., and Heimann, Kirsten (2015) Biopolymers made from methane in bioreactors. Engineering in Life Sciences, 15 (7). pp. 689-699.

Chin, Andrew, Mourier, Johann, and Rummer, Jodie L. (2015) Blacktip reef sharks (Carcharhinus melanopterus) show high capacity for wound healing and recovery following injury. Conservation Physiology, 3 (1). cov062. pp. 1-9.

Coker, D.J., Nowicki, J.P., and Pratchett, M.S. (2015) Body condition of the coral-dwelling fish Dascyllus aruanus (Linnaeus 1758) following host colony bleaching. Environmental Biology of Fishes, 98 (2). pp. 691-695.

Welsh, J.Q., Bonaldo, R.M., and Bellwood, D.R. (2015) Clustered parrotfish feeding scars trigger partial coral mortality of massive Porites colonies on the inshore Great Barrier Reef. Coral Reefs, 34 (1). pp. 81-86.

Zhu, Youjian, Piotrowska, Patrycja, Van Eyk, Philip J., Bostrom, Dan, Kwong, Chi Wai, Wang, Dingbiao, Cole, Andrew, de Nys, Rocky, Gentili, Francesco G., and Ashman, Peter J. (2015) Cogasification of Australian brown coal with algae in a fluidized bed reactor. Energy & Fuels, 29 (3). pp. 1686-1700.

Islam , Muhammad Aminul, Rahman, M.M., Heimann, Kirsten, Nabi, Md Nurun, Ristovski, Zoran, Dowell, Ashley, Feng, Bo, von Alvensleben, Nicolas, and Brown, Richard J. (2015) Combustion analysis of microalgae methyl ester in a common rail direct injection diesel engine. Fuel , 143. pp. 351-360.

Yuen, Alexander, de Nys, Rocky, Masters, Anthony F., Maschmeyer, Thomas, and Haynes, Brian S. (2015) Comment on Trondheim paper. Algal Research, 9. p. 322.

van de Water, Jeroen A.J.M., Lamb, Joleah B., van Oppen, Madeleine J.H., Willis, Bette L., and Bourne, David G. (2015) Comparative immune responses of corals to stressors associated with offshore reef-based tourist platforms. Conservation Physiology, 3 (1). cov032.

Neveux, Nicolas, Magnusson, Marie, Maschmeyer, Thomas, de Nys, Rocky, and Paul, Nicholas A. (2015) Comparing the potential production and value of high-energy liquid fuels and protein from marine and freshwater macroalgae. GCB Bioenergy, 7 (4). pp. 673-689.

Cipresso Pereira, Pedro H., Munday, Philip L., and Jones, Geoffrey P. (2015) Competitive mechanisms change with ontogeny in coral-dwelling gobies. Ecology, 96 (11). pp. 3090-3101.

Heupel, Michelle R., Simpfendorfer, Colin A., Espinoza, Mario, Smoothey, Amy F., Tobin, Andrew, and Peddemors, Victor (2015) Conservation challenges of sharks with continental scale migrations. Frontiers in Marine Science, 2 (12). pp. 1-7.

Randall, C.J., and van Woesik, R. (2015) Contemporary white-band disease in Caribbean corals driven by climate change. Nature Climate Change, 5. pp. 375-379.

Espinoza, Mario, Lédée, Elodie J.I., Simpfendorfer, Colin A., Tobin, Andrew J., and Heupel, Michelle R. (2015) Contrasting movements and connectivity of reef-associated sharks using acoustic telemetry: implications for management. Ecological Applications, 25 (8). pp. 2101-2118.

Casey, J.M., Choat, J.H., and Connolly, S.R. (2015) Coupled dynamics of territorial damselfishes and juvenile corals on the reef crest. Coral Reefs, 34. pp. 1-11.

Lönnstedt, Oona M., and McCormick, Mark I. (2015) Damsel in distress: captured damselfish prey emit chemical cues that attract secondary predators and improve escape chances. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1818). p. 52038.

Russ, Garry R., Bergseth, Brock J., Rizzari, Justin R., and Alcala, Angel C. (2015) Decadal-scale effects of benthic habitat and marine reserve protection on Philippine goatfish (F: Mullidae). Coral Reefs, 34 (3). pp. 773-787.

McKenna, Skye, Jarvis, Jessie, Sankey, Tonia, Reason, Carissa, Coles, Robert, and Rasheed, Michael (2015) Declines of seagrasses in a tropical harbour, North Queensland, Australia, are not the result of a single event. Journal of Biosciences, 40 (2). pp. 389-398.

Jankowski, M.W., Gardiner, N.R., and Jones, G.P. (2015) Depth and reef profile: effects on the distribution and abundance of coral reef fishes. Environmental Biology of Fishes, 98 (5). pp. 1373-1386.

Ngo, Diu Thi, Pirozzi, Igor, and Glencross, Brett (2015) Digestibility of canola meals in barramundi (Asian seabass; Lates calcarifer). Aquaculture, 435. pp. 442-449.

Lefèvre, C.D., and Bellwood, D.R. (2015) Disturbance and recolonisation by small reef fishes: the role of local movement versus recruitment. Marine Ecology Progress Series, 537. pp. 205-215.

Mat Noordin, Noordiyana, Zeng, Chaoshu, Southgate, Paul C., and Romano, Nicholas (2015) Effects of dietary fish oil to soybean oil ratio on survival, development, and growth of early juveniles of the blue swimmer crab Portunus pelagicus. Journal of Shellfish Research, 34 (3). pp. 1065-1072.

van De Water, Jeroen A.J.M., Leggat, William, Bourne, David G., Van Oppen, Madeleine J.H., Willis, Bette L., and Ainsworth, Tracy D. (2015) Elevated seawater temperatures have a limited impact on the coral immune response following physical damage. Hydrobiologia, 759 (1). pp. 201-214.

Gong, Jie, Yu, Kun, Shu, Ling, Ye, Haihui, Li, Shaojing, and Zeng, Chaoshu (2015) Evaluating the effects of temperature, salinity, starvation and autotomy on molting success, molting interval and expression of ecdysone receptor in early juvenile mud crabs, Scylla paramamosain. Journal of Experimental Marine Biology and Ecology, 464. pp. 11-17.

Alajmi, Fahad, and Zeng, Chaoshu (2015) Evaluation of microalgal diets for the intensive cultivation of the tropical calanoid copepod, Parvocalanus crassirostris. Aquaculture Research, 46. pp. 1025-1038.

McAllister, Jaime D., Barnett, Adam, Lyle, Jeremy M., and Semmens, Jayson M. (2015) Examining the functional role of current area closures used for the conservation of an overexploited and highly mobile fishery species. ICES Journal of Marine Science, 72 (8). pp. 2234-2244.

Brandl, Simon J., Robbins, William D., and Bellwood, David R. (2015) Exploring the nature of ecological specialization in a coral reef fish community: morphology, diet and foraging microhabitat use. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1815). 20151147. pp. 1-10.

Rocker, Melissa M., Noonan, Sam, Humphrey, Craig, Moya, Aurelie, Willis, Bette L., and Bay, Line K. (2015) Expression of calcification and metabolism-related genes in response to elevated pCO(2) and temperature in the reef-building coral Acropora millepora. Marine Genomics, 24 (Part 3). pp. 313-318.

Kishore, Pranesh, Southgate, Paul, Seeto, Johnson, and Hunter, Justin (2015) Factors influencing the quality of half-pearls (mabe) produced by the winged pearl oyster, Pteria penguin (Röding, 1758). Aquaculture Research, 46 (4). pp. 769-776.

Velu, Chinnathambi, Cirés, Samuel, Alvarez-Roa, Carlos, and Heimann, Kirsten (2015) First outdoor cultivation of the N2-fixing cyanobacterium Tolypothrix sp. in low-cost suspension and biofilm systems in tropical Australia. Journal of Applied Phycology, 27 (5). pp. 1743-1753.

Baker, Ronald, Sheaves, Marcus, and Johnston, Ross (2015) Geographic variation in mangrove flooding and accessibility for fishes and nektonic crustaceans. Hydrobiologia, 762 (1). pp. 1-14.

Kishore, Pranesh, and Southgate, Paul C. (2015) Haemocyte persistence after grafting for pearl production in Pinctada margaritifera (Linnaeus, 1758). Fish and Shellfish Immunology, 42 (2). pp. 530-532.

Trujillo-González, A., Johnson, L.K., Constantinoiu, C.C., and Hutson, K.S. (2015) Histopathology associated with haptor attachment of the ectoparasitic monogenean Neobenedenia sp. (Capsalidae) to barramundi, Lates calcarifer (Bloch). Journal of Fish Diseases, 38 (12). pp. 1063-1067.

Nash, Kirsty L., Welsh, Justin Q., Graham, Nicholas A.J., and Bellwood, David R. (2015) Home-range allometry in coral reef fishes: comparison to other vertebrates, methodological issues and management implications. Oecologia, 177 (1). pp. 73-83.

Fabricius, K, Kluibenschedl, A., Harrington, L., Noonan, S., and De'ath, G. (2015) In situ changes of tropical crustose coralline algae along carbon dioxide gradients. Scientific Reports, 5. 9537.

Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2015) Indirect and direct effects of salinity on the quantity and quality of total amino acids in Ulva ohnoi (Chlorophyta). Journal of Phycology, 51 (3). pp. 536-545.

White, James R., Meekan, Mark G., and McCormick, Mark I. (2015) Individual consistency in the behaviors of newly-settled reef fish. PeerJ, 3. e931. pp. 1-17.

Nguyen Dinh Quang, Duy, Pirozzi, Igor, and Southgate, Paul C. (2015) Ingestion and digestion of live microalgae and microalgae concentrates by sandfish, Holothuria scabra, larvae. Aquaculture, 44. 8486. pp. 256-261.

Dudgeon, Christine L., Pollock, Kenneth H., Braccini, J. Matias, Semmens, Jayson M., and Barnett, Adam (2015) Integrating acoustic telemetry into mark-recapture models to improve the precision of apparent survival and abundance estimates. Oecologia, 178 (3). pp. 761-772.

Welch, David J., Newman, Stephen J., Buckworth, Rik C., Ovenden, Jennifer R., Broderick, Damien, Lester, Robert J.G., Gribble, Neil A., Ballagh, Aaron C., Charters, Robbie A., Stapley, Jason, Street, Raewyn, Garrett, Rod N., and Begg, Gavin A. (2015) Integrating different approaches in the definition of biological stocks: a northern Australian multi-jurisdictional fisheries example using grey mackerel, Scomberomorus semifasciatus. Marine Policy, 55. pp. 73-80.

Ferrari, Maud C.O., Munday, Philip L., Rummer, Jodie L., McCormick, Mark I., Corkill, Katherine, Watson, Sue-Ann, Allan, Bridie J.M., Meekan, Mark G., and Chivers, Douglas P. (2015) Interactive effects of ocean acidification and rising sea temperatures alter predation rate and predator selectivity in reef fish communities. Global Change Biology, 21. pp. 1848-1855.

Johansen, J.L., Pratchett, M.S., Messmer, V., Coker, D.J., Tobin, A.J., and Hoey, A.S. (2015) Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean. Scientific Reports, 5. 13830. pp. 1-8.

McLeod, I.M., McCormick, M.I., Munday, P.L., Clark, T.D., Wenger, A.S., Brooker, R.M., Takahashi, M., and Jones, G.P. (2015) Latitudinal variation in larval development of coral reef fishes: implications of a warming ocean. Marine Ecology Progress Series, 521. pp. 129-141.

Heupel, M.R., and Simpfendorfer, C.A. (2015) Long-term movement patterns of a coral reef predator. Coral Reefs, 34 (2). pp. 679-691.

Russ, Garry R., Miller, Kelsey I., Rizzari, Justin R., and Alcala, Angel C. (2015) Long-term no-take marine reserve and benthic habitat effects on coral reef fishes. Marine Ecology - Progress Series, 529. pp. 233-248.

Bergseth, Brock J., Russ, Garry R., and Cinner, Joshua E. (2015) Measuring and monitoring compliance in no-take marine reserves. Fish and Fisheries, 16 (2). pp. 240-258.

Berner, Florian, Heimann, Kirsten, and Sheehan, Madoc (2015) Microalgal biofilms for biomass production. Journal of Applied Phycology, 27 (5). pp. 1793-1804.

Lane, Daniel J., van Eyk, Philip J., de Nys, Rocky, Roberts, David A., Cole, Andrew J., and Ashman, Peter J. (2015) Mobilisation of trace elements during thermal conversion of algae cultivated in ash dam water. Biomass & Bioenergy, 83. pp. 183-195.

Vermeiren, Peter, and Sheaves, Marcus (2015) Modeling intertidal crab distribution patterns using photographic mapping among tropical Australian estuaries. Estuaries and Coasts, 38 (5). pp. 1545-1556.

Veilleux, Heather D., Ryu, Taewoo, Donelson, Jennifer M., Van Herwerden, Lynne, Seridi, Loqmane, Ghosheh, Yanal, Berumen, Michael L., Leggat, William, Ravasi, Timothy, and Munday, Philip L. (2015) Molecular processes of transgenerational acclimation to a warming ocean. Nature Climate Change, 5. pp. 1074-1078.

Davy, Lauren E., Simpfendorfer, Colin A., and Heupel, Michelle R. (2015) Movement patterns and habitat use of juvenile mangrove whiprays (Himantura granulata). Marine and Freshwater Research, 66 (6). pp. 481-492.

Espinoza, Mario, Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2015) Movement patterns of silvertip sharks (Carcharhinus albimarginatus) on coral reefs. Coral Reefs, 34 (3). pp. 807-821.

Richman, Nadia I., Böhm, Monika, Adams, Susan B., Alvarez, Fernando, Bergey, Elizabeth A., Bunn, John J.S., Burnham, Quinton, Cordeiro, Jay, Coughran, Jason, Crandall, Keith A., Dawkins, Kathryn L., DiStefano, Robert J., Doran, Niall E., Edsman, Lennart, Eversole, Arnold G., Füreder, Leopold, Furse, James M., Gherardi, Francesca, Hamr, Premek, Holdich, David M., Horwitz, Pierre, Johnston, Kerrylyn, Jones, Clive M., Jones, Julia P.G., Jones, Robert L., Jones, Thomas G., Kawai, Tadashi, Lawler, Susan, López-Mejía, Marilu, Miller, Rebecca M., Pedraza-Lara, Carlos, Reynolds, Julian D., Richardson, Alastair M.M., Schultz, Mark B., Schuster, Guenter A., Sibley, Peter J., Souty-Grosset, Catherine, Taylor, Christopher A., Thoma, Roger F., Walls, Jerry, Walsh, Todd S., and Collen, Ben (2015) Multiple drivers of decline in the global status of freshwater crayfish (Decapoda: Astacidea). Philosophical Transactions of the Royal Society of London Series B-Biological SciencesPhilosophical Transactions of the Royal Society of London Series, 370. 20140060. pp. 1-11.

Munroe, Samantha E.M., Simpfendorfer, Colin A., Moloney, James, and Heupel, Michelle R. (2015) Nearshore movement ecology of a medium-bodied shark, the creek whaler Carcharhinus fitzroyensis. Animal Biotelemetry, 3 (10). pp. 1-12.

Morse, Peter, Zenger, Kyall R., McCormick, Mark I., Meekan, Mark G., and Huffard, Christine L. (2015) Nocturnal mating behaviour and dynamic male investment of copulatory time in the Southern Blue-Ringed Octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Behaviour, 152. pp. 1883-1910.

Dao, Hoc Tan, Smith-Keune, Carolyn, Wolanski, Eric, Jones, Clive M., and Jerry, Dean R. (2015) Oceanographic currents and local ecological knowledge indicate, and genetics does not refute, a contemporary pattern of larval dispersal for the ornate spiny lobster, Panulirus ornatus in the south-east Asian archipelago. PLoS ONE, 10 (5). e0124568. pp. 1-19.

Leahy, Susannah M., Russ, Garry R., and Abesamis, Rene A. (2015) Pelagic larval duration and settlement size of a reef fish are spatially consistent, but post-settlement growth varies at the reef scale. Coral Reefs, 34 (4). pp. 1283-1296.

van der Meer, M.H., Berumen, M.L., Hobbs, J.-P.A., and van Herwerden, L. (2015) Population connectivity and the effectiveness of marine protected areas to protect vulnerable, exploited and endemic coral reef fishes at an endemic hotspot. Coral Reefs, 34 (2). pp. 393-402.

Vikesa, V, Nankervis, L., Remo, S.C., Waagbo, R., and Hevroy, E.M. (2015) Pre and postprandial regulation of ghrelin, amino acids and IGF1 in Atlantic salmon (Salmo salar L.) at optimal and elevated seawater temperatures. Aquaculture, 438. pp. 159-169.

Templeman, Michelle A., and Kingsford, Michael J. (2015) Predicting aqueous copper and zinc accumulation in the upside-down jellyfish Cassiopea maremetens through the use of biokinetic models. Environmental Monitoring and Assessment, 187 (416). pp. 1-8.

Zhu, Youjian, Kwong, Chi Wai, Van Eyk, Philip J., de Nys, Rocky, Wang, Dingbiao, and Ashman, Peter J. (2015) Pyrolysis characteristics and char reactivity of Oedogonium sp. and Loy Yang coal. Energy & Fuels, 29 (8). pp. 5047-5055.

Capper, Roxana L., Jin, Young K., Lundgren, Petra B., Peplow, Lesa M., Matz, Mikhail V., and van Oppen, Madeleine J.H. (2015) Quantitative high resolution melting: two methods to determine SNP allele frequencies from pooled samples. BMC Genetics, 16. 62. pp. 1-13.

Carlson, John K., and Simpfendorfer, Colin A. (2015) Recovery potential of smalltooth sawfish, Pristis pectinata, in the United States determined using population viability models. Aquatic Conservation: marine and freshwater ecosystems , 25 (2). pp. 187-200.

Andrews, Allen H., Choat, John H., Hamilton, Richard J., and DeMartini, Edward E. (2015) Refined bomb radiocarbon dating of two iconic fishes of the Great Barrier Reef. Marine and Freshwater Research, 66 (4). pp. 305-316.

Kramer, Michael J., Bellwood, Orpha, Fulton, Christopher J., and Bellwood, David R. (2015) Refining the invertivore: diversity and specialisation in fish predation on coral reef crustaceans. Marine Biology, 162 (9). pp. 1779-1786.

Munroe, S.E.M., Heupel, M.R., Fisk, A.T., Logan, M., and Simpfendorfer, C.A. (2015) Regional movement patterns of a small-bodied shark revealed by stable-isotope analysis. Journal of Fish Biology, 86 (5). pp. 1567-1586.

Lane, Daniel J., van Eyk, Philip J., Ashman, Peter J., Kwong, Chi W., de Nys, Rocky, Roberts, David A., Cole, Andrew J., and Lewis, David M. (2015) Release of Cl, S, P, K, and Na during thermal conversion of algal biomass. Energy & Fuels, 29 (4). pp. 2542-2554.

Moorhead, Jonathan A. (2015) Research-scale tank designs for the larval culture of marine ornamental species, with emphasis on fish. Aquacultural Engineering, 64. pp. 32-41.

Karthikeyan, O.P., Karthigeyan, C.P., Cirés, Samuel, and Heimann, Kirsten (2015) Review of sustainable methane mitigation and bio-polymer production. Critical Reviews in Environmental Science and Technology, 45. pp. 1579-1610.

Chidambarampadmavathy, Karthigeyan, Kartikeyan, Obulisamy P., and Heimann, Kirsten (2015) Role of copper and iron in methane oxidation and bacterial biopolymer accumulation. Engineering in Life Sciences, 15. pp. 387-399.

Welsh, Justin Q., and Bellwood, David R. (2015) Simulated macro-algal outbreak triggers a large-scale response on coral reefs. PLoS One, 10 (7). e0132895. pp. 1-16.

Eriksen, Marit Skog, Poppe, Trygve T., McCormick, Mark, Damsgard, Børge, Salte, Ragnar, Braastad, Bjarne O., and Bakken, Morten (2015) Simulated maternal pre-spawning stress affects offspring's attributes in farmed Atlantic salmon Salmo salar (Linnaeus, 1758). Aquaculture Research, 46 (6). pp. 1480-1489.

Flint, Nicole, Crossland, Michael R., and Pearson, Richard G. (2015) Sublethal effects of fluctuating hypoxia on juvenile tropical Australian freshwater fish. Marine and Freshwater Research, 66 (4). pp. 293-304.

Bourne, D.G., Ainsworth, T.D., Pollock, F.J., and Willis, B.L. (2015) Towards a better understanding of white syndromes and their causes on Indo-Pacific coral reefs. Coral Reefs, 34 (1). pp. 233-242.

Trujillo González, Alejandro, Constantinoiu, Constantin C., Rowe, Richard, and Hutson, Kate S. (2015) Tracking transparent monogenean parasites on fish from infection to maturity. International Journal for Parasitology: Parasites and Wildlife, 4 (3). pp. 316-322.

Donelson, Jennifer M., and Munday, Philip L. (2015) Transgenerational plasticity mitigates the impact of global warming to offspring sex ratios. Global Change Biology, 21 (8). pp. 2954-2962.

Domingos, Jose A., Zenger, Kyall R., and Jerry, Dean R. (2015) Whole-genome shotgun sequence assembly enables rapid gene characterization in the tropical fish barramundi, Lates calcarifer. Animal Genetics, 46 (4). pp. 468-469.

Fox, Rebecca J., Bellwood, David R., and Jennions, Michael D. (2015) Why pair? Evidence of aggregative mating in a socially monogamous marine fish (Siganus doliatus, Siganidae). Royal Society Open Science, 2. 150252. pp. 1-7.

Brooker, Rohan M., Munday, Philip L., Chivers, Douglas P., and Jones, Geoffrey P. (2015) You are what you eat: diet-induced chemical crypsis in a coral-feeding reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1799). 20141887.

Spanier, Ehud, Lavalli, Kari L., Goldstein, Jason S., Groeneveld, Johan C., Jordaan, Gareth L., Jones, Clive M., Phillips, Bruce F., Bianchini, Marco L., Kibler, Rebecca D., Díaz, David, Mallol, Sandra, Goñi, Raquel, van Der Meeren, Gro I., Agnalt, Ann-Lisbeth, Behringer, Donald C., Keegan, William F., and Jeffs, Andrew (2015) A concise review of lobster utilization by worldwide human populations from prehistory to the modern era. ICES Journal of Marine Science, 72 (Supplement 1). pp. 7-21.

van de Water, A.J.M., Ainsworth, Tracy D., Leggat, William, Bourne, David G., Willis, Bette L., and Van Oppen, Madeleine J.H. (2015) The coral immune response facilitates protection against microbes during tissue regeneration. Molecular Ecology, 24 (13). pp. 3390-3404.

Lawton, Rebecca J., de Nys, Rocky, Magnusson, Marie E., and Paul, Nicholas A. (2015) The effect of salinity on the biomass productivity, protein and lipid composition of a freshwater macroalga. Algal Research, 12. pp. 213-220.

Ferrari, Maud C.O., McCormick, Mark I., Allan, Bridie J.M., Choi, Rebecca, Ramasamy, Ryan A., and Chivers, Douglas P. (2015) The effects of background risk on behavioural lateralization in a coral reef fish. Functional Ecology, 29 (12). pp. 1553-1559.

Silva Leal, Isabela Carolina, de Araújo, Maria Elisabeth, da Cunha, Simone Rabelo, and Cipresso Pereira, Pedro Henrique (2015) The influence of fire-coral colony size and agonistic behaviour of territorial damselfish on associated coral reef fish communities. Marine Environmental Research, 108. pp. 45-54.

Russ, Garry R., Questel, Sarah-Lee A., Rizzari, Justin R., and Alcala, Angel C. (2015) The parrotfish-coral relationship: refuting the ubiquity of a prevailing paradigm. Marine Biology, 162 (10). pp. 2029-2045.

Machado, Lorenna, Kinley, Robert D., Magnusson, Marie, de Nys, Rocky, and Tomkins, Nigel W. (2015) The potential of macroalgae for beef production systems in Northern Australia. Journal of Applied Phycology, 27 (5). pp. 2001-2005.

Bonin, Mary C., Boström-Einarsson, Lisa, Munday, Philip L., and Jones, Geoffrey P. (2015) The prevalence and importance of competition among coral reef fishes. Annual Review of Ecology, Evolution, and Systematics, 46. pp. 169-190.

Nagelkerken, Ivan, Sheaves, Marcus, Baker, Ronald, and Connolly, Rod M. (2015) The seascape nursery: a novel spatial approach to identify and manage nurseries for coastal marine fauna. Fish and Fisheries, 16 (2). pp. 362-371.

Trieu, Nancy, Cutmore, Scott C., Miller, Terrence L., and Cribb, Thomas H. (2015) A species pair of Bivesicula Yamaguti, 1934 (Trematoda: Bivesiculidae) in unrelated Great Barrier Reef fishes: implications for the basis of speciation in coral reef fish trematodes. Systematic Parasitology, 91 (3). pp. 231-239.

Williamson, David H., Ceccarelli, Daniela M., Evans, Richard D., Hill, Jos K., and Russ, Garry R. (2014) Derelict fishing line provides a useful proxy for estimating levels of non-compliance with no-take marine reserves. PLoS One, 9 (12). e114395. pp. 1-21.

Hughes, Terry P., Bellwood, David R., Connolly, Sean R., Cornell, Howard V., and Karlson, Ronald H. (2014) Double jeopardy and global extinction risk in corals and reef fishes. Current Biology, 24 (24). pp. 2946-2951.

Rivera-Posada, Jairo, Pratchett, Morgan S., Aguilar, Catalina, Grand, Alexandra, and Caballes, Ciemon F. (2014) Bile salts and the single-shot lethal injection method for killing crown-of-thorns sea stars (Acanthaster planci). Ocean & Coastal Management, 102 (A). pp. 383-390.

Taylor, Brett M., Houk, Peter, Russ, Garry R., and Choat, J. Howard (2014) Life histories predict vulnerability to overexploitation in parrotfishes. Coral Reefs, 33 (4). pp. 869-878.

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Mansour, Hicham, Perumal, Sadhasivam, Williamson, David H., and Berumen, Michael L. (2014) Validation of microsatellite multiplexes for parentage analysis in a coral reef fish (Lutjanus carponotatus, Lutjanidae). Conservation Genetics Resources, 6 (4). pp. 803-806.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Abdo, David, Webster, Nicole, and Whalan, Steve (2014) The influence of habitat on post-settlement processes, larval production and recruitment in a common coral reef sponge. Journal of Experimental Marine Biology and Ecology, 461. pp. 162-172.

Rigby, Cassandra L., Wedding, Brett B., Grauf, Steve, and Simpfendorfer, Colin A. (2014) The utility of near infrared spectroscopy for age estimation of deepwater sharks. Deep-sea Research Part I: Oceanographic Research Papers, 94. pp. 184-194.

Cole, Andrew J., Mata, Leonardo, Paul, Nicholas A., and De Nys, Rocky (2014) Using CO₂ to enhance carbon capture and biomass applications of freshwater macroalgae. GCB Bioenergy, 6. pp. 637-645.

Sharp, Michael F., Kamath, Sandip D., Koeberl, Martina, Jerry, Dean R., O'Hehir, Robyn E., Campbell, Dianne E., and Lopata, Andreas L. (2014) Differential IgE binding to isoallergens from Asian seabass (Lates calcarifer) in children and adults. Molecular Immunology, 62 (1). pp. 77-85.

Hodge, Jennifer R., Van Herwerden, Lynne , and Bellwood, David R. (2014) Temporal evolution of coral reef fishes: global patterns and disparity in isolated locations. Journal of Biogeography, 41 (11). pp. 2115-2127.

Cutmore, Scott C., Miller, Terrence L., Bray, Rodney A., and Cribb, Thomas H. (2014) A new species of Plectognathotrema Layman, 1930 (Trematoda: Zoogonidae) from an Australian monacanthid, with a molecular assessment of the phylogenetic position of the genus. Systematic Parasitology, 89 (3). pp. 237-246.

Wenger, Amelia S., McCormick, Mark I., Endo, Geoff G.K., McLeod, Ian M., Kroom, Frederieke J., and Jones, Geoffrey P. (2014) Suspended sediment prolongs larval development in a coral reef fish. Journal of Experimental Biology, 217. pp. 1122-1128.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Moser, Gerhard, Raadsma, Herman W., Taylor, Joseph J., and Zenger, Kyall R. (2014) Determining genetic contributions to host oyster shell growth: quantitative trait loci and genetic association analysis for the silver-lipped pearl oyster, Pinctada maxima. Aquaculture, 434. pp. 367-375.

Lavoué, Sébastien, Nakayama, Kouji, Jerry, Dean R., Yamanoue, Yusuke, Yagishita, Naoki, Suzuki, Nobuaki, Nishida, Mutsumi, and Miya, Masaki (2014) Mitogenomic phylogeny of the Percichthyidae and Centrarchiformes (Percomorphaceae): comparison with recent nuclear gene-based studies and simultaneous analysis. Gene, 549 (1). pp. 46-57.

Lema, Kimberley A., Willis, Bette L., and Bourne, David G. (2014) Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome. Environmental Microbiology, 16 (10). pp. 3345-3359.

Kohli, Gurjeet S., Murray, Shauna A., Neilan, Brett A., Rhodes, Lesley L., Harwood, D. Tim, Smith, Kirsty F., Meyer, Lauren, Capper, Angela, Brett, Steve, and Hallegraeff, Gustaaf M. (2014) High abundance of the potentially maitotoxic dinoflagellate Gambierdiscus carpenteri in temperate waters of New South Wales, Australia. Harmful Algae, 39. pp. 134-145.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Moser, Gerhard, Raadsma, Herman W., Taylor, Joseph J., and Zenger, Kyall R. (2014) Quantitative trait loci and genetic association analysis reveals insights into complex pearl quality traits in donor silver-lipped pearl oysters. Aquaculture, 434. pp. 476-485.

Rodolfo-Metalpa, Riccardo, Hoogenboom, Mia O., Rottier , Cécile, Ramos-Esplá, Alfonso, Baker, Andrew C., Fine, Maoz, and Ferrier-Pagès, Christine (2014) Thermally tolerant corals have limited capacity to acclimatize to future warming. Global Change Biology, 20 (10). pp. 3036-3049.

Alajmi, Fahad, and Zeng, Chaoshu (2014) The effects of stocking density on key biological parameters influencing culture productivity of the calanoid copepod, Parvocalanus crassirostris. Aquaculture, 434. pp. 201-207.

Kramer, M.J., Bellwood, D.R., and Bellwood, O. (2014) Benthic Crustacea on coral reefs: a quantitative survey. Marine Ecology Progress Series, 511. pp. 105-116.

Cirés, Samuel, Alvarez-Roa, Carlos, Wood, Susanna A., Puddick, Jonathan, Loza, Virginia, and Heimann, Kirsten (2014) First report of microcystin-producing Fischerella sp. (Stigonematales, Cyanobacteria) in tropical Australia. Toxicon, 88. pp. 62-66.

Espinoza, Mario, Cappo, Mike, Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2014) Quantifying shark distribution patterns and species-habitat associations: implications of marine park zoning. PLoS ONE, 9 (9). e106885. pp. 1-17.

Wolanski, Eric, and Kingsford, Michael J. (2014) Oceanographic and behavioural assumptions in models of the fate of coral and coral reef fish larvae. Journal of the Royal Society Interface, 11 (98). 20140209. pp. 1-12.

Pratchett, Morgan S., Hoey, Andrew S., Cvitanovic, Christopher, Hobbs, Jean-Paul, and Fulton, Christopher J. (2014) Abundance, diversity, and feeding behavior of coral reef butterflyfishes at Lord Howe Island. Ecology and Evolution, 4 (18). pp. 3612-3625.

Taylor, B.M., Rhodes, K.L., Marshell, A., and McIlwain, J.L. (2014) Age-based demographic and reproductive assessment of orangespine Naso lituratus and bluespine Naso unicornis unicornfishes. Journal of Fish Biology, 85 (3). pp. 901-916.

Mouillot, David, Villéger, Sébastien, Parravicini, Valeriano, Kulbicki, Michel, Ernesto Arias-González, Jesus, Bender, Mariana, Chabanet, Pascale, Floeter, Sergio R., Friedlander, Alan, Vigliola, Laurent, and Bellwood, David R. (2014) Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs. Proceedings of the National Academy of Sciences of the United States of America, 111 (38). pp. 13757-13762.

Parravicini, Valeriano, Villéger, Sébastien, McClanahan, Tim R., Arias-González, Jesus Ernesto, Bellwood, David R., Belmaker, Jonathan, Chabanet, Pascale, Floeter, Sergio R., Friedlander, Alan M., Guilhaumon, François, Vigliola, Laurent, Kulbicki, Michel, and Mouillot, David (2014) Global mismatch between species richness and vulnerability of reef fish assemblages. Ecology Letters, 17 (9). pp. 1101-1110.

Kramer, M.J., Bellwood, D.R., and Bellwood, O. (2014) Large‐scale spatial variation in epilithic algal matrix cryptofaunal assemblages on the Great Barrier Reef. Marine Biology, 161 (9). pp. 2183-2190.

Xu, Su Yun, Karthigkeyan, Obuli P., Selvam , Ammaiyappan, and Wong, Jonathan W.C (2014) Microbial community distribution and extracellular enzyme activities in leach bed reactor treating food waste: Effect of different leachate recirculation practices. Bioresource Technology, 168. pp. 41-48.

Alajmi, Fahad, Zeng, Chaoshu, and Jerry, Dean R. (2014) Improvement in the reproductive productivity of the tropical calanoid copepod Parvocalanus crassirostris through selective breeding. Aquaculture, 420–421. pp. 18-23.

Langlois, Lucas A., and Hoogenboom, Mia O. (2014) Capacity for short-term physiological acclimation to light does not control the lower depth distributions of branching corals. Marine Ecology Progress Series, 508. pp. 149-162.

Magnusson, Marie, Mata, Leonardo, De Nys, Rocky, and Paul, Nicholas (2014) Biomass, lipid and fatty acid production in large-scale cultures of the marine macroalga Derbesia tenuissima (Chlorophyta). Marine Biotechnology, 16 (4). pp. 456-464.

Paul, Nicholas A., Neveux, Nicolas, Magnusson, Marie, and De Nys, Rocky (2014) Comparative production and nutritional value of "sea grapes" — the tropical green seaweeds Caulerpa lentillifera and C. racemosa. Journal of Applied Phycology, 26 (4). pp. 1833-1844.

Do Huu, Hoang, and Jones, Clive M. (2014) Effects of dietary mannan oligosaccharide supplementation on juvenile spiny lobster Panulirus homarus (Palinuridae). Aquaculture, 432. pp. 258-264.

Miller, Kelsey Irene, and Russ, Garry Ronald (2014) Studies of no-take marine reserves: methods for differentiating reserve and habitat effects. Ocean & Coastal Management, 96. pp. 51-60.

Pollock, F. Joseph, Lamb, Joleah B., Field, Stuart N., Heron, Scott F., Schaffelke, Britta, Shedrawi, George, Bourne, David G., and Willis, Bette L. (2014) Sediment and turbidity associated with offshore dredging increase coral disease prevalence on nearby reefs. PLoS ONE, 9 (7). e102498. pp. 1-9.

Huerlimann, Roger, Steinig, Eike J., Loxton, Heather, Zenger, Kyall R., Jerry, Dean R., and Heimann, Kirsten (2014) Effects of growth phase and nitrogen starvation on expression of fatty acid desaturases and fatty acid composition of Isochrysis aff. galbana (TISO). Gene, 545 (1). pp. 36-44.

Cole, Andrew J., de Nys, Rocky, and Paul, Nicholas A. (2014) Removing constraints on the biomass production of freshwater macroalgae by manipulating water exchange to manage nutrient flux. PLoS ONE, 9 (7). e101284. pp. 1-9.

Tobin, Andrew J., Mapleston, Amos, Harry, Alastair V., and Espinoza, Mario (2014) Big fish in shallow water; use of an intertidal surf-zone habitat by large-bodied teleosts and elasmobranchs in tropical northern Australia. Environmental Biology of Fishes, 97 (7). pp. 821-838.

Sheaves, Marcus, Brookes, Justin, Coles, Robert, Freckelton, Marnie, Groves, Paul, Johnston, Ross, and Wingberg, Pia (2014) Repair and revitalisation of Australia's tropical estuaries and coastal wetlands: opportunities and constraints for the reinstatement of lost function and productivity. Marine Policy, 47. pp. 23-38.

Kidgell, Joel T., de Nys, Rocky, Paul, Nicholas A., and Roberts, David A. (2014) The sequential application of macroalgal biosorbents for the bioremediation of a complex industrial effluent. PLoS ONE, 9 (7). e101309.

Welladsen, Heather, Kent, Megan, Mangott, Arnold, and Li, Yan (2014) Shelf-life assessment of microalgae concentrates: effect of cold preservation on microalgal nutrition profiles. Aquaculture, 430. pp. 241-247.

Huerlimann, Roger, Steinig, Eike J., Loxton, Heather, Zenger, Kyall, Jerry, Dean R., and Heimann, Kirsten (2014) The effect of nitrogen limitation on acetyl-CoA carboxylase expression and fatty acid content in Chromera velia and Isochrysis aff. galbana (TISO). Gene, 543 (2). pp. 204-211.

Carl, Christina, de Nys, Rocky, and Paul, Nicholas A. (2014) The seeding and cultivation of a tropical species of filamentous ulva for algal biomass production. PLoS ONE, 9 (6). e98700. pp. 1-9.

Lane, Daniel J., Zevenhoven, Maria, Ashman, Peter J., van Eyk, Philip J., Hupa, Mikko, de Nys, Rocky, and Lewis, David M. (2014) Algal biomass: occurrence of the main inorganic elements and simulation of ash interactions with bed material. Energy & Fuels, 28 (7). pp. 4622-4632.

Kidgell, Joel T., de Nys, Rocky, Hu, Yi, Paul, Nicholas A., and Roberts, David A. (2014) Bioremediation of a complex industrial effluent by biosorbents derived from freshwater macroalgae. PLoS ONE, 9 (6). e94706. pp. 1-9.

Connolly, Sean R., Macneil, M. Aaron, Caley, M. Julian, Knowlton, Nancy, Cripps, Ed, Hisano, Mizue, Thibaut, Loïc M., Bhattacharya, Bhaskar D., Benedetti-Cechi, Lisandro, Brainard, Russell E., Brandt, Angelika, Bulleri, Fabio, Ellingsen, Kari E., Kaiser, Stefanie, Kröncke, Ingrid, Linse, Katrin, Maggi, Elena, O'Hara, Timothy D., Plaisance, Laetititia, Poore, Gary C.B., Sarkar, Santosh K., Satpathy, Kamala, Schückel, Ulrike, Williams, Alan, and Wilson, Robin S. (2014) Commonness and rarity in the marine biosphere. Proceedings of the National Academy of Sciences of the United States of America, 111 (23). pp. 8524-8529.

Montanari, Stefano R., Hobbs, Jean-Paul A., Pratchett, Morgan S., Bay, Line K., and Van Herwerden, Lynne (2014) Does genetic distance between parental species influence outcomes of hybridization among coral reef butterflyfishes? Molecular Ecology, 23 (11). pp. 2757-2770.

Fox, Rebecca J., and Bellwood, David R. (2014) Herbivores in a small world: network theory highlights vulnerability in the function of herbivory on coral reefs. Functional Ecology, 28 (3). pp. 642-651.

Bentley, B.P., Harvey, E.S., Newman, S.J., Welch, D.J., Smith, A.K., and Kennington, W.J. (2014) Local genetic patchiness but no regional differences between Indo-West Pacific populations of the dogtooth tuna Gymnosarda unicolor. Marine Ecology Progress Series, 506. pp. 267-277.

Chong-Seng, K.M., Nash, K.L., Bellwood, D.R., and Graham, N.A.J. (2014) Macroalgal herbivory on recovering versus degrading coral reefs. Coral Reefs, 33 (2). pp. 409-419.

Brandl, S.J., Hoey, A.S., and Bellwood, D.R. (2014) Micro-topography mediates interactions between corals, algae, and herbivorous fishes on coral reefs. Coral Reefs, 33 (2). pp. 421-430.

Abdul Wahab, M., De Nys, R., Webster, N., and Whalan, S. (2014) Phenology of sexual reproduction in the common coral reef sponge, Carteriospongia foliascens. Coral Reefs, 33 (2). pp. 381-394.

Trave, Claudia, and Sheaves, Marcus (2014) Bimini Islands: a characterization of the two major nursery areas; status and perspectives. SpringerPlus, 3. 270. pp. 1-9.

Ellison, Michael B., de Nys, Rocky, Paul, Nicholas A., and Roberts, David A. (2014) Growth and metal bioconcentration by conspecific freshwater macroalgae cultured in industrial waste water. PeerJ, 2. e401. pp. 1-17.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Webster, Nicole, and Whalan, Steve (2014) Larval behaviours and their contribution to the distribution of the intertidal coral reef sponge Carteriospongia foliascens. PLoS ONE, 9 (5). e98181. pp. 1-13.

Carl, Christina, de Nys, Rocky, Lawton, Rebecca J., and Paul, Nicholas A. (2014) Methods for the induction of reproduction in a tropical species of filamentous Ulva. PLoS ONE, 9 (5). e97396. pp. 1-10.

Militz, T.A., Southgate, P.C., Carton, A.G., and Hutson, K.S. (2014) Efficacy of garlic (Allium sativum) extract applied as a therapeutic immersion treatment for Neobenedenia sp. management in aquaculture. Journal of Fish Diseases, 37 (5). pp. 451-461.

Brandl, Simon J., and Bellwood, David R. (2014) Individual-based analyses reveal limited functional overlap in a coral reef fish community. Journal of Animal Ecology, 83 (3). pp. 661-670.

Donelson, Jennifer M., McCormick, Mark I., Booth, David J., and Munday, Philip L. (2014) Reproductive acclimation to increased water temperature in a tropical reef fish. PLoS ONE, 9 (5). e97223. pp. 1-9.

Agha, Ramsy, Lezcano, María Ángeles, Labrador, María del Mar, Cirés, Samuel, and Quesada, Antonio (2014) Seasonal dynamics and sedimentation patterns of Microcystis oligopeptide-based chemotypes reveal subpopulations with different ecological traits. Limnology and Oceanography, 59 (3). pp. 861-871.

Abdul Wahab, Muhammad, Fromont, J., Whalan, S., Webster, N., and Andreakis, N. (2014) Combining morphometrics with molecular taxonomy: how different are similar foliose keratose sponges from the Australian tropics? Molecular Phylogenetics and Evolution, 73. pp. 23-39.

Stella, J.S, Munday, P.L., Walker, S.P.W., Pratchett, M.S., and Jones, G.P. (2014) From cooperation to combat: adverse effect of thermal stress in a symbiotic coral-crustacean community. Oecologia, 174 (4). pp. 1187-1195.

Clements, Kendall D., Angert, Esther R., Montgomery, W. Linn, and Choat, Howard (2014) Intestinal microbiota in fishes: what's known and what's not. Molecular Ecology, 23 (8). pp. 1891-1898.

Poulos, Davina E., and McCormick, Mark I. (2014) Who wins in the battle for space? The importance of priority, behavioural history and size. Animal Behaviour, 90. pp. 305-314.

Lawton, Rebecca J., de Nys, Rocky, Skinner , Stephen, and Paul, Nicholas A. (2014) Isolation and identification of Oedogonium species and strains for biomass applications. PLoS ONE, 9 (3). e90223. pp. 1-9.

Tremblay, P., Grover, R., Maguer, J.F., Hoogenboom, M., and Ferrier-Pagès, C. (2014) Carbon translocation from symbiont to host depends on irradiance and food availability in the tropical coral Stylophora pistillata. Coral Reefs, 33 (1). pp. 1-13.

Vucko, M.J., King, P.C., Poole, A.J., Hu, Yi, Jahedi, M.Z., and de Nys, R. (2014) Assessing the antifouling properties of cold-spray metal embedment using loading density gradients of metal particles. Biofouling, 30 (6). pp. 651-666.

Tang, Lei, Smith-Keune, Carolyn, Gardner, Michael G., and Hardesty, Britta Denise (2014) Development, characterisation and cross-species amplification of 16 novel microsatellite markers for the endangered Black-throated Finch (Poephila cincta) in Australia. Conservation Genetics Resources, 6 (1). pp. 143-146.

Ban, Stephen S., Graham, Nicholas A.J., and Connolly, Sean R. (2014) Evidence for multiple stressor interactions and effects on coral reefs. Global Change Biology, 20 (3). pp. 681-697.

Baker, Ronald, Buckland, Amanda, and Sheaves, Marcus (2014) Fish gut content analysis: robust measures of diet composition. Fish and Fisheries, 15 (1). pp. 170-177.

D'agata, Stéphanie, Mouillot, David, Kulbicki, Michel, Andréföuet, Serge, Bellwood, David R., Cinner, Joshua E., Cowman, Peter F., Kronen, Mecki, Pinca, Silvia, and Vigliola, Laurent (2014) Human-mediated loss of phylogenetic and functional diversity in coral reef fishes. Current Biology, 24 (5). pp. 555-560.

Wakefield, Corey B., Williams, Ashley, Newman, Steve J., Bunel, Melanie, Dowling, Christopher E., Armstrong, Chella A., and Langlois, Tim J. (2014) Rapid and reliable multivariate discrimination for two cryptic Eteline snappers using otolith morphometry. Fisheries Research , 151. pp. 100-106.

Welsh, Stuart A., Jerry, Dean R., and Burrows, Damien W. (2014) A new species of freshwater eel-tailed catfish of the genus Tandanus (Teleostei: Plotosidae) from the wet tropics region of Eastern Australia. Copeia, 1. pp. 136-142.

Shimazu, Takeshi, Cribb, Thomas H., Miller, Terrence L., Urabe, Misako, Van Ha, Nguyen, Thi Binh, Tran, and Shed'ko, Marina B. (2014) Revision of Isoparorchis Southwell, 1913 (Digenea, Hemiuroidea, Isoparorchiidae), parasites of the air bladder of freshwater catfishes: a molecular and morphological study. Bulletin of National Museum of Natural Science, Series A, 40 (1). pp. 15-51.

Chung, Wen-Sung, Marshall, N. Justin, Watson, Sue-Ann, Munday, Philip L., and Nilsson, Göran E. (2014) Ocean acidification slows retinal function in a damselfish through interference with GABAA receptors. Journal of Experimental Biology, 217. pp. 323-326.

Hobbs, J.-P.A., Frisch, A.J., Mutz, S., and Ford, B.M. (2014) Evaluating the effectiveness of teeth and dorsal fin spines for non-lethal age estimation of a tropical reef fish, coral trout Plectropomus leopardus. Journal of Fish Biology, 84 (2). pp. 328-338.

Chivers, Douglas P., McCormick, Mark I., Nilsson, Göran E., Munday, Philip L., Watson, Sue-Ann, Meekan, Mark, Mitchell, Matthew D., Corkill, Katherine C., and Ferrari, Maud C.O. (2014) Impaired learning about predators and lower survival under elevated CO2: a consequence of neurotransmitter interference. Global Change Biology, 20 (2). pp. 515-522.

Gamble, S., Carton, A.G., and Pirozzi, I. (2014) Open-top static respirometry is a reliable method to determine the routine metabolic rate of barramundi, Lates calcarifer. Marine and Freshwater Behaviour and Physiology, 47 (1). pp. 19-28.

Kingsford, M.J., Finn, M.D., O'Callaghan, M.D., Atema, J., and Gerlach, G. (2014) Planktonic larval duration, age and growth of Ostorhinchus doederleini (Pisces: Apogonidae) on the southern Great Barrier Reef, Australia. Marine Biology, 161 (2). pp. 245-259.

Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2014) Variation in amino acid content and its relationship to nitrogen content and growth rate in Ulva ohnoi (Chlorophyta). Journal of Phycology, 50 (1). pp. 216-226.

Domenici, Paolo, Allan, Bridie J.M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2014) Shifting from right to left: the combined effect of elevated CO2 and temperature on behavioural lateralization in a coral reef fish. PLoS One, 9 (1). e87969. pp. 1-6.

Paul, Nicholas A., Svensson, Carl Johan, de Nys, Rocky, and Steinberg, Peter D. (2014) Simple growth patterns can create complex trajectories for the ontogeny of constitutive chemical defences in seaweeds. PLoS ONE, 9 (1). e86893. pp. 1-10.

Taylor, Brett M. (2014) Drivers of protogynous sex change differ across spatial scales. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1775). 20132423. pp. 1-8.

Machado, Lorenna, Magnusson, Marie, Paul, Nicholas A., de Nys, Rocky, and Tomkins, Nigel (2014) Effects of marine and freshwater macroalgae on in vitro total gas and methane production. PLoS ONE, 9 (1). e85289. pp. 1-11.

Frisch, Ashley J., Ireland, Matthew, and Baker, Ronald (2014) Trophic ecology of large predatory reef fishes: energy pathways, trophic level, and implications for fisheries in a changing climate. Marine Biology, 161 (1). pp. 61-73.

McNamara, M.K.A., Miller, T.L., and Cribb, T.H. (2014) Evidence for extensive cryptic speciation in trematodes of butterflyfishes (Chaetodontidae) of the tropical Indo-West Pacific. International Journal for Parasitology, 44 (1). pp. 37-48.

Bellwood, David R., Hoey, Andrew S., Bellwood, Orpha, and Goatley, Christopher H.R. (2014) Evolution of long-toothed fishes and the changing nature of fish-benthos interactions on coral reefs. Nature Communications, 5. 3144. pp. 1-6.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., and Thorrold, Simon R. (2014) Experimental evaluation of imprinting and the role innate preference plays in habitat selection in a coral reef fish. Oecologia, 174 (1). pp. 99-107.

Johansen, Jacob L. (2014) Quantifying water flow within aquatic ecosystems using load cell sensors: a profile of currents experienced by coral reef organisms around Lizard Island, Great Barrier Reef, Australia. PLoS ONE, 9 (1). e83240. pp. 1-9.

von der Heyden, Sophie, Beger, Maria, Toonen, Robert J., van Herwerden, Lynne, Juinio-Meñez, Marie Antonette, Ravago-Gotanco, Rachel, Fauvelot, Cecile, and Bernardi, Giacomo (2014) The application of genetics to marine management and conservation: examples from the Indo-Pacific. Bulletin of Marine Science, 90 (1). pp. 123-158.

Pollock, F. Joseph, Wood-Charlson, Elisha M., van Oppen, Madeleine J.H., Bourne, David G., Willis, Bette L., and Weynberg, Karen D. (2014) Abundance and morphology of virus-like particles associated with the coral Acropora hyacinthus differ between healthy and white syndrome-infected states. Marine Ecology - Progress Series, 510. pp. 39-43.

Bowden, A.J., Gardiner, N.M., Couturier, C.S., Stecyk, J.A.W, Nilsson, G.E., Munday, P.L., and Rummer, J.L. (2014) Alterations in gill structure in tropical reef fishes as a result of elevated temperatures. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 175. pp. 64-71.

Neveux, N., Yuen, A.K.L., Jazrawi, C., Magnusson, M., Haynes, B.S., Masters, A.F., Montoya, A., Paul, N.A., Maschmeyer, T., and de Nys, R. (2014) Biocrude yield and productivity from the hydrothermal liquefaction of marine and freshwater green macroalgae. Bioresource Technology, 155. pp. 334-341.

Davis, Ben, Mattone, Carlo, and Sheaves, Marcus (2014) Bottom-up control regulates patterns of fish connectivity and assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 175-186.

Nolan, Matthew J., Miller, Terrence L., Cutmore, Scott C., Cantacessi, Cinzia, and Cribb, Thomas H. (2014) Cardicola beveridgei n. sp. (Digenea: Aporocotylidae) from the mangrove jack, Lutjanus argentimaculatus (Perciformes: Lutjanidae), and C. bullardi n. sp. from the Australian spotted mackerel, Scomberomorus munroi (Perciformes: Scombridae), from the northern Great Barrier Reef. Parasitology International, 63 (5). pp. 735-745.

Hobbs, Jean-Paul A., Newman, Stephen J., Mitsopoulos, Gabby E.A., Travers, Michael J., Skepper, Craig L., Gilligan, Justin J., Allen, Gerald R., Choat, Howard J., and Ayling, Anthony M. (2014) Checklist and new records of Christmas Island fishes: the influence of isolation, biogeography and habitat availability on species abundance and community composition. Raffles Bulletin of Zoology, Supplement No. 30. pp. 184-202.

Burge, Colleen A., Eakin, C. Mark, Friedman, Carolyn S., Froelich, Brett, Hershberger, Paul K., Hofmann, Eileen E., Petes, Laura E., Prager, Katherine C., Weil, Ernesto, Willis, Bette, Ford, Susan E., and Harvell, C. Drew (2014) Climate change influences on marine infectious diseases: implications for management and society. Annual Review of Marine Science, 6. pp. 249-277.

Lane, Daniel J., Ashman, Peter J., Zevenhoven, Maria, Hupa, Mikko, van Eyk, Philip J., de Nys, Rocky, Karlström, Oskar, and Lewis, David M. (2014) Combustion behavior of algal biomass: carbon release, nitrogen release, and char reactivity. Energy & Fuels, 28 (1). pp. 41-51.

Kan, Tao, Grierson, Scott, De Nys, Rocky, and Strezov, Vladimir (2014) Comparative assessment of the thermochemical conversion of freshwater and marine micro- and macroalgae. Energy & Fuels, 28 (1). ef401568s. pp. 104-114.

Taylor, B.M., and Choat, J.H. (2014) Comparative demography of commercially important parrotfish species from Micronesia. Journal of Fish Biology, 84 (2). pp. 383-402.

Macintosh, Hugh, de Nys, Rocky, and Whalan, Steve (2014) Contrasting life histories in shipworms: growth, reproductive development and fecundity. Journal of Experimental Marine Biology and Ecology, 459. pp. 80-86.

Rizzari, J.R., and Lönnstedt, O.M. (2014) Cooperative hunting and gregarious behaviour in the zebra lionfish, Dendrochirus zebra. Marine Biodiversity, 44 (4). pp. 467-468.

Katz, Sefano M., Pollock, F. Joseph, Bourne, D.G., and Willis, Bette L. (2014) Crown-of-thorns starfish predation and physical injuries promote brown band disease on corals. Coral Reefs, 33 (3). pp. 705-716.

Munroe, S.E.M., Simpfendorfer, Colin, and Heupel, M.R. (2014) Defining shark ecological specialisation: concepts, context, and examples. Reviews in Fish Biology and Fisheries, 24 (1). pp. 317-331.

Naidu, Suwastika, Chand, Anand, and Southgate, Paul (2014) Determinants of innovation in the handicraft industry of Fiji and Tonga: an empirical analysis from a tourism perspective. Journal of Enterprising Communities, 8 (4). pp. 318-330.

Lobato, Fabio L., Barneche, Diego R., Siqueira Correa, Alexandre C., Liedke, Ana M.R., Lindner, Alberto, Pie, Marcio R., Bellwood, David R., and Floeter, Sergio R. (2014) Diet and diversification in the evolution of coral reef fishes. PLoS ONE, 9 (7). e102094. pp. 1-11.

Tuller, James, De Santis, Christian, and Jerry, Dean R. (2014) Dietary influence of Fucoidan supplementation on growth of Lates calcarifer (Bloch). Aquaculture Research, 45 (4). pp. 749-754.

Udyawer, Vinay, Cappo, Mike, Simpfendorfer, Colin A., Heupel, Michelle R., and Lukoschek, Vimoksalehi (2014) Distribution of sea snakes in the Great Barrier Reef Marine Park: observations from 10 yrs of baited remote underwater video station (BRUVS) sampling. Coral Reefs, 33 (3). pp. 777-791.

McLean, Montana F., Simpfendorfer, Colin A., Heupel, Michelle R., Dadswell, Michael J., and Stokesbury, Michael J.W. (2014) Diversity of behavioural patterns displayed by a summer feeding aggregation of Atlantic sturgeon in the intertidal region of Minas Basin, Bay of Fundy, Canada. Marine Ecology Progress Series, 496. pp. 59-69.

Kleinteich, J., Hildebrand, F., Wood, S.A., Cirés, Samuel, Agha, R., Quesada, A., Pearce, D.A., Convey, P., Küpper, F.C., and Dietrich, D.R. (2014) Diversity of toxin and non-toxin containing cyanobacterial mats of meltwater ponds on the Antarctic Peninsula: a pyrosequencing approach. Antarctic Science, 26 (5). pp. 521-532.

Rizzari, Justin R., Frisch, Ashley J., and Magnenat, Katalin A. (2014) Diversity, abundance, and distribution of reef sharks on outer-shelf reefs of the Great Barrier Reef, Australia. Marine Biology, 161 (12). pp. 2847-2855.

Domingos, Jose A., Smith-Keune, Carolyn, Harrison, Paul, and Jerry, Dean R. (2014) Early prediction of long-term family growth performance based on cellular processes: a tool to expedite the establishment of superior foundation broodstock in breeding programs. Aquaculture, 428-429. pp. 88-96.

Trave, Claudia, and Sheaves, Marcus (2014) Ecotone analysis: assessing the impact of vehicle transit on saltmarsh crab population and ecosystem. SpringerPlus, 3 (1). 655. pp. 1-9.

Collins, Geoffrey M., Ball, Andrew S., Qin, Jian G., Bowyer, Jenna N., and Stone, David A.J. (2014) Effect of alternative lipids and temperature on growth factor gene expression in yellowtail kingfish (Seriola lalandi). Aquaculture Research, 45 (7). pp. 1236-1245.

Islam, Muhammad Aminul, Brown, Richard J., O'Hara, Ian, Kent, Megan, and Heimann, Kirsten (2014) Effect of temperature and moisture on high pressure lipid/oil extraction from microalgae. Energy Conversion and Management, 88. pp. 307-316.

Athauda, Saman, and Anderson, Trevor (2014) Effect of temperature and salinity on sex inversion in Asian Seabass (Lates calcarifer): relationship with plasma sex steroids concentration and aromatase activity of gonad and brain. Aquaculture Research, 45. pp. 787-797.

Welch, Megan J., Welsh, Justin Q., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip (2014) Effects of elevated CO(2) on fish behaviour undiminished by transgenerational acclimation. Nature Climate Change, 4. pp. 1086-1089.

Carter, Alex B., Davies, Campbell R., Mapstone, Bruce D., Russ, Garry R., Tobin, Andrew J., and Williams, Ashley J. (2014) Effects of region, demography, and protection from fishing on batch fecundity of common coral trout (Plectropomus leopardus). Coral Reefs, 33 (3). pp. 751-763.

Linn, Saw Mya, Ishika, Manaba, Koshio, Shunsuke, Yokoyama, Saichiro, Murata, Takuya, Hamasaki, Yuta, and Nankervis, Leo (2014) Effects of replacing fish meal with plant protein on growth performance, feed utilization and oxidative condition of red sea bream Pagrus major. Aquaculture Science, 62 (4). pp. 341-352.

Waltrick, Daniela, Jones, Susan M., Simpfendorfer, Colin A., and Awruch, Cynthia A. (2014) Endocrine control of embryonic diapause in the Australian sharpnose shark Rhizoprionodon taylori. PLoS One, 9 (7). e101234. pp. 1-10.

Messmer, Vanessa, Blowes, Shane A., Jones, Geoffrey P., and Munday, Philip L. (2014) Experimental evaluation of diversity-productivity relationships in a coral reef fish assemblage. Oecologia, 176 (1). pp. 237-249.

Casey, Jordan M., Ainsworth, Tracy D., Choat, J. Howard, and Connolly, Sean R. (2014) Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1788). 20141032. pp. 1-8.

Domingos, Jose A., Smith-Keune, Carolyn, and Jerry, Dean R. (2014) Fate of genetic diversity within and between generations and implications for DNA parentage analysis in selective breeding of mass spawners: a case study of commercially farmed barramundi, Lates calcarifer. Aquaculture, 424-425. pp. 174-182.

Kemp, Darrell J., Jones, David, Macedonia, Joseph, and Krockenberger, Andrew K. (2014) Female mating preferences and male signal variation in iridescent Hypolimnas butterflies. Animal Behaviour, 87. pp. 221-229.

Bellwood, D.R., Goatley, C.H.R., Brandl, S.J., and Bellwood, O. (2014) Fifty million years of herbivory on coral reefs: fossils, fish and functional innovations. Proceedings of the Royal Society of London Series B, Biological Sciences, 281. 20133046. pp. 1-8.

Hobbs, Jean-Paul A., Newman, Stephen J., Mitsopoulos, Gabby E.A., Travers, Michael J., Skepper, Craig L., Gilligan, Justin J., Allen, Gerald R., Choat, Howard J., and Ayling, Anthony M. (2014) Fishes of the Cocos (Keeling) Islands: new records, community composition and biogeographic significance. Raffles Bulletin of Zoology: an international journal of Southeast Asian Zoology, Supplement 30. pp. 203-219.

Fraser, Matthew R., and McCormick, Mark I. (2014) Gender-specific benefits of eating eggs at resident reef fish spawning aggregation sites. Marine Ecology Progress Series, 517. pp. 209-216.

Noble, T.H., Smith-Keune, C., and Jerry, D.R. (2014) Genetic investigation of the large-scale escape of a tropical fish, barramundi Lates calcarifer, from a sea-cage facility in northern Australia. Aquaculture Environment Interactions, 5 (2). pp. 173-183.

Keith, Sally A., Kerswell, Ailsa P., and Connolly, Sean R. (2014) Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics. Global Ecology and Biogeography, 23 (5). pp. 517-529.

Romano, Nicholas, Wu, Xugan, Zeng, Chaoshu, Genodepa, Jerome, and Elliman, Jennifer (2014) Growth, osmoregulatory responses and changes to the lipid and fatty acid composition of organs from the mud crab, Scylla errata, over a road salinity range. Marine Biology Research, 10 (5). pp. 460-471.

Munroe, S.E.M., Simpfendorfer, C.A., and Heupel, M.R. (2014) Habitat and space use of an abundant nearshore shark, Rhizoprionodon taylori. Marine and Freshwater Research, 65 (11). pp. 959-968.

Lönnstedt, Oona M., and Frisch, Ashley J. (2014) Habitat bleaching disrupts threat responses and persistence in anemonefish. Marine Ecology Progress Series, 517. pp. 265-270.

Lönnstedt, Oona M., McCormick, Mark I., Chivers, Douglas P., and Ferrari, Maud C.O. (2014) Habitat degradation is threatening reef replenishment by making fish fearless. Journal of Animal Ecology, 83 (5). pp. 1178-1185.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2014) Habitat degradation modifies the strength of interspecific competition in coral dwelling damselfishes. Ecology, 95 (11). pp. 3056-3067.

Welsh, J.Q., and Bellwood, D.R. (2014) Herbivorous fishes, ecosystem function and mobile links on coral reefs. Coral Reefs, 33 (2). pp. 303-311.

Rizzari, Justin R., Frisch, Ashley J., and Connolly, Sean R. (2014) How robust are estimates of coral reef shark depletion? Biological Conservation, 176. pp. 39-47.

Heupel, M.R., and Simpfendorfer, C.A. (2014) Importance of environmental and biological drivers in the presence and space use of a reef-associated shark. Marine Ecology Progress Series, 496. pp. 47-57.

Figueiredo, Joana, Baird, Andrew, Harii, Saki, and Connolly, Sean R. (2014) Increased local retention of reef coral larvae as a result of ocean warming. Nature Climate Change, 4 (6). pp. 498-502.

Todd, Erica V., Blair, David, and Jerry, Dean R. (2014) Influence of drainage divides versus arid corridors on genetic structure and demography of a widespread freshwater turtle, Emydura macquarii krefftii, from Australia. Ecology and Evolution, 4 (5). pp. 606-622.

Schlaff, Audrey M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2014) Influence of environmental factors on shark and ray movement, behaviour and habitat use: a review. Reviews in Fish Biology and Fisheries, 24 (4). pp. 1089-1103.

Baker, Ronald, Fujiwara, Masami, and Minello, Thomas J. (2014) Juvenile growth and mortality effects on white shrimp Litopenaeus setiferus population dynamics in the northern Gulf of Mexico. Fisheries Research, 155. pp. 74-82.

Rummer, Jodie L., Couturier, Christine S., Stecyk, Jonathan A.W., Gardiner, Naomi, Kinch, Jeff P., Nilsson, Göran E., and Munday, Philip L. (2014) Life on the edge: thermal optima for aerobic scope of equatorial reef fishes are close to current day temperatures. Global Change Biology, 20 (4). 12. pp. 1055-1066.

Brunnschweiler, Juerg M., Abrantes, Kátya G., and Barnett, Adam (2014) Long-term changes in species composition and relative abundances of sharks at a provisioning site. PLoS ONE, 9 (1). e86682. pp. 1-10.

Watson, Sue-Ann, Lefevre, Sjannie, McCormick, Mark I., Domenici, Paolo, Nilsson, Göran E., and Munday, Philip L. (2014) Marine mollusc predator-escape behaviour altered by near-future carbon dioxide levels. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1774). 20132377. pp. 1-9.

Starrs, Danswell, Davis, Jacqueline T., Schlaefer, Jodie, Ebner, Brendan C., Eggins, Stephen, and Fulton, Christopher J. (2014) Maternally transmitted isotopes and their effects on larval fish: a validation of dual isotopic marks within a meta-analysis context. Canadian Journal of Fisheries and Aquatic Sciences, 71 (3). pp. 387-397.

Madin, Joshua S., Baird, Andrew H., Dornelas, Maria, and Connolly, Sean R. (2014) Mechanical vulnerability explains size-dependent mortality of reef corals. Ecology Letters, 17 (8). pp. 1008-1015.

Bunt, C.M., and Kingsford, M.J. (2014) Movement, habitat utilization and behaviour of coral trout Plectropomus leopardus during and after the reproductive period on the southern Great Barrier Reef. Marine Ecology Progress Series, 496. pp. 33-45.

Awruch, Cynthia A., Jones, Susan M., García Asorey, Martin, and Barnett, Adam (2014) Non-lethal assessment of the reproductive status of broadnose sevengill sharks (Notorynchus cepedianus) to determine the significance of habitat use in coastal areas. Conservation Physiology, 2 (1). cou013. pp. 1-14.

Rizzari, Justin R., Frisch, Ashley J., Hoey, Andrew S., and McCormick, Mark I. (2014) Not worth the risk: apex predators suppress herbivory on coral reefs. Oikos, 123 (7). pp. 829-836.

Lema, Kimberley A., Bourne, David G., and Willis, Bette L. (2014) Onset and establishment of diazotrophs and other bacterial associates in the early life history stages of the coral Acropora millepora. Molecular Ecology, 23 (19). pp. 4682-4695.

Wu, X.G., Zeng, C.S., and Southgate, P.C. (2014) Ontogenetic patterns of growth and lipid composition changes of blue swimmer crab larvae: insights into larval biology and lipid nutrition. Marine and Freshwater Research, 65 (3). pp. 228-243.

Brandl, Simon J., and Bellwood, David R. (2014) Pair-­formation in coral reef fishes: an ecological perspective. Oceanography and Marine Biology: an annual review, 52. pp. 1-80.

Neveux, N., Yuen, A.K.L., Jazrawi, C., He, Y., Magnusson, M., Haynes, B.S., Masters, A.F., Montoya, A., Paul, N.A., Maschmeyer, T., and de Nys, R. (2014) Pre- and post-harvest treatment of macroalgae to improve the quality of feedstock for hydrothermal liquefaction. Algal Research, 6 (Part A). pp. 22-31.

Vermeiren, Peter, and Sheaves, Marcus (2014) Predicting habitat associations of five intertidal crab species among estuaries. Estuarine, Coastal and Shelf Science , 149. pp. 133-142.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2014) Relationships between pair formation, site fidelity and sex in a coral reef cardinalfish. Behavioural Processes, 107. pp. 119-126.

Dinh Hoai, Truong , and Hutson, Kate S. (2014) Reproductive strategies of the insidious fish ectoparasite, Neobenedenia sp. (Capsalidae: Monogenea). PLoS ONE, 9 (9). e108801. pp. 1-7.

Sheaves, Marcus, Sheaves, Janine, Stegemann, Krista, and Molony, Brett (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Marine and Freshwater Research, 65 (2). pp. 114-123.

Davis, Ben, Baker, Ronald, and Sheaves, Marcus (2014) Seascape and metacommunity processes regulate fish assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 187-202.

Currey, Leanne M., Heupel, Michelle R., Simpfendorfer, Colin A., and Williams, Ashley J. (2014) Sedentary or mobile? Variability in space and depth use of an exploited coral reef fish. Marine Biology, 161 (9). pp. 2155-2166.

Lucon-Xiccato, Tyrone, Nati, Julie J.H., Blasco, Felipe Rocco, Johansen, Jacob L., Steffensen, John F., and Domenici, Paolo (2014) Severe hypoxia impairs lateralization in a marine teleost fish. Journal of Experimental Biology, 217 (23). pp. 4115-4118.

Heupel, Michelle R., Knip, Danielle M., Simpfendorfer, Colin A., and Dulvy, Nicholas K. (2014) Sizing up the ecological role of sharks as predators. Marine Ecology Progress Series, 495. pp. 291-298.

Chase, T.J., Pratchett, M.S., Walker, S.P.W., and Hoogenboom, M.O. (2014) Small-scale environmental variation influences whether coral-dwelling fish promote or impede coral growth. Oecologia, 176 (4). pp. 1009-1022.

Manassa, R.P., McCormick, M.I., Dixson, D.L., Ferrari, M.C.O., and Chivers, D.P. (2014) Social learning of predators by coral reef fish: does observer number influence acquisition of information? Behavioral Ecology and Sociobiology, 68 (8). pp. 1237-1244.

Pisapia, Chiara, and Pratchett, Morgan S. (2014) Spatial variation in background mortality among dominant coral taxa on Australia's Great Barrier Reef. PLoS ONE, 9 (6). e100969. pp. 1-11.

Carter, A.B., Russ, G.R., Tobin, A.J., Williams, A.J., Davies, C.R., and Mapstone, B.D. (2014) Spatial variation in the effects of size and age on reproductive dynamics of common coral trout Plectropomus leopardus. Journal of Fish Biology, 84 (4). pp. 1074-1098.

Storlie, Collin, Merino-Viteri, Andres, Phillips, Ben, VanDerWal, Jeremy, Welbergen, Justin, and Williams, Stephen (2014) Stepping inside the niche: microclimate data are critical for accurate assessment of species' vulnerability to climate change. Biology Letters, 10 (9). 20140576. pp. 1-4.

Chivers, Douglas P., Ramasamy, Ryan A., McCormick, Mark I., Watson, Sue-Ann, Siebeck, Ulrike E., and Ferrari, Maud C.O. (2014) Temporal constraints on predation risk assessment in a changing world. Science of the Total Environment, 500-501. pp. 332-338.

Weeks, Rebecca, Pressey, Robert L., Wilson, Joanne R., Knight, Maurice, Horigue, Vera, Abesamis, Rene A., Acosta, Renerio, and Jompa, Jamaluddin (2014) Ten things to get right for marine conservation planning in the Coral Triangle. F1000Research, 3. 91. pp. 1-20.

Cribb, Thomas H., Bott, Nathan J., Bray, Rodney A., McNamara, Marissa K.A., Miller, Terrence L., Nolan, Matthew J., and Cutmore, Scott C. (2014) Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and richness in coral reef fishes. International Journal for Parasitology, 44 (12). pp. 929-939.

Vucko, M.J., Poole, A.J., Carl, C., Sexton, B.A., Glenn, F.L., Whalan, S., and de Nys, R. (2014) Using textured PDMS to prevent settlement and enhance release of marine fouling organisms. Biofouling, 30 (1). pp. 1-16.

Whitty, Jeff M., Phillips, Nicole M., Thorburn, Dean C., Simpfendorfer, Colin A., Field, Iain, Peverell, Stirling C., and Morgan, David L. (2014) Utility of rostra in the identification of Australian sawfishes (Chondrichthyes: Pristidae). Aquatic Conservation: marine and freshwater ecosystems , 24 (6). pp. 791-804.

Garren, Melissa, Son, Kwangmin, Raina, Jean-Baptiste, Rusconi, Roberto, Menolascina, Filippo, Shapiro, Orr H., Tout, Jessica, Bourne, David G., Seymour, Justin R., and Stocker, Roman (2014) A bacterial pathogen uses dimethylsulfoniopropionate as a cue to target heat-stressed corals. ISME Journal, 8. pp. 999-1007.

Todd, Erica V., Blair, David, Georges, Arthur, Lukoschek, Vimoksalehi, and Jerry, Dean R. (2014) A biogeographical history and timeline for the evolution of Australian snapping turtles (Elseya: Chelidae) in Australia and New Guinea. Journal of Biogeography, 41 (5). pp. 905-918.

Fisher, Diana O., Johnson, Chris N., Lawes, Michael J., Fritz, Susanne A., McCallum, Hamish, Blomberg, Simon P., VanDerWal, Jeremy, Abbott, Brett, Frank, Anke, Legge, Sarah, Letnic, Mike, Thomas, Colette R., Fisher, Alaric, Gordon, Iain J., and Kutt, Alex (2014) The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography , 23 (2). pp. 181-190.

Kishore, Pranesh, Hunter, Justin, Zeng, Chaoshu, and Southgate, Paul C. (2014) The effects of different culture apparatuses and current velocities on byssus production by the black-lip pearl oyster, Pinctada margaritifera. Aquaculture, 434. pp. 74-77.

Cipresso Pereira, Pedro Henrique Cipresso, Moraes, Rodrigo Lima, dos Santos, Marcus Vinicius Bezerra, Lippi, Daniel Lino, Feitosa, João Lucas Leão, and UNSPECIFIED (2014) The influence of multiple factors upon reef fish abundance and species richness in a tropical coral complex. Ichthyological Research, 61 (4). pp. 375-384.

Abesamis, Rene A., Green, Alison, Russ, Garry R., and Jadloc, Claro Renato L. (2014) The intrinsic vulnerability to fishing of coral reef fishes and their differential recovery in fishery closures. Reviews in Fish Biology and Fisheries, 24 (4). pp. 1033-1063.

Heinrich, Dennis D.U., Rummer, Jodie L., Morash, Andrea J., Watson, Sue-Ann, Simpfendorfer, Colin, Heupel, Michelle R., and Munday, Philip L. (2014) A product of its environment: the epaulette shark (Hemiscyllium ocellatum) exhibits physiological tolerance to elevated environmental CO(2). Conservation Physiology, 2. pp. 1-12.

Vermeiren, Peter, and Sheaves, Marcus (2014) A remote photographic technique for high replication, large scale understanding of spatial distribution patterns of intertidal crabs. Hydrobiologia, 724 (1). pp. 79-89.

Kessel, S.T., Cooke, S.J., Heupel, M.R., Hussey, N.E., Simpfendorfer, C.A., Vagle, S., and Fisk, A.T. (2014) A review of detection range testing in aquatic passive acoustic telemetry studies. Reviews in Fish Biology and Fisheries, 24 (1). pp. 199-218.

Barnett, Leonie J., Miller, Terrence L., and Cribb, Thomas H. (2014) A review of the currently recognised opecoelid cercariae, including the identification and emergence ecology of Cercaria capricornia XII (Digenea: Opecoelidae) from Nassarius olivaceus (Gastropoda: Nassariidae) in Central Queensland, Australia. Parasitology International, 63 (5). pp. 670-682.

Cribb, Thomas H., Miller, Terrence L., Bray, Rodney A., and Cutmore, Scott C. (2014) The sexual adult of Cercaria praecox Walker, 1971 (Digenea: Fellodistomidae), with the proposal of Oceroma n. g. Systematic Parasitology, 88 (1). pp. 1-10.

Komyakova, Valeriya, Munday, Philip L., and Jones, Geoffrey P. (2013) Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities. PLoS ONE, 8 (12). e83178. pp. 1-12.

de Paula Silva, Pedro H., Paul, Nicholas A., de Nys, Rocky, and Mata, Leonardo (2013) Enhanced production of green tide algal biomass through additional carbon supply. PLoS ONE, 8 (12). e81164. pp. 1-7.

Hoey, A.S., Brandl, S.J., and Bellwood, D.R. (2013) Diet and cross-shelf distribution of rabbitfishes (f. Siganidae) on the northern Great Barrier Reef: implications for ecosystem function. Coral Reefs, 32 (4). pp. 973-984.

Dubois, Baptiste, Tomkins, Nigel W., Kinley, Robert D., Bai, Mei, Seymour, Scott, Paul, Nicholas A., and de Nys, Rocky (2013) Effect of tropical algae as additives on rumen in vitro gas production and fermentation characteristics. American Journal of Plant Sciences, 4 (12B). pp. 34-43.

Torda, G., Lundgren, P., Willis, B.L., and van Oppen, M.J.H. (2013) Genetic assignment of recruits reveals short- and long-distance larval dispersal in Pocillopora damicornis on the Great Barrier Reef. Molecular Ecology, 22 (23). pp. 5821-5834.

Jones, David B., Jerry, Dean R., Forêt, Sylvain, Konovalov, Dmitry A., and Zenger, Kyall R. (2013) Genome-wide SNP validation and mantle tissue transcriptome analysis in the silver-lipped pearl oyster, Pinctada maxima. Marine Biotechnology, 15 (6). pp. 647-658.

Jeans, Jennifer, Campbell, Douglas A., and Hoogenboom, Mia O. (2013) Increased reliance upon photosystem II repair following acclimation to high-light by coral-dinoflagellate symbioses. Photosynthesis Research, 118 (3). pp. 219-229.

Johansson, C.L., van de Leemput, I.A., Depczynski, M., Hoey, A.S., and Bellwood, D.R. (2013) Key herbivores reveal limited functional redundancy on inshore coral reefs. Coral Reefs, 32 (4). pp. 963-972.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) On minimizing assignment errors and the trade-off between false positives and negatives in parentage analysis. Molecular Ecology, 22 (23). pp. 5738-5742.

Munday, Philip L., Warner, Robert R., Monro, Keyne, Pandolfi, John M., and Marshall, Dustin J. (2013) Predicting evolutionary responses to climate change in the sea. Ecology Letters, 16 (12). pp. 1488-1500.

Mata, Leonardo, Wright, Emily, Owens, Leigh, Paul, Nicholas, and de Nys, Rocky (2013) Water-soluble natural products from seaweed have limited potential in controlling bacterial pathogens in fish aquaculture. Journal of Applied Phycology, 25 (6). pp. 1963-1973.

Welsh, J.Q., Goatley, C.H.R., and Bellwood, D.R. (2013) The ontogeny of home ranges: evidence from coral reef fishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1773). 20132066. pp. 1-7.

Roberts, David A., de Nys, Rocky, and Paul, Nicholas A. (2013) The effect of CO2 on algal growth in industrial waste water for bioenergy and bioremediation applications. PLoS ONE, 8 (11). e81631. pp. 1-12.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Raadsma, Herman W., and Zenger, Kyall R. (2013) A high-density SNP genetic linkage map for the silver-lipped pearl oyster, Pinctada maxima: a valuable resource for gene localisation and marker-assisted selection. BMC Genomics, 14. 810. pp. 1-18.

Curley, B.G., Glasby, T.M., Curley, A.J., Creese, R.G., and Kingsford, M.J. (2013) Enhanced numbers of two temperate reef fishes in a small, partial-take marine protected area related to spearfisher exclusion. Biological Conservation, 167. pp. 435-445.

Miller, Terrence L., Small, Hamish J., Peemoeller, Bhae-Jin, Gibbs, David A., and Shields, Jeffrey D. (2013) Experimental infections of Orchitophrya stellarum (Scuticociliata) in American blue crabs (Callinectes sapidus) and fiddler crabs (Uca minax). Journal of Invertebrate Pathology, 114 (3). pp. 346-355.

Connolly, N.M., and Pearson, R.G. (2013) Nutrient enrichment of a heterotrophic stream alters leaf litter nutritional quality and shredder physiological condition via the microbial pathway. Hydrobiologia, 718 (1). pp. 85-92.

Sato, Yui, Willis, Bette L., and Bourne, David G. (2013) Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals. Environmental Microbiology, 15 (11). pp. 2994-3007.

Wood, Apanie L., Butler, James R.A., Sheaves, Marcus, and Wani, Jacob (2013) Sport fisheries: opportunities and challenges for diversifying coastal livelihoods in the Pacific. Marine Policy, 42. pp. 305-314.

Raina, Jean-Baptiste, Tapiolas, Dianne M., Foret, Sylvain, Lutz, Adrian, Abrego, David, Ceh, Janja, Seneca, Francois O., Clode, Peta L., Bourne, David G., Willis, Bette L., and Motti, Cherie A. (2013) DMSP biosynthesis by an animal and its role in coral thermal stress response. Nature, 502 (7473). pp. 677-691.

Momigliano, Paolo, Sparrow, Leanne, Blair, David, and Heimann, Kirsten (2013) The diversity of Coolia spp. (Dinophyceae Ostreopsidaceae) in the central Great Barrier Reef region. PLoS ONE, 8 (10). e799278. pp. 1-11.

Walther, Benjamin D., Kingsford, Michael J., and McCulloch, Malcolm T. (2013) Environmental records from Great Barrier Reef corals: inshore versus offshore drivers. PLoS ONE, 8 (10). e77091. pp. 1-14.

Cantacessi, Cinzia, Seddon, Jennifer M., Miller, Terrence L., Leow, Chiuan Yee, Thomas, Laëtitia, Mason, Lyndel, Willis, Charlene, Walker, Giselle, Loukas, Alex, Gasser, Robin B., Jones, Malcolm K., and Hofmann, Andreas (2013) A genome-wide analysis of annexins from parasitic organisms and their vectors. Scientific Reports, 3. 2893. pp. 1-8.

Knight, Jon M., Griffin, Lachlan, Dale, Pat E.R., and Sheaves, Marcus (2013) Short-term dissolved oxygen patterns in sub-tropical mangroves. Estuarine, Coastal and Shelf Science, 131. pp. 290-296.

Lawton, Rebecca J., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2013) Algal bioremediation of waste waters from land-based aquaculture using Ulva: selecting target species and strains. PLoS ONE, 8 (10). e77344. pp. 1-10.

Manassa, R.P., Dixson, D.L., McCormick, M.I., and Chivers, D.P. (2013) Coral reef fish incorporate multiple sources of visual and chemical information to mediate predation risk. Animal Behaviour, 86 (4). pp. 717-722.

Chivers, Douglas P., Dixson, Danielle L., White, James R., McCormick, Mark I., and Ferrari, Maud C.O. (2013) Degradation of chemical alarm cues and assessment of risk throughout the day. Ecology and Evolution, 3 (11). pp. 3925-3934.

McCormick, Mark I., and Lönnstedt, Oona M. (2013) Degrading habitats and the effect of topographic complexity on risk assessment. Ecology and Evolution, 3 (12). pp. 4221-4229.

Miller, Terrence L., and Cribb, Thomas H. (2013) Dramatic phenotypic plasticity within species of Siphomutabilus n. g. (Digenea: Cryptogonimidae) from Indo-Pacific caesionines (Perciformes: Lutjanidae). Systematic Parasitology, 86 (2). pp. 101-112.

Brazenor, Alexander K., and Hutson, Kate S. (2013) Effect of temperature and salinity on egg hatching and description of the life cycle of Lernanthropus latis (Copepoda: Lernanthropidae) infecting barramundi, Lates calcarifer. Parasitology International, 62 (5). pp. 437-447.

Graham, Erin M., Baird, Andrew H., Willis, Bette L., and Connolly, Sean R. (2013) Effects of delayed settlement on post-settlement growth and survival of scleractinian coral larvae. Oecologia, 173 (2). pp. 431-438.

Nash, Kirsty L., Graham, Nicholas A.J., and Bellwood, David R. (2013) Fish foraging patterns, vulnerability to fishing, and implications for the management of ecosystem function across scale. Ecological Applications, 23 (7). pp. 1632-1644.

Grech, A., Bos, M., Brodie, J., Coles, R., Dale, A., Gilbert, R., Hamann, M., Marsh, H., Neil, K., Pressey, R.L., Rasheed, M.A., Sheaves, M., and Smith, A. (2013) Guiding principles for the improved governance of port and shipping impacts in the Great Barrier Reef. Marine Pollution Bulletin, 75 (1). pp. 8-20.

Miller, Gabrielle M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2013) Increased CO₂ stimulates reproduction in a coral reef fish. Global Change Biology, 19 (10). pp. 3037-3045.

Duchene, David, Klanten, Selma O., Munday, Philip L., Herler, Jürgen, and van Herwerden, Lynne (2013) Phylogenetic evidence for recent diversification of obligate coral-dwelling gobies compared with their host corals. Molecular Phylogenetics and Evolution, 69 (1). pp. 123-132.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2013) Strong intraspecific competition and habitat selectivity influence abundance of a coral-dwelling damselfish. Journal of Experimental Marine Biology and Ecology, 448. pp. 85-92.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Within-colony feeding selectivity by a corallivorous reef fish: foraging to maximize reward? Ecology and Evolution, 3 (12). pp. 4109-4118.

Price, Bronwyn, McAlpine, Clive A., Kutt, Alex S., Ward, Doug, Phinn, Stuart R., and Ludwig, John A. (2013) Disentangling how landscape spatial and temporal heterogeneity affects savanna birds. PLoS ONE, 8 (9). e74333. pp. 1-12.

Militz, Thane A., Southgate, Paul C., Carton, Alexander G., and Hutson, Kate S. (2013) Dietary supplementation of garlic (Allium sativum) to prevent monogenean infection in aquaculture. Aquaculture, 408-409. pp. 95-99.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2013) Pesticide contamination and phytotoxicity of sediment interstitial water to tropical benthic microalgae. Water Research, 47 (14). pp. 5211-5221.

Botté, Emmanuelle S., Smith-Keune, Carolyn, and Jerry, Dean R. (2013) Temperature: a prolonged confounding factor on cholinesterase activity in the tropical reef fish Acanthochromis polyacanthus. Aquatic Toxicology, 140-141. pp. 337-339.

Todd, Erica V., Blair, David, Farley, Sharon, Farrington, Lachlan, FitzSimmons, Nancy N., Georges, Arthur, Limpus, Colin J., and Jerry, Dean R. (2013) Contemporary genetic structure reflects historical drainage isolation in an Australian snapping turtle, Elseya albagula. Zoological Journal of the Linnean Society, 169 (1). pp. 200-214.

Silva Leal, Isabela Carolina, Cipresso Pereira, Pedro Herique, and de Araújo, Maria Elisabeth (2013) Coral reef fish association and behaviour on the fire coral Millepora spp. in north-east Brazil. Journal of the Marine Biological Association of the United Kingdom, 93 (6). pp. 1703-1711.

Haapkylä, J., Melbourne-Thomas, J., Flavell, M., and Willis, B.L. (2013) Disease outbreaks, bleaching and a cyclone drive changes in coral assemblages on an inshore reef of the Great Barrier Reef. Coral Reefs, 32 (3). pp. 815-824.

Boaden, A.E., and Kingsford, M.J. (2013) Distributions and habitat associations of the bridled monocle bream Scolopsis bilineatus (Nemipteridae): a demographic approach. Journal of Fish Biology, 83 (3). pp. 618-641.

Hodge, Jennifer R., Read, Charmaine I., Bellwood, David R., and van Herwerden, Lynne (2013) Evolution of sympatric species: a case study of the coral reef fish genus Pomacanthus (Pomacanthidae). Journal of Biogeography, 40 (9). pp. 1676-1687.

Brooker, R.M., Munday, P.L., Mcleod, I.M., and Jones, G.P. (2013) Habitat preferences of a corallivorous reef fish: predation risk versus food quality. Coral Reefs, 32 (3). pp. 613-622.

Baker, Ronald, Fry, Brian, Rozas, Lawrence P., and Minello, Thomas J. (2013) Hydrodynamic regulation of salt marsh contributions to aquatic food webs. Marine Ecology Progress Series, 490. pp. 37-52.

Montanari, Stefano R., Gardner, Michael G., Hobbs, Jean-Paul A., Pratchett, Morgan S., Bay, Line K., and van Herwerden, Lynne (2013) Isolation and characterization of twenty microsatellite markers for the study of hybridization in butterflyfish of the genus Chaetodon. Conservation Genetics Resources, 5 (3). pp. 783-786.

Brandl, S.J., and Bellwood, D.R. (2013) Morphology, sociality, and ecology: can morphology predict pairing behavior in coral reef fishes? Coral Reefs, 32 (3). pp. 835-846.

Taylor, B.M., and Mills, J.S. (2013) Movement and spawning migration patterns suggest small marine reserves can offer adequate protection for exploited emperorfishes. Coral Reefs, 32 (4). pp. 1077-1087.

Horne, John B., Momigliano, Paolo, van Herwerden, Lynne, and Newman, Stephen J. (2013) Murky waters: searching for structure in genetically depauperate blue threadfin populations of Western Australia. Fisheries Research, 146. pp. 1-6.

Newton, James R., Zenger, Kyall R., and Jerry, Dean R. (2013) Next-generation transcriptome profiling reveals insights into genetic factors contributing to growth differences and temperature adaptation in Australian populations of barramundi (Lates calcarifer). Marine Genomics, 11. pp. 45-52.

Lönnstedt, Oona M., Munday, Philip L., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2013) Ocean acidification and responses to predators: can sensory redundancy reduce the apparent impacts of elevated CO2 on fish? Ecology and Evolution, 3 (10). pp. 3565-3575.

Johansen, J.L., and Jones, G.P. (2013) Sediment-induced turbidity impairs foraging performance and prey choice of planktivorous coral reef fishes. Ecological Applications, 23 (6). pp. 1504-1517.

Fulton, C.J., Binning, S.A., Wainwright, P.C., and Bellwood, D.R. (2013) Wave-induced abiotic stress shapes phenotypic diversity in a coral reef fish across a geographical cline. Coral Reefs, 32 (3). pp. 685-689.

Shaw, Emily C., Munday, Philip L., and McNeil, Ben I. (2013) The role of CO₂ variability and exposure time for biological impacts of ocean acidification. Geophysical Research Letters, 40 (17). pp. 4685-4688.

Paris, Claire B., Atema, Jelle, Irisson, Jean-Olivier, Kingsford, Michael, Gerlach, Gabriele, and Guigand, Cedric M. (2013) Reef odor: a wake up call for navigation in reef fish larvae. PLoS ONE, 8 (8). e72808. pp. 1-8.

Leduc, Antoine O.H.C., Munday, Philip L., Brown, Grant E., and Ferrari, Maud C.O, (2013) Effects of acidification on olfactory-mediated behaviour in freshwater and marine ecosystems: a synthesis. Philosophical Transactions of the Royal Society B: Biological Sciences, 368 (1627). 20120447 . pp. 1-14.

Cowman, Peter F., and Bellwood, David R. (2013) Vicariance across major marine biogeographic barriers: temporal concordance and the relative intensity of hard versus soft barriers. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1768). 20131541. pp. 1-8.

Cutmore, Scott C., Miller, Terrence L., Curran, Stephen S., Bennett, Michael B., and Cribb, Thomas H. (2013) Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112 (8). pp. 3063-3074.

Loughnan, Shannon R., Domingos, Jose A., Smith-Keune, Carolyn, Forrester, Justin P., Jerry, Dean R., Beheregaray, Luciano B., and Robinson, Nicholas A. (2013) Broodstock contribution after mass spawning and size grading in barramundi (Lates calcarifer, Bloch). Aquaculture, 404-405. pp. 139-149.

Munday, Philip L., Pratchett, Morgan S., Dixson, Danielle L., Donelson, Jennifer M., Endo, Geoff G.K., Reynolds, Adam D., and Knuckey, Richard (2013) Elevated CO2 affects the behavior of an ecologically and economically important coral reef fish. Marine Biology, 160 (8). pp. 2137-2144.

Blowes, Shane A., Pratchett, Morgan S., and Connolly, Sean R. (2013) Heterospecific aggression and dominance in a guild of coral-feeding fishes: the roles of dietary ecology and phylogeny. American Naturalist, 182 (2). pp. 157-168.

Richards, Zoe T., Syms, Craig, Wallace, Carden C., Muir, Paul R., and Willis, Bette L. (2013) Multiple occupancy–abundance patterns in staghorn coral communities. Diversity and Distributions, 19 (8). pp. 884-895.

Bourne, David G., van der Zee, Marc J.J., Botté, Emmanuelle S., and Sato, Yui (2013) Sulfur-oxidizing bacterial populations within cyanobacterial dominated coral disease lesions. Environmental Microbiology Reports, 5 (4). pp. 518-524.

Miller, T.L., and Adlard, R.D. (2013) Unicapsula species (Myxosporea: Trilosporidae) of Australian marine fishes, including the description of Unicapsula andersenae n. sp. in five teleost families off Queensland, Australia. Parasitology Research, 112 (8). pp. 2945-2957.

Yong, R.Q-Y., Cutmore, S.C., Miller, T.L., Adlard, R.D., and Cribb, T.H. (2013) The ghost of parasites past: eggs of the blood fluke Cardicola chaetodontis (Aporocotylidae) trapped in the heart and gills of butterflyfishes (Perciformes: Chaetodontidae) of the Great Barrier Reef. Parasitology, 140 (9). pp. 1186-1194.

Feary, David A., Burt, John A., Bauman, Andrew G., Al Hazeem, Shaker, Abdel-Moati, Mohamed A., Al-Khalifa, Khalifa A., Anderson, Donald M., Amos, Carl, Baker, Andrew, Bartholomew, Aaron, Bento, Rita, Cavalcante, Geórgenes H., Chen, Chaolun Allen, Coles, Steve L., Dab, Koosha, Fowler, Ashley M., George, David, Grandcourt, Edwin, Hill, Ross, John, David M., Jones, David A., Keshavmurthy, Shashank, Mahmoud, Huda, Tapeh, Mahdi Moradi Och, Mostafavi, Pargol Ghavam, Naser, Humood, Pichon, Michel, Purkis, Sam, Riegl, Bernhard, Samimi-Namin, Kaveh, Sheppard, Charles, Samiei, Jahangir Vajed, Voolstra, Christian R., and Wiedenmann, Joerg (2013) Critical research needs for identifying future changes in Gulf coral reef ecosystems. Marine Pollution Bulletin, 72 (2). pp. 406-416.

Stephens, Evan, de Nys, Rocky, Ross, Ian L., and Hankamer, Ben (2013) Algae fuels as an alternative to petroleum. Journal of Petroleum & Environmental Biotechnology, 4 (4). 1000148. pp. 1-7.

Leahy, Susannah M., Kingsford, Michael J., and Steinberg, Craig R. (2013) Do clouds save the Great Barrier Reef? Satellite imagery elucidates the cloud-SST relationship at the local scale. PLoS ONE, 8 (7). e70400. pp. 1-12.

Wen, Colin Kuo-Chang, Chen, Kao-Song, Hsieh, Hernyi Justin, Hsu, Chia-Min, and Chen, Chaolun Allen (2013) High coral cover and subsequent high fish richness on mature breakwaters in Taiwan. Marine Pollution Bulletin, 72 (1). pp. 55-63.

Bott, Nathan J., Miller, Terrence L., and Cribb, Thomas H. (2013) Bucephalidae (Platyhelminthes: Digenea) of Plectropomus (Serranidae: Epinephelinae) in the tropical Pacific. Parasitology Research, 112 (7). pp. 2561-2584.

Hughes, Terry P., Connolly, Sean R., and Keith, Sally A. (2013) Geographic ranges of reef corals (Cnidaria: Anthozoa: Scleractinia) in the Indo-Pacific. Ecology, 94 (7). p. 1659.

Domingos, Jose A., Smith-Keune, Carolyn, Robinson, Nicholas, Loughnan, Shannon, Harrison, Paul, and Jerry, Dean R. (2013) Heritability of harvest growth traits and genotype–environment interactions in barramundi, Lates calcarifer (Bloch). Aquaculture, 402-403. pp. 66-75.

Mitchell, Matthew D., and McCormick, Mark I. (2013) Ontogenetic differences in chemical alarm cue production determine antipredator responses and learned predator recognition. Behavioural Ecology and Sociobiology, 67 (7). pp. 1123-1129.

Howells, Emily J., Willis, Bette L., Bay, Line K., and van Oppen, Madeleine J.H. (2013) Spatial and temporal genetic structure of Symbiodinium populations within a common reef-building coral on the Great Barrier Reef. Molecular Ecology, 22 (14). pp. 3693-3708.

White, James R., Meekan, Mark G., McCormick, Mark I., and Ferrari, Maud C.O. (2013) A comparison of field measures of boldness and their relationships to survival in young fish. PLoS ONE, 8 (7). e68900. pp. 1-11.

Underwood, Avril H., Taylor, Sandra, and Seymour, Jamie E. (2013) Range extension of the Cubozoan, Tripedalia binata Moore (Cnideria: Carybdeida: Carybdeidae) from far north Queensland, Australia. Memoirs of the Queensland Museum - Nature, 56 (2). pp. 607-614.

Mouritsen, Henrik, Atema, Jelle, Kingsford, Michael J., and Gerlach, Gabriele (2013) Sun compass orientation helps coral reef fish larvae return to their natal reef. PLoS ONE, 8 (6). e66039. pp. 1-16.

Galaiduk, Ronen, Figueira, Will F., Kingsford, Michael J., and Curley, Belinda G. (2013) Factors driving the biogeographic distribution of two temperate Australian damselfishes and ramifications for range shifts. Marine Ecology Progress Series, 484. pp. 189-202.

DiBattista, Joseph D., Berumen, Michael L., Gaither, Michelle R., Rocha, Luiz A., Eble, Jeff A., Choat, J. Howard, Craig, Matthew, Skillings, Derek J., and Bowen, Brian W. (2013) After continents divide: comparative phylogeography of reef fishes from the Red Sea and Indian Ocean. Journal of Biogeography, 40 (6). pp. 1170-1181.

Petersen, Elizabeth H., Jones, Clive, and Priyambodo, Bayu (2013) Bioeconomics of spiny lobster farming in Indonesia. Asian Journal of Agriculture and Development, 10 (1). pp. 25-39.

Frost, Ashley J., Thompson, Jack S., Smith, Charlotte, Burton, Hannah C., Davis, Ben, Watts, Phillip C., and Sneddon, Lynne U. (2013) Environmental change alters personality in the rainbow trout, Oncorhynchus mykiss. Animal Behaviour, 85 (6). pp. 1199-1207.

Sadovy de Mitcheson, Yvonne, Craig, Matthew T., Bertoncini, Athila A., Carpenter, Kent E., Cheung, William W.L., Choat, John H., Cornish, Andrew S., Fennessy, Sean T., Ferreira, Beatrice, Heemstra, Philip C., Liu, Min, Myers, Robert F., Pollard, David A., Rhodes, Kevin L., Rocha, Luiz A., Russell, Barry C., Samoilys, Melita A., and Sanciangco, Jonnell (2013) Fishing groupers towards extinction: a global assessment of threats and extinction risks in a billion dollar fishery. Fish and Fisheries, 14 (2). pp. 119-136.

van der Meer, Martin H., Gardner, Michael G., Berumen, Michael L., Hobbs, Jean-Paul A., and Van Herwerden, Lynne (2013) Identification of seventeen microsatellite loci for conservation genetic studies of the endemic wrasse Coris bulbifrons. Conservation Genetics Resources, 5 (2). pp. 363-366.

van der Meer, Martin H., Horne, John B., Gardner, Michael G., Hobbs, Jean-Paul A., Pratchett, Morgan, and van Herwerden, Lynne (2013) Limited contemporary gene flow and high self-replenishment drives peripheral isolation in an endemic coral reef fish. Ecology and Evolution, 3 (6). pp. 1653-1666.

Brandl, S.J., and Bellwood, D.R. (2013) Pair formation in the herbivorous rabbitfish Siganus doliatus. Journal of Fish Biology, 82 (6). pp. 2031-2044.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Prey selectivity affects reproductive success of a corallivorous reef fish. Oecologia, 172 (2). pp. 409-416.

Graham, E.M., Baird, A.H., Connolly, S.R., Sewell, M.A., and Willis, B.L. (2013) Rapid declines in metabolism explain extended coral larval longevity. Coral Reefs, 32 (2). pp. 539-549.

Wenger, A.S., McCormick, M.I., McLeod, I.M., and Jones, G.P. (2013) Suspended sediment alters predator–prey interactions between two coral reef fishes. Coral Reefs, 32 (2). pp. 369-374.

Kramer, M.J., Bellwood, O., and Bellwood, D.R. (2013) The trophic importance of algal turfs for coral reef fishes: the crustacean link. Coral Reefs, 32 (2). pp. 575-583.

Mouillot, David, Bellwood, David R., Baraloto, Christopher, Chave, Jerome, Galzin, Rene, Harmelin-Vivien, Mireille, Kulbicki, Michel, Lavergne, Sebastien, Lavorel, Sandra, Mouquet, Nicolas, Paine, C.E. Timothy, Renaud, Julien, and Thuiller, Wilfried (2013) Rare species support vulnerable functions in high-diversity ecosystems. PLoS Biology, 11 (5). e1001569. pp. 1-11.

Lawton, Rebecca J., de Nys, Rocky, and Paul, Nicholas (2013) Selecting reliable and robust freshwater macroalgae for biomass applications. PLoS ONE, 8 (5). e64168. pp. 1-7.

Wenger, Amelia S., and McCormick, Mark I. (2013) Determining trigger values of suspended sediment for behavioral changes in a coral reef fish. Marine Pollution Bulletin, 70 (1-2). pp. 73-80.

Tapiolas, Dianne M., Raina, Jean-Baptiste, Lutz, Adrian, Willis, Bette L., and Motti, Cherie A. (2013) Direct measurement of dimethylsulfoniopropionate (DMSP) in reef-building corals using quantitative nuclear magnetic resonance (qNMR) spectroscopy. Journal of Experimental Marine Biology and Ecology, 443. pp. 85-89.

Howells, Emily J., Berkelmans, Ray, van Oppen, Madeleine J.H., Willis, Bette L., and Bay, Line K. (2013) Historical thermal regimes define limits to coral acclimatization. Ecology, 94 (5). pp. 1078-1088.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2013) Olfactory discrimination in juvenile coral reef fishes: response to conspecifics and corals. Journal of Experimental Marine Biology and Ecology, 443. pp. 21-26.

von Alvensleben, Nicolas, Stookey, Katherine, Magnusson, Marie, and Heimann, Kirsten (2013) Salinity tolerance of Picochlorum atomus and the use of salinity for contamination control by the freshwater cyanobacterium Pseudanabaena limnetica. PLoS ONE, 8 (5). e63569. pp. 1-12.

Udyawer, Vinay, Chin, Andrew, Knip, Danielle M., Simpfendorfer, Colin A., and Heupel, Michelle R. (2013) Variable response of coastal sharks to severe tropical storms: environmental cues and changes in space use. Marine Ecology Progress Series, 480. pp. 171-183.

Almany, Glenn R., Hamilton, Richard J., Bode, Michael, Matawai, Manuai, Potuku, Tapas, Saenz-Agudelo, Pablo, Planes, Serge, Berumen, Michael L., Rhodes, Kevin L., Thorrold, Simon R., Russ, Garry R., and Jones, Geoffrey P. (2013) Dispersal of grouper larvae drives local resource sharing in a coral reef fishery. Current Biology, 23 (7). pp. 626-630.

Pereira, P.H.C., and Ferreira, B.P. (2013) Effects of life phase and schooling patterns on the foraging behaviour of coral-reef fishes from the genus Haemulon. Journal of Fish Biology, 82 (4). pp. 1226-1238.

Mitchell, Matthew D., McCormick, Mark I., Chivers, Douglas P., and Ferrari, Maud C.O. (2013) Generalization of learned predator recognition in coral reef ecosystems: how cautious are damselfish? Functional Ecology, 27 (2). pp. 299-304.

Rhodes, K.L., Taylor, B.M., Wichilmel, C.B., Joseph, E., Hamilton, R.J., and Almany, G.R. (2013) Reproductive biology of squaretail coralgrouper Plectropomus areolatus using age-based techniques. Journal of Fish Biology, 82 (4). pp. 1333-1350.

Roy, Alexandra-Sophie, Frisch, Ashley J., Syms, Craig, Thorrold, Simon R., and Jones, Geoffrey P. (2013) Retention of a transgenerational marker (137Barium) in tissues of adult female anemonefish and assessment of physiological stress. Environmental Biology of Fishes, 96 (4). pp. 459-466.

Manassa, R.P., and McCormick, M.I. (2013) Social learning improves survivorship at a life-history transition. Oecologia, 171 (4). pp. 845-852.

Pratchett, M.S., Graham, N.A.J., and Cole, A.J. (2013) Specialist corallivores dominate butterflyfish assemblages in coral-dominated reef habitats. Journal of Fish Biology, 82 (4). pp. 1177-1191.

Johansson, C.L., Bellwood, D.R., Depczynski, M., and Hoey, A.S. (2013) The distribution of the sea urchin Echinometra mathaei (de Blainville) and its predators on Ningaloo Reef, Western Australia: the implications for top-down control in an intact reef system. Journal of Experimental Marine Biology and Ecology, 442. pp. 39-46.

Hopf, Jessica, and Kingsford, Michael (2013) The utility of statoliths and bell size to elucidate age and condition of a scyphomedusa (Cassiopea sp.). Marine Biology, 160 (4). pp. 951-960.

Seymour, Scott, Paul, Nicholas A., Dworjanyn, Symon A., and de Nys, Rocky (2013) Feeding preference and performance in the tropical sea urchin Tripneustes gratilla. Aquaculture, 400-401. pp. 6-13.

Castine, Sarah A., Paul, Nicholas A., Magnusson, Marie, Bird, Michael I., and de Nys, Rocky (2013) Algal bioproducts derived from suspended solids in intensive land-based aquaculture. Bioresource Technology, 131. pp. 113-120.

Pearson, R.G., Godfrey, P.C., Arthington, A.H., Wallace, J., Karim, F., and Ellison, M. (2013) Biophysical status of remnant freshwater floodplain lagoons in the Great Barrier Reef catchment: a challenge for assessment and monitoring. Marine and Freshwater Research, 64 (3). pp. 208-222.

Dao, Hoc Tan, Todd, Erica V., and Jerry, Dean R. (2013) Characterization of polymorphic microsatellite loci for the spiny lobster Panulirus spp. and their utility to be applied to other Panulirus lobsters. Conservation Genetics Resources, 5 (1). pp. 43-46.

Currey, L.M., Williams, A.J., Mapstone, B.D., Davies, C.R., Carlos, G., Welch, D.J., Simpfendorfer, C.A., Ballagh, A.C., Penny, A.L., Grandecourt, E.M., Mapleston, A., Wiebkin, A.S., and Bean, K. (2013) Comparative biology of tropical Lethrinus species (Emperors): challenges for multi-species management. Journal of Fish Biology, 82 (3). pp. 764-788.

Garda, Adrian A., Wiederhecker, Helga C., Gainsbury, Allison M., Costa, Gabriel C., Pyron, Alexander, Calazans Vieira, Gustavo H., Werneck, Fernanda P., and Colli, Guarino R. (2013) Microhabitat variation explains local-scale distribution of terrestrial Amazonian lizards in Rondônia, Western Brazil. Biotropica, 45 (2). pp. 245-252.

Inkster-Draper, Tamara E., Sheaves, Marcus, Johnson, Christopher N., and Robson, Simon K.A. (2013) Prescribed fire in eucalypt woodlands: immediate effects on a microbat community of northern Australia. Wildlife Research, 40 (1). pp. 70-76.

Pereira, Pedro H.C., Feitosa, João L.L., Medeiros, Diego V., and Ferreira, Beatrice P. (2013) Reef fishes foraging facilitation behavior: increasing the access to a food resource. Acta Ethologica, 16 (1). pp. 53-56.

King, Peter C., Poole, Andrew J. , Horne, Susan, de Nys, Rocky, Gulizia, Stefan, and Jahedi, Mahnaz Z. (2013) Embedment of copper particles into polymers by cold spray. Surface and Coatings Technology, 216. pp. 60-67.

Roberts, David A., Birchenough, Silvana N.R., Lewis, Ceri, Sanders, Matthew B., Bolam, Thi, and Sheahan, Dave (2013) Ocean acidification increases the toxicity of contaminated sediments. Global Change Biology, 19 (2). pp. 340-351.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) Relative accuracy of three common methods of parentage analysis in natural populations. Molecular Ecology, 22 (4). pp. 1158-1170.

Thibaut, Loïc M., and Connolly, Sean R. (2013) Understanding diversity–stability relationships: towards a unified model of portfolio effects. Ecology Letters, 16 (2). pp. 140-150.

Cowman, Peter F., and Bellwood, David R. (2013) The historical biogeography of coral reef fishes: global patterns of origination and dispersal. Journal of Biogeography, 40 (2). pp. 209-224.

Sheaves, Marcus (2013) Mangrove fish assemblages and ecological equivalence: reply to Castellanos-Galindo & Krumme (2013). Marine Ecology Progress Series, 474. pp. 303-304.

Fulton, Christopher J., Johansen, Jacob L., and Steffensen, John F. (2013) Energetic extremes in aquatic locomotion by coral reef fishes. PLoS ONE, 8 (1). e54033. pp. 1-6.

Busilacchi, Sara, Russ, Garry R., Williams, Ashley J., Sutton, Stephen G., and Begg, Gavin A. (2013) The role of subsistence fishing in the hybrid economy of an indigenous community. Marine Policy, 37. pp. 183-191.

Verhaert, Vera, Covaci, Adrian, Bouillon, Steven, Abrantes, Katya, Musibono, Dieudonné, Bervoets, Lieven, Verheyen, Erik, and Blust, Ronny (2013) Baseline levels and trophic transfer of persistent organic pollutants in sediments and biota from the Congo River Basin (DR Congo). Environment International, 59. pp. 290-302.

McLeod, Ian M., Rummer, Jodie L., Clark, Timothy D., Jones, Geoffrey P., McCormick, Mark I., Wenger, Amelia S., and Munday, Philip L. (2013) Climate change and the performance of larval coral reef fishes: the interaction between temperature and food availability. Conservation Physiology, 1 (1). pp. 1-12.

Vucko, M.J., Poole , A.J., Sexton , B.A., Glenn, F.L., Carl, C., Whalan, S., and de Nys, R. (2013) Combining a photocatalyst with microtopography to develop effective antifouling materials. Biofouling, 29 (7). pp. 751-762.

Huerlimann, Roger, and Heimann, Kirsten (2013) Comprehensive guide to acetyl-carboxylases in algae. Critical reviews in Biotechnology, 33 (1). pp. 49-65.

Chaves, L.T.C., Pereira, P.H.C., and Feitosa, J.L.L. (2013) Coral reef fish association with macroalgal beds on a tropical reef system in North-eastern Brazil. Marine and Freshwater Research, 64 (12). pp. 1101-1111.

Nash, Kirsty L., Graham, Nicholas A.J., Wilson, Shaun K., and Bellwood, David R. (2013) Cross-scale habitat structure drives fish body size distributions on coral reefs. Ecosystems, 16 (3). pp. 478-490.

Pollock, F.J., Katz, S.M., Bourne, D.G., and Willis, B.L. (2013) Cymo melanodactylus crabs slow progression of white syndrome lesions on corals. Coral Reefs, 32 (1). pp. 43-48.

Lönnstedt, Oona I., McCormick, Mark I., and Chivers, Douglas P. (2013) Degraded environments alter prey risk assessment. Ecology and Evolution, 3 (1). pp. 38-47.

Jones, B., Fuller, S., and Carton, A.G. (2013) Earthy-muddy tainting of cultured barramundi linked to geosmin in tropical northern Australia. Aquaculture Environment Interactions , 3 (2). pp. 117-124.

Jones, G.P. (2013) Ecology of rocky reef fish of northeastern New Zealand: 50 years on. New Zealand Journal of Marine and Freshwater Research, 47 (3). pp. 334-359.

Yarmohammadi, M., Shabani, A., Pourkazemi, M., Soltanloo, H., Imanpour, M.R., Ramezanpour, S., Smith-Keune, C., and Jerry, D.R. (2013) Effects of starvation and re-feeding on compensatory growth performance, plasma metabolites and IGF-I gene expression of Persian sturgeon (Acipenser persicus, Borodin 1897). Iranian Journal of Fisheries Sciences, 12 (2). pp. 465-483.

Allan, Bridie J.M., Domenici, Paolo, McCormick, Mark I., Watson, Sue-Ann, and Munday, Philip L. (2013) Elevated CO2 affects predator-prey interactions through altered performance. PLoS One, 8 (3). e58520. pp. 1-7.

Rummer, Jodie L., Stecyk, Jonathan A.W., Couturier, Christine, Watson, Sue-Ann, Nilsson, Göran E., and Munday, Philip L. (2013) Elevated CO₂ enhances aerobic scope of a coral reef fish. Conservation Physiology, 1 (1). pp. 1-7.

Kramer, M.J., Bellwood, D.R., and Bellwood, O. (2013) Emergent fauna from hard surfaces on the Great Barrier Reef, Australia. Marine and Freshwater Research, 64 (8). pp. 687-691.

Grenchik, M.K., Donelson, J.M., and Munday, P.L. (2013) Evidence for developmental thermal acclimation in the damselfish, Pomacentrus moluccensis. Coral Reefs, 32 (1). pp. 85-90.

Parravicini, V., Kulbicki, M., Bellwood, D.R., Friedlander, A.M., Arias-Gonzalez, J.E., Chabanet, P., Floeter, S.R, Myers, R., Vigliola, L., D'Agata, S., and Mouillot, D. (2013) Global patterns and predictors of tropical reef fish species richness. Ecography, 36 (12). pp. 1254-1262.

Hobbs, Jean-Paul, van Herwerden, Lynne, Jerry, Dean R., Jones, Geoffrey P., and Munday, Philip L. (2013) High genetic diversity in geographically remote populations of endemic and widespread coral reef angelfishes (genus: Centropyge). Diversity, 5 (1). pp. 39-50.

Morgan, Jess A.T., Macbeth, Michael, Broderick, Damien, Whatmore, Paul, Street, Raewyn, Welch, David J., and Ovenden, Jennifer R. (2013) Hybridisation, paternal leakage and mitochondrial DNA linearization in three anomalous fish (Scombridae). Mitochondrion, 13 (6). pp. 852-861.

Collins, Geoffrey M., Clark, Timothy D., Rummer, Jodie L., and Carton, Alexander G. (2013) Hypoxia tolerance is conserved across genetically distinct sub-populations of an iconic, tropical Australian teleost (Lates calcarifer). Conservation Physiology, 1 (1). pp. 1-9.

Islam, Muhammad Aminul, Ayoko, Godwin A., Brown, Richard, Stuart, Doug, and Heimann, Kirsten (2013) Influence of fatty acid structure on fuel properties of algae derived biodiesel. Procedia Engineering, 56. pp. 591-596.

Horne, J.B., and van Herwerden, L. (2013) Long-term panmixia in a cosmopolitan Indo-Pacific coral reef fish and a nebulous genetic boundary with its broadly sympatric sister species. Journal of Evolutionary Biology, 26 (4). pp. 783-799.

Islam, Muhammad Aminul, Magnusson, Marie, Brown, Richard J., Ayoko, Godwin A., Nabi, Md. Nurun, and Heimann, Kirsten (2013) Microalgal species selection for biodiesel production based on fuel properties derived from fatty acid profiles. Energies, 6 (11). pp. 5676-5702.

Stride, M.C., Polkinghorne, A., Miller, T.L., Groff, J.M., LaPatra, S.E., and Nowak, B.F. (2013) Molecular characterization of "Candidatus Parilichlamydia carangidicola," a novel Chlamydia-like epitheliocystis agent in Yellowtail Kingfish, Seriola lalandi (Valenciennes), and the proposal of a new family, "Candidatus Parilichlamydiaceae" fam. nov. (Order Chlamydiales). Applied and Environmental Microbiology, 79 (5). pp. 1590-1597.

Stride, M.C., Polkinghorne, A., Miller, T.L., and Nowak, B.F. (2013) Molecular characterization of "Candidatus Similichlamydia latridicola" gen. nov., sp. nov. (Chlamydiales: "Candidatus Parilichlamydiaceae"), a novel Chlamydia-like epitheliocystis agent in the Striped Trumpeter, Latris lineata (Forster). Applied and Environmental Microbiology, 79 (16). pp. 4914-4920.

Fox, R.J., and Bellwood, D.R. (2013) Niche partitioning of feeding microhabitats produces a unique function for herbivorous rabbitfishes (Perciformes, Siganidae) on coral reefs. Coral Reefs, 32 (1). pp. 13-23.

Zeng, Chaoshu, and Romano, Nicholas (2013) Nitrogenous wastes: often overlooked pollutants in aquatic environments. Journal of Marine Science Research and Development, 3 (3). 1000e118. p. 1.

Sheaves, Marcus, Johnston, Ross, Johnson, Ashlee, Baker, Ronald, and Connolly, Rod M. (2013) Nursery function drives temporal patterns in fish assemblage structure in four tropical estuaries. Estuaries and Coasts, 36 (5). pp. 893-905.

Horne, John B., van Herwerden, Lynne, Abellana, Sheena, and Mcilwain, Jennifer L. (2013) Observations of migrant exchange and mixing in a coral reef fish metapopulation link scales of marine population connectivity. Journal of Heredity, 104 (4). pp. 532-546.

McCormick, Mark I., Watson, Sue-Ann, and Munday, Philip L. (2013) Ocean acidification reverses competition for space as habitats degrade. Scientific Reports, 3. 3280. pp. 1-6.

Veilleux, Heather D., Van Herwerden, Lynne, Cole, Nicholas J., Don, Emily K., De Santis, Christian, Dixson, Danielle L., Wenger, Amelia S., and Munday, Philip L. (2013) Otx2 expression and implications for olfactory imprinting in the anemonefish, Amphiprion percula. Biology Open, 2 (9). 24143277. pp. 907-915.

Kingsford, Michael J. (2013) Paradigms for planktonic assemblages: 50 years of contributions from the Leigh Marine Laboratory, Northland, New Zealand. New Zealand Journal of Marine and Freshwater Research, 47 (3). pp. 294-312.

Neaves, Linda E., Zenger, Kyall R., Prince, Robert I.T., and Eldridge, Mark D.B. (2013) Paternally inherited genetic markers reveal new insights into genetic structuring within Macropus fuliginosus and hybridisation with sympatric Macropus giganteus. Australian Journal of Zoology, 61 (1). pp. 58-68.

Vucko, M.J., King, P.C, Poole, A.J., Jahedi, M.Z, and De Nys, R. (2013) Polyurethane seismic streamer skins: an application of cold spray metal embedment. Biofouling, 29 (1). pp. 1-9.

Chin, A., Tobin, A.J., Heupel, M.R., and Simpfendorfer, C.A. (2013) Population structure and residency patterns of the blacktip reef shark Carcharhinus melanopterus in turbid coastal environments. Journal of Fish Biology, 82 (4). pp. 1192-1210.

Lonnstedt, Oona M., McCormick, Mark I., and Chivers, Douglas P. (2013) Predator-induced changes in the growth of eyes and false eyespots. Scientific Reports, 3. 2259. pp. 1-5.

Busilacchi, Sara, Russ, Garry R., Williams, Ashley J., Begg, Gavin A., and Sutton, Stephen G. (2013) Quantifying changes in the subsistence reef fishery of indigenous communities in Torres Strait, Australia. Fisheries Research, 137. pp. 50-58.

Wen, Colin K.C., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., Mannering, Thomas D., Evans, Richard D., Leis, Jeffrey M., Srinivasan, Maya, and Jones, Geoffrey P. (2013) Recruitment hotspots boost the effectiveness of no-take marine reserves. Biological Conservation, 166. pp. 124-131.

Ban, S.S., Graham, N.A.J., and Connolly, S.R. (2013) Relationships between temperature, bleaching and white syndrome on the Great Barrier Reef. Coral Reefs, 32 (1). pp. 1-12.

Hassell, Nikki S., Williamson, David H., Evans, Richard D., and Russ, Garry R. (2013) Reliability of non-expert observer estimates of the magnitude of marine reserve effects. Coastal Management, 41 (4). pp. 361-380.

Sheaves, M., and Molony, B. (2013) Reproductive periodicity of the sparid, Acanthopagrus pacificus, on a hierarchy of temporal scales. Journal of Fish Biology, 82 (2). pp. 538-554.

Chick, Rowan C., Worthington, Duncan G., and Kingsford, Michael J. (2013) Restocking depleted wild stocks—long-term survival and impact of released blacklip abalone (Haliotis rubra) on depleted wild populations in New South Wales, Australia. Reviews in Fisheries Science, 21 (3-4). pp. 321-340.

Torda, G., Lundgren, P., Willis, B. L., and van Oppen, M.J.H. (2013) Revisiting the connectivity puzzle of the common coral Pocillopora damicornis. Molecular Ecology, 22 (23). pp. 5805-5820.

Wen, Colin K.C., Pratchett, Morgan S., Almany, Glenn R., and Jones, Geoffrey P. (2013) Role of prey availability in microhabitat preferences of juvenile coral trout (Plectropomus: Serranidae). Journal of Experimental Marine Biology and Ecology, 443. pp. 39-45.

Chan, Neil C.S., and Connolly, Sean R. (2013) Sensitivity of coral calcification to ocean acidification: a meta-analysis. Global Change Biology, 19 (1). pp. 282-290.

Manassa, R.P., McCormick, M.I., Chivers, D.P., and Ferrari, M.C.O. (2013) Social learning of predators in the dark: understanding the role of visual, chemical and mechanical information. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1765). 20130720. pp. 1-8.

Manassa, R.P., McCormick, M.I., and Chivers, D.P. (2013) Socially acquired predator recognition in complex ecosystems. Behavioral Ecology and Sociobiology, 67 (7). pp. 1033-1040.

Madin, J.S., Dell, A.I., Madin, E.M.P., and Nash, M.C. (2013) Spatial variation in mechanical properties of coral reef substrate and implications for coral colony integrity. Coral Reefs, 32 (1). pp. 173-179.

Januchowski-Hartley, Fraser, Graham, Nicholas A.J., Cinner, Joshua E., and Russ, Garry R. (2013) Spillover of fish naïveté from marine reserves. Ecology Letters, 16 (2). pp. 191-197.

White, James R., McCormick, Mark I., and Meekan, Mark G. (2013) Syndromes or flexibility: behavior during a life history transition of a coral reef fish. PLoS ONE, 8 (12). e84262. pp. 1-9.

Gyuris, Emma, and Castell, Laura (2013) Tell them or show them? How to improve science students' skills of critical reading. International Journal of Innovation in Science and Mathematics Education, 21 ( 1). . pp. 70-80.

Li, Yan, Mangott, Arnold, Grierson, Scott, and Schenk, Peer M. (2013) Thinking outside of the box: potential of zooplankton for microalgae harvesting. Biofuels, 4 (3). pp. 263-266.

Romano, Nicholas, and Zeng, Chaoshu (2013) Toxic effects of ammonia, nitrite, and nitrate to decapod crustaceans: a review on factors influencing their toxicity, physiological consequences, and coping mechanisms. Reviews in Fisheries Science, 21 (1). pp. 1-21.

Heimann, Kirsten, Karthikayan, Obulisamy P, and Cires, Samuel (2013) Turning bad gas into good solids. Queensland Mining Energy Bulletin (Spring). pp. 92-96.

Lönnstedt, Oona M., and McCormick, Mark I. (2013) Ultimate predators: lionfish have evolved to circumvent prey risk assessment abilities. PLoS ONE, 8 (10). e75781. pp. 1-8.

Chin, Andrew, Simpfendorfer, Colin, Tobin, Andrew, and Heupel, Michelle (2013) Validated age, growth and reproductive biology of Carcharhinus melanopterus, a widely distributed and exploited reef shark. Marine and Freshwater Research, 64 (10). pp. 965-975.

Castine, Sarah A., McKinnon, A. David, Paul, Nicholas A., Trott, Lindsay A., and de Nys, Rocky (2013) Wastewater treatment for land-based aquaculture: improvements and value-adding alternatives in model systems from Australia. Aquaculture Environment Interactions, 4 (3). pp. 285-300.

Nicolet, K.J., Hoogenboom, M.O., Gardiner, N.M., Pratchett, M.S., and Willis, B.L. (2013) The corallivorous invertebrate Drupella aids in transmission of brown band disease on the Great Barrier Reef. Coral Reefs, 32 (2). pp. 585-595.

Bloecher, Nina, de Nys, Rocky, Poole, Andrew J., and Guenther, Jana (2013) The fouling hydroid Ectopleura larynx: a lack of effect of next generation antifouling technologies. Biofouling, 29 (3). pp. 237-246.

Lukoschek, Vimoksalehi, Cross, Peter, Torda, Gergely, Zimmerman, Rachel, and Willis, Bette L. (2013) The importance of coral larval recruitment for the recovery of reefs impacted by Cyclone Yasi in the central Great Barrier Reef. PLoS ONE, 8 (6). e65363. pp. 1-11.

Hutson, Kate S., Mata, Leonardo, Paul, Nicholas A., and De Nys, Rocky (2012) Seaweed extracts as a natural control against the monogenean ectoparasite, Neobenedenia sp., infecting farmed barramundi (Lates calcarifer). International Journal for Parasitology, 42 (13-14). pp. 1135-1141.

Donelson, Jennifer, Munday, Philip, McCormick, Mark, and Pitcher, C.R. (2012) Rapid transgenerational acclimation of a tropical reef fish to climate change. Nature Climate Change, 2. pp. 30-32.

van de Water, Jeroen A.J.M., van Oppen, Madeleine J.H., and Willis, Bette (2012) Absence of skeleton deposition in juveniles of the scleractinian coral Acropora millepora. Coral Reefs, 31 (4). p. 1111.

Puill-Stephan, E., Willis, B.L., Abrego, D., Raina, J-B., and van Oppen, M.J.H. (2012) Allorecognition maturation in the broadcast-spawning coral Acropora millepora. Coral Reefs, 31 (4). pp. 1019-1028.

Sun, D., Blomberg, S.P., Cribb, T.H., McCormick, M.I., and Grutter, A.S. (2012) The effects of parasites on the early life stages of a damselfish. Coral Reefs, 31 (4). pp. 1065-1075.

Wen, Colin K., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., and Jones, Geoffrey P. (2012) Evaluating the effects of marine reserves on diet, prey availability and prey selection by juvenile predatory fishes. Marine Ecology Progress Series, 469. pp. 133-144.

Januchowski-Hartley, Fraser, Nash, Kirsty, and Lawton, Rebecca (2012) Influence of spear guns, dive gear and observers on estimating fish flight initiation distance on coral reefs. Marine Ecology Progress Series, 469. pp. 113-119.

Gehrke, P., Sheaves, M., Figa, B., Boseto, D., Terry, J., Wani, J., and Ellison, J. (2012) Climate change prospects for freshwater fisheries in the tropical pacific. Water, 39 (7). pp. 81-86.

Lind, Curtis E., Evans, Brad S., Elphinstone, Martin S., Taylor, Joseph J.U., and Jerry, Dean R. (2012) Phylogeography of a pearl oyster (Pinctada maxima) across the Indo-Australian Archipelago: evidence of strong regional structure and population expansions but no phylogenetic breaks. Biological Journal of the Linnean Society, 107 (3). pp. 632-646.

Purcell, Steven W., Hair, Cathy A., and Mills, David J. (2012) Sea cucumber culture, farming and sea ranching in the tropics: progress, problems and opportunities. Aquaculture, 368-369. pp. 68-81.

Munday, Philip L., McCormick, Mark I., Meekan, Mark, Dixson, Danielle L., Watson, Sue-Ann, Chivers, Douglas P., and Ferrari, Maud C.O. (2012) Selective mortality associated with variation in CO2 tolerance in a marine fish. Ocean Acidification, 1 (1). pp. 1-5.

Bode, Michael, Connolly, Sean R., and Pandolfi, John M. (2012) Species differences drive nonneutral structure in Pleistocene coral communities. American Naturalist, 180 (5). pp. 577-588.

Gosch, Björn J., Magnusson, Marie, Paul, Nicholas A., and de Nys, Rocky (2012) Total lipid and fatty acid composition of seaweeds for the selection of species for oil-based biofuel and bioproducts. GCB Bioenergy, 4 (6). pp. 919-930.

Carl, C., Poole, A.J., Vucko, M.J., Williams, M.R., Whalan, S., and De Nys, R. (2012) Enhancing the efficacy of fouling-release coatings against fouling by Mytilus galloprovincialis using nanofillers. Biofouling, 28 (10). pp. 1077-1091.

Bellwood, David R., Baird, Andrew H., Depczynski, Martial, González-Cabello, Alonso, Hoey, Andrew S., Lefevre, Carine D., and Tanner, Jennifer K. (2012) Coral recovery may not herald the return of fishes on damaged coral reefs. Oecologia, 170 (2). 1- 7.

Palmer, C. V., Graham, E., and Baird, A. H. (2012) Immunity through early development of coral larvae. Developmental and Comparative Immunology, 38 (2). 395-399.

McCormick, Mark I. (2012) Lethal effects of habitat degradation on fishes through changing competitive advantage. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1744). pp. 3899-3904.

Watson, Sue-Ann, Peck, Lloyd S., Tyler, Paul A., Southgate, Paul C., Tan, Koh Siang, Day, Robert W., and Morley, Simon A. (2012) Marine invertebrate skeleton size varies with latitude, temperature and carbonate saturation: implications for global change and ocean acidification. Global Change Biology, 18 (10). pp. 3026-3038.

Watson, Sue-Ann, Southgate, Paul C., Miller, Gabrielle M., Moorhead, Jonathan A., and Knauer, Jens (2012) Ocean acidification and warming reduce juvenile survival of the fluted giant clam, Tridacna squamosa. Molluscan Research, 32 (3). pp. 177-180.

Castine, Sarah A., Erler, Dirk V., Trott, Lindsay A., Paul, Nicholas A., De Nys, Rocky, and Eyre, Bradley D. (2012) Denitrification and anammox in tropical aquaculture settlement ponds: an isotope tracer approach for evaluating N2 production. PLoS ONE, 7 (9). e42810.

Manassa, R.P., and McCormick, M.I. (2012) Risk assessment via predator diet cues in a coral reef goby. Journal of Experimental Marine Biology and Ecology, 426-427. pp. 48-52.

de Santis, Christian, B. Gomes, Giana, and Jerry, Dean R. (2012) Abundance of myostatin gene transcripts and their correlation with muscle hypertrophy during the development of barramundi, Lates calcarifer. Comparative Biochemistry and Physiology-Part B: biochemistry & molecular biology, 163 (1). pp. 101-107.

Boaden, A.E., and Kingsford, M.J. (2012) Diel behaviour and trophic ecology of Scolopsis bilineatus (Nemipteridae). Coral Reefs, 31 (3). pp. 871-883.

Figueiredo, Joana, and Connolly, Sean R. (2012) Dispersal-mediated coexistence under recruitment limitation and displacement competition. Ecological Modelling, 243. pp. 133-142.

Palmer, C.V., Bythell, J.C., and Willis, B.L. (2012) Enzyme activity demonstrates multiple pathways of innate immunity in Indo-Pacific anthozoans. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1743). pp. 3879-3887.

Feeney, W.E., Lönnstedt, O.M., Bosiger, Y., Martin, J., Jones, G.P., Rowe, R.J., and McCormick, M.I. (2012) High rate of prey consumption in a small predatory fish on coral reefs. Coral Reefs, 31 (3). pp. 909-918.

Pratchett, Morgan S., Coker, Darren J., Jones, Geoffrey P., and Munday, Philip L. (2012) Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss. Ecology and Evolution, 2 (9). pp. 2168-2180.

Berkstrom, Charlotte, Jones, Geoffrey P., McCormick, Mark I., and Srinivasan, Maya (2012) Ecological versatility and its importance for the distribution and abundance of coral reef wrasses. Marine Ecology Progress Series, 461. pp. 151-163.

Sheaves, Marcus (2012) Ecosystem equivalence and the ability to generalise: insights from global consistencies in mangrove fish assemblages. Marine Ecology Progress Series, 461. pp. 137-149.

Kelly, Jenny, Saggers, Sherry, Taylor, Kylie, Pearce , Glenn, Massey, Peter, Bull, Jennifer, Odo, Travis, Thomas, John, Billycan, Rosita, Judd, Jenni, Reilly, Susan, and Ahboo, Shayne (2012) "Makes you proud to be black eh?": Reflections on meaningful Indigenous research participation. International Journal for Equity in Health, 11 (40). pp. 1-15.

de Paula Silva, Pedro H., De Nys, Rocky, and Paul, Nicholas A. (2012) Seasonal growth dynamics and resilience of the green tide alga Cladophora coelothrix in high-nutrient tropical aquaculture. Aquaculture Environment Interactions , 2 (3). pp. 253-266.

Macintosh, Hugh, De Nys, Rocky, and Whalan, Stephen (2012) Shipworms as a model for competition and coexistence in specialized habitats. Marine Ecology Progress Series, 461. pp. 95-105.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2012) Mortality rates for two shark species occupying a shared coastal environment. Fisheries Research, 125-126. pp. 184-189.

Moore, Bradley R., Simpfendorfer, Colin A., Newman, Stephen J., Stapley, Jason M., Allsop, Quentin, Sellin, Michelle J., and Welch, David J. (2012) Spatial variation in life history reveals insight into connectivity and geographic population structure of a tropical estuarine teleost: king threadfin, Polydactylus macrochir. Fisheries Research, 125-126. pp. 214-224.

Chong-Seng, Karen M., Mannering, Thomas D., Pratchett, Morgan S., Bellwood, David R., and Graham, Nicholas A.J. (2012) The influence of coral reef benthic condition on associated fish assemblages. PLoS ONE, 7 (8). e42167. pp. 1-10.

Kingsford, M.J., Seymour, J.E., and O'Callaghan, M.D. (2012) Abundance patterns of cubozoans on and near the Great Barrier Reef. Hydrobiologia, 690 (1). pp. 257-268.

Olsen, Esben Moland, Heupel, Michelle R., Simpfendorfer, Colin A., and Moland, Even (2012) Harvest selection on Atlantic cod behavioral traits: implications for spatial management. Ecology and Evolution, 2 (7). pp. 1549-1562.

Dixson, Danielle L., Pratchett, Morgan S., and Munday, Philip L. (2012) Reef fishes innately distinguish predators based on olfactory cues associated with recent prey items rather than individual species. Animal Behaviour, 84 (1). pp. 45-51.

Camus, Thomas, and Zeng, Chaoshu (2012) Reproductive performance, survival and development of nauplii and copepodites, sex ratio and adult life expectancy of the harpacticoid copepod, Euterpina acutifrons, fed different microalgal diets. Aquaculture Research, 43 (8). pp. 1159-1169.

Manassa, R.P., and McCormick, M.I. (2012) Social learning and acquired recognition of a predator by a marine fish. Animal Cognition, 15 (4). pp. 559-565.

Mooney, C. J., and Kingsford, M. J. (2012) Sources and movements of Chironex fleckeri medusae using statolith elemental chemistry. Hydrobiologia, 690 (1). pp. 269-277.

Templeman, Michelle A., and Kingsford, Michael J. (2012) Variation in soft tissue chemistry among scyphozoan and cubozoan jellyfishes from the Great Barrier Reef, Australia. Hydrobiologia, 690 (1). pp. 279-290.

Newton, J.R., De Santis, C., and Jerry, D.R. (2012) The gene expression response of the catadromous perciform barramundi Lates calcarifer to an acute heat stress. Journal of Fish Biology, 81 (1). pp. 81-93.

Nash, Kirsty L., Graham, Nicholas A.J., Januchowski-Hartley, Fraser A., and Bellwood, David R. (2012) Influence of habitat condition and competition on foraging behaviour of parrotfishes. Marine Ecology Progress Series, 457. pp. 113-124.

Noonan, Sam H.C., Jones, Geoffrey P., and Pratchett, Morgan S. (2012) Coral size, health and structural complexity: effects on the ecology of a coral reef damselfish. Marine Ecology Progress Series, 456. pp. 127-137.

Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., and Jones, Geoffrey P. (2012) Larval export from marine reserves and the recruitment benefit for fish and fisheries. Current Biology, 22 (11). pp. 1023-1028.

Ferrari, Maud C.O., McCormick, Mark I., Munday, Philip L., Meekan, Mark G., Dixson, Danielle L., Lönnstedt, Oona, and Chivers, Douglas P. (2012) Effects of ocean acidification on visual risk assessment in coral reef fishes. Functional Ecology, 26 (3). pp. 553-558.

Lönnstedt, Oona M., McCormick, Mark I., Meekan, Mark G., Ferrari, Maud C.O., and Chivers, Douglas P. (2012) Learn and live: predator experience and feeding history determines prey behaviour and survival. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1736). pp. 2091-2098.

Whitney, Nicholas M., Robbins, William D., Schultz, Jennifer K., Bowen, Brian W., and Holland, Kim N. (2012) Oceanic dispersal in a sedentary reef shark (Triaenodon obesus): genetic evidence for extensive connectivity without a pelagic larval stage. Journal of Biogeography, 39 (6). pp. 1144-1156.

Milione, Michael, and Southgate, Paul C. (2012) Reproductive cycle of the winged pearl oyster, Pteria penguin (Röding 1793) (Pteriidae) in north-eastern Australia. Invertebrate Reproduction and Development, 56 (2). pp. 164-171.

Ballagh, Aaron C., Welch, David J., Newman, Stephen J., Allsop, Quentin, and Stapley, Jason M. (2012) Stock structure of the blue threadfin (Eleutheronema tetradactylum) across northern Australia derived from life-history characteristics. Fisheries Research, 121-122. pp. 63-72.

Buston, Peter M., Jones, Geoffrey P., Planes, Serge, and Thorrold, Simon R. (2012) Probability of successful larval dispersal declines fivefold over 1 km in a coral reef fish. Proceedings of the Royal Society of London B: Biological Sciences, 279 (1735). pp. 1883-1888.

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2012) The marine sponge Ianthella basta can recover from stress-induced tissue regression. Hydrobiologia, 687 (1). pp. 227-235.

Domingos, J.A., Fromm, P., Smith-Keune, C., and Jerry, D.R. (2012) A robust flow-cytometric protocol for assessing growth rate of hatchery-reared barramundi Lates calcarifer larvae. Journal of Fish Biology, 80 (6). pp. 2253-2266.

Hughes, Terry P., Baird, Andrew H., Dinsdale, Elizabeth A., Moltschaniwskyj, Natalie A., Pratchett, Morgan S., Tanner, Jason E., and Willis, Bette L. (2012) Assembly rules of reef corals are flexible along a steep climatic gradient. Current Biology, 22 (8). pp. 736-741.

Andutta, Fernando P., Kingsford, Michael J., and Wolanski, Eric (2012) 'Sticky water' enables the retention of larvae in a reef mosaic. Estuarine, Coastal and Shelf Science , 101. pp. 54-63.

Morgan, Jess A.T., Harry, Alastair V., Welch, David J., Street, Raewyn, White, Jimmy, Geraghty, Pascal T., Macbeth, William G., Tobin, Andrew, Simpfendorfer, Colin A., and Ovenden, Jennifer R. (2012) Detection of interspecies hybridisation in Chondrichthyes: hybrids and hybrid offspring between Australian (Carcharhinus tilstoni) and common (C. limbatus) blacktip shark found in an Australian fishery. Conservation Genetics, 13 (2). pp. 455-463.

Thibaut, Loïc M., Connolly, Sean R., and Sweatman, Hugh P.A. (2012) Diversity and stability of herbivorous fishes on coral reefs. Ecology, 93 (4). pp. 891-901.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2012) Evaluating marine protected areas for the conservation of tropical coastal sharks. Biological Conservation, 148 (1). pp. 200-209.

Tziouveli, V., Hall, M., and Smith, G.G. (2012) Evaluation of lipid-enriched Artemia on the reproductive performance of the white-striped cleaner shrimp, Lysmata amboinensis. Aquaculture International, 20 (2). pp. 201-211.

Jerry, Dean R., Kvingedal, Renate, Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Safari, Alex E. (2012) Donor-oyster derived heritability estimates and the effect of genotype × environment interaction on the production of pearl quality traits in the silver-lip pearl oyster, Pinctada maxima. Aquaculture, 338-341. pp. 66-71.

Vucko, M.V., King, P.C., Poole, A.J., Carl, C., Jahedi, M.Z., and de Nys, R. (2012) Cold spray metal embedment: an innovative antifouling technology. Biofouling, 28 (3). pp. 239-248.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2012) Influence of coral bleaching, coral mortality and conspecific aggression on movement and distribution of coral-dwelling fish. Journal of Experimental Marine Biology and Ecology, 414-415. pp. 62-68.

Horne, John B., Momigliano, Paolo, Welch, David J., Newman, Stephen J., and Van Herwerden, Lynne (2012) Searching for common threads in threadfins: phylogeography of Australian polynemids in space and time. Marine Ecology Progress Series, 449. pp. 263-276.

Berumen, M.L., Trip, E.D.L., Pratchett, M.S., and Choat, J.H. (2012) Differences in demographic traits of four butterflyfish species between two reefs of the Great Barrier Reef separated by 1,200 km. Coral Reefs, 31 (1). pp. 169-177.

Romano, Nicholas, and Zeng, Chaoshu (2012) Osmoregulation in decapod crustaceans: implications to aquaculture productivity, methods for potential improvement and interactions with elevated ammonia exposure. Aquaculture, 334-337. pp. 12-23.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2012) Patterns of migration between feeding and spawning sites in a coral reef surgeonfish. Coral Reefs, 31 (1). pp. 77-87.

Dixson, D.L. (2012) Predation risk assessment by larval reef fishes during settlement-site selection. Coral Reefs, 31 (1). pp. 255-261.

Bonaldo, R.M., Welsh, J.Q., and Bellwood, D.R. (2012) Spatial and temporal variation in coral predation by parrotfishes on the GBR: evidence from an inshore reef. Coral Reefs, 31 (1). pp. 263-272.

McGinty, E.L., Zenger, K.R., Jones, D.B., and Jerry, D.R. (2012) Transcriptome analysis of biomineralisation-related genes within the pearl sac: host and donor oyster contribution. Marine Genomics, 5. pp. 27-33.

Lönnstedt, Oona M., McCormick, Mark I., and Chivers, Douglas P. (2012) Well-informed foraging: damage-released chemical cues of injured prey signal quality and size to predators. Oecologia, 168 (3). pp. 651-658.

Connolly, Sean R., and Thibaut, Loic M. (2012) A comparative analysis of alternative approaches to fitting species-abundance models. Journal of Plant Ecology, 5 (1). pp. 32-45.

Tziouveli, Vasiliki, and Smith, Greg G. (2012) A comparison of the fatty acid profiles of adult tissues, and newly hatched, fed and starved Lysmata amboinensis larvae. Aquaculture Research, 43 (4). pp. 577-587.

Domenici, Paolo, Allan, Bridie, McCormick, Mark I., and Munday, Philip L. (2012) Elevated carbon dioxide affects behavioural lateralization in a coral reef fish. Biology Letters, 8 (1). pp. 78-81.

Puill-Stephan, E., van Oppen, M.J.H., Pichavant-Rafini, K., and Willis, B.L. (2012) High potential for formation and persistence of chimeras following aggregated larval settlement in the broadcast spawning coral, Acropora millepora. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1729). pp. 699-708.

Mata, Leonardo, Gaspar, Helena, and Santos, Rui (2012) Carbon/nutrient balance in relation to biomass production and halogenated compound content in the red alga Asparagopsis taxiformis (Bonnemaisoniaceae). Journal of Phycology, 48 (1). pp. 248-253.

Athauda, Saman, Anderson, Trevor, and de Nys, Rocky (2012) Effect of rearing water temperature on protandrous sex inversion in cultured Asian Seabass (Lates calcarifer). General and Comparative Endocrinology, 175 (3). pp. 416-423.

Ferrari, Maud C.O., Manassa, Rachel P., Dixson, Danielle L., Munday, Philip L., McCormick, Mark I., Meekan, Mark G., Sih, Andrew, and Chivers, Douglas P. (2012) Effects of ocean acidification on learning in coral reef fishes. PLoS ONE, 7 (2). e31478. pp. 1-10.

Wu, Xugan, Smith, Greg, and Hall, Michael (2012) Patterns of larval growth, lipid composition and fatty acid deposition during early to mid stages of development in Panulirus ornatus phyllosoma. Aquaculture, 330-333. pp. 63-73.

Montanari, Stefano, Van Herwerden, Lynne, Pratchett, Morgan, Hobbs, Jean-Paul, and Fugedi, Anneli (2012) Reef fish hybridization: lessons learnt from butterflyfishes (genus Chaetodon). Ecology and Evolution, 2 (2). pp. 310-328.

Abdul Wahab, M.A., de Nys, R., and Whalan, S. (2012) Closing the lifecycle for the sustainable aquaculture of the bath sponge Coscinoderma matthewsi. Aquaculture, 324-325. pp. 281-289.

Bannister, R.J., Battershill, C.N., and de Nys, R. (2012) Suspended sediment grain size and mineralogy across the continental shelf of the Great Barrier Reef: impacts on the physiology of a coral reef sponge. Continental Shelf Research, 32. pp. 86-95.

Bird, Michael I., Wurster, Christopher M., de Paula Silva, Pedro H., Paul, Nicholas A., and de Nys, Rocky (2012) Algal biochar: effects and applications. GCB Bioenergy, 4 (1). pp. 61-69.

Hobbs, Jean-Paul A., Jones, Geoffrey P., Munday, Philip L., Connolly, Sean R., and Srinivasan, Maya (2012) Biogeography and the structure of coral reef fish communities on isolated islands. Journal of Biogeography, 39 (1). pp. 130-139.

Devine, Brynn M., Munday, Philip L., and Jones, Geoffrey P. (2012) Homing ability of adult cardinalfish is affected by elevated carbon dioxide. Oecologia, 168 (1). pp. 269-276.

Pisapia, C., Hennige, S.J., Haapkylä, J., Matteucci, R., and Smith, D.J. (2012) Morphological changes in polyp structure of massive coral species in clear and turbid waters. Bulletin of Marine Science, 88 (1). pp. 183-191.

Blowes, Shane A., and Connolly, Sean R. (2012) Risk spreading, connectivity, and optimal reserve spacing. Ecological Applications, 22 (1). pp. 311-321.

Beeden, Roger, Maynard, Jeffrey A., Marshall, Paul A., Heron, Scott F., and Willis, Bette L. (2012) A framework for responding to coral disease outbreaks that facilitates adaptive management. Environmental Management, 49 (1). pp. 1-13.

Barnes, Lachlan, Bellwood, David R., Sheaves, Marcus, and Tanner, Jennifer K. (2012) The use of clear-water non-estuarine mangroves by reef fishes on the Great Barrier Reef. Marine Biology, 159 (1). pp. 211-220.

Glas, Martin S., Sato, Yui, Ulstrup, Karin E., and Bourne, David G. (2012) Biogeochemical conditions determine virulence of black band disease in corals. ISME Journal: multidisciplinary journal of microbial ecology, 6 (8). pp. 1526-1534.

Madin, Joshua S., Hughes, Terry P., and Connolly, Sean R. (2012) Calcification, storm damage and population resilience of tabular corals under climate change. PLoS ONE, 7 (10). e46637. pp. 1-10.

Mitchell, Matthew D., Cowman, Peter F., and McCormick, Mark I. (2012) Chemical alarm cues are conserved within the coral reef fish family Pomacentridae. PLoS ONE, 7 (10). pp. 1-7.

Donelson, J.M., Munday, P.L., and McCormick, M.I. (2012) Climate change may affect fish through an interaction of parental and juvenile environments. Coral Reefs, 31 (3). pp. 753-762.

Harry, A.V., Morgan, J.A.T., Ovenden, J.R., Tobin, A.J., Welch, D.J., and Simpfendorfer, C.A. (2012) Comparison of the reproductive ecology of two sympatric blacktip sharks (Carcharhinus limbatus and Carcharhinus tilstoni) off north-eastern Australia with species identification inferred from vertebral counts. Journal of Fish Biology, 81 (4). pp. 1-9.

Busilacchi, S., Williams, A.J., Russ, G.R., and Begg, G.A. (2012) Complexity of applying minimum legal sizes (MLS) of retention in an indigenous coral reef fishery. Fisheries Management and Ecology.

Messmer, Vanessa, Jones, Geoffrey, Munday, Philip, and Planes, Serge (2012) Concordance between genetic and species diversity in coral reef fishes across the pacific ocean biodiversity gradient. Evolution, 66 (12). pp. 3902-3917.

Whalan, Steve, Webster, Nicole S., and Negri, Andrew P. (2012) Crustose coralline algae and a cnidarian neuropeptide trigger larval settlement in two coral reef sponges. PLoS ONE, 7 (1). e30386. pp. 1-8.

Andreakis, Nikos, Luter, Heidi M., and Webster, Nicole S. (2012) Cryptic speciation and phylogeographic relationships in the elephant ear sponge Ianthella basta (Porifera, Ianthellidae) from northern Australia. Zoological Journal of the Linnean Society, 166 (2). pp. 225-235.

Kramer, M.J., Bellwood, D.R., and Bellwood, O. (2012) Cryptofauna of the epilithic algal matrix on an inshore coral reef, Great Barrier Reef. Coral Reefs, 31 (4). pp. 1007-1015.

Das, Sarat Kumar, and Sivakugan, N. (2012) Discussion of "Neural network modeling of resilient modulus using routine subgrade soil properties" by Musharraf Zaman, Pranshoo Solanki, Ali Ebrahimi, and Luther White. International Journal of Geomechanics, 12 (4). pp. 517-518.

Botté, E.S., Jerry, D.R., King, S. Codi, Smith-Keune, C., and Negri, A.P. (2012) Effects of chlorpyrifos on cholinesterase activity and stress markers in the tropical reef fish Acanthochromis polyacanthus. Marine Pollution Bulletin, 65 (4-9). pp. 384-393.

Yang, Xiaozhen, Wang, Jinfeng, Zhao, Liulan, Fan, Peng, Wu, Xugan, Cheng, Yongxu, and Zeng, Chaoshu (2012) Effects of elevated ambient histamine level on survival, growth, sexual maturity and tissue histamine accumulation of the mysis Neomysis awatschensis and Neomysis japonica Nakazawa. Aquaculture International, 20. pp. 347-356.

Chan, Neil C. S., Connolly, Sean R., and Mapstone, Bruce D. (2012) Effects of sex change on the implications of marine reserves for fisheries. Ecological Applications, 22 (3). pp. 778-791.

Frisch, Ashley J., Cole, Andrew J., Hobbs, Jean-Paul A., Rizzari, Justin R., and Munkres, Katherine P. (2012) Effects of spearfishing on reef fish populations in a multi-use conservation area. PLoS ONE, 7 (12). e51938. pp. 1-11.

Wassnig, Matthew, and Southgate, Paul C. (2012) Embryonic and larval development of Pteria penguin (Röding, 1798) (Bivalvia: Pteriidae). Journal of Molluscan Studies, 78 (1). pp. 134-141.

Leuzinger, Sebastian, Willis, Bette L., and Anthony, Kenneth R.N. (2012) Energy allocation in a reef coral under varying resource availability. Marine Biology: international journal on life in oceans and coastal waters, 159 (1). pp. 177-186.

Carl, C., Poole, A.J., Sexton, B.A., Glenn, F.L., Vucko, M.J., Williams, M.R., Whalan, S., and de Nys, R. (2012) Enhancing the settlement and attachment strength of pediveligers of Mytilus galloprovincialis by changing surface wettability and microtopography. Biofouling, 28 (2). pp. 175-186.

Stella, Jessica (2012) Evidence of corallivory by the keyhole limpet Diodora galeata. Coral Reefs, 31 (2). p. 579.

Sweet, Michael, Kirkham, Nigel, Bendall, Mark, Currey, Leanne, Bythell, John, and Heupel, Michelle (2012) Evidence of melanoma in wild marine fish populations. PLoS One, 7 (8). e41989. e41989.

Edmunds, Richard C., Smith-Keune, Carolyn, Van Herwerden, Lynne, Fulton, Chris J., and Jerry, Dean R. (2012) Exposing local adaptation: synergistic stressors elicit population-specific lactate dehydrogenase-B (ldh-b) expression profiles in Australian barramundi, Lates calcarifer. Aquatic Sciences, 74 (1). pp. 171-178.

Puill-Stephan, Eneour, Seneca, François O., Miller, David J., van Oppen, Madeleine J.H., and Willis, Bette L. (2012) Expression of putative immune response genes during early ontogeny in the coral Acropora millepora. PLoS ONE, 7 (7). e39099. pp. 1-5.

McLeod, Ian M., Parsons, Darren M., Morrison, Mark A., Le Port, Agnès, and Taylor, Richard B. (2012) Factors affecting the recovery of soft-sediment mussel reefs in the Firth of Thames, New Zealand. Marine and Freshwater Research, 63 (1). pp. 78-83.

Angell, Alex R., Pirozzi, Igor, de Nys, Rocky, and Paul, Nicholas A. (2012) Feeding preferences and the nutritional value of tropical algae for the abalone Haliotis asinina. PLoS ONE, 7 (6). e388547. pp. 1-10.

Sheaves, Marcus, Johnston, Ross, and Connolly, Rod M. (2012) Fish assemblages as indicators of estuary ecosystem health. Wetlands Ecology and Management, 20 (6). pp. 477-490.

Young, M.A.L., and Bellwood, D.R. (2012) Fish predation on sea urchins on the Great Barrier Reef. Coral Reefs, 31 (3). pp. 731-738.

Barbosa, Miguel, Connolly, Sean R., Hisano, Mizue, Dornelas, Maria, and Magurran, Anne E. (2012) Fitness consequences of female multiple mating: a direct test of indirect benefits. BMC Evolutionary Biology, 12. 185. pp. 1-11.

Connolly, S.R., Lopez-Yglesias, M.A., and Anthony, K.R.N. (2012) Food availability promotes rapid recovery from thermal stress in a scleractinian coral. Coral Reefs, 31 (4). pp. 951-960.

van der Meer, Martin, Hobbs, Jean-Paul, Jones, Geoffrey, and Van Herwerden, Lynne (2012) Genetic Connectivity among and self-replenishment within island populations of a restricted range subtropical reef fish. PLoS ONE, 7 (11). e49660. pp. 1-11.

Ruiz-Morenol, Diego, Willis, Bette L., Page, A. Cathie, Weil, Ernesto, Cróquer, Aldo, Vargas-Angel, Bernardo, Jordan-Garza, Adán Guillermo, Jordán-Dahlgren, Eric, Raymundo, Laurie, and Harvell, C. Drew (2012) Global coral disease prevalence associated with sea temperature anomalies and local factors. Diseases of Aquatic Organisms, 100 (3). pp. 249-261.

Milione, Michael, and Southgate, Paul (2012) Growth of the winged pearl oyster, Pteria penguin, at dissimilar sites in northeastern Australia. Journal of Shellfish Research, 31 (1). pp. 13-20.

Briffa, Mark, de la Haye, Kate, and Munday, Philip L. (2012) High CO2 and marine animal behaviour: potential mechanisms and ecological consequences. Marine Pollution Bulletin, 64 (8). pp. 1519-1528.

Todd, Erica V., Blair, David, Limpus, Colin J., Limpus, Duncan J., and Jerry, Dean R. (2012) High incidence of multiple paternity in an Australian snapping turtle (Elseya albagula). Australian Journal of Zoology, 60 (6). pp. 412-418.

van der Meer, M.H., Jones, G.P., Hobbs, J.-P.A., and Van Herwerden, L. (2012) Historic hybridization and introgression between two iconic Australian anemonefish and contemporary patterns of population connectivity. Ecology and Evolution, 2 (7). pp. 1592-1604.

Welsh, J.Q., and Bellwood, D.R. (2012) How far do schools of roving herbivores rove? A case study using Scarus rivulatus. Coral Reefs, 31 (4). pp. 991-1003.

Bellwood, David R., Hoey, Andrew S., and Hughes, Terence P. (2012) Human activity selectively impacts the ecosystem roles of parrotfishes on coral reefs. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1733). pp. 1621-1629.

van der Meer, Martin H., Gardner, Michael G., Hobbs, Jean-Paul A., Jones, G.P., and van Herwerden, Lynne (2012) Identification of seventeen microsatellite markers for conservation genetic studies of the endemic anemonefish, Amphiprion mccullochi. Conservation Genetics Resources, 4 (2). pp. 247-250.

van der Meer, Martin H., Gardiner, Michael G., Hobbs, Jean-Paul A., Pratchett, Morgan, and van Herwerden, Lynne (2012) Identification of twenty one microsatellite loci for conservation genetic studies of the endemic butterflyfish Chaetodon tricinctus. Conservation Genetics, 4 (2). pp. 243-246.

Neaves, Linda E., Zenger, Kyall R., Prince, Robert I.T., and Eldridge, Mark D.B. (2012) Impact of Pleistocene aridity oscillations on the population history of a widespread, vagile Australian mammal, Macropus fuliginosus. Journal of Biogeography, 39 (8). pp. 1545-1563.

Munday, Philip L., McCormick, Mark I., and Nilsson, Göran E. (2012) Impact of global warming and rising CO₂ levels on coral reef fishes: what hope for the future? The Journal of Experimental Biology, 215. pp. 3865-3873.

Abrego, David, Willis, Bette L., and van Oppen, Madeleine J.H. (2012) Impact of light and temperature on the uptake of algal symbionts by coral juveniles. PLoS ONE, 7 (11). e50311. pp. 1-9.

Woolsey, Erika, Bainbridge, Scott J., Kingsford, Michael J., and Byrne, Maria (2012) Impacts of cyclone Hamish at One Tree Reef: integrating environmental and benthic habitat data. Marine Biology, 159 (4). pp. 793-803.

Romano, Nicholas, Zeng, Chaoshu, Mat Noordin, Noordiyana, and Ng, Wing-Keong (2012) Improving the survival, growth and hemolymph ion maintenance of early juvenile blue swimmer crabs, Portunus pelagicus, at hypo- and hyper-osmotic conditions through dietary long chain PUFA supplementation. Aquaculture, 342-343. pp. 24-30.

Wenger, Amelia S., Johansen, Jacob L., and Jones, Geoffrey P. (2012) Increasing suspended sediment reduces foraging, growth and condition of a planktivorous damselfish. Journal of Experimental Marine Biology and Ecology, 428. pp. 43-48.

Takahashi, Miwa, McCormick, Mark, Munday, Philip, and Jones, Geoffrey (2012) Influence of seasonal and latitudinal temperature variation on early life-history traits of a coral reef fish. Marine and Freshwater Research, 63. pp. 856-864.

Nowicki, Jessica P., Miller, Gabrielle M., and Munday, Philip L. (2012) Interactive effects of elevated temperature and CO2 on foraging behavior of juvenile coral reef fish. Journal of Experimental Marine Biology and Ecology, 412. pp. 46-51.

Carrette, Teresa J., Underwood, Avril H., and Seymour, Jamie E. (2012) Irukandji syndrome: a widely misunderstood and poorly researched tropical marine envenoming. Diving and Hyperbaric Medicine, 42 (4). pp. 214-223.

McCormick, Mark I., and Weaver, Christine J. (2012) It pays to be pushy: intracohort interference competition between two reef fishes. PLoS ONE, 7 (8). e42590. pp. 1-12.

Bosiger, Yoland J., Lonnstedt, Oona M., McCormick, Mark I., and Ferrari, Maud C.O. (2012) Learning temporal patterns of risk in a predator-diverse environment. PLoS ONE, 7 (4). e34535. pp. 1-7.

Leigh, Kellie A., Zenger, Kyall R., Tammen, Imke, and Raadsma, Herman W. (2012) Loss of genetic diversity in an outbreeding species: small population effects in the African wild dog (Lycaon pictus). Conservation Genetics, 13 (3). pp. 767-777.

Macintosh, Hugh (2012) Lyrodus turnerae, a new teredinid from eastern Australia and the Coral Sea (Bivalvia: Teredinidae). Molluscan Research, 31 (1). pp. 36-42.

Taylor, Brett, McIlwain, Jennifer L., and Kerr, Alexander (2012) Marine reserves and reproductive biomass: a case study of a heavily targeted reef fish. PLoS One, 7 (6). pp. 1-16.

Nilsson, Göran, Dixson, Danielle L., Domenici, Paolo, McCormick, Mark I., Sørensen, Christina, Watson, Sue-Ann, and Munday, Philip L. (2012) Near-future carbon dioxide levels alter fish behaviour by interfering with neurotransmitter function. Nature Climate Change, 2. pp. 201-204.

Malerba, Martino E., Connolly, Sean R., and Heimann, Kirsten (2012) Nitrate–nitrite dynamics and phytoplankton growth: formulation and experimental evaluation of a dynamic model. Limnology and Oceanography, 57 (5). pp. 1555-1571.

Maddams, Jessica Claire, and McCormick, Mark Ian (2012) Not all offspring are created equal: variation in larval characteristics in a serially spawning damselfish. PLoS ONE, 7 (11). pp. 1-10.

Clark, Nicholas J., and Russ, Garry R. (2012) Ontogenetic shifts in the habitat associations of butterflyfishes (F. Chaetodontidae). Environmental Biology of Fishes, 94 (4). pp. 579-590.

Jimmy, Robert A., Pickering, Timothy D., and Hair, Cathy A. (2012) Overview of sea cucumber aquaculture and stocking research in the Western Pacific region. Australian Centre for International Agricultural Research Proceedings, 136. pp. 12-21.

Moore, B.R., Welch, D.J., Newman, S.J., and Lester, R.J.G. (2012) Parasites as indicators of movement and population connectivity of a non-diadromous, tropical estuarine teleost: king threadfin Polydactylus macrochir. Journal of Fish Biology, 81 (1). pp. 230-252.

Miller, Gabrielle M., Watson, Sue-Ann, Donelson, Jennifer M., McCormick, Mark I., and Munday, Philip L. (2012) Parental environment mediates impacts of increased carbon dioxide on a coral reef fish. Nature Climate Change, 2. pp. 858-861.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2012) Patterns and persistence of larval retention and connectivity in a marine fish metapopulation. Molecular Ecology, 21 (19). pp. 4695-4705.

Choat, John H., Klanten, Oya. S., Van Herwerden, Lynne, Robertson, D. Ross, and Clements, Kendall D. (2012) Patterns and processes in the evolutionary history of parrotfishes (Family Labridae). Biological Journal of the Linnean Society, 107 (3). pp. 529-557.

Welsh, J.Q., Fox, R.J,, Webber, D.M., and Bellwood, D.R. (2012) Performance of remote acoustic receivers within a coral reef habitat: implications for array design. Coral Reefs, 31 (3). pp. 693-702.

Leprieur, Fabien, Albouy, Camille, De Bortoli, Julien, Cowman, Peter F., Bellwood, David R., and Mouillot, David (2012) Quantifying phylogenetic beta diversity: distinguishing between 'true' turnover of lineages and phylogenetic diversity gradients. PLoS One, 7 (8). pp. 1-12.

Eagle, Janelle V., Baird, Andrew H., Jones, Geoffrey P., and Kingsford, Michael J. (2012) Recruitment hotspots: consistent spatial patterns in the relative abundance of coral recruits at One Tree Island, Australia. Galaxea, Journal of Coral Reef Studies, 14 (1). pp. 5-22.

Welsh, Justin Q., and Bellwood, David R. (2012) Regional endothermy in a coral reef fish? PLoS ONE, 7 (3). e33187. pp. 1-5.

Barnett, Adam, Abrantes, Kátya, Seymour, Jamie, and Fitzpatrick, Richard (2012) Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation. PLoS One, 7 (5). pp. 1-10.

Devine, B.M., Munday, P.L., and Jones, G.P. (2012) Rising CO2 concentrations affect settlement behaviour of larval damselfishes. Coral Reefs, 31 (1). pp. 229-238.

Hair, Cathy (2012) Sandfish (Holothuria scabra) production and sea-ranching trial in Fiji. Australian Centre for International Agricultural Research Proceedings, 136. pp. 129-141.

Goatley, Christopher H.R., and Bellwood, David R. (2012) Sediment suppresses herbivory across a coral reef depth gradient. Biology Letters, 8 (6). pp. 1016-1018.

Welsh, J.Q., and Bellwood, D.R. (2012) Spatial ecology of the steephead parrotfish (Chlorurus microrhinos): an evaluation using acoustic telemetry. Coral Reefs, 31 (1). pp. 55-65.

Saunders, Richard J., Paul, Nicholas A., Hu, Yi, and de Nys, Rocky (2012) Sustainable sources of biomass for bioremediation of heavy metals in waste water derived from coal-fired power generation. PLoS ONE, 7 (5). e36470. pp. 1-8.

Luter, Heidi M., Whalan, Steve, and Webster, Nicole S. (2012) Thermal and sedimentation stress are unlikely causes of brown spot syndrome in the coral reef sponge, Ianthella basta. PLoS ONE, 7 (6). e39779. pp. 1-9.

Donelson, Jennifer M., and Munday, Philip L. (2012) Thermal sensitivity does not determine acclimation capacity for a tropical reef fish. Journal of Animal Ecology, 81 (5). pp. 1126-1131.

Hoey, Andrew, Bellwood, David R., and Barnett, Adam (2012) To feed or to breed: morphological constraints of mouthbrooding in coral reef cardinalfishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1737). pp. 2426-2432.

Palmer, C.V., and Traylor-Knowles, N. (2012) Towards an integrated network of coral immune mechanisms. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1745). pp. 4106-4114.

Speed, C.W., Meekan, M.G., Field, I.C., McMahon, C.R., Abrantes, K., and Bradshaw, C.J.A. (2012) Trophic ecology of reef sharks determined using stable isotopes and telemetry. Coral Reefs, 31 (2). pp. 357-367.

Carl, Christina, Poole, Andrew J., Williams, Mike R., and de Nys, Rocky (2012) Where to settle-settlement preferences of Mytilus galloprovincialis and choice of habitat at a micro spatial scale. PLoS One, 7 (12). e52358. pp. 1-10.

Grech, Alana, Chartrand-Miller, Katie, Erftemeijer, Paul, Fonseca, Mark, McKenzie, Len, Rasheed, Michael, Taylor, Helen, and Coles, Rob (2012) A comparison of threats, vulnerabilities and management approaches in global seagrass bioregions. Environmental Research Letters, 7 (2). 024006. pp. 1-8.

Kerry, J.T., and Bellwood, D.R. (2012) The effect of coral morphology on shelter selection by coral reef fishes. Coral Reefs, 31 (2). pp. 415-424.

Fitridge, Isla, Dempster, Tim, Guenther, Jana, and de Nys, Rocky (2012) The impact and control of biofouling in marine aquaculture: a review. Biofouling, 28 (7). pp. 649-669.

Johansson, C. L., Bellwood, D. R., and Depczynski, M. (2012) The importance of live coral for small-sized herbivorous reef fishes in physically challenging environments. Marine and Freshwater Research, 63 (8). pp. 672-679.

Comeros-Rynal, Mia T., Choat, John Howard, Polidoro, Beth A., Clements, Kendall D., Abesamis, Rene, Craig, Matthew T., Lazuardi, Muhammad Erdi, McIlwain, Jennifer, Muljadi, Andreas, Myers, Robert F., Nañola, Cleto L., Pardede, Shinta, Rocha, Luiz A., Russell, Barry, Sanciangco, Jonnell C., Stockwell, Brian, Harwell, Heather, and Carpenter, Kent E. (2012) The likelihood of extinction of iconic and dominant herbivores and detritivores of coral reefs: the parrotfishes and surgeonfishes. PLoS ONE, 7 (7). e39825. pp. 1-13.

Hodge, Jennifer R., Read, Charmaine I., Van Herwerden, Lynne, and Bellwood, David R. (2012) The role of peripheral endemism in species diversification: evidence from the coral reef fish genus Anampses (Family: Labridae). Molecular Phylogenetics and Evolution, 62 (2). pp. 653-663.

Goatley, Christopher H.R., Hoey, Andrew S., and Bellwood, David R. (2012) The role of turtles as coral reef macroherbivores. PLoS One, 7 (6). pp. 1-7.

Simpson, Stephen D, Munday, Philip, Wittenrich, Matthew, Manassa, Rachel, Dixson, Danielle, Gagliano, Monica, and Yan, Hong Y (2011) Ocean acidification erodes crucial auditory behaviour in a marine fish. Biology Letters, 7 (6). pp. 917-920.

Leahy, Susannah, McCormick, Mark I., Mitchell, Matthew D., and Ferrari, Maud C.O. (2011) To fear or to feed: the effects of turbidity on perception of risk by a marine fish. Biology Letters, 7 (6). pp. 811-813.

Pandolfi, John, Connolly, Sean, Marshall, Dustin J., and Cohern, Anne L. (2011) The future of coral reefs - a response. Science, 334 (6062). pp. 1495-1496.

Cowman, P.F., and Bellwood, D.R. (2011) Coral reefs as drivers of cladogenesis: expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots. Journal of Evolutionary Biology, 24 (12). pp. 2543-2562.

Messmer, Vanessa, Jones, Geoffrey P., Munday, Philip L., Holbrook, Sally J., Schmitt, Russell J., and Brooks, Andrew J. (2011) Habitat biodiversity as a determinant of fish community structure on coral reefs. Ecology, 92 (12). pp. 2285-2298.

Jones, D.B., Zenger, K.R., and Jerry, D.R. (2011) In silico whole-genome EST analysis reveals 2322 novel microsatellites for the silver-lipped pearl oyster, Pinctada maxima. Marine Genomics, 4 (4). pp. 287-290.

Clague, Gillian E., Cheney, Karen L., Goldizen, Anne W., McCormick, Mark I., Waldie, Peter A., and Grutter, Alexandra S. (2011) Long-term cleaner fish presence affects growth of a coral reef fish. Biology Letters, 7 (6). pp. 863-865.

Littman, Raechel, Willis, Bette L., and Bourne, David G. (2011) Metagenomic analysis of the coral holobiont during a natural bleaching event on the Great Barrier Reef. Environmental Microbiology Reports, 3 (6). pp. 651-660.

Vail, Alexander L., and McCormick, Mark I. (2011) Metamorphosing reef fishes avoid predator scent when choosing a home. Biology Letters, 7 (6). pp. 921-924.

Dixson, D.L., Munday, P.L., Pratchett, M., and Jones, G.P. (2011) Ontogenetic changes in responses to settlement cues by anemonefish. Coral Reefs, 30 (4). pp. 903-910.

Wenger, Amelia S., Johansen, J.L., and Jones, G.P. (2011) Suspended sediment impairs habitat choice and chemosensory discrimination in two coral reef fishes. Coral Reefs, 30 (4). pp. 879-887.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Pratchett, Morgan S., Srinivasan, Maya, Planes, Serge, and Thorrold, Simon R. (2011) Terrestrial chemical cues help coral reef fish larvae locate settlement habitat surrounding islands. Ecology and Evolution, 1 (4). pp. 586-595.

Webster, Nicole S., Botté, Emmanuelle S., Soo, Rochelle M., and Whalan, Steve (2011) The larval sponge holobiont exhibits high thermal tolerance. Environmental Microbiology Reports, 3 (6). pp. 756-762.

Ferrari, Maude C.O., McCormick, Mark I., Munday, Philip L., Meekan, Mark G., Dixson, Danielle L., Lonnstedt, Öona, and Chivers, Douglas P. (2011) Putting prey and predator into the CO2 equation – qualitative and quantitative effects of ocean acidification on predator–prey interactions. Ecology Letters, 14 (11). pp. 1143-1148.

Shaddick, K., Burridge, C.P., Jerry, D.R., Schwartz, T.S., Truong, K., Gilligan, D.M., and Beheregaray, L.B. (2011) A hybrid zone and bidirectional introgression between two catadromous species: Australian bass Macquaria novemaculeata and estuary perch Macquaria colonorum. Journal of Fish Biology, 79 (5). pp. 1214-1235.

Goatley, Christopher H.R., and Bellwood, David R. (2011) The roles of dimensionality, canopies and complexity in ecosystem monitoring. PLoS ONE, 6 (11). e27307. pp. 1-8.

Foale, Simon, Cohen, Philippa, Januchowski-Hartley, Stephanie, Wenger, Amelia, and Macintyre, Martha (2011) Tenure and taboos: origins and implications for fisheries in the Pacific. Fish and Fisheries, 12 (4). pp. 357-369.

Pollock, F. Joseph, Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2011) The urgent need for robust coral disease diagnostics. PLoS Pathogens, 7 (10). e1002183. pp. 1-10.

Hoogenboom, M.O., Connolly, S.R., and Anthony, K.R.N. (2011) Biotic and abiotic correlates of tissue quality for common scleractinian corals. Marine Ecology Progress Series, 438. pp. 119-128.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2011) Connectivity dominates larval replenishment in a coastal reef fish metapopulation. Proceedings of the Royal Society of London Series B, Biological Sciences, 278 (1720). pp. 2954-2961.

Kenkel, Carly D., Aglyamova, Galina, Alamaru, Ada, Bhagooli, Ranjeet, Capper, Roxanna, Cunning, Ross, de Villiers, Amanda, Haslun, Joshua A., Hédouin, Laetitia, Keshavmurthy, Shashank, Kuehl, Kristin A., Mahmoud, Huda, McGinty, Elizabeth S., Montoya-Maya, Phanor H., Palmer, Caroline V., Pantile, Raffaella, Sánchez, Juan A., Schils, Tom, Silverstein, Rachel N., Squiers, Logan B., Tang, Pei-Ciao, Goulet, Tamar L., and Matz, Mikhail V. (2011) Development of gene expression markers of acute heat-light stress in reef-building corals of the genus Porites. PLoS ONE, 6 (10). e26914. pp. 1-9.

Miller, Penny A., Fitch, Alison J., Gardner, Michael, Hutson, Kate S., and Mair, Graham (2011) Genetic population structure of Yellowtail Kingfish (Seriola lalandi) in temperate Australasian waters inferred from microsatellite markers and mitochondrial DNA. Aquaculture, 319 (3-4). pp. 328-336.

Fox, Rebecca J., and Bellwood, David R. (2011) Unconstrained by the clock? Plasticity of diel activity rhythm in a tropical reef fish, Siganus lineatus. Functional Ecology, 25 (5). pp. 1096-1105.

Lamb, Joleah B., and Willis, Bette L. (2011) Using coral disease prevalence to assess the effects of concentrating tourism activities on offshore reefs in a tropical marine park. Conservation Biology, 25 (5). pp. 1044-1052.

Palmer, C.V., Bythell, J.C., and Willis, B.L. (2011) A comparative study of phenoloxidase activity in diseased and bleached colonies of the coral Acropora millepora. Developmental and Comparative Immunology, 35 (10). pp. 1098-1101.

Brooker, R.M., Munday, P.L., and Jones, G.P. (2011) Coral obligate filefish masquerades as branching coral. Coral Reefs, 30 (3). p. 803.

Young, M.A.L., and Bellwood, D.R. (2011) Diel patterns in sea urchin activity and predation on sea urchins on the Great Barrier Reef. Coral Reefs, 30 (3). pp. 729-736.

Pankhurst, Ned, and Munday, Philip (2011) Effects of climate change on fish reproduction and early life history stages. Marine and Freshwater Research, 62 (9). pp. 1015-1026.

Sato, Y., Bourne, D.G., and Willis, B.L. (2011) Effects of temperature and light on the progression of black band disease on the reef coral, Montipora hispida. Coral Reefs, 30 (3). pp. 753-761.

Konow, Nicolai, and Bellwood, David R. (2011) Evolution of high trophic diversity based on limited functional disparity in the feeding apparatus of marine angelfishes (f. Pomacanthidae). PLoS ONE, 6 (9). e24113. pp. 1-11.

Mitchell, Matthew D., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2011) Friend or foe? The role of latent inhibition in predator and non-predator labelling by coral reef fishes. Animal Cognition, 14 (5). pp. 707-714.

Tziouveli, Vasiliki, Bastos-Gomez, Giana, and Bellwood, Orpha (2011) Functional morphology of mouthparts and digestive system during larval development of the cleaner shrimp Lysmata amboinensis (de Man, 1888). Journal of Morphology, 272 (9). pp. 1080-1091.

Broderick, D., Ovenden, J.R., Buckworth, R.C., Newman, S.J., Lester, R.J.G., and Welch, D.J. (2011) Genetic population structure of grey mackerel Scomberomorus semifasciatus in northern Australia. Journal of Fish Biology, 79 (3). pp. 633-661.

Lönnstedt, O.M., and McCormick, M.I. (2011) Growth history and intrinsic factors influence risk assessment at a critical life transition for a fish. Coral Reefs, 30 (3). pp. 805-812.

Johansen, J.L., and Jones, G.P. (2011) Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17 (9). pp. 2971-2979.

Bay, Line Kolind, Cumbo, Vivian Ruth, Abrego, David, Kool, Johnathan Travis, Ainsworth, Tracy Danielle, and Willis, Bette Lynn (2011) Infection dynamics vary between Symbiodinium types and cell surface treatments during establishment of endosymbiosis with coral larvae. Diversity, 3 (3). pp. 356-374.

Ferrari, Maud C.O., Dixson, Danielle L., Munday, Philip L., McCormick, Mark I., Meekan, Mark G., Sih, Andrew, and Chivers, Douglas P. (2011) Intrageneric variation in antipredator responses of coral reef fishes affected by ocean acidification: implications for climate change projections on marine communities. Global Change Biology, 17 (9). pp. 2980-2986.

Carl, C., Poole, A.J., Vucko, M.J., Williams, M.R., Whalan, S., and de Nys, R. (2011) Optimising settlement assays of pediveligers and plantigrades of Mytilus galloprovincialis. Biofouling, 27 (8). pp. 859-868.

Hisano, Mizue, Connolly, Sean R., and Robbins, William D. (2011) Population growth rates of reef sharks with and without fishing on the Great Barrier Reef: robust estimation with multiple models. PLoS ONE, 6 (9). e25028. pp. 1-10.

Gribben, Paul E., Jeffs, Andrew G., de Nys, Rocky, and Steinberg, Peter D. (2011) Relative importance of natural cues and substrate morphology for settlement of the New Zealand Greenshell™ mussel, Perna canaliculus. Aquaculture, 319 (1-2). pp. 240-246.

Eriksen, M.S., Færevik, G., Kittilsen, S., McCormick, M.I., Damsgård, B., Braithwaite, V.A., Braastad, B.O., and Bakken, M. (2011) Stressed mothers - troubled offspring: a study of behavioural maternal effects in farmed Salmo salar. Journal of Fish Biology, 79 (3). pp. 575-586.

Morgan, Jess A.T., Welch, David J., Harry, Alistair V., Street, Raewyn, Broderick, Damien, and Ovenden, Jennifer R. (2011) A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis. Molecular Ecology, 11 (5). pp. 813-819.

Cetina-Heredia, Paulina, and Connolly, Sean R. (2011) A simple approximation for larval retention around reefs. Coral Reefs, 30 (3). pp. 593-605.

Price, Ian R. (2011) A taxonomic revision of the marine green algal genera Caulerpa and Caulerpella (Chlorophyta, Caulerpaceae) in northern (tropical and subtropical) Australia. Australian Systematic Botany, 24 (3). pp. 137-213.

Palmer, Caroline V., Traylor-Knowles, Nikki G., Willis, Bette L., and Bythell, John C. (2011) Corals use similar immune cells and wound-healing processes as those of higher organisms. PLoS ONE, 6 (8). e23992. pp. 1-11.

Hardy, Christopher M., Adams, Mark, Jerry, Dean R., Court, Leon N., Morgan, Matthew J., and Hartley, Diana M. (2011) DNA barcoding to support conservation: species identification, genetic structure and biogeography of fishes in the Murray-Darling River Basin, Australia. Marine and Freshwater Research, 62 (8). pp. 887-901.

Renfree, Marilyn B., Papenfuss, Anthony T., Deakin, Janine E., Lindsay, James, Heider, Thomas, Belov, Katherine, Rens, Willem, Waters, Paul D., Pharo, Elizabeth A., Shaw, Geoff, Wong, Emily S.W., Lefèvre, Christopher P., Nicholas, Kevin R., Kuroki, Yoko, Wakefield, Matthew J., Zenger, Kyall R., Wang, Chenwei , Ferguson-Smith, Malcolm, Nicholas, Frank W., Hickford, Danielle, Yu, Hongshi, Short, Kirsty R., Siddle, Hannah V., Frankenberg, Stephen R., Chew, Keng Y., Menzies, Brandon R., Stringer, Jessica M., Suzuki, Shunsuke, Hore, Timothy A., Delbridge, Margaret L., Mohammadi, Amir, Schneider, Nanette Y., Hu, Yanqiu, O'Hara, William, Al Nadaf, Shafagh , Wu, Chen, Feng, Zhi-Ping, Cocks, Benjamin G., Wang, Jianghui, Flicek, Paul, Searle, Stephen M.J., Fairley, Susan, Beal, Kathryn, Herrero, Javier, Carone, Dawn M., Suzuki, Yutaka, Kondo, Shinji, Nishida, Yuichiro, Tatsumoto, Shoji, Mandiou, Ion, Hsu, Arthur, McColl, Kaighin A., Lansdell, Benjamin, Weinstock, George, Kuczek, Elizabeth, McGrath, Annette, Wilson, Peter, Men, Artem , Hazar-Rethinam, Mehlika, Hall, Allison, Davis, John, Wood, David, Williams, Sarah, Sundaravadanam, Yogi, Muzny, Donna M., Jhangiani, Shalini N., Lewis, Lora R., Morgan, Margaret B., Okwuonu, Geoffrey O., Ruiz, San J., Santibanez, Jireh, Nazareth, Lynne, Cree, Andrew, Fowler, Gerard, Kovar, Christie L., Dinh, Huyen H., Joshi, Vandita, Jing, Chyn, Lara, Fremiet, Thornton, Rebecca, Chen, Lei, Deng, Jixin, Liu, Yue, Shen, Joshua Y., Song, Xing-Zhi, Edson, Janette, Troon, Carmen, Thomas, Daniel, Stephens, Amber, Yapa, Lankesha, Levchenko, Tanya, Gibbs, Richard A., Cooper, Desmond W., Speed, Terence P., Fujiyama, Asao, Sugano, Sumio, Graves, Jennifer A.M., O'Neill, Rachel J., Pask, Andrew J., Forrest, Susan M., Toyoda, Atsushi, Sakaki, Yoshiyuki, and Worley, Kim C. (2011) Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development. Genome Biology, 12 (8). R81. pp. 1-25.

Wang, Chenwei, Deakin, Janine E., Rens, Willem, Zenger, Kyall R., Belov, Katherine, Marshall Graves, Jennifer A., and Nicholas, Frank W. (2011) A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map. BMC Genomics, 12. 422. pp. 1-12.

Wang, Chenwei, Webley, Lee, Wei, Ke-jun, Wakefield, Matthew J., Patel, Hardip R., Deakin, Janine E., Alsop, Amber, Marshall Graves, Jennifer A., Cooper, Desmond W., Nicholas, Frank W., and Zenger, Kyall R. (2011) A second-generation anchored genetic linkage map of the tammar wallaby (Macropus eugenii). BMC Genetics, 12. 72. pp. 1-16.

De Santis, Christian, Wade, Nicholas M., Jerry, Dean R., Preston, Nigel P., Glencross, Brett D., and Sellars, Melony J. (2011) Growing backwards: an inverted role for the shrimp ortholog of vertebrate myostatin and GDF11. Journal of Experimental Biology, 214 (16). pp. 2671-2677.

Lönnstedt, Oona M., and McCormick, Mark I. (2011) Chemical alarm cues inform prey of predation threat: the importance of ontogeny and concentration in a coral reef fish. Animal Behaviour, 82 (2). pp. 213-218.

Moorhead, Jonathan A., and Zeng, Chaoshu (2011) Breeding of the forktail blenny Meiacanthus atrodorsalis: broodstock management and larval rearing. Aquaculture, 318 (1-2). pp. 248-252.

Romano, Nicholas, and Zeng, Chaoshu (2011) Importance of balanced Na+/K+ ratios for blue swimmer crabs, Portunus pelagicus, to cope with elevated ammonia-N and differences between in vitro and in vivo gill Na+/K+-ATPase responses. Aquaculture, 318 (1-2). pp. 154-161.

Ovenden, Jennifer R., Morgan, Jess A.T., Street, Raewyn, Tobin, Andrew, Simpfendorfer, Colin, Macbeth, William, and Welch, David (2011) Negligible evidence for regional genetic population structure for two shark species Rhizoprionodon acutus (Rüppell, 1837) and Sphyrna lewini (Griffith & Smith, 1834) with contrasting biology. Marine Biology, 158 (7). pp. 1497-1509.

Cripps, Ingrid, Munday, Philip L., and McCormick, Mark I. (2011) Ocean acidification affects prey detection by a predatory reef fish. PLoS One, 6 (7). e22736. pp. 1-7.

Todd, Erica, Blair, David, Hamann, Mark, and Jerry, Dean (2011) Twenty-nine microsatellite markers for two Australian freshwater turtles, Elseya albagula and Emydura macquarii krefftii: development from 454-sequence data and utility in related taxa. Conservation Genetics Resources, 3 (3). pp. 449-456.

Beukers-Stewart, B.D., Beukers-Stewart, J.S, and Jones, G.P. (2011) Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs, 30 (3). pp. 855-864.

Stella, Jessica S., Pratchett, Morgan S., Hutchings, Pat A., and Jones, Geoffrey P. (2011) Coral-associated invertebrates: diversity, ecology importance and vulnerability to disturbance. Oceanography and Marine Biology: an annual review, 49. pp. 43-104.

McGinty, Erin L., Zenger, Kyall R., Taylor, Joseph U.U., Evans, Brad S., and Jerry, Dean R. (2011) Diagnostic genetic markers unravel the interplay between host and donor oyster contribution in cultured pearl formation. Aquaculture, 316 (1-4). pp. 20-24.

Bellwood, D.R., and Choat, J.H. (2011) Dangerous demographics: the lack of juvenile humphead parrotfishes Bolbometopon muricatum on the Great Barrier Reef. Coral Reefs, 30 (2). pp. 549-554.

Harry, Alastair V., Tobin, Andrew J., Simpfendorfer, Colin A., Welch, David J., Mapleston, Amos, White, Jimmy, Williams, Ashley J., and Stapley, Jason (2011) Evaluating catch and mitigating risk in a multispecies, tropical, inshore shark fishery within the Great Barrier Reef World Heritage Area. Marine and Freshwater Research, 62 (6). pp. 710-721.

Grutter, Alexandra S., Crean, Angela J., Curtis, Lynda M., Kuris, Armand M., Warner, Robert R., and McCormick, Mark I. (2011) Indirect effects of an ectoparasite reduce successful establishment of a damselfish at settlement. Functional Ecology, 25 (3). pp. 586-594.

Abdul Wahab, M.A., De Nys, R., and Whalan, S. (2011) Larval behaviour and settlement cues of a brooding coral reef sponge. Coral Reefs, 30 (2). pp. 451-460.

Horne, John B., Momigliano, Paolo, Welch, David J., Newman, Stephen J., and van Herwerden, Lynne (2011) Limited ecological population connectivity suggests low demands on self-recruitment in a tropical inshore marine fish (Eleutheronema tetradactylum: Polynemidae). Molecular Ecology, 20 (11). pp. 2291-2306.

Ceccarelli, Daniela, Beger, Maria, Kospartov, Marie, Richards, Zoe, and Birrell, Chico (2011) Population trends of remote invertebrate resources in a marine reserve: trochus and holothurians at Ashmore Reef. Pacific Conservation Biology, 17 (2). pp. 132-140.

Karlson, Ronald H., Connolly, Sean R., and Hughes, Terence P. (2011) Spatial variance in abundance and occupancy of corals across broad geographic scales. Ecology, 92 (6). pp. 1282-1291.

Bonaldo, R.M., and Bellwood, D.R. (2011) Spatial variation in the effects of grazing on epilithic algal turfs on the Great Barrier Reef, Australia. Coral Reefs, 30 (2). pp. 381-390.

Fraser, M.R., and de Nys, R. (2011) A quantitative determination of deformities in barramundi (Lates calcarifer; Bloch) fed a vitamin deficient diet. Aquaculture Nutrition, 17 (3). pp. 235-243.

Beattie, Andrew J., Hay, Mark, Magnusson, Bill, de Nys, Rocky, Smeathers, James, and Vincent, Julian F.V. (2011) Ecology and bioprospecting. Austral Ecology, 36 (3). pp. 341-356.

Barnett, Adam, Abrantes, Kátya G., Stevens, John D., and Semmens, Jayson M. (2011) Site fidelity and sex-specific migration in a mobile apex predator: implications for conservation and ecosystem dynamics. Animal Behaviour, 81 (5). pp. 1039-1048.

Miller, David A., Choat, John Howard, Clements, Kendall D., and Angert, Esther R. (2011) The spoIIE homolog of Epulopiscium sp. type B is expressed early in intracellular offspring development. Journal of Bacteriology, 193 (10). pp. 2642-2646.

Donelson, Jennifer M., Munday, Philip, Mccormick, Mark I., and Nilsson, Göran E. (2011) Acclimation to predicted ocean warming through developmental plasticity in a tropical reef fish. Global Change Biology, 17 (4). pp. 1712-1719.

Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.

Le Vay, Lewis, Shelley, Colin, Zeng, Chaoshu, and Sorgeloos, Patrick (2011) International symposium on aquaculture, biology and management of commercially important crabs, Shanghai (China), 8–11 November 2009 (ISABMC-2009). Aquaculture International, 19 (2). pp. 215-216.

De Santis, Christian, Smith-Keune, Carolyn, and Jerry, Dean R. (2011) Normalizing RT-qPCR data: are we getting the right answers? An appraisal of normalization approaches and internal reference genes from a case study in the Finfish Lates calcarifer. Marine Biotechnology, 13 (2). pp. 170-180.

Dickens, Luke C., Goatley, Christopher H.R., Tanner, Jennifer K., and Bellwood, David R. (2011) Quantifying relative diver effects in underwater visual censuses. PLoS One, 6 (4). e18965. pp. 1-8.

De Santis, C., and Jerry, D.R. (2011) Differential tissue-regulation of myostatin genes in the teleost fish Lates calcarifer in response to fasting. Evidence for functional differentiation. Molecular and Cellular Endocrinology, 335 (2). 158-165 .

Bennett, S., and Bellwood, D.R. (2011) Latitudinal variation in macroalgal consumption by fishes on the Great Barrier Reef. Marine Ecology Progress Series, 426. pp. 241-252.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Kingsford, Michael, Smith, Felicity, and Flood, M.J. (2011) Growth and pelagic larval duration of presettlement and newly settled neon damselfish, Pomacentrus coelestis, at multiple spatial scales. Coral Reefs, 30 (1). pp. 203-214.

Bonaldo, R.M., and Bellwood, D.R. (2011) Parrotfish predation on massive Porites on the Great Barrier Reef. Coral Reefs, 30 (1). pp. 259-269.

Trip, E.D.L., Clements, K.D., Raubenheimer, D., and Choat, J.H. (2011) Reproductive biology of an odacine labrid, Odax pullus. Journal of Fish Biology, 78 (3). pp. 741-761.

Holmes, Thomas H., and McCormick, Mark I. (2011) Response across a gradient: behavioural reactions of newly settled fish to predation cues. Animal Behaviour, 81 (3). pp. 543-550.

Moore, B.R., Stapley, J., Allsop, Q., Newman, S.J., Ballagh, A., Welch, D.J., and Lester, R.J.G. (2011) Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia, as indicated by parasites. Journal of Fish Biology, 78 (3). pp. 923-936.

Hoey, Andrew S., and Bellwood, David R. (2011) Suppression of herbivory by macroalgal density: a critical feedback on coral reefs? Ecology Letters, 14 (3). pp. 267-273.

Aeby, Greta S., Williams, Gareth J., Franklin, Erik C., Haapkyla, Jessica, Harvell, C. Drew, Neale, Stephen, Page, Cathie A., Raymundo, Laurie, Vargas-Ángel, Bernardo, Willis, Bette L., Work, Thierry M., and Davy, Simon K. (2011) Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific. PLoS ONE, 6 (2). e16887. pp. 1-9.

Bannister, Raymond, Hoogenboom, Mia, Anthony, Kenneth R. N., Battershill, Chris, Whalan, Stephen, Webster, Nicole, and De Nys, Rocky (2011) Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series, 423. pp. 95-100.

Munday, Philip L., Gagliano, Monica, Donelson, Jennifer M., Dixson, Danielle L., and Thorrold, Simon (2011) Ocean acidification does not affect the early life history development of a tropical marine fish. Marine Ecology Progress Series, 423. pp. 211-221.

Haapkylä, Jessica, Unsworth, Richard K.F., Flavell, Mike, Bourne, David G., Schaffelke, Britta, and Willis, Bette L. (2011) Seasonal rainfall and runoff promote coral disease on an inshore reef. PLoS ONE, 6 (2). e16893. pp. 1-10.

Shaddick, Kim, Gilligan, Dean M., Burridge, Christopher P., Jerry, Dean R., Truong, Kiet, and Beheregaray, Luciano B. (2011) Historic divergence with contemporary connectivity in a catadromous fish, the estuary perch (Macquaria colonorum). Canadian Journal of Fisheries and Aquatic Sciences, 68 (2). pp. 304-318.

Wu, Xugan, Wang, Zongkai, Cheng, Yong Xu, Zeng, Chaoshu, Yang, Xiaozhen, and Lu, Jianfeng (2011) Effects of dietary phospholipids and highly unsaturated fatty acids on the precocity, survival, growth and hepatic lipid composition of juvenile Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 457-468.

Hasbi, Ghitarina, de Nys, Rocky, Burns, Kathryn, Whalan, Stephen, and Dunlap, Walter C. (2011) Hepatic coenzyme Q redox balance of fishes as a potential bioindicator of environmental contamination by polycyclic aromatic hydrocarbons. Biology Letters, 7 (1). pp. 123-126.

Liu, Zhijun, Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, and Yang, Xiaozhen (2011) Ovarian re-maturation following the first spawning in the Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 417-426.

Bonaldo, R.M., Krajewski, P.J., and Bellwood, D.R. (2011) Relative impact of parrotfish grazing scars on massive Porites corals at Lizard Island, Great Barrier Reef. Marine Ecology Progress Series, 423. pp. 223-233.

Veilleux, Heather D., van Herwerden, Lynne, Evans, Richard D. , Travers, Michael J. , and Newman, Stephen J. (2011) Strong genetic subdivision generates high genetic variability among eastern and western Australian populations of Lutjanus carponotatus (Richardson). Fisheries Research, 108 (1). pp. 74-80.

Gagliano, M., Lema, A.K., Depczynski, M., and Whalan, S. (2011) Use it and lose it: lipofuscin accumulation in the midbrain of a coral reef fish. Journal of Fish Biology, 78 (2). pp. 659-666.

Bird, Michael I., Wurster, Christopher M., de Paula Silva, Pedro H., Bass, Adrian M., and de Nys, Rocky (2011) Algal biochar: production and properties. Bioresource Technology, 102 (2). 1886- 1891.

Mitchell, Matthew D., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2011) Coral reef fish rapidly learn to identify multiple unknown predators upon recruitment to the reef. PLoS ONE, 6 (1). e15764. pp. 1-6.

Russ, Garry R., and Alcala, Angel C. (2011) Enhanced biodiversity beyond marine reserve boundaries: the cup spillith over. Ecological Applications, 21 (1). pp. 241-250.

Scardino, Andrew J., and de Nys, Rocky (2011) Mini review: biomimetic models and bioinspired surfaces for fouling control. Biofouling, 27 (1). pp. 73-86.

Hutson, K.S., Brock, E.L., and Steer, M.A. (2011) Spatial variation in parasite abundance: evidence of geographical population structuring in southern garfish Hyporhamphus melanochir. Journal of Fish Biology, 78 (1). pp. 166-182.

Catalano, Sarah R., Hutson, Kate S., Ratcliff, Rodney M., and Whittington, Ian D. (2011) The value of host and parasite identification for arripid fish. Marine and Freshwater Research, 62 (1). pp. 72-82.

Bonin, Mary C., Almany, Glenn R., and Jones, Geoffrey P. (2011) Contrasting effects of habitat loss and fragmentation on coral-associated reef fishes. Ecology, 92 (7). pp. 1503-1512.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2011) Detrimental effects of host anemone bleaching on anemonefish populations. Coral Reefs, 30 (2). pp. 497-506.

Januchowski-Hartley, Stephanie, VanDerWal, Jeremy, and Sydes, Damon (2011) Effective control of aquatic invasive species in tropical Australia. Environmental Management, 48 (3). pp. 568-576.

Ballagh, D.A., Pankhurst, P.M., and Fielder, D.S. (2011) Embryonic development of mulloway, Argyrosomus japonicus, and egg surface disinfection using ozone. Aquaculture, 318 (3-4). pp. 475-478.

Scaps, P, and Haapkyla, J (2011) Focal white spots on Porites spp. from the north Andaman Sea, Western Thailand and the Wakatobi Marine National Park, Indonesia. Galaxea, Journal of Coral Reef Studies, 13. pp. 3-4.

Miller, Emily J., Eldridge, Mark D.B., Morris, Keith D., Zenger, Kyall R., and Herbert, Catherine A. (2011) Genetic consequences of isolation: island tammar wallaby (Macropus eugenii) populations and the conservation of threatened species. Conservation Genetics, 12 (6). pp. 1619-1631.

Miller-Sims, Vanessa C., Atema, Jelle, Gerlach, Gabriele, and Kingsford, Michael (2011) How stable are the reef odor preferences of settling reef fish larvae? Marine and Freshwater Behaviour and Physiology, 44 (3). pp. 133-141.

Ballagh, Aaron C., Welch, David, Williams, Ashley J., Mapleston, Amos, Tobin, Andrew, and Marton, Nicholas (2011) Integrating methods for determining length-at-age to improve growth estimates for two large scombrids. Fishery Bulletin, 109 (1). pp. 90-100.

Abrantes, Kátya G., and Barnett, Adam (2011) Intrapopulation variations in diet and habitat use in a marine apex predator, the broadnose sevengill shark Notorynchus cepedianus. Marine Ecology Progress Series, 442. pp. 133-148.

Krajewski, João Paulo, Floeter, Sergio R., Jones, Geoffrey P., and Leite, Fosca P.P (2011) Patterns of variation in behaviour within and among reef fish species on an isolated tropical island: influence of exposure and substratum. Journal of the Marine Biological Association of the United Kingdom, 91 (Special Issue 6). pp. 1359-1368.

Gaither, Michelle R., Bowen, Brian W., Bordenave, Tiane-Rae, Rocha, Luiz A., Newman, Stephen J., Gomez, Juan A., van Herwerden, Lynne, and Craig, Matthew T. (2011) Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the indo-pacific barrier with contemporary overlap in the coral triangle. BMC Evolutionary Biology, 11. 189. pp. 1-15.

Maynard, J.A., Anthony, K.R.N., Harvell, C.D., Burgman, M.A., Beeden, R., Sweatman, H., Heron, S.F., Lamb, J.B., and Willis, B.L. (2011) Predicting outbreaks of a climate-driven coral disease in the Great Barrier Reef. Coral Reefs, 30 (2). pp. 485-495.

Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J., and Cohen, Anne L. (2011) Projecting coral reef futures under global warming and ocean acidification. Science, 333 (6041). pp. 418-422.

Trip, E.D.L., Raubenheimer, D., Clements, K.D., and Choat, J.H. (2011) Reproductive demography of a temperate protogynous and herbivorous fish, Odax pullus (Labridae, Odacini). Marine and Freshwater Research, 62 (2). pp. 176-186.

Milione, Michael, and Southgate, Paul (2011) Seasonal changes in recruitment of Pteria penguin in North Queensland, Australia. Journal of Shellfish Research, 30 (1). pp. 89-94.

Chong-Seng, K.M., Cole, A.J., Pratchett, M.S., and Willis, B.L. (2011) Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease. Coral Reefs, 30 (2). pp. 473-481.

Hughes, T.P., Bellwood, D.R., Baird, A.H., Brodie, J., Bruno, J.F., and Pandolfi, J.M. (2011) Shifting base-lines, declining coral cover, and the erosion of reef resilience: comment on Sweatman et al. (2011). Coral Reefs, 30 (3). pp. 653-660.

Clode, P.L., Lema, K., Saunders, M., and Weiner, S. (2011) Skeletal mineralogy of newly settling Acropora millepora (Scleractinia) coral recruits. Coral Reefs, 30 (1). pp. 1-8.

Moore, B.R., Welch, D.J., and Simpfendorfer, C.A. (2011) Spatial patterns in the demography of a large estuarine teleost: king threadfin, Polydactylus macrochir. Marine and Freshwater Research, 62 (8). pp. 937-951.

Newman, S.J., Pember, M.B., Rome, B.M., Mitsopoulos, G.E.A., Skepper, C.L., Allsop, Q., Saunders, T., Ballagh, A.C., van Herwerden, L., Garrett, R.N., Gribble, N.A., Stapley, J.M., Meeuwig, J.J., Moore, B.R., and Welch, D.J. (2011) Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia as inferred from stable isotopes in sagittal otolith carbonate. Fisheries Management and Ecology, 18 (3). pp. 246-257.

Lefèvre, Carine D., and Bellwood, David R. (2011) Temporal variation in coral reef ecosystem processes: herbivory of macroalgae by fishes. Marine Ecology Progress Series, 422. pp. 239-251.

Paoli, Gary D., Yaap, Betsy, Wells, Phillip L., and Sileuw, Aisyah (2010) CSR, oil palm and the RSPO: translating boardroom philosophy into conservation action on the ground. Tropical Conservation Science, 3 (4). pp. 438-446.

Newman, Stephen J., Allsop, Quentin, Ballagh, Aaron C., Garrett, Rod N., Gribble, Neil, Meeuwig, Jessica J., Mitsopoulos, Gabby E.A., Moore, Bradley R., Pember, Matthew B., Rome, Ben M., Saunders, Thor, Skepper, Craig L., Stapley, Jason M., van Herwerden, Lynne, and Welch, David J. (2010) Variation in stable isotope (δ18O and δ13C) signatures in the sagittal otolith carbonate of king threadfin, Polydactylus macrochir across northern Australia reveals multifaceted stock structure. Journal of Experimental Marine Biology and Ecology, 396 (1). pp. 53-60.

Done, T.J., DeVantier, L.M., Turak, E., Fisk, D.A., Wakeford, M., and van Woesik, R. (2010) Coral growth on three reefs: development of recovery benchmarks using a space for time approach. Coral Reefs, 29 (4). pp. 815-833.

Slater, M.J., Carton, A.G., and Jeffs, A.G. (2010) Highly localised distribution patterns of juvenile sea cucumber Australostichopus mollis. New Zealand Journal of Marine and Freshwater Research, 44 (4). pp. 201-216.

Weeks, Rebecca, Russ, Garry R., Bucol, Abner A., and Alcala, Angel C. (2010) Incorporating local tenure in the systematic design of marine protected area networks. Conservation Letters, 3 (6). pp. 445-453.

Berumen, M. L, Walsh, H.J., Raventos, N., Planes, S., Jones, G.P., Starczak, V., and Thorrold, S.R. (2010) Otolith geochemistry does not reflect dispersal history of clownfish larvae. Coral Reefs, 29 (4). pp. 883-891.

Abesamis, R.A., and Russ, G.R. (2010) Patterns of recruitment of coral reef fishes in a monsoonal environment. Coral Reefs, 29 (4). pp. 911-921.

Gardiner, N.M., and Jones, G.P. (2010) Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish. Coral Reefs, 29 (4). pp. 845-856.

Magnusson, Marie, Heimann, Kirsten, Quayle, Pamela, and Negri, Andrew P. (2010) Additive toxicity of herbicide mixtures and comparative sensitivity of tropical benthic microalgae. Marine Pollution Bulletin, 60 (11). pp. 1978-1987.

McCook, Laurence, Ayling, Anthony, Cappo, Mike, Choat, J. Howard, Evans, Richard D., De Freitas, Debora M., Heupel, Michelle, Hughes, Terry P., Jones, Geoffrey P., Mapstone, Bruce, Marsh, Helene, Mills, Morena, Molloy, Fergus J., Pitcher, C. Roland, Pressey, Robert L., Russ, Garry R., Sutton, Stephen, Sweatman, Hugh, Tobin, Renae, Wachenfeld, David R., and Williamson, David H. (2010) Adaptive management of the Great Barrier Reef: A globally significant demonstration of the benefits of networks of marine reserves. Proceedings of the National Academy of Sciences of the United States of America, 107 (43). 18278- 18285.

Babcock, R.C., Shears, N.T., Alcala, A.C., Barrett, N.S., Edgar, G.J., Lafferty, K.D., McClanahan, T.R., and Russ, G.R. (2010) Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects. Proceedings of the National Academy of Sciences of the United States of America, 107 (43). pp. 18256-18261.

Huerlimann, Roger, De Nys, Rocky, and Heimann, Kirsten (2010) Growth, lipid content, productivity, and fatty acid composition of tropical microalgae for scale-up production. Biotechnology and Bioengineering, 107 (2). pp. 245-257.

Gardiner, Naomi M., Munday, Philip L., and Nilsson, Göran E. (2010) Counter-gradient variation in respiratory performance of coral reef fishes at elevated temperatures. PLoS ONE, 5 (10). e13299. pp. 1-13.

Price, Samantha A., Wainwright, Peter C., Bellwood, David R., Kazancioglu, Erem, Collar, David C., and Near, Thomas J. (2010) Functional innovations and morphological diversification in parrotfish. Evolution, 64 (10). pp. 3057-3068.

Camus, Thomas, and Zeng, Chaoshu (2010) Roles of microalgae on total egg production over female lifespan and egg incubation time, naupliar and copepodite survival, sex ratio and female life expectancy of the copepod Bestiolina similis. Aquaculture Research, 41 (11). pp. 1717-1726.

Goatley, Christopher H.R., and Bellwood, David R. (2010) Biologically mediated sediment fluxes on coral reefs: sediment removal and off-reef transportation by the surgeonfish Ctenochaetus striatus. Marine Ecology Progress Series, 415. pp. 237-245.

Booth, Mark A., Allan, Geoff L., and Pirozzi, Igor (2010) Estimation of digestible protein and energy requirements of yellowtail kingfish Seriola lalandi using a factorial approach. Aquaculture, 307 (3-4). pp. 247-259.

Johansson, C.L., Bellwood, D.R., and Depczynski, M. (2010) Sea urchins, macroalgae and coral reef decline: a functional evaluation of an intact reef system, Ningaloo, Western Australia. Marine Ecology Progress Series, 414. pp. 65-74.

Carton, Alexander G., and Vaughan, Melanie R. (2010) Behavioural and anatomical measures of visual acuity in first-feeding Yellowtail Kingfish (Seriola lalandi)larvae. Environmental Biology of Fishes, 89 (1). pp. 3-10.

Walker, Stefan P.W., Thibaut, Loïc, and McCormick, Mark I. (2010) Density-dependent sex ratio adjustment and the allee effect: a model and a test using a sex-changing fish. American Naturalist, 176 (3). pp. 312-321.

Luter, Heidi M., Whalan, Steve, and Webster, Nicole S. (2010) Exploring the role of microorganisms in the disease-like syndrome affecting the sponge Ianthella basta. Applied and Environmental Microbiology, 76 (17). pp. 5736-5744.

Robinson, Nicholas Andrew, Schipp, Glenn, Bosmans, Jérôme, and Jerry, Dean Robert (2010) Modelling selective breeding in protandrous, batch-reared Asian sea bass (Lates calcarifer, Bloch) using walkback selection. Aquaculture Research, 41 (10). e643-e655.

Almany, G.R., Hamilton, R.J., Williamson, D.H., Evans, R.D., Jones, G.P., Matawai, M., Potuku, T., Rhodes, K.L., Russ, G.R., and Sawynock, B. (2010) Research partnerships with local communities: two case studies from Papua New Guinea and Australia. Coral Reefs, 29 (3). pp. 567-576.

Slater, Matthew J., and Carton, Alexander G. (2010) Sea cucumber habitat differentiation and site retention as determined by intraspecific stable isotope variation. Aquaculture Research, 41 (10). pp. 695-702.

Ballagh, Debra A., Fielder, D. Stewart, and Pankhurst, Patricia M. (2010) Weaning requirements of larval mulloway, Argyrosomus japonicus. Aquaculture Research, 41 (10). e493-e504.

Heron, Scott F., Willis, Bette L., Skirving, William J., Eakin, C. Mark, Page, Cathie A., and Miller, Ian R. (2010) Summer hot snaps and winter conditions: modelling white syndrome outbreaks on Great Barrier Reef corals. PLoS ONE, 5 (8). e12210. pp. 1-11.

Russ, Garry R., and Alcala, Angel C. (2010) Decadal-scale rebuilding of predator biomass in Philippine marine reserves. Oecologia, 163 (4). pp. 1103-1106.

Webster, Nicole S., Taylor, Michael W., Behnam, Faris, Lücker, Sebastian, Rattei, Thomas, Whalan, Stephen, Horn, Matthias, and Wagner, Michael (2010) Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environmental Microbiology, 12 (8). pp. 2070-2082.

Pollock, F. Joseph, Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Detection and quantification of the coral pathogen vibrio coralliilyticus by real-time PCR with TaqMan fluorescent probes. Applied and Environmental Microbiology, 76 (15). pp. 5282-5286.

Winters, Kate L., van Herwerden, Lynne, Choat, J. Howard, and Robertson, D.R. (2010) Phylogeography of the Indo-Pacific parrotfish Scarus psittacus: isolation generates distinctive peripheral populations in two oceans. Marine Biology, 157 (8). pp. 1679-1691.

Gagliano, Monica, McCormick, Mark I., Moore, James A., and Depczynski, Martial (2010) The basics of acidification: baseline variability of pH on Australian coral reefs. Marine Biology, 157 (8). pp. 1849-1856.

Alva-Campbell, Yvette, Floeter, Sergio R., Robertson, D. Ross, Bellwood, David R., and Bernardi, Giacomo (2010) Molecular phylogenetics and evolution of Holacanthus angelfishes (Pomacanthidae). Molecular Phylogenetics and Evolution, 56 (1). pp. 456-461.

Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Jerry, Dean R. (2010) The consequences of differential family survival rates and equalizing maternal contributions on the effective population size (Ne) of cultured silver-lipped pearl oysters, Pinctada maxima. Aquaculture Research, 41 (8). pp. 1229-1242.

Hobbs, Jean-paul, and Van Herwerden, Lynne (2010) Evolutionary novelty at range edges for coral reef organisms. Science, 328 (5985). p. 1558.

Kvingedal, Renate, Evans, Brad S., Lind, Curtis E., Taylor, Joseph J.U., Dupont-Nivet, Mathilde, and Jerry, Dean R. (2010) Population and family growth response to different rearing location, heritability estimates and genotype×environment interaction in the silver-lip pearl oyster (Pinctada maxima). Aquaculture, 304 (1-4). pp. 1-6.

Penin, Lucie, Michonneau, François, Baird, Andrew H., Connolly, Sean R., Pratchett, Morgan S., Kayal, Mohsen, and Adjeroud, Mehdi (2010) Early post-settlement mortality and the structure of coral assemblages. Marine Ecology Progress Series, 408. pp. 55-64.

Bennett, S., Vergés, A., and Bellwood, D.R. (2010) Branching coral as a macroalgal refuge in a marginal coral reef system. Coral Reefs, 29 (2). pp. 471-480.

Hoey, A.S., and Bellwood, D.R. (2010) Cross-shelf variation in browsing intensity on the Great Barrier Reef. Coral Reefs, 29 (2). pp. 499-508.

Palmer, Caroline V., Bythell, John C., and Willis, Bette L. (2010) Levels of immunity parameters underpin bleaching and disease susceptibility of reef corals. FASEB Journal, 24 (6). pp. 1935-1946.

Jones, D.B., Jerry, D.R., McCormick, M.I., and Bay, L.K. (2010) The population genetic structure of a common tropical damselfish on the Great Barrier Reef and eastern Papua New Guinea. Coral Reefs, 29 (2). pp. 455-467.

McCormick, Mark I., and Meekan, Mark G. (2010) The importance of attitude: the influence of behaviour on survival at an ontogenetic boundary. Marine Ecology Progress Series, 407. pp. 173-185.

McCormick, Mark I., Ryen, Christopher A., Munday, Philip L., and Walker, Stefan P.W. (2010) Differing mechanisms underlie sexual size-dimorphism in two populations of a sex-changing fish. PLoS ONE, 5 (5). e10616. 1- 8.

Sheaves, Marcus, and Johnston, Ross (2010) Implications of spatial variability of fish assemblages for monitoring of Australia’s tropical estuaries. Aquatic Conservation: marine and freshwater ecosystems , 20 (3). pp. 348-356.

Crothers-Stomps, C., Høj, L., Bourne, D.G., Hall, M.R., and Owens, L. (2010) Isolation of lytic bacteriophage against Vibrio harveyi. Journal of Applied Microbiology, 108 (5). pp. 1744-1750.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Cui, Zhaoxia (2010) Reproductive performance and offspring quality of the first and the second brood of female swimming crab, Portunus Trituberculatus. Aquaculture, 303 (1-4). pp. 94-100.

Littman, Raechel A., Bourne, David G., and Willis, Bette L. (2010) Responses of coral-associated bacterial communities to heat stress differ with Symbiodinium type on the same coral host. Molecular Ecology, 19 (9). pp. 1978-1990.

Lefevre, Carine, and Bellwood, David (2010) Seasonality and dynamics in coral reef macroalgae: variation in condition and susceptibility to herbivory. Marine Biology, 157 (5). pp. 955-965.

Weeks, Rebecca, Russ, Garry R., Bucol, Abner A., and Alcala, Angel C. (2010) Shortcuts for marine conservation planning: the effectiveness of socioeconomic data surrogates. Biological Conservation, 143 (5). pp. 1236-1244.

Williams, Ashley J., Little, L. Richard, Punt, André E., Mapstone, Bruce D., Davies, Campbell R., and Heupel, Michelle R. (2010) Exploring movement patterns of an exploited coral reef fish when tagging data are limited. Marine Ecology Progress Series, 405. pp. 87-99.

Bannister, R.J., Battershill, C.N., and de Nys, R. (2010) Demographic variability and long-term change in a coral reef sponge along a cross-shelf gradient of the Great Barrier Reef. Marine and Freshwater Research, 61 (4). pp. 389-396.

Hobbs, Jean-Paul A., Ayling, Anthony, Choat, J. Howard, Gilligan, Justin J., McDonald, Christian A., Neilson, Joseph, and Newman, Stephen J. (2010) New records of marine fishes illustrate the biogeographic importance of Christmas Island, Indian Ocean. Zootaxa, 2422. pp. 63-68.

Yang, Xiaozhen, Wang, Jinfeng, Fan, Peng, Zhao, Liulan, Cheng, Yongxu, Wu, Xugan, and Zeng, Chaoshu (2010) Survival, growth, sexual maturity and tissue histamine accumulation of the mysis, Neomysis awatschensis and N. japonica Nakazawa, fed histamine supplemented diets. Aquaculture, 302 (3-4). pp. 256-260.

McGinty, Erin L., Evans, Brad S., Taylor, Joseph U.U., and Jerry, Dean R. (2010) Xenografts and pearl production in two pearl oyster species, P. maxima and P. margaritifera: effect on pearl quality and a key to understanding genetic contribution. Aquaculture, 302 (3-4). pp. 175-181.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) A factorial approach to deriving dietary specifications and daily feed intake for mulloway, Argyrosomus japonicus, based on the requirements for digestible protein and energy. Aquaculture, 302 (3-4). pp. 235-242.

Brown, I., Sumpton, W., McLennan, M., Mayer, D., Campbell, M., Kirkwood, J., Butcher, A., Halliday, I., Mapleston, A., Welch, D., Begg, G.A., and Sawynok, B. (2010) An improved technique for estimating short-term survival of released line-caught fish, and an application comparing barotrauma-relief methods in red emperor (Lutjanus sebae Cuvier 1816). Journal of Experimental Marine Biology and Ecology, 385 (1-2). pp. 1-7.

Aldred, Nick, Scardino, Andrew, Cavaco, Andreia, de Nys, Rocky, and Clare, Anthony S. (2010) Attachment strength is a key factor in the selection of surfaces by barnacle cyprids (Balanus amphitrite) during settlement. Biofouling, 26 (3). pp. 287-299.

Weeks, Rebecca, Russ, Garry R., Alcala, Angel C., and White, Alan T. (2010) Effectiveness of marine protected areas in the Philippines for biodiversity conservation. Conservation Biology, 24 (2). pp. 531-540.

Salomon, Yacov, Connolly, Sean R., and Bode, Lance (2010) Effects of asymmetric dispersal on the coexistence of competing species. Ecology Letters, 13 (4). pp. 432-441.

Aswani, Shankar, and Sabetian, Armagan (2010) Implications of urbanization for artisanal parrotfish fisheries in the Western Solomon Islands. Conservation Biology, 24 (2). pp. 520-530.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Yang, Xiaozhen (2010) Reproductive performance and offspring quality of wild-caught and pond-reared swimming crab Portunus trituberculatus broodstock. Aquaculture, 301 (1-4). pp. 78-84.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2010) Sharks in nearshore environments: models, importance, and consequences. Marine Ecology Progress Series, 402. pp. 1-11.

Romano, Nicholas, and Zeng, Chaoshu (2010) Changes to the histological gill structure and haemolymph composition of early blue swimmer crab Portunus pelagicus juveniles during elevated ammonia-N exposure and the post-exposure recovery. Aquaculture Research, 41 (4). pp. 468-480.

Wu, Xuang, Zhou, Bo, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Feng, Lang (2010) Comparison of gender differences in biochemical composition and nutritional value of various edible parts of the blue swimmer crab. Journal of Food Composition and Analysis, 23 (2). pp. 154-159.

Cole, A.J, Pratchett, M.S., and Jones, G.P. (2010) Corallivory in tubelip wrasses: diet, feeding and trophic importance. Journal of Fish Biology, 76 (4). pp. 818-835.

Hoey, A.S., and Bellwood, D.R. (2010) Damselfish territories as a refuge for macroalgae on coral reefs. Coral Reefs, 29 (1). pp. 107-118.

Raina, Jean-Baptiste, Dinsdale, Elizabeth A., Willis, Bette L., and Bourne, David G. (2010) Do the organic sulfur compounds DMSP and DMS drive coral microbial associations? Trends in Microbiology, 18 (3). pp. 101-108.

Romano, Nicholas, and Zeng, Chaoshu (2010) Survival, osmoregulation and ammonia-N excretion of blue swimmer crab, Portunus pelagicus, juveniles exposed to different ammonia-N and salinity combinations. Comparative Biochemistry and Physiology - Part C, 151 (2). pp. 222-228.

Andrés, Mireia, Rotllant, Guiomar, and Zeng, Chaoshu (2010) Survival, development and growth of larvae of the blue swimmer crab, Portunus pelagicus, cultured under different photoperiod conditions. Aquaculture, 300 (1-4). pp. 218-222.

Hobbs, Jean-Paul, and Frisch, Ashley J. (2010) Coral disease in the Indian Ocean: taxonomic susceptibility, spatial distribution and the role of host density on the prevalence of white syndrome. Diseases of Aquatic Organisms, 89 (1). pp. 1-8.

Sumpton, W.D., Brown, I.W., Mayer, D.G., McLennan, M.F., Mapleston, A., Butcher, A.R., Welch, D.J., Kirkwood, J.M., Sawynok, B., and Begg, G.A. (2010) Assessing the effects of line capture and barotrauma relief procedures on post-release survival of key tropical reef fish species in Australia using recreational tagging clubs. Fisheries Management and Ecology, 17 (1). pp. 77-88.

Wong, Marian (2010) Ecological constraints and benefits of philopatry promote group-living in a social but non-cooperatively breeding fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 277 (1680). pp. 353-358.

Wu, X., Chang, G., Cheng, Y., Zeng, C., Southgate, P.C., and Lu, J. (2010) Effects of dietary phospholipid and highly unsaturated fatty acid on the gonadal development, tissue proximate composition, lipid class and fatty acid composition of precocious Chinese mitten crab, Eriocheir sinensis. Aquaculture Nutrition, 16 (1). pp. 25-36.

Bellwood, D.R., Klanten, S., Cowman, P.F., Pratchett, M.S., Konow, N., and Van Herwerden, L. (2010) Evolutionary history of the butterflyfishes (f: Chaetodontidae) and the rise of coral feeding fishes. Journal of Evolutionary Biology, 23 (2). pp. 335-349.

Pollock, F. Joseph, Wilson, Bryan, Johnson, Wesley R., Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Phylogeny of the coral pathogen Vibrio coralliilyticus. Environmental Microbiology Reports, 2 (1). pp. 172-178.

Evans, R.D., Van Herwerden, L., Russ, G.R., and Frisch, A.J. (2010) Strong genetic but not spatial subdivision of two reef fish species targeted by fishers on the Great Barrier Reef. Fisheries Research, 102 (1-2). pp. 16-25.

Sato, Yui, Willis, Bette L., and Bourne, David G. (2010) Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida. ISME Journal, 4 (2). pp. 203-214.

Masonjones, Heather D., Rose, Emily, McRae, Lori Benson, and Dixson, Danielle (2010) An examination of the population dynamics of syngnathid fishes within Tampa Bay, Florida, USA. Current Zoology, 56 (1). pp. 118-133.

Holmes, Thomas H., and McCormick, Mark I. (2010) Size-selectivity of predatory reef fish on juvenile prey. Marine Ecology Progress Series, 399. pp. 273-283.

Hoey, Andrew, and Bellwood, David (2010) Among-habitat variation in herbivory on Sargassum spp. on a mid-shelf reef in the northern Great Barrier Reef. Marine Biology, 157 (1). pp. 189-200.

Dixson, Danielle L., Munday, Philip L., and Jones, Geoffrey P. (2010) Ocean acidification disrupts the innate ability of fish to detect predator olfactory cues. Ecology Letters, 13 (1). pp. 68-75.

Meekan, Mark G., von Kuerthy, Corinna, Mccormick, Mark I., and Radford, Ben (2010) Behavioural mediation of the costs and benefits of fast growth in a marine fish. Animal Behaviour, 79 (4). pp. 803-809.

Cvitanovic, C., and Hoey, A.S. (2010) Benthic community composition influences within-habitat variation in macroalgal browsing on the Great Barrier Reef. Marine and Freshwater Research, 61 (9). pp. 999-1005.

Wilson, S.K., Adjeroud, M., Bellwood, D.R., Berumen, M.L., Booth, D., Bozec, Y.-Marie, Chabanet, P., Cheal, A., Cinner, J., Depczynski, M., Feary, D.A., Gagliano, M., Graham, Nicholas, Halford, A.H., Halpern, B.S., Harborne, A.R., Hoey, A.S., Holbrook, S.J., Jones, G.P., Kulbiki, M., Letourneur, Y., De Loma, T.L., McClanahan, T, McCormick, M.I., Meekan, M.G., Mumby, P. J., Munday, P.L., Öhman, M.C., Pratchett, M.S., Riegl, B., Sano, M., Schmitt, R.J., and Syms, C. (2010) Crucial knowledge gaps in current understanding of climate change impacts on coral reef fishes. Journal of Experimental Biology, 213. pp. 894-900.

Lee, Tristan, Zenger, Kyall R., Close, Robert L., Jones, Marilyn, and Phalen, David N. (2010) Defining spatial genetic structure and management units for vulnerable koala (Phascolarctos cinereus) populations in the Sydney region, Australia. Wildlife Research, 37 (2). pp. 156-165.

Heupel, Michelle R., Williams, Ashley J., Welch, David J., Davies, Campbell R., Penny, Ann, Kritzer, Jacob P., Marriott, Ross J., and Mapstone, Bruce D. (2010) Demographic characteristics of exploited tropical lutjanids: a comparative analysis. Fishery Bulletin, 108 (4). pp. 420-432.

Heupel, Michelle R., Williams, Ashley, Welch, David J., Davies, Campbell R., Adams, Samantha, Carlos, Gary, and Mapstone, Bruce D. (2010) Demography of a large exploited grouper, Plectropomus laevis: implications for fisheries management. Marine and Freshwater Research, 61 (2). pp. 184-195.

Bondarenko, Olga, Kininmonth, Stuart, and Kingsford, Michael (2010) Deployment of wireless sensor network to study oceanography of coral reefs. International Journal on Advances in Networks and Services, 3 (1 and 2). pp. 92-102.

Moorhead, Jonathan A., and Zeng, Chaoshu (2010) Development of captive breeding techniques for marine ornamental fish: a review. Reviews in Fisheries Science, 18 (4). pp. 315-343.

Donelson, J.M., Munday, P.L., McCormick, M.I., Pankhurst, N.W., and Pankhurst, P.M. (2010) Effects of elevated water temperature and food availability on the reproductive performance of a coral reef fish. Marine Ecology Progress Series, 401. pp. 233-243.

Grutter, A.S., Cribb, T.H., McCallum, H., Pickering, J.L., and Mccormick, M.I. (2010) Effects of parasites on larval and juvenile stages of the coral reef fish Pomacentrus moluccensis. Coral Reefs, 29 (1). pp. 31-40.

Connolly, Sean R., and Baird, Andrew H. (2010) Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals. Ecology, 91 (12). pp. 3572-3583.

Goatley, Christopher H.R., Bellwood, David R., and Bellwood, Orpha (2010) Fishes on coral reefs: changing roles over the past 240 million years. Paleobiology, 36 (3). pp. 415-427.

Farnsworth, Claire A, Bellwood, David, and Van Herwerden, Lynne (2010) Genetic structure across the GBR: evidence from short-lived gobies. Marine Biology, 157 (5). pp. 945-953.

Catalano, Sarah R., and Hutson, Kate S. (2010) Harmful parasitic crustaceans infecting wild arripids: A potential threat to southern Australian finfish aquaculture. Aquaculture, 303 (1-4). pp. 101-104.

West, Roianne, Usher, Kim, and Foster, Kim (2010) Increased numbers of Australian Indigenous nurses would make a significant contribution to 'closing the gap' in Indigenous health: what is getting in the way? Contemporary Nurse, 36 (1-2). pp. 121-130.

McCormick, M.I., Moore, J.A.Y., and Munday, P.L. (2010) Influence of habitat degradation on fish replenishment. Coral Reefs, 29 (3). pp. 537-546.

Walther, Benjamin D., Kingsford, Michael J., O'Callaghan, Mark D., and McCulloch, Malcolm T. (2010) Interactive effects of ontogeny, food ration and temperature on elemental incorporation in otoliths of a coral reef fish. Environmental Biology of Fishes, 89 (3-4). pp. 441-451.

Owens, L., Liessmann, L., La Fauce, K., Nyguyen, T., and Zeng, C. (2010) Intranuclear bacilliform virus and hepatopancreatic parvovirus (PmergDNV) in the mud crab Scylla serrata (Forskal) of Australia. Aquaculture, 310 (1-2). pp. 47-51.

Souter, P., Willis, B.L., Bay, L.K., Caley, M.J., Muirhead, A., and van Oppen, M.J.H. (2010) Location and disturbance affect population genetic structure in four coral species of the genus Acropora on the Great Barrier Reef. Marine Ecology Progress Series, 416. pp. 35-45.

Fuiman, Lee A., Meekan, Mark G., and McCormick, Mark I. (2010) Maladaptive behavior reinforces a recruitment bottleneck in newly settled fishes. Oecologia, 164 (1). pp. 99-108.

Johnson, Johanna E., and Welch, David J. (2010) Marine fisheries management in a changing climate: a review of vulnerability and future options. Reviews in Fisheries Science, 18 (1). pp. 106-124.

Neaves, L.E., Zenger, K.R., Cooper, D.W., and Eldridge, M.D.B. (2010) Molecular detection of hybridization between sympatric kangaroo species in south-eastern Australia. Heredity, 104. pp. 502-512.

Kingsford, Michael J., and Carlson, Ian J. (2010) Patterns of distribution and movement of fishes, Ophthalmolepis lineolatus and Hypoplectrodes maccullochi, on temperate rocky reefs of south eastern Australia. Environmental Biology of Fishes, 88 (2). pp. 105-118.

Seneca, Francois O., Forêt , Sylvain, Ball, Eldon E., Smith-Keune, Carolyn, Miller, David J., and van Oppen, Madeleine J.H. (2010) Patterns of gene expression in a scleractinian coral undergoing natural bleaching. Marine Biotechnology, 12 (5). pp. 594-604.

Edmunds, Richard C., Van Herwerden, Lynne, and Fulton, Christopher J. (2010) Population-specific locomotor phenotypes are displayed by barramundi, Lates calcarifer, in response to thermal stress. Canadian Journal of Fisheries and Aquatic Sciences, 67 (7). pp. 1068-1074.

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2010) Prevalence of tissue necrosis and brown spot lesions in a common marine sponge. Marine and Freshwater Research, 61 (4). pp. 484-489.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) Protein and energy utilization and the requirements for maintenance in juvenile mulloway (Argyrosomus japonicus). Fish Physiology and Biochemistry, 36 (1). pp. 109-121.

Catalano, Sarah R., Hutson, Kate S., Ratcliff, Rodney M., and Whittington, Ian D. (2010) Redescriptions of two species of microcotylid monogeneans from three arripid hosts in southern Australian waters. Systematic Parasitology, 76 (3). pp. 211-222.

Munday, Philip L., Dixson, Danielle L., McCormick, Mark I., Meekan, Mark, Ferrari, Maud C.O., and Chivers, Douglas P. (2010) Replenishment of fish populations is threatened by ocean acidification. Proceedings of the National Academy of Sciences of the United States of America, 107 (29). pp. 12930-12934.

Hoey, A.S. (2010) Size matters: macroalgal height influences the feeding response of coral reef herbivores. Marine Ecology Progress Series, 411. pp. 299-302.

Holmes, Thomas H., and McCormick, Mark I. (2010) Smell, learn and live: the role of chemical alarm cues in predator learning during early life history in a marine fish. Behavioural Processes, 83 (3). pp. 299-305.

Welch, David J., Mapstone, Bruce D., Davies, Campbell C., and Russ, Garry R. (2010) Spatial and fishing effects on sampling gear biases in a tropical reef line fishery. Marine and Freshwater Research, 61 (10). pp. 1134-1146.

Haapkylä, J., Melbourne-Thomas, J., Flavell, M., and Willis, B.L. (2010) Spatiotemporal patterns of coral disease prevalence on Heron Island, Great Barrier Reef, Australia. Coral Reefs, 29 (4). pp. 1035-1045.

Newman, Stephen J., Wright, Ian W., Rome, Ben M., Mackie, Michael C., Lewis, Paul D., Buckworth, Rik C., Ballagh, Aaron C., Garrett, Rod N., Stapley, Jason, Broderick, Damien, Ovenden, Jennifer R., and Welch, David J. (2010) Stock structure of Grey Mackerel, Scomberomorus semifasciatus (Pisces: Scombridae) across northern Australia, based on otolith stable isotope chemistry. Environmental Biology of Fishes, 89 (3-4). pp. 357-367.

Newton, James R., Smith-Keune, Carolyn, and Jerry, Dean R. (2010) Thermal tolerance varies in tropical and sub-tropical populations of barramundi (Lates calcarifer) consistent with local adaptation. Aquaculture, 308 (Supplement 1). S128-S132.

O'Shea, Owen R,, Kingsford, Michael J., and Seymour, Jamie (2010) Tide-related periodicity of manta rays and sharks to cleaning stations on a coral reef. Marine and Freshwater Research, 61 (1). pp. 65-73.

Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.

Stella, J.S., Jones, G.P., and Pratchett, M.S. (2010) Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, 29 (4). pp. 957-973.

Pirozzi, I., Booth, M.A., and Allan, G.L. (2010) The interactive effects of dietary protein and energy on feed intake, growth and protein utilization of juvenile mulloway (Argyrosomus japonicus). Aquaculture Nutrition, 16 (1). pp. 61-71.

Charters, Robbie A., Lester, Robert J.G., Buckworth, Rik C., Newman, Stephen J., Ovenden, Jennifer R., Broderick, Damien, Kravchuck, Olena, Ballagh, Aaron, and Welch, David J. (2010) The stock structure of grey mackerel Scomberomorus semifasciatus in Australia as inferred from its parasite fauna. Fisheries Research, 101 (1-2). pp. 94-99.

Baker, Ron, and Sheaves, Marcus (2009) Overlooked small and juvenile piscivores dominate shallow-water estuarine "refuges" in tropical Australia. Estuarine, Coastal and Shelf Science , 85 (4). pp. 618-626.

Duckworth, Alan R., Wolff, Carsten W., and Luter, Heidi (2009) Patterns of abundance and size across varying spatial scales for the coral reef sponge Coscinoderma matthewsi. Marine Ecology Progress Series, 396. pp. 27-33.

Camus, Thomas, Zeng, Chaoshu, and McKinnon, A. David (2009) Egg production, egg hatching success and population increase of the tropical paracalanid copepod, Bestiolina similis (Calanoida: Paracalanidae) fed different microalgal diets. Aquaculture, 297 (1). pp. 169-175.

Elmhirst, Toby, Connolly, Sean R., and Hughes, Terry P. (2009) Connectivity, regime shifts and the resilience of coral reefs. Coral Reefs, 28 (4). pp. 949-957.

Cole, Andrew J, Chong-Seng, Karen, Pratchett, Morgan S., and Jones, Geoffrey P. (2009) Coral-feeding fishes slow progression of black-band disease. Coral Reefs, 28 (4). p. 965.

Hoey, Andrew S., and Bellwood, David R. (2009) Limited functional redundancy in a high diversity system: single species dominates key ecological process on coral reefs. Ecosystems, 12 (8). pp. 1316-1328.

Baird, Andrew H., Guest, James R., and Willis, Bette L. (2009) Systematic and biogeographical patterns in the reproductive biology of scleractinian corals. Annual Review of Ecology, Evolution, and Systematics, 40. pp. 551-571.

Ritchie, S.A., Rapley, L.P. , Williams, C., Johnson, P.H., Larkman, M., Silcock, R.M., Long, S.A., and Russell, R.C. (2009) A lethal ovitrap-based mass trapping scheme for dengue control in Australia: I. Public acceptability and performance of lethal ovitraps. Medical and Veterinary Entomology, 23 (4). pp. 295-302.

Bonin, Mary C., Munday, Philip L., McCormick, Mark I., Srinivasan, Maya, and Jones, Geoffrey P. (2009) Coral-dwelling fishes resistant to bleaching but not to mortality of host corals. Marine Ecology Progress Series, 394. pp. 215-222.

Hoogenboom, Mia O., Connolly, Sean R., and Anthony, Kenneth R.N. (2009) Effects of photoacclimation on the light niche of corals: a process-based approach. Marine Biology, 156 (12). pp. 2493-2503.

Molecular Ecology Resources Primer Development Consortium, Almany, Glenn R., De Arruda, Maurício P., Arthofer, Wolfgang, Atallah, Z.K., Beissinger, Steven R., Berumen, Michael L., Bogdanowicz, S.M., Brown, S.D., Bruford, Michael W., Burdine, C., Busch, Jeremiah W., Campbell, Nathan R., Carey, D., Carstens, Bryan C., Chu, K.H., Cubeta, Marc A., Cuda, J.P., Cui, Zhaoxia, Datnoff, L.E., Dávila, J.A., Davis, Emily S., Davis, R.M., Diekmann, Onno E., Eizirik, Eduardo, Fargallo, J.A., Fernandes, Fabiano, Fukuda, Hideo, Gale, L.R., Gallagher, Elizabeth, Gao, Yongqiang, Girard, Philippe, Godhe, Anna, Gonçalves, Evonnildo C., Gouveia, Licinia, Grajczyk, Amber M., Grose, M.J., Gu, Zhifeng, Halldén, Christer, Härnström, Karolina, Hemmingsen, Amanda H., Holmes, Gerald, Huang, C.H., Huang, Chuan-chin, Hudman, S.P., Jones, Geoffrey P., Kanetis, Loukas, Karunasagar, Iddya, Karunasagar, Indrani, Keyghobadi, Nusha, Klosterman, S.J., Klug, Page E., Koch, J., Koopman, Margaret M., Köppler, Kirsten, Koshimizu, Eriko, Krumböck, Susanne, Kubisiak, T., Landis, J.B., Lasta, Mario L., Lee, Chow-Yang, Li, Qianqian, Li, Shou-Hsien, Lin, Rong-Chien, Liu, M., Liu, Na, Liu, W.C., Liu, Yuan, Loiseau, A., Luan, Weisha, Maruthachalam, K.K., McCormick, Helen M., Mellick, Rohan, Monnahan, P.J., Morielle-Versute, Eliana, Murray, Tomás E., Narum, Shawn R., Neufeld, Katie, De Nova, P.J.G., Ojiambo, Peter S., Okamoto, Nobuaki, Othman, Ahmad Sofiman, Overholt, W.A., Pardini, Renata, Paterson, Ian G., Patty, Olivia A., Paxton, Robert J., Planes, Serge, Porter, Carolyn, Pratchett, Morgan S., Püttker, Thomas, Rasic, Gordana, Rasool, Bilal, Rey, O., Riegler, Markus, Riehl, C., Roberts, John M.K., Roberts, P.D., Rochel, Elisabeth, Roe, Kevin J., Rossetto, Maurizio, Ruzzante, Daniel E., Sakamoto, Takashi, Saravanan, V., Sarturi, Cladinara Roberts, Schmidt, Anke, Schneider, Maria Paula Cruz, Schuler, Hannes, Serb, Jeanne M., Serrão, Ester T.A., Shi, Yaohua, Silva, Artur, Sin, Y.W., Sommer, Simone, Stauffer, Christian, Strüssmann, Carlos Augusto, Subbarao, K.V., Syms, Craig, Tan, Feng, Tejedor, Eugenio Daniel, Thorrold, Simon R., Trigiano, Robert N., Trucco, María I., Tsuchiya-Jerep, Mirian Tienko Nunes, Vergara, P., van de Vliet, Mirjam S., Wadl, Phillip A., Wang, Aimin, Wang, Hongxia, Wang, R.X., Wang, Xinwang, Wang, Yan, Weeks, Andrew R., Wei, Fuwen, Werner, William J., Wiley, E.O., Williams, D.A., Wilkins, Richard J., Wisely, Samantha M., With, Kimberly A., Wu, Danhua, Yao, Cheng-Te, Yau, Cynthia, Yeap, Beng-Keok, Zhai, Bao-Ping, Zhan, Xiangjiang, Zhang, Guo-Yan, Zhang, S.Y., Zhao, Ru, and Zhu, Lifeng (2009) Permanent genetic resources added to Molecular Ecology Resources Database 1 May 2009–31 July 2009. Molecular Ecology Resources, 9 (6). pp. 1460-1466.

Kosnik, Mathew, Hua, Quan, Kaufman, Darrell S., and Wust, Raphael A. (2009) Taphonomic bias and time-averaging in tropical molluscan death assemblages: differential shell half-lives in Great Barrier Reef sediment. Paleobiology, 35 (4). pp. 565-586.

Scardino, A.J., Zhang, H., Cookson, D.J, Lamb, R.N, and de Nys, R. (2009) The role of nano-roughness in antifouling. Biofouling, 25 (8). pp. 757-767.

Bellwood, David R., and Meyer, Christopher P. (2009) Endemism and evolution in the Coral Triangle: a call for clarity. Journal of Biogeography, 36 (10). pp. 2010-2012.

van Herwerden, Lynne, Aspden, William J., Newman, Stephen J., Pegg, Graham G., Briskey, Leica, and Sinclair, William (2009) A comparison of the population genetics of Lethrinus miniatus and Lutjanus sebae from the east and west coasts of Australia: evidence for panmixia and isolation. Fisheries Research, 100 (2). pp. 148-155.

Walker, Stefan P.W., and McCormick, Mark I. (2009) Sexual selection explains sex-specific growth plasticity and positive allometry for sexual size dimorphism in a reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3335-3343.

McCormick, Mark I. (2009) Behaviourally Mediated Phenotypic Selection in a Disturbed Coral Reef Environment. PLoS ONE, 4 (9). p. 7096.

Stockwell, Brian, Jadloc, Claro Renato L., Abesamis, Rene A., Alcala, Angel C., and Russ, Garry R. (2009) Trophic and benthic responses to no-take marine reserve protection in the Philippines. Marine Ecology Progress Series, 389. pp. 1-15.

Cooper, T.F., Gilmour, J.P., and Fabricius, K.E. (2009) Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes. Coral Reefs, 28 (3). pp. 589-606.

Edmunds, Richard C., Hillersøy, Grethe, Momigliano, Paolo, and Van Herwerden, Lynne (2009) Classic approach revitalizes genomics: complete characterization of a candidate gene for thermal adaptation in two coral reef fishes. Marine Genomics, 2 (3-4). pp. 215-222.

Cowman, Peter F., Bellwood, David R., and van Herwerden, Lynne (2009) Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Molecular Phylogenetics and Evolution, 52 (3). pp. 621-631.

Munday, Philip L., Donelson, Jennifer M., Dixson, Danielle L. , and Endo, Geoff G.K. (2009) Effects of ocean acidification on the early life history of a tropical marine fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3275-3283.

Lemberget, T., McCormick, M.I., and Wilson, D.T. (2009) Environmental influences on the replenishment of lizardfish (family Synodontidae) in Caribbean Panama. Coral Reefs, 28 (3). pp. 737-750.

Gotelli, Nicholas J., Anderson, Marti J., Hector, T. Arita, Chao, Anne, Colwell, Robert K., Connolly, Sean R., Currie, David J., Dunn, Robert R., Graves, Gary R., Green, Jessica L., Grytnes, John-Arvid, Jiang, Yi-Huei, Jetz, Walter, Lyons, S. Kathleen, McCain, Christy M., Magurran, Anne E., Rahbek, Carsten, Rangel, Thiago F.L.V.B., Soberón, Jorge, Webb, Campbell O., and Willig, Michael R. (2009) Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters, 12 (9). pp. 873-886.

Hobbs, J-P.A., Frisch, A.J., Hamanaka, T., McDonald, C.A., Gilligan, J.J., and Neilson, J. (2009) Seasonal aggregation of juvenile whale sharks (Rhincodon typus) at Christmas Island, Indian Ocean. Coral Reefs, 28 (3). p. 577.

Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.

Nguyen, Thuy T.T., Davy, F. Brian, Rimmer, Michael A., and De Silva, Sena S. (2009) Use and exchange of genetic resources of emerging species for aquaculture and other purposes. Reviews in Aquaculture, 1 (3-4). pp. 260-274.

Pirozzi, Igor, and Booth, Mark A. (2009) The effect of temperature and body weight on the routine metabolic rate and postprandial metabolic response in mulloway, Argyrosomus japonicus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 154 (1). pp. 110-118.

Sato, Yui, Bourne, David G., and Willis, Bette L. (2009) Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia). Proceedings of the Royal Society of London Series B, 276. pp. 2795-2803.

Watson, Sue-Ann, Southgate, Paul C., Tyler, Paul A., and Peck, Lloyd (2009) Early larval development of the Sydney rock oyster Saccostrea glomerata under near-future predictions of CO2 driven ocean acidification. Journal of Shellfish Research, 28 (3). pp. 431-437.

Slater, Matthew J., and Carton, Alexander G. (2009) Effect of sea cucumber (Australostichopus mollis) grazing on coastal sediments impacted by mussel farm deposition. Marine Pollution Bulletin, 58 (8). pp. 1123-1129.

Kroon, F.J., Munday, P.L., and Westcott, D.A. (2009) Equivalent whole-body concentrations of 11-ketotestosterone in female and male coral goby (Gobiodon erythrospilus), a bi-directional sex-changing fish. Journal of Fish Biology, 75 (3). pp. 685-692.

Carter, A.B., Williams, A.J., and Russ, G.R. (2009) Increased accuracy of batch fecundity estimates using oocyte stage ratios in Plectropomus leopardus. Journal of Fish Biology, 75 (3). pp. 716-722.

Munday, Philip L., Crawley, Natalie, and Nilsson, Göran E. (2009) Interacting effects of elevated temperature and ocean acidification on the aerobic performance of coral reef fishes. Marine Ecology Progress Series, 388. pp. 235-242.

Neaves, Linda E., Zenger, Kyall R., Prince, Robert I.T., Eldridge, Mark D.B., and Cooper, Desmond W. (2009) Landscape discontinuities influence gene flow and genetic structure in a large, vagile Australian mammal, Macropus fuliginosus. Molecular Ecology, 18 (16). pp. 3363-3378.

Abrego, David A., van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Onset of algal endosymbiont specificity varies among closely related species of Acropora corals during early ontogeny. Molecular Ecology, 18 (16). pp. 3532-3543.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Mamangkey, N. Gustaf F., and Southgate, Paul C. (2009) Regeneration of excised mantle tissue by the silver-lip pearl oyster, Pinctada maxima (Jameson). Fish and Shellfish Immunology, 27 (2). pp. 164-174.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Liying, Sui, Southgate, Paul, Zhou, Gang, and Bian, Wenji (2009) Reproductive performance and offspring quality of Chinese mitten crab Eriocheir sinensis (H. Milne-Edwards) females fed an optimized formulated diet and the razor clam Sinonovacula constricta. Aquaculture Research, 40 (12). pp. 1335-1349.

Slater, Matthew J., Jeffs, Andrew G., and Carton, Alexander G. (2009) The use of the waste from green-lipped mussels as a food source for juvenile sea cucumber, Australostichopus mollis. Aquaculture, 292 (3-4). pp. 219-224.

van Herwerden, Lynne, Choat, J. Howard, Newman, Stephen J., Leray, Mattieu, and Hillersoy, Grethe (2009) Complex patterns of population structure and recruitment of Plectropomus leopardus (Pisces: Epinephelidae) in the Indo-West Pacific: implications for fisheries management. Marine Biology, 156 (8). pp. 1595-1607.

Guy, Jeffrey A., Jerry, Dean R., and Rowland, Stuart J. (2009) Heterosis in fingerlings from a diallel cross between two wild strains of silver perch (Bidyanus bidyanus). Aquaculture Research, 40 (11). pp. 1291-1300.

Gagliano, Monica, and McCormick, Mark I. (2009) Hormonally mediated maternal effects shape offspring survival potential in stressful environments. Oecologia, 160 (4). pp. 657-665.

Brierley, Andrew S., and Kingsford, Michael J. (2009) Impacts of climate change on marine organisms and ecosystems. Current Biology, 19 (14). R602-R614.

Zischke, M.T., Cribb, T.H., Welch, D.J., Sawynok, W., and Lester, R.J.G. (2009) Stock structure of blue threadfin Eleutheronema tetradactylum on the Queensland east coast, as determined by parasites and conventional tagging. Journal of Fish Biology, 75 (1). pp. 156-171.

Cooper, Timothy F., and Ulstrup, Karin E. (2009) Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient. Estuarine, Coastal and Shelf Science , 83 (2). pp. 186-196.

Munday, P.L., Leis, J.M., Lough, J.M., Paris, C.B., Kingsford, M.J., Berumen, M.L., and Lambrechts, J. (2009) Climate change and coral reef connectivity. Coral Reefs, 28 (2). pp. 379-395.

Botsford, L.W., White, J.W., Coffroth, M-A., Paris, C.B., Planes, S., Shearer, T.L., Thorrold, S.R., and Jones, G.P. (2009) Connectivity and resilience of coral reef metapopulations in marine protected areas: matching empirical efforts to predictive needs. Coral Reefs, 28 (2). pp. 327-337.

Almany, G.R., Connolly, S.R., Heath, D.D., Hogan, J.D., Jones, G.P., McCook, L.J., Mills, M., Pressey, R.L., and Williamson, D.H. (2009) Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs. Coral Reefs, 28 (2). pp. 339-351.

Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.

Smith-Keune, Carolyn, and Jerry, Dean R. (2009) High levels of intra-specific variation in the NG repeat region of the Pinctada maxima N66 organic matrix protein. Aquaculture Research, 40 (9). pp. 1054-1063.

Cantin, N.E., van Oppen, M.J.H., Willis, B.L., Mieog, J.C., and Negri, A.P. (2009) Juvenile corals can acquire more carbon from high-performance algal symbionts. Coral Reefs, 28 (2). pp. 405-414.

Jones, G.P., Almany, G.R., Russ, G.R., Sale, P.F., Steneck, R.S., Van Oppen, M.J.H., and Willis, B.L. (2009) Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28 (2). pp. 307-325.

Gonzalez Cabello, Alonso, and Bellwood, David R. (2009) Local ecological impacts of regional biodiversity on reef fish assemblages. Journal of Biogeography, 36 (6). pp. 1129-1137.

McCook, L.J., Almany, G.R., Berumen, M.L., Day, J.C., Green, A.L., Jones, G.P., Leis, J.M., Planes, S., Russ, G.R., Sale, P.F., and Thorrold, S.R. (2009) Management under uncertainty: guide-lines for incorporating connectivity into the protection of coral reefs. Coral Reefs, 28 (2). pp. 353-366.

Goatley, Christopher, and Bellwood, David R. (2009) Morphological structure in a reef fish assemblage. Coral Reefs, 28 (2). pp. 1-9.

Jones, G.P., Russ, G.R., Sale, P.F., and Steneck, R.S. (2009) Theme section on “Larval connectivity, resilience and the future of coral reefs”. Coral Reefs, 28 (2). pp. 303-305.

Steneck, R.S., Paris, C.B., Arnold, S.N., Ablan-Lagman, M.C., Alcala, A.C., Butler, M.J., McCook, L.J., Russ, G.R., and Sale, P.F. (2009) Thinking and managing outside the box: coalescing connectivity networks to build region-wide resilience in coral reef ecosystems. Coral Reefs, 28 (2). pp. 367-378.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Effects of coral bleaching on the feeding response of two species of coral-feeding fish. Journal of Experimental Marine Biology and Ecology, 373. pp. 11-15.

Feary, David A., McCormick, Mark I., and Jones, Geoffrey P. (2009) Growth of reef fishes in response to live coral cover. Journal of Experimental Marine Biology and Ecology, 373 (1). pp. 45-49.

Meyer, Eli, Aglyamova, Galina V., Wang, Shi, Buchanan-Carter, Jade, Abrego, David, Colbourne, John K., Willis, Bette L., and Matz, Mikhail V. (2009) Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx. BMC Genomics, 10 (219). pp. 1-18.

Littman, Raechel A., Willis, Bette L., Pfeffer, Christian, and Bourne, David G. (2009) Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiology Ecology, 68 (2). pp. 152-163.

Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.

McCormick, Mark I. (2009) Indirect effects of heterospecific interactions on progeny size through maternal stress. Oikos, 118 (5). pp. 744-752.

Pratchett, M.S., Schenk, T.J., Baine, M., Syms, C., and Baird, A.H. (2009) Selective coral mortality associated with outbreaks of Acanthaster planci L. in Bootless Bay, Papua New Guinea. Marine Environmental Research, 67 (4-5). pp. 230-236.

Romano, Nicholas, and Zeng, Chaoshu (2009) Subchronic exposure to nitrite, potassium and their combination on survival, growth, total haemocyte count and gill structure of juvenile blue swimmer crabs, Portunus pelagicus. Ecotoxicology and Environmental Safety, 72 (4). pp. 1287-1295.

Hobbs, Jean-Paul A., Frisch, Ashley J., Allen, Gerald R., and van Herwerden, Lynne (2009) Marine hybrid hotspot at Indo-Pacific biogeographic border. Biology Letters, 5 (2). pp. 258-261.

Donelson, Jennifer M., Munday, Philip L., and McCormick, Mark I. (2009) Parental effects on offspring life histories: when are they important? Biology Letters, 5 (2). pp. 262-265.

Romano, Nicholas, and Zeng, Chaoshu (2009) Evaluating the newly proposed protocol of incorporated potassium in nitrate toxicity experiments at different salinities: a case study with the tiger prawn, Penaeus monodon, juveniles. Aquaculture, 289 (3). pp. 304-309.

Planes, Serge, Jones, Geoffrey P., and Thorrold, Simon R. (2009) Larval dispersal connects fish populations in a network of marine protected areas. Proceedings of the National Academy of Sciences, 106 (14). pp. 5693-5697.

Lober, Malwine, and Zeng, Chaoshu (2009) Effect of microalgae concentration on larval survival, development and growth of an Australian strain of giant freshwater prawn Macrobrachium rosenbergii. Aquaculture, 289 (1). pp. 95-100.

Nankervis, L., and Southgate, P.C. (2009) Enzyme and acid treatment of fish meal for incorporation into formulated microbound diets for barramundi (Lates calcarifer) larvae. Aquaculture Nutrition, 15 (2). pp. 135-143.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2009) Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios. Molecular Ecology, 18 (8). pp. 1765-1776.

Pirozzi, Igor, Booth, Mark A, and Pankhurst, Patricia M. (2009) The effect of stocking density and repeated handling on the growth of juvenile mulloway, Argyrosomus japonicus (Temminck & Schlegel 1843). Aquaculture International, 17 (2). pp. 199-205.

Pirozzi, Igor, and Booth, Mark A. (2009) The routine metabolic rate of mulloway (Argyrosomus japonicus: Sciaenidae) and yellowtail kingfish (Seriola lalandi: Carangidae) acclimated to six different temperatures. Comparative Biochemistry and Physiology: Part A, 152 (4). pp. 586-592.

Mamangkey, N. Gustav F., Acosta-Salmon, Hector, and Southgate, Paul C. (2009) Use of anaesthetics with the silver-lip pearl oyster, Pinctada maxima (Jameson). Aquaculture, 288 (3-4). pp. 280-284.

Kingsford, M.J. (2009) Contrasting patterns of reef utilization and recruitment of coral trout (Plectropomus leopardus) and snapper (Lutjanus carponotatus) at One Tree Island, southern Great Barrier Reef. Coral Reefs, 28 (1). pp. 251-264.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Coral-feeding wrasse scars massive Porites colonies. Coral Reefs, 28 (1). p. 207.

Hoogenboom, Mia O., and Connolly, Sean R. (2009) Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow. Ecology, 90 (3). pp. 767-780.

Bonaldo, Roberta Martini, and Bellwood, David R. (2009) Dynamics of parrotfish grazing scars. Marine Biology, 156 (4). pp. 771-777.

Howells, E.J., van Oppen, M.J.H., and Willis, B.L. (2009) High genetic differentiation and cross-shelf patterns of genetic diversity among Great Barrier Reef populations of Symbiodinium. Coral Reefs, 28 (1). pp. 215-225.

Holmes, Thomas H., and McCormick, Mark I. (2009) Influence of prey body characteristics and performance on predator selection. Oecologia, 159 (2). pp. 401-413.

Bonin, M.C., Srinivasan, M., Almany, G.R., and Jones, G.P. (2009) Interactive effects of interspecifc competition and microhabitat on early post-settlement survival in a coral reef fish. Coral Reefs, 28 (1). pp. 265-274.

Fauvelot, C., Smith-Keune, C., Jerry, D.R., Buston, P.M., and Planes, S. (2009) Isolation and characterization of 16 microsatellite loci in the humbug damselfish, Dascyllus aruanus (family Pomacentridae). Molecular Ecology Resources, 9 (2). pp. 651-653.

Cvitanovic, C., and Bellwood, D.R. (2009) Local variation in herbivore feeding activity on an inshore reef of the Great Barrier Reef. Coral Reefs, 28 (1). pp. 127-133.

Williamson, David, Jones, Geoffrey, Thorrold, Simon R, and Frisch, Ashley J. (2009) Transgenerational marking of marine fish larvae: stable-isotope retention, physiological effects and health issues. Journal of Fish Biology, 74 (4). pp. 891-905.

Sussman, Meir, Mieog, Jos C., Doyle, Jason R., Victor, Steven, Willis, Bette L., and Bourne, David G. (2009) Vibrio Zinc-Metalloprotease causes photoinactivation of coral endosymbionts and coral tissue lesions. PLoS ONE, 4 (2). p. 4511.

Haapkyla, Jessica, Seymour, Adrian S., Barneah, Orit, Brickner, Itzchak, Hennige, Sebastian, Suggett, David, and Smith, David (2009) Association of Waminoa sp. (Acoela) with corals in the Wakatobi Marine Park, South-East Sulawesi, Indonesia. Marine Biology, 156. pp. 1021-1027.

Wismer, Sharon, Hoey, Andrew, and Bellwood, David R. (2009) Cross-shelf benthic community structure on the Great Barrier Reef: relationships between macroalgal cover and herbivore biomass. Marine Ecology Progress Series, 376. pp. 45-54.

Munday, Philip L., Dixson, Danielle L., Donelson, Jennifer M., Jones, Geoffrey P., Pratchett, Morgan S., Devitsina, Galina V., and Døving, Kjell B. (2009) Ocean acidification impairs olfactory discrimination and homing ability of a marine fish. Proceedings of the National Academy of Sciences of the United States of America, 106 (6). pp. 1848-1852.

Cano-Gómez, Ana, Bourne, David G., Hall, Michael R., Owens, Leigh, and Høj, Lone (2009) Molecular identification, typing and tracking of Vibrio harveyi in aquaculture systems: current methods and future prospects. Aquaculture, 287 (1-2). pp. 1-10.

Haynes, Gwilym D., Gongora, Jaime, Nicholas, Frank W., and Zenger, Kyall R. (2009) Rapid identification of maternal lineages in common carp (Cyprinus carpio L.) using real-time PCR and high resolution melt-curve analysis. Aquaculture, 287 (1-2). pp. 59-66.

Camus, Thomas, and Zeng, Chaoshu (2009) The effects of stocking density on egg production and hatching success, cannibalism rate, sex ratio and population growth of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 287 (1). pp. 145-151.

Kingsford, Michael J., Hughes, Julian M., and Patterson, Heather M. (2009) Otolith chemistry of the non-dispersing reef fish Acanthochromis polyacanthus: cross-shelf patterns from the central Great Barrier Reef. Marine Ecology Progress Series, 377. pp. 279-288.

Palmer, Caroline V., Roth, Melissa S., and Gates, Ruth D. (2009) Red fluorescent protein responsible for pigmentation in Trematode-infected Porites compressa tissues. Biological Bulletin, 216 (1). pp. 68-74.

Lemberget, Tove, and McCormick, Mark I. (2009) Replenishment success linked to fluctuating asymmetry in larval fish. Oecologia, 159 (1). pp. 83-93.

Morita, Masaya, Iguchi, Akira, and Takemura, Akihiro (2009) Roles of calmodulin and calcium/calmodulin-dependent protein kinase in flagellar motility regulation in the coral Acropora digitifera. Marine Biotechnology, 11 (1). pp. 118-123.

Hernaman, V., Probert, P.K., and Robbins, W.D. (2009) Trophic ecology of coral reef gobies: interspecific, ontogenetic, and seasonal comparison of diet and feeding intensity. Marine Biology, 156 (3). pp. 317-330.

Smith, Greg G., Hall, Michael W., and Salmon, Matthew (2009) Use of microspheres, fresh and microbound diets to ascertain dietary path, component size, and digestive gland functioning in phyllosoma of the spiny lobster Panulirus ornatus. New Zealand Journal of Marine and Freshwater Research, 43 (1). pp. 205-215.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul C. (2009) A review of recent progress toward development of a formulated microbound diet for mud crab, Scylla serrata, larvae and their nutritional requirements. Aquaculture, 286 (3). pp. 164-175.

Heupel, M.R., Williams, A.J., Welch, D.J., Ballagh, A., Mapstone, B.D., Carlos, G., Davies, C., and Simpfendorfer, C.A. (2009) Effects of fishing on tropical reef associated shark populations on the Great Barrier Reef. Fisheries Research, 95 (2). pp. 350-361.

Lind, Curtis E., Evans, Brad S., Knauer, Jens, Taylor, Joseph J.U., and Jerry, Dean R. (2009) Decreased genetic diversity and a reduced effective population size in cultured silver-lipped pearl oysters (Pinctada maxima). Aquaculture, 286 (1-2). pp. 12-19.

Scardino, A.J., Hudleston, D., Peng, Z., Paul, N.A., and de Nys, R. (2009) Biomimetic characterisation of key surface parameters for the development of fouling resistant materials. Biofouling, 25 (1). pp. 83-93.

Gershwin, Lisa-ann, and Dabinett, Karen (2009) Comparison of eight types of protective clothing against Irukandji jellyfish stings. Journal of Coastal Research, 25 (1). pp. 117-130.

Williams, Ashley J., Davies, Campbell R., Mapstone, Bruce D., Currey, Leanne M., Welch, David J., Begg, Gavin, A., Ballagh, Aaron C., Choat, J. Howard, Murchie, Cameron D., and Simpfendorfer, Colin A. (2009) Age-based demography of humpback grouper Cromileptes altivelis: implications for fisheries management and conservation. Endangered Species Research, 9 (1). pp. 67-79.

Littman, Raechel A., Willis, Bette L., and Bourne, David G. (2009) Bacterial communities of juvenile corals infected with different Symbiodinium (dinoflagellate) clades. Marine Ecology Progress Series, 389. pp. 45-59.

Guenther, Jana, Wright, Anthony D., Burns, Kathryn, and de Nys, Rocky (2009) Chemical antifouling defences of sea stars: effects of the natural products hexadecanoic acid, cholesterol, lathosterol and sitosterol. Marine Ecology Progress Series, 385. pp. 137-149.

Lloyd, Ray, Alford, Ross A., and Schwarzkopf, Lin (2009) Chemical discrimination among predators by lizards: responses of three skink species to the odours of high and low-threat varanid predators. Austral Ecology, 34. pp. 50-54.

Puill-Stephan, Eneour, Willis, Bette L., van Herwerden, Lynne, and van Oppen, Madeleine JH (2009) Chimerism in wild adult populations of the broadcast spawning coral Acropora millepora on the Great Barrier Reef. PLoS ONE, 4 (1). p. 7751.

Edmunds, Richard C., van Herwerden, Lynne, Smith-Keune, Carolyn, and Jerry, Dean R. (2009) Comparative characterization of a temperature responsive gene (lactate dehydrogenase-B, ldh-b) in two congeneric tropical fish, Lates calcarifer and Lates niloticus. International Journal of Biological Sciences, 5 (6). pp. 558-569.

Edmunds, Richard C., van Herwerden, Lynne, Smith-Keune, Carolyn, and Jerry, Dean R. (2009) Comparative characterization of a temperature responsive gene (lactatedehydrogenase-B, ldh-b) in two congeneric tropical fish, Lates calcarifer and Lates niloticus. International Journal of Biological Sciences, 5 (6). pp. 558-569.

Sheaves, Marcus (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Marine Ecology Progress Series, 391. pp. 107-115.

Diaz-Pulido, Guillermo, McCook, Laurence, Dove, Sophie, Berkelmans, Ray, Roff, George, Kline, David I., Weeks, Scarla, Evans, Richard D., Williamson, David H., and Hoegh-Guldberg, Ove (2009) Doom and boom on a resilient reef: climate change, algal overgrowth and coral recovery. PLoS ONE, 4 (4). - .

Peplow, L.M., Kingsford, M.J., Seymour, J.E., and Van Oppen, M.J.H. (2009) Eight microsatellite loci for the Irukandji syndrome-causing carybdeid jellyfish, Carukia barnesi (Cubozoa, Cnidaria). Molecular Ecology Resources, 9. pp. 670-672.

Nilsson, Göran E., Crawley, Natalie, Lunde, Ida G., and Munday, Philip L. (2009) Elevated temperature reduces the respiratory scope of coral reef fishes. Global Change Biology, 15 (6). pp. 1405-1412.

Fox, Rebecca J., Sunderland, Tony L., Hoey, Andrew, and Bellwood, David R. (2009) Estimating ecosystem function: contrasting roles of closely related herbivorous rabbitfishes (Siganidae) on coral reefs. Marine Ecology Progress Series, 385. pp. 261-269.

Adams, Lisa M., Cumbo, Vivian, and Takabayashi, Misaki (2009) Exposure to sediment enhances primary acquisition of Symbiodinium by asymbiotic coral larvae. Marine Ecology Progress Series, 377. pp. 179-156.

Baumgartner, Finn A., Motti, Cherie, de Nys, Rocky, and Paul, Nicholas A. (2009) Feeding preferences and host associations of specialist marine herbivores align with quantitative variation in seaweed secondary metabolites. Marine Ecology Progress Series, 396. pp. 1-12.

Walker, Stefan P.W., and McCormick, Mark I. (2009) Fish ears are sensitive to sex change. Biology Letters, 5. pp. 73-76.

Murray, Nicholas J., and Shaw, Phillip P. (2009) Foraging behaviour and success of Australian white ibis (Threskiornis molucca) in an urban environment. Notornis, 56. pp. 201-205.

Meyer, Eli, Davies, Sarah, Wang, Shi, Willis, Bette L., Abrego, David, Juenger, Thomas E., and Matz, Mikhail V. (2009) Genetic variation in responses to a settlement cue and elevated temperature in the reef-building coral Acropora millepora. Marine Ecology Progress Series, 392. pp. 81-92.

Munday, P. L., Ryen, C.A., McCormick, M. I., and Walker, S.P.W. (2009) Growth acceleration, behaviour and otolith check marks associated with sex change in the wrasse Halichoeres miniatus. Coral Reefs, 28 (3). pp. 623-634.

Page, Cathie A., Baker, David M., Harvell, C Drew, Golbuu, Yimnang, Raymundo, Laurie, Neale, Stephen J., Rosell, Kathryn B., Rypien, Krystal L., Andras, Jason P., and Willis, Bette L. (2009) Influence of marine reserves on coral disease prevalence. Diseases of Aquatic Organisms, 87 (1-2). pp. 135-150.

Horne, John B., McIlwain, Jennifer L., and Van Herwerden, Lynne (2009) Isolation of 15 new polymorphic microsatellite markers from the blue-spine unicornfish Naso unicornis. Conservation Genetics Resources, 2. pp. 1-4.

Baird, Andrew, Birrell, Chico L., Hughes, Terence, McDonald, Abbi, Nojima, Satoshi, Page, Cathie A., Pratchett, Morgan S., and Yamasaki, Hideo (2009) Latitudinal variation in reproductive synchrony in Acropora assemblages: Japan vs. Australia. Galaxea, Journal of Coral Reef Studies, 11 (2). pp. 101-108.

Owens, Leigh, La Fauce, Kathy , Juntunen, Karen, Hayakijkosol, Orachun, and Zeng, Chaoshu (2009) Macrobrachium rosenbergii nodavirus disease (white tail disease) in Australia. Diseases of Aquatic Organisms, 85 (3). pp. 175-180.

Gagliano, Monica, Dunlap, Walter C., de Nys, Rocky, and Depczynski, Martial (2009) Ockham’s razor gone blunt: coenzyme Q adaptation and redox balance in tropical reef fishes. Biology Letters, 5 (3). pp. 360-363.

Curley, Belinda G., and Gillings, Michael R. (2009) Population connectivity in the temperate damselfish Parma microlepis: analyses of genetic structure across multiple spatial scales. Marine Biology, 156 (3). pp. 381-393.

Bellwood, David R., and Meyer, Christopher P. (2009) Searching for heat in a marine biodiversity hotspot. Journal of Biogeography, 36. pp. 569-576.

Tziouveli, Vasiliki, and Smith, Greg (2009) Sexual maturity and environmental sex determination in the white-striped cleaner shrimp Lysmata amboinensis. Invertebrate Reproduction and Development, 53 (3). pp. 155-163.

Haapkyla, Jessica, Unsworth, Richard K.F., Seymour, Adrian S., Melbourne-Thomas, Jessica, Flavell, Mike, Willis, Bette L., and Smith, David J. (2009) Spatio-temporal coral disease dynamics in the Wakatobi Marine National Park, South-East Sulawesi, Indonesia. Diseases of Aquatic Organisms, 87 (1-2). pp. 105-115.

Connolly, Sean R, Dornelas, Maria, Bellwood, David R., and Hughes, Terence P (2009) Testing species abundance models: a new bootstrap approach applied to Indo-Pacific coral reefs. Ecology, 90 (11). pp. 3138-3149.

Bell, Johann D., Clua, Eric, Hair, Cathy A., Galzin, Rene, and Doherty, Peter J. (2009) The capture and culture of post-larval fish and invertebrates for the marine ornamental trade. Reviews in Fisheries Science, 17 (2). pp. 223-240.

Williamson, David H., Jones, Geoffrey P., and Thorrold, Simon R. (2009) An experimental evaluation of transgenerational isotope labelling in a coral reef grouper. Marine Biology, 156. pp. 2517-2525.

Rapley, Luke, Johnson, P.H., Williams, C. R., Silcock, R. M., Larkman, M., Long, S. A., Russel, R. C., and Ritchie, Scott (2009) A lethal ovitrap-based mass trapping scheme for dengue control in Australia: II. Impact on populations of the mosquito Aedes aegypti. Medical and Veterinary Entomology, 23 (4). pp. 303-316.

Kim, Kiho, Page, Cathie A., and Harvell, C. Drew (2009) The role of environment and microorganisms in diseases of corals: overview of DAO Special 5. Diseases of Aquatic Organisms, 87 (1-2). pp. 1-3.

Trip, Elisabeth L., Choat, J. Howard, Wilson, David T., and Robertson, D. Ross (2008) Inter-oceanic analysis of demographic variation in a widely distributed Indo-Pacific coral reef fish. Marine Ecology Progress Series, 373. pp. 97-109.

Dixson, Danielle L. , Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., Srinivasan, Maya, Syms, Craig, and Thorrold, Simon R. (2008) Coral reef fish smell leaves to find island homes. Proceedings of the Royal Society of London Series B, Biological Sciences, 275. pp. 2831-2839.

Palmer, Caroline V., Mydlarz, Laura D., and Willis, Bette L. (2008) Evidence of an inflammatory-like response in non-normally pigmented tissues of two scleractinian corals. Proceedings of the Royal Society of London Series B, Biological Sciences, 275 (1652). pp. 2687-2693.

de Paula Silva, Pedro H., McBride, S., de Nys, Rocky, and Paul, Nicholas (2008) Integrating filamentous 'green tide' algae into tropical pond-based aquaculture. Aquaculture, 284 (1-4). pp. 74-80.

Collins, Angela B., Heupel, Michelle R., and Simpfendorfer, Colin A. (2008) Spatial distribution and long-term movement patterns of cownose rays Rhinoptera bonasus within an estuarine river. Estuaries and Coasts, 31 (6). pp. 1174-1183.

Whalan, S., Ettinger-Epstein, P., and de Nys, R. (2008) The effect of temperature on larval pre-settlement duration and metamorphosis for the sponge, Rhopaloeides odorabile. Coral Reefs, 27 (4). pp. 783-786.

Sheaves, Marcus, Duc, Nguyen Huu , and Khoa, Nguyen Xuan (2008) Ecological attributes of a tropical river basin vulnerable to the impacts of clustered hydropower developments. Marine and Freshwater Research, 59 (11). pp. 971-986.

Carlson, John K., Heupel, Michelle R., Bethea, Dana M., and Hollensead, Lisa D. (2008) Coastal habitat use and residency of juvenile Atlantic sharpnose sharks (Rhizoprionodon terraenovae). Estuaries and Coasts, 31 (5). pp. 931-940.

Horne, John B., van Herwerden, Lynne, Choat, J. Howard, and Robertson, D.R. (2008) High population connectivity across the Indo-Pacific: congruent lack of phylogeographic structure in three reef fish congeners. Molecular Phylogenetics and Evolution, 49 (2). pp. 629-638.

Kosnik, Matthew A., Kaufman, Darrell S., and Hua, Quan (2008) Identifying outliers and assessing the accuracy of amino acid racemization measurements for geochronology: I. Age calibration curves. Quaternary Geochronology, 3 (4). pp. 308-327.

Kosnik, Matthew A., and Kaufman, Darrell S. (2008) Identifying outliers and assessing the accuracy of amino acid racemization measurements for geochronology: II. Data screening. Quaternary Geochronology, 3 (4). pp. 328-341.

Abrantes, Katya, and Sheaves, Marcus (2008) Incorporation of terrestrial wetland material into aquatic food webs in a tropical estuarine wetland. Estuarine, Coastal and Shelf Science , 80 (3). pp. 401-412.

Madin, Joshua S., O'Donnell, Michael J., and Connolly, Sean R. (2008) Climate-mediated mechanical changes to post-disturbance coral assemblages. Biology Letters, 4 (5). pp. 490-493.

Abrego, David, Ulstrup, Karin E., Willis, Bette L., and van Oppen, Madeleine J.H. (2008) Species-specific interactions between algal endosymbionts and coral hosts define their bleaching response to heat and light stress. Proceedings of the Royal Society of London Series B, Biological Sciences, 275 (1648). pp. 2273-2282.

Dornelas, Maria, and Connolly, Sean (2008) Multiple modes in a coral species abundance distribution. Ecology Letters, 11 (10). pp. 1008-1016.

Belmaker, Jonathan, Ziv, Yaron, Shashar, Nadav, and Connolly, Sean R. (2008) Regional variation in the hierarchical partitioning of diversity in coral-dwelling fishes. Ecology, 89 (10). pp. 2829-2840.

Whalan, S., Ettinger-Epstein, P., Battershill, C., and de Nys, R. (2008) Larval vertical migration and hierarchical selectivity of settlement in a brooding marine sponge. Marine Ecology Progress Series, 368. pp. 145-154.

Littman, Raechel A., van Oppen, Madeleine J.H., and Willis, Bette L. (2008) Methods for sampling free-living Symbiodinium (zooxanthellae) and their distribution and abundance at Lizard Island (Great Barrier Reef). Journal of Experimental Marine Biology and Ecology, 364 (1). pp. 48-53.

Paul, Nicholas, and de Nys, Rocky (2008) Promise and pitfalls of locally abundant seaweeds as biofilters for integrated aquaculture. Aquaculture, 281 (1-4). pp. 49-55.

Cole, Andrew J., Pratchett, Morgan S., and Jones, Geoffrey P. (2008) Diversity and functional importance of coral-feeding fishes on tropical coral reefs. Fish and Fisheries, 9. pp. 286-307.

Phelan, M.J., Gribble, N.A., and Garrett, R.N. (2008) Fishery biology and management of Protonibea diacanthus (Sciaenidae) aggregations in far Northern Cape York Peninsula waters. Continental Shelf Research, 28 (16). pp. 2143-2151.

Grutter, A.S., Pickering, J.L., McCallum, H., and McCormick, M.I. (2008) Impact of micropredatory gnathiid isopods on young coral reef fishes. Coral Reefs, 27 (3). pp. 655-661.

Fox, R.J., and Bellwood, D. R. (2008) Remote video bioassays reveal the potential feeding impact of the rabbitfish Siganus canaliculatus (f: Siganidae) on an inner-shelf reef of the Great Barrier Reef. Coral Reefs, 27 (3). pp. 605-615.

Graham, E.M., Baird, A.H., and Connolly, S.R. (2008) Survival dynamics of scleractinian coral larvae and implications for dispersal. Coral Reefs, 27 (3). pp. 529-539.

Cooper, Timothy F., Ridd, Peter V., Ulstrup, Karin E., Humphrey, Craig, Slivokoff, Matthew, and Fabricius, Katharina E. (2008) Temporal dynamics in coral bioindicators for water quality on coastal coral reefs of the Great Barrier Reef. Marine and Freshwater Research, 59 (8). pp. 703-716.

Work, Thierry M., Richardson, Laurie L., Reynolds, Taylor L., and Willis, Bette L. (2008) Biomedical and veterinary science can increase our understanding of coral disease. Journal of Experimental Marine Biology and Ecology, 362 (2). pp. 63-70.

Camus, Thomas, and Zeng, Chaoshu (2008) Effects of photoperiod on egg production and hatching success, naupliar and copepodite development, adult sex ratio and life expectancy of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 280 (1-4). pp. 220-226.

Kvingedal, Renate, Evans, Bradley S., Taylor, Joseph J.U., Knauer, Jens, and Jerry, Dean R. (2008) Family by environment interactions in shell size of 43-day old silver-lip pearl oyster (Pinctada maxima), five families reared under different nursery conditions. Aquaculture, 279 (1-4). pp. 23-28.

Renema, W., Bellwood, D.R., Braga, J.C., Bromfield, K., Hall, R., Johnson, K.G., Lunt, P., Meyer, C.P., McMonagle, L.B., Morley, R.J., O'Dea, A., Todd, J.A., Wesselingh, F.P., Wilson, M.E.J., and Pandlofi, J.M. (2008) Hopping hotspots: global shifts in marine biodiversity. Science, 321 (5889). pp. 654-657.

Ettinger-Epstein, Piers, and Kingsford, Michael J. (2008) Effects of the El Nino southern oscillation on Turbo torquatus (Gastropoda) and their kelp habitat. Austral Ecology, 33 (5). pp. 594-606.

Gershwin, Lisa-ann, and Dawes, Peter (2008) Preliminary observations on the response of Chironex fleckeri (Cnidaria: Cubozoa: Chirodropida) to different colors of light. Biological Bulletin, 215 (1). pp. 57-62.

Boyle, M.C., and Limpus, C.J. (2008) The stomach contents of post-hatchling green and loggerhead sea turtles in the southwest Pacific: an insight into habitat association. Marine Biology, 155 (2). pp. 233-241.

Sofonia, Jeremy J., and Anthony, Kenneth R.N. (2008) High-sediment tolerance in the reef coral Turbinaria mesenterina from the inner Great Barrier Reef lagoon (Australia). Estuarine, Coastal and Shelf Science , 78 (4). pp. 748-752.

Wellenreuther, Maren, Syms, Craig, and Clements, Kendall D. (2008) Body size and ecological diversification in a sister species pair of triplefin fishes. Evolutionary Ecology, 22 (4). pp. 575-592.

Russ, Garry R., Cheal, Alistair J., Dolman, Andrew M., Emslie, Michael J., Evans, Richard D., Miller, Ian, Sweatman, Hugh, and Williamson, David H. (2008) Rapid increase in fish numbers follows creation of world's largest marine reserve network. Current Biology, 18 (12). pp. 514-515.

Yeiser, B.G., Heupel, M.R., and Simpfendorfer, C.A. (2008) Occurrence, home range and movement patterns of juvenile bull (Carcharhinus leucas) and lemon (Negaprion brevirostris) sharks within a Florida estuary. Marine and Freshwater Research, 59 (6). pp. 489-501.

Frisch, Ashley J. (2008) Social organisation and den utilisation of painted spiny lobster (Panulirus versicolor) on a coral reef at Northwest Island, Australia. Marine and Freshwater Research, 59 (6). pp. 521-528.

Donelson, Jennifer M., McCormick, Mark I., and Munday, Philip (2008) Parental condition affects early life-history of a coral reef fish. Journal of Experimental Marine Biology and Ecology, 360 (2). pp. 109-116.

Fielder, D. Stewart, Allan, Geoff L., and Pankhurst, Patricia M. (2008) Comparison of two environmental regimes for culture of Australian snapper, Pagrus auratus, larvae in commercial-scale tanks. Journal of the World Aquaculture Society, 39 (3). pp. 364-374.

Sussman, Meir, Willis, Bette L., Victor, Steven, and Bourne, David G. (2008) Coral pathogens identified for white syndrome (WS) epizootics in the Indo-Pacific. Public Library of Science ONE , 3 (6). pp. 1-14.

Mapleston, Amos, Welch, David, Begg, Gavin A., McLennan, Mark, Mayer, David, and Brown, Ian (2008) Effect of changes in hook pattern and size on catch rate, hooking location, injury and bleeding for a number of tropical reef fish species. Fisheries Research, 91 (2-3). pp. 203-211.

McCormick, Mark I., and Larson, Johan K. (2008) Effect of hunger on the response to, and the production of, chemical alarm cues in a coral reef fish. Animal Behaviour, 75 (6). pp. 1973-1980.

Page, C.A., and Willis, B.L. (2008) Epidemiology of skeletal eroding band on the Great Barrier Reef and the role of injury in the initiation of this widespread coral disease. Coral Reefs, 27 (2). pp. 257-272.

Johansen, J.L., Bellwood, D.R., and Fulton, C.J. (2008) Do coral reef fishes exploit flow refuges in high-flow habitats. Marine Ecology Progress Series, 360. pp. 219-226.

Bonaldo, Roberta M., and Bellwood, David R. (2008) Size-dependent variation in the functional role of the parrotfish Scarus rivulatus on the Great Barrier Reef, Australia. Marine Ecology Progress Series, 360. pp. 237-244.

Jerry, Dean R. (2008) Phylogeography of the freshwater catfish Tandanus tandanus (Plotosidae): a model species to understand evolution of the eastern Australian freshwater fish fauna. Marine and Freshwater Research, 59 (4). pp. 351-360.

Ballagh, D.A., Pankhurst, P.M., and Fielder, D.S. (2008) Photoperiod and feeding interval requirements of juvenile mulloway, Argyrosomus japonicus. Aquaculture, 277 (1-2). pp. 52-57.

Wolanski, Eric, Fabricius, Katharina E., Cooper, Timothy F., and Humphrey, Craig (2008) Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef. Estuarine, Coastal and Shelf Science , 77 (4). pp. 755-762.

Mendell, Jennifer E., Clements, Kendall D., Choat, J. Howard, and Angert, Esther R. (2008) Extreme polyploidy in a large bacterium. Proceedings of the National Academy of Sciences of the United States of America, 105 (18). pp. 6730-6734.

Wong, Marian Y.L., Munday, Philip L., Buston, Peter, and Jones, Geoffrey P. (2008) Fasting or feasting in a fish social hierarchy. Current Biology, 18 (9). R372-R373.

Verges, Adriana, Paul, Nicholas A., and Steinberg, Peter D. (2008) Sex and life-history stage alter herbivore responses to a chemically defended red alga. Ecology, 89 (5). pp. 1334-1343.

Penfold, Rose, Grutter, Alexandra S., Kuris, Armand M., McCormick, Mark I., and Jones, Cornor M. (2008) Interactions between juvenile marine fish and gnathiid isopods: predation versus micropredation. Marine Ecology Progress Series, 357. pp. 111-119.

Fox, Rebecca J., and Bellwood, David R. (2008) Direct versus indirect methods of quantifying herbivore grazing impact on a coral reef. Marine Biology, 154 (2). pp. 325-334.

Steger, Doris, Ettinger-Epstein, Piers, Whalan, Stephen, Hentschel, Ute, de Nys, Rocky, Wagner, Michael, and Taylor, Michael W. (2008) Diversity and mode of transmission of ammonia-oxidizing archaea in marine sponges. Environmental Microbiology, 10 (4). pp. 1087-1094.

Hoogenboom, Mia O., Connolly, Sean R., and Anthony, Kenneth R.N. (2008) Interactions between morphological and physiological plasticity optimize energy acquisition in corals. Ecology, 89 (4). pp. 1144-1154.

Welch, David J., Mapstone, Bruce D., and Begg, Gavin A. (2008) Spatial and temporal variation and effects of changes in management in discard rates from the commercial reef line fishery of the Great Barrier Reef, Australia. Fisheries Research, 90 (1-3). pp. 247-260.

McGinty, Erin L., Smith-Keune, Carolyn, and Jerry, Dean R. (2008) A high through-put protocol for quantifying nucleic acids in individual microcrustaceans using new generation RNA and DNA specific dyes. Journal of Shellfish Research, 27 (2). pp. 449-455.

Milione, Michael, and Zeng, Chaoshu (2008) The effects of temperature and salinity on population growth and egg hatching success of the tropical calanoid copepod, Acartia sinjiensis. Aquaculture, 275 (1-4). pp. 116-123.

Maynard, Jeff A., Turner, Peter, Anthony, Kenneth R.N., Baird, Andrew H., Berkelmans, Ray, Eakin, C. Mark, Johnson, Johanna, Marshall, Paul A., Packer, Gareck R., Rea, Anthony, and Willis, Bette L. (2008) ReefTemp: an interactive monitoring system for coral bleaching using high-resolution SST and improved stress predictors. Geophysical Research Letters, 35. pp. 1-5.

Simpfendorfer, Colin Ashley, Heupel, Michelle RaNae, and Collins, Angela B. (2008) Variation in the performance of acoustic receivers and its implication for positioning algorithms in a riverine setting. Canadian Journal of Fisheries and Aquatic Sciences, 65 (3). pp. 482-492.

Evans, R.D., Russ, G.R., and Kritzer, J.P. (2008) Batch fecundity of Lutjanus carponotatus (Lutjanidae) and implications of no-take marine reserves on the Great Barrier Reef, Australia. Coral Reefs, 27 (1). pp. 179-189.

Richards, Zoe T., Beger, Maria, Pinca, Silvia, and Wallace, Carden C. (2008) Bikini Atoll coral biodiversity resilience five decades after nuclear testing. Marine Pollution Bulletin, 56 (3). pp. 503-515.

Hoey, A. S., and Bellwood, D. R. (2008) Cross-shelf variation in the role of parrotfishes on the Great Barrier Reef. Coral Reefs, 27 (1). pp. 37-47.

Cooper, Timothy F., De'Ath, Glenn, Fabricius, Katharina E., and Lough, Janice M. (2008) Declining coral calcification in massive Porites in two nearshore regions of the northern Great Barrier Reef. Global Change Biology, 14 (3). pp. 529-538.

Fabricius, Katharina E., De'Ath, Glenn, Puotinen, Marji Lee, Done, Terry, Cooper, Timothy F., and Burgess, Scott C. (2008) Disturbance gradients on inshore and offshore coral reefs caused by a severe tropical cyclone. Limnology and Oceanography, 53 (2). pp. 690-704.

Konow, Nicolai, Bellwood, David R., Wainwright, Peter C., and Kerr, Alexander M. (2008) Evolution of novel jaw joints promote trophic diversity in coral reef fishes. Biological Journal of the Linnean Society, 93 (3). pp. 545-555.

Smith-Keune, C., and Dove, S. (2008) Gene expression of a green fluorescent protein homolog as a host-specific biomarker of heat stress within a reef-building coral. Marine Biotechnology, 10 (2). pp. 166-180.

Wilson, Shaun K., Burgess, Scott C., Cheal, Alistair J., Emslie, Mike, Fisher, Rebecca, Miller, Ian, Polunin, Nicholas V.C., and Sweatman, Hugh P.A. (2008) Habitat utilization by coral reef fish: implications for specialists vs. generalists in a changing environment. Journal of Animal Ecology, 77 (2). pp. 220-228.

Wong, Marian Y.L., Munday, Philip L., Buston, Peter M., and Jones, Geoffrey P. (2008) Monogamy when there is potential for polygyny: tests of multiple hypotheses in a group-living fish. Behavioral Ecology, 19 (2). pp. 353-361.

McCormick, M. I., and Manassa, R. (2008) Predation risk assessment by olfactory and visual cues in a coral reef fish. Coral Reefs, 27 (1). pp. 105-113.

Hamilton, R.J., Adams, S., and Choat, J.H. (2008) Sexual development and reproductive demography of the green humphead parrotfish (Bolbometopon muricatum) in the Solomon Islands. Coral Reefs, 27 (1). pp. 153-163.

Frisch, A.J., Baker, R., Hobbs, J-P. A., and Nankervis, L. (2008) A quantitative comparison of recreational spearfishing and linefishing on the Great Barrier Reef: implications for management of multi-sector coral reef fisheries. Coral Reefs, 27 (1). pp. 85-95.

Wellenreuther, Maren, Syms, Craig, and Clements, Kendall D. (2008) Consistent spatial patterns across biogeographic gradients in temperate reef fishes. Ecography, 31 (1). pp. 84-94.

Bourne, David G., Boyett, Holly V., Henderson, Meegan E., Muirhead, Andrew, and Willis, Bette L. (2008) Identification of a ciliate (Oligohymenophorea: Scuticociliatia) associated with brown band disease on corals of the Great Barrier Reef. Applied and Environmental Microbiology, 74 (3). pp. 883-888.

Lee, Anne M., Williams, Ashley J., and Southgate, Paul C. (2008) Modelling and comparison of growth of the silver-lip pearl oyster Pinctada maxima (Jameson) (Mollusca: Pteriidae) cultured in West Papua, Indonesia. Marine and Freshwater Research, 59. pp. 22-31.

Scardino, A.J., Guenther, J., and de Nys, R. (2008) Attachment point theory revisited: the fouling response to a microtextured matrix. Biofouling, 24 (1). pp. 45-53.

Harold, Antony S., Winterbottom, Richard, Munday, Philip L., and Chapman, Robert W. (2008) Phylogenetic relationships of Indo-Pacific coral gobies of the genus Gobiodon (Teleostei: Gobiidae) based on morphological and molecular data. Bulletin of Marine Science, 82 (1). pp. 119-136.

Ettinger-Epstein, Piers, Tapiolas, Dianne M., Motti, Cherie A., Wright, Anthony D., Battershill, Christopher N., and de Nys, Rocky (2008) Production of manoalide and its analogues by the sponge Luffariella variabilis is hardwired. Marine Biotechnology, 10 (1). pp. 64-74.

Skindersoe, Mette Elena, Ettinger-Epstein, Piers, Rasmussen, Thomas Bovbjerg, Bjarnsholt, Thomas, de Nys, Rocky, and Givskov, Michael (2008) Quorum sensing antagonism from marine organisms. Marine Biotechnology, 10 (1). pp. 56-63.

Jegatheesan, V., Steicke, C., Pulefou, T., Zeng, C., and Shu, L. (2008) Recirculating aquaculture systems (RAS): performance of granular media filtration and membrane bioreactors. Journal of Science, Technology and Management, 1 (1). pp. 31-45.

Evans, R.D. (2008) Assessment of an underwater biopsy probe for collecting teleost fish tissue samples. Marine Ecology Progress Series, 368. pp. 305-308.

Romano, Nicholas, and Zeng, Chaoshu (2008) Blue swimmer crabs: emerging species in Asia. Global Aquaculture Advocate, 11 (3). pp. 34-36.

Birrell, Chico L., McCook, Laurence J., Willis, Bette L., and Harrington, Lindsay (2008) Chemical effects of macroalgae on larval settlement of the broadcast spawning coral Acropora millepora. Marine Ecology Progress Series, 362. pp. 129-137.

Hobbs, J.-P.A, and Salmond, J.K. (2008) Cohabitation of Indian and Pacific Ocean species at Christmas and Cocos (Keeling) Islands. Coral Reefs, 27 (4). p. 933.

Jones, David, Jerry, Dean, McCormick, Mark, and Bay, Line (2008) Development of nine microsatellite markers for Pomacentrus amboinensis. Molecular Ecology Resources, 8 (6). pp. 1332-1334.

Gagliano, Monica, Depczynski, Martial, Simpson, Stephen D., and Moore, James A.Y. (2008) Dispersal without errors: symmetrical ears tune into the right frequency for survival. Proceedings of the Royal Society of London Series B, Biological Sciences, 275 (1634). pp. 527-534.

Beer, Andrew C., and Southgate, Paul C. (2008) Effect of mesh coverings on retention and growth of blacklip pearl oyster (Pinctada margaritifera) spat during early nursery culture. Aquatic Living Resources, 21 (4). pp. 441-445.

Birrell, Chico L., McCook, Laurence J., Willis, Bette L., and Diaz-Pulido, Guillermo A. (2008) Effects of benthic algae on the replenishment of corals and the implications for the resilience of coral reefs. Oceanography and Marine Biology: an annual review, 46. pp. 25-63.

Pratchett, Morgan S., Munday, Philip L., Wilson, Shaun K., Graham, Nicholas A.J., Cinner, Joshua E., Bellwood, David R., Jones, Geoffrey P., Polunin, Nicholas V.C., and McClanahan, Tim R. (2008) Effects of climate-induced coral bleaching on coral-reef fishes - ecological and economic consequences. Oceanography and Marine Biology: an annual review, 46. pp. 251-296.

Munday, P. L., Kingsford, M.J., O'Callaghan, M., and Donelson, J.M. (2008) Elevated temperature restricts growth potential of the coral reef fish Acanthochromis polyacanthus. Coral Reefs, 27 (4). pp. 927-931.

Whalan, S., de Nys, R., Smith-Keune, C., Evans, B.S., Battershill, C., and Jerry, D.R. (2008) Low genetic variability within and among populations of the brooding sponge Rhopaloeides odorabile on the central Great Barrier Reef. Aquatic Biology, 3 (2). pp. 111-119.

Dinsdale, Elizabeth A., Pantos, Olga, Smriga, Steven, Edwards, Robert A., Angly, Florence, Wegley, Linda, Hatay, Mark, Hall, Dana, Brown, Elysa, Haynes, Matthew, Krause, Lutz, Sala, Enric, Sandin, Stuart A., Thurber, Rebecca Vega, Willis, Bette L., Azam, Farooq, Knowlton, Nancy, and Rohwer, Forest (2008) Microbial ecology for four coral atolls in the Northern Line Islands. PLoS Biology, 3 (2). pp. 1-17.

de Santis, Christian, Evans, Brad S., Smith-Keune, Carolyn, and Jerry, Dean R. (2008) Molecular characterization, tissue expression and sequence variability of the barramundi (Lates calcarifer) myostatin gene. BMC Genomics, 9. pp. 82-96.

Anthony, S.L., Page, C.A., Bourne, D.G., and Willis, B.L. (2008) Newly characterized distinct phases of the coral disease 'atramentous necrosis' on the Great Barrier Reef. Diseases of Aquatic Organisms, 81 (3). pp. 255-259.

Gagliano, Monica (2008) On the spot: the absence of predators reveals eyespot plasticity in a marine fish. Behavioral Ecology, 19 (4). pp. 733-739.

Bellwood, David R., and Fulton, Christopher J. (2008) Sediment-mediated suppression of herbivory on coral reefs: decreasing resilience to rising sea levels and climate change. Limnology and Oceanography, 53 (6). pp. 2695-2701.

Richards, Zoe T., van Oppen, Madeleine J.H., Wallace, Carden C., Willis, Bette L., and Miller, David J. (2008) Some rare Indo-Pacific coral species are probable hybrids. Public Library of Science ONE , 3 (9). pp. 1-8.

Morote, Elvira, Olivar, M. Pilar, Pankhurst, Patricia M., Villate, Fernando, and Uriarte, Ibon (2008) Trophic ecology of bullet tuna Auxis rochei larvae and ontogeny of feeding-related organs. Marine Ecology Progress Series, 353. pp. 243-254.

Hobbs, J.P., Choat, J.H., Robbins, W.D., Van Herwerden, Lynne, Feary, D.A., and Ayling, Anthony (2008) Unique fish assemblages at world's southernmost oceanic coral reefs, Elizabeth and Middleton Reefs, Tasman Sea, Australia. Coral Reefs, 27 (1). p. 15.

van Hennekeler, K., Jones, R.E., Skerratt, L.F., Fitzpatrick, L.A., Reid, S.A., and Bellis, G.A. (2008) A comparison of trapping methods for Tabanidae (Diptera) in North Queensland, Australia. Medical and Veterinary Entomology, 22 (1). pp. 26-31.

Ettinger-Epstein, Piers, Whalan, Steve, Battershill, Christopher N., and de Nys, Rocky (2008) A hierarchy of settlement cues influences larval behaviour in a coral reef sponge. Marine Ecology Progress Series, 365. pp. 103-113.

Kingsford, Michael J., Patterson, Heather M., and Flood, Matthew J. (2008) The influence of elemental chemistry on the widths of otolith increments in the neon damselfish (Pomacentrus coelestis). Fishery Bulletin, 106 (2). pp. 135-142.

Zhang, Hua, Leung, Yolanda, Louden, Daniel, de Nys, Rocky, and Lamb, Robert (2008) The potential intrinsic and extrinsic toxicity of silica nanoparticles and its impact on marine organisms. NANO, 3 (4). pp. 271-278.

Mantyka, Chrystal S., and Bellwood, David R. (2007) Macroalgal grazing selectivity among herbivorous coral reef fishes. Marine Ecology Progress Series, 352. pp. 177-185.

Limbourn, Andrew, Jones, Geoffrey, Munday, Philip, and Srinivasan, Maya (2007) Niche shifts and local competition between two coral reef fishes at their geographic boundary. Marine and Freshwater Research, 58 (12). pp. 1120-1129.

Aswani, S., Albert, S., Sabetian, A., and Furusawa, T. (2007) Customary management as precautionary and adaptive principles for protecting coral reefs in Oceania. Coral Reefs, 26 (4). pp. 1009-1021.

Marie, A.D., van Herwerden, L., Choat, J.H., and Hobbs, J-P.A. (2007) Hybridization of reef fishes at the Indo-Pacific biogeographic barrier: a case study. Coral Reefs, 26 (4). pp. 841-850.

Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Jerry, Dean R. (2007) Population genetics of a marine bivalve, Pinctada maxima, throughout the Indo-Australian Archipelago shows differentiation and decreased diversity at range limits. Molecular Ecology, 16 (24). pp. 5193-5203.

Ettinger-Epstein, Piers, Whalan, Steve W., Battershill, Christopher N., and de Nys, Rocky (2007) Temperature cues gametogenesis and larval release in a tropical sponge. Marine Biology, 153 (2). pp. 171-178.

Whalan, S., Battershill, C., and de Nys, R. (2007) Variability in reproductive output across a water quality gradient for a tropical marine sponge. Marine Biology, 153 (2). pp. 163-169.

Hughes, Terence P., Gunderson, Lance H., Folke, Carl, Baird, Andrew H., Bellwood, David, Berkes, Fikret, Crona, Beatrice, Helfgott, Ariella, Leslie, Heather, Norberg, Jon, Nyström, Marcus, Olsson, Per, Österblom, Henrik, Scheffer, Marten, Schuttenberg, Heidi, Steneck, Robert S., Tengo, Maria, Troell, Max, Walker, Brian, Wilson, James, and Worm, Boris (2007) Adaptive management of the Great Barrier Reef and the Grand Canyon World Heritage Areas. Ambio, 36 (7). pp. 586-592.

Guenther, Jana, Walker-Smith, Genefor, Waren, Anders, and de Nys, Rocky (2007) Fouling-resistant surfaces of tropical sea stars. Biofouling, 23 (6). pp. 413-418.

Walker, S.P.W., Ryen, C.A., and McCormick, M.I. (2007) Rapid larval growth predisposes sex change and sexual size dimorphism in a protogynous hermaphrodite, Parapercis snyderi Jordan & Starks 1905. Journal of Fish Biology, 71 (5). pp. 1347-1357.

Frisch, A.J., Walker, S.P.W., McCormick, M.I., and Solomon-Lane, T.K. (2007) Regulation of protogynous sex change by competition between corticosteroids and androgens: an experimental test using sandperch, Parapercis cylindrica. Hormones and Behavior, 52 (4). pp. 540-545.

Visentini Kitahara, Marcelo (2007) Species richness and distribution of azooxanthellate Scleractinia in Brazil. Bulletin of Marine Science, 81 (3). pp. 497-518.

Guenther, Jana, and de Nys, Rocky (2007) Surface microtopographies of tropical sea stars: lack of an efficient physical defence mechanism against fouling. Biofouling, 23 (6). pp. 419-429.

Jegatheesan, V., Zeng, C., Shu, L., Manicom, C., and Steicke, C. (2007) Technological advances in aquaculture farms for minimal effluent discharge to oceans. Journal of Cleaner Production, 15 (16). pp. 1535-1544.

Sheaves, Marcus, Johnston, Ross, and Abrantes, Kátya (2007) Fish fauna of dry tropical and subtropical estuarine floodplain wetlands. Marine and Freshwater Research, 58 (10). pp. 931-943.

Baird, Andrew H., Cumbo, Vivian R., Leggat, Bill, and Rodriguez-Lanetty, Mauricio (2007) Fidelity and flexibility in coral symbioses. Marine Ecology Progress Series, 347. pp. 307-309.

Chidlow, Justin A., Simpfendorfer, Colin A., and Russ, Garry R. (2007) Variable growth band deposition leads to age and growth uncertainty in the western wobbegong shark, Orectolobus hutchinsi. Marine and Freshwater Research, 58 (9). pp. 856-865.

Louden, D., Inderbitzin, Stefanie, Peng, Z., and de Nys, R. (2007) Development of a new protocol for testing bath sponge quality. Aquaculture, 271 (1-4). pp. 275-285.

Collins, A.B., Heupel, M.R., and Motta, P.J. (2007) Residence and movement patterns of cownose rays Rhinoptera bonasus within a south-west Florida estuary. Journal of Fish Biology, 71 (4). pp. 1159-1178.

Louden, D., Whalan, S., Evans-Illidge, E., Wolff, C., and de Nys, R. (2007) An assessment of the aquaculture potential of the tropical sponges Rhopaloeides odorabile and Coscinoderma sp. Aquaculture, 270 (1-4). pp. 57-67.

Johansen, J.L., Fulton, C.J., and Bellwood, D.R. (2007) Avoiding the flow: refuges expand the swimming potential of coral reef fishes. Coral Reefs, 26 (3). pp. 577-583.

McCormick, M.I., and Larson, J.K. (2007) Field verification of the use of chemical alarm cues in a coral reef fish. Coral Reefs, 26 (3). pp. 571-576.

Feary, David A., Almany, Glenn R., McCormick, Mark I., and Jones, Geoffrey P. (2007) Habitat choice, recruitment and the response of coral reef fishes to coral degradation. Oecologia, 153 (3). pp. 727-737.

Pagliano, Paul J., Zambone, Alana M., and Kelley, Pat (2007) Helping children with visual impairment develop humour: a review of the literature. British Journal of Visual Impairment, 25 (3). pp. 267-279.

Hoey, J., McCormick, M.I., and Hoey, A.S. (2007) Influence of depth on sex-specific energy allocation patterns in a tropical reef fish. Coral Reefs, 26 (3). pp. 603-613.

Walker, S.P.W., and Ryen, C. (2007) Opportunistic hybridization between two congeneric tropical reef fish. Coral Reefs, 26 (3). p. 539.

Jones, Geoffrey P., Srinivasan, Maya, and Almany, Glenn R. (2007) Population connectivity and conservation of marine biodiversity. Oceanography, 20 (3). pp. 100-111.

Whalan, S., Battershill, C., and de Nys, R. (2007) Sexual reproduction of the brooding sponge Rhopaloeides odorabile. Coral Reefs, 26 (3). pp. 655-663.

Adjeroud, Mehdi, Pratchett, Morgan, Kospartov, Marie, Lejeusne, Christophe, and Penin, Lucie (2007) Small-scale variability in the size structure of scleractinian corals around Moorea, French Polynesia: patterns across depths and locations. Hydrobiologia, 589 (1). pp. 117-126.

Munkres, Katherine P., Bay, Line K., Jerry, Dean R., McCormick, Mark I., and van Herwerden, Lynne (2007) Development and characterization of microsatellite markers for parentage analyses of the coral reef damselfish (Pomacentrus amboinensis: Pomacentridae). Conservation Genetics, 8 (4). pp. 987-990.

Sherbrooke, Wade C., Scardino, Andrew J., de Nys, Rocky, and Schwarzkopf, Lin (2007) Functional morphology of scale hinges used to transport water: convergent drinking adaptations in desert lizards (Moloch horridus and Phrynosoma cornutum). Zoomorphology, 126 (2). pp. 89-102.

Depczynski, Martial, Fulton, Christopher J., Marnane, Michael J., and Bellwood, David R. (2007) Life history patterns shape energy allocation among fishes on coral reefs. Oecologia, 153 (1). pp. 111-120.

Sheaves, Marcus, Abrantes, Katya, and Johnston, Ross (2007) Nursery ground value of an endangered wetland to juvenile shrimps. Wetlands Ecology and Management, 15 (4). pp. 311-327.

Lukoschek, V., Waycott, M., and Marsh, H. (2007) Phylogeography of the olive sea snake, Aipysurus laevis (Hydrophiinae) indicates Pleistocene range expansion around northern Australia but low contemporary gene flow. Molecular Ecology, 16 (16). pp. 3406-3422.

Bannister, R.J., Brinkman, R., Wolff, C., Battershill, C., and de Nys, R. (2007) The distribution and abundance of dictyoceratid sponges in relation to hydrodynamic features: identifying candidates and environmental conditions for sponge aquaculture. Marine and Freshwater Research, 58 (7). pp. 624-633.

Gagliano, Monica, McCormick, Mark I., and Meekan, Mark G. (2007) Survival against the odds: ontogenetic changes in selective pressure mediate growth-mortality trade-offs in a marine fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 274 (1618). pp. 1575-1582.

Chong, Caroline, Edwards, Will, and Waycott, Michelle (2007) Differences in resprouting ability are not related to seed size or seedling growth in four riparian woody species. Journal of Ecology, 95 (4). pp. 840-850.

Heupel, M.R., and Bennett, M.B. (2007) Estimating abundance of reef-dwelling sharks: a case study of the epaulette Shark, Hemiscyllium ocellatum (Elasmobranchii: Hemiscyllidae). Pacific Science, 61 (3). pp. 383-394.

Almany, Glenn R., Peacock, Lisa F., Syms, Craig, McCormick, Mark I., and Jones, Geoffrey P. (2007) Predators target rare prey in coral reef fish assemblages. Oecologia, 152 (4). pp. 751-761.

Sampey, A., McKinnon, A.D., Meekan, M.G., and McCormick, M.I. (2007) Glimpse into guts: overview of the feeding of larvae of tropical shorefishes. Marine Ecology Progress Series, 339. pp. 243-257.

Fox, Rebecca J., and Bellwood, David R. (2007) Quantifying herbivory across a coral reef depth gradient. Marine Ecology Progress Series, 339. pp. 49-59.

Endo, Tetsuya, Yong-Un, Ma, Baker, C. Scott, Funahashi, Naoko, Lavery, Shane, Dalebout, Merel L., Lukoschek, Vimoksalehi, and Haraguchi, Koichi (2007) Contamination level of mercury in red meat products from cetaceans available from South Korea markets. Marine Pollution Bulletin, 54 (6). pp. 669-677.

Mantyka, C.S., and Bellwood, D.R. (2007) Direct evaluation of macroalgal removal by herbivorous coral reef fishes. Coral Reefs, 26 (2). pp. 435-442.

Lukoschek, V., Heatwole, H., Grech, A., Burns, G., and Marsh, H. (2007) Distribution of two species of sea snakes, Aipysurus laevis and Emydocephalus annulatus, in the southern Great Barrier Reef: metapopulation dynamics, marine protected areas and conservation. Coral Reefs, 26 (2). pp. 291-307.

McCormick, Mark I., and Meekan, Mark G. (2007) Social facilitation of selective mortality. Ecology, 88 (6). pp. 1562-1570.

Fulton, C.J. (2007) Swimming speed performance in coral reef fishes: field validations reveal distinct functional groups. Coral Reefs, 26 (2). pp. 217-228.

Underwood, Avril H., and Seymour, Jamie E. (2007) Venom ontogeny, diet and morphology in Carukia barnesi, a species of Australian box jellyfish that causes Irukandji syndrome. Toxicon, 49 (8). pp. 1073-1082.

Sheaves, Marcus, Johnston, Ross, Molony, Brett, and Shephard, Greg (2007) The effect of impoundments on the structure and function of fish fauna in a highly regulated dry tropics estuary. Estuaries and Coasts, 30 (3). pp. 507-517.

Bruno, John F., Selig, Elizabeth R., Casey, Kenneth S., Page, Cathie A., Willis, Bette L., Harvell, C. Drew, Sweatman, Hugh, and Melendy, Amy M. (2007) Thermal stress and coral cover as drivers of coral disease outbreaks. Public Library of Science Biology, 5 (6). 0001-0008.

Almany, Glenn R. , Berumen, Michael L., Thorrold, Simon R., Planes, Serge, and Jones, Geoffrey P. (2007) Local replenishment of coral reef fish populations in a marine reserve. Science, 316 (5825). pp. 742-744.

Gagliano, Monica, McCormick, Mark I., and Meekan, Mark G. (2007) Temperature-induced shifts in selective pressure at a critical developmental transition. Oecologia, 152 (2). pp. 219-225.

Wong, Marian Y.L., Buston, Peter M., Munday, Philip L., and Jones, Geoffrey P. (2007) The threat of punishment enforces peaceful cooperation and stabilizes queues in a coral-reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 274 (1613). pp. 1093-1099.

Ettinger-Epstein, Piers, Motti, Cherie A., de Nys, Rocky, Wright, Anthony D., Battershill, Christopher N., and Tapiolas, Dianne M. (2007) Acetylated Sesterterpenes from the Great Barrier Reef sponge Luffariella variabilis. Journal of Natural Products, 70 (4). pp. 648-651.

Patterson, Heather M., and Swearer, Stephen E. (2007) Long-distance dispersal and local retention of larvae as mechanisms of recruitment in an island population of a coral reef fish. Austral Ecology, 32 (2). pp. 122-130.

Job, Suresh, and Bellwood, David R. (2007) Ultraviolet photosensitivity and feeding in larval and juvenile coral reef fishes. Marine Biology, 151 (2). pp. 495-503.

Feary, David A., Almany, Glenn R., Jones, Geoffrey P., and McCormick, Mark I. (2007) Coral degradation and the structure of tropical reef fish communities. Marine Ecology Progress Series, 333. pp. 243-248.

Johansen, J.L., Fulton, C.J., and Bellwood, D.R. (2007) Estimating the sustained swimming ability of coral reef fishes. Marine and Freshwater Research, 58 (3). pp. 233-239.

Anthony, Kenneth R.N., Connolly, Sean R., and Hoegh-Guldberg, Ove (2007) Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime. Limnology and Oceanography, 52 (2). pp. 716-726.

Thompson, V.J., Munday, P.L., and Jones, G.P. (2007) Habitat patch size and mating system as determinants of social group size in coral-dwelling fishes. Coral Reefs, 26 (1). pp. 165-174.

Carton, A.G., Jeffs, A.G., Foote, G., Palmer, H., and Bilton, J. (2007) Evaluation of methods for assessing the retention of seed mussels (Perna canaliculus) prior to seeding for grow-out. Aquaculture, 262 (2-4). pp. 521-527.

Hughes, Terence P., Rodrigues, Maria J., Bellwood, David R., Ceccarelli, Daniela, Hoegh-Guldberg, Ove, McCook, Laurence, Moltschaniwskyj, Natalie, Pratchett, Morgan S., Steneck, Robert S., and Willis, Bette (2007) Phase shifts, herbivory, and the resilience of coral reefs to climate change. Current Biology, 17 (4). pp. 360-365.

Nylund, G.M., Gribben, P.E., de Nys, Rocky, Steinberg, P.D., and Pavia, H. (2007) Surface chemistry versus whole-cell extracts: antifouling tests with seaweed metabolites. Marine Ecology Progress Series, 329. pp. 73-84.

Gagliano, Monica, and McCormick, Mark (2007) Compensating in the wild: is flexible growth the key to early juvenile survival? Oikos, 116 (1). pp. 111-120.

Klanten, Selma, Choat, J. Howard, and van Herwerden, Lynne (2007) Extreme genetic diversity and temporal rather than spatial partitioning in a widely distributed coral reef fish. Marine Biology, 150 (4). pp. 659-670.

Gagliano, Monica, and McCormick, Mark I. (2007) Maternal condition influences phenotypic selection on offspring. Journal of Animal Ecology, 76 (1). pp. 174-182.

Hughes, Terry P., Bellwood, David R., Folke, Carl S., McCook, Laurence J., and Pandolfi, John M. (2007) No-take areas, herbivory and coral reef resilience. Trends in Ecology & Evolution, 22 (1). pp. 1-3.

Luter, Heidi M., Duckworth, Alan R., and Syms, Craig (2007) Cytotoxic and anti-microbial activity of the sponge Iotrochota sp. as a function of size and spatial competitors. Marine Biology Research, 3 (5). pp. 312-318.

Guenther, Jana, Heimann, Kirsten, and de Nys, Rocky (2007) Pedicellariae of the crown-of-thorns sea star Acanthaster planci are not an effective defence against fouling. Marine Ecology Progress Series, 340. pp. 101-108.

Frisch, A.J., McCormick, M.I., and Pankhurst, N.W. (2007) Reproductive periodicity and steroid hormone profiles in the sex-changing coral-reef fish, Plectropomus leopardus. Coral Reefs, 26 (1). pp. 189-197.

Yaakub, S.M., Bellwood, D.R., and van Herwerden, L. (2007) A rare hybridization event in two common Caribbean wrasses (genus Halichoeres; family Labridae). Coral Reefs, 26 (3). pp. 597-602.

Jones, Geoffrey P., Santana, Lara, McCook, Laurence J., and McCormick, Mark I. (2006) Resource use and impact of three herbivorous damselfishes on coral reef communities. Marine Ecology Progress Series, 328. pp. 215-224.

Bellwood, David R., Hughes, Terry P., and Hoey, Andrew S. (2006) Sleeping functional group drives coral-reef recovery. Current Biology, 16 (24). pp. 2434-2439.

Robbins, William D., Hisano, Mizue, Connolly, Sean R., and Choat, J. Howard (2006) Ongoing collapse of coral-reef shark populations. Current Biology, 16 (23). pp. 2314-2319.

Frost, Lewis A., Evans, Brad S., and Jerry, Dean R. (2006) Loss of genetic diversity due to hatchery culture practices in barramundi (Lates calcarifer). Aquaculture, 261 (3). pp. 1056-1064.

Smith-Keune, C., Jerry, D.R., Evans, B.S., McCormick, M.I., Munday, P.L., and Jones, G.P. (2006) Development and characterization of eight new microsatellite markers for the haremic sandperch, Parapercis cylindrica (family Pinguipedidae). Molecular Ecology Resources, 6 (4). pp. 1036-1038.

Depczynski, Martial, and Bellwood, David R. (2006) Extremes, plasticity, and invariance in vertebrate life history traits: insights from coral reef fishes. Ecology, 87 (12). pp. 3119-3127.

Frisch, Ashley, and Hobbs, Jean-Paul (2006) Long-term retention of internal elastomer tags in a wild population of painted crayfish (Panulirus versicolor [Latreille]) on the Great Barrier Reef. Journal of Experimental Marine Biology and Ecology, 339 (1). pp. 104-110.

Madin, Joshua S., and Connolly, Sean R. (2006) Ecological consequences of major hydrodynamic disturbances on coral reefs. Nature, 444 (7118). pp. 477-480.

van Herwerden, L., Choat, J.H., Dudgeon, C.L., Carlos, G., Newman, S.J., Frisch, A., and van Oppen, M. (2006) Contrasting patterns of genetic structure in two species of the coral trout Plectropomus (Serranidae) from east and west Australia: introgressive hybridisation or ancestral polymorphisms. Molecular Phylogenetics and Evolution, 41 (2). pp. 420-435.

Srinivasan, M., and Jones, G.P. (2006) Extended breeding and recruitment periods of fishes on a low latitude coral reef. Coral Reefs, 25 (4). pp. 673-682.

Madin, Joshua S., Black, Kerry P., and Connolly, Sean R. (2006) Scaling water motion on coral reefs: from regional to organismal scales. Coral Reefs, 25 (4). pp. 635-644.

Paul, Nicholas A., de Nys, Rocky, and Steinberg, Peter D. (2006) Seaweed-herbivore interactions at a small scale: direct tests of feeding deterrence by filamentous algae. Marine Ecology Progress Series, 323. pp. 1-9.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Consequences of inappropriate criteria for accepting age estimates from otoliths, with a case study for a long-lived tropical reef fish. Canadian Journal of Fisheries and Aquatic Sciences, 63 (10). pp. 2259-2274.

McCormick, Mark (2006) Distress a normal part of life for a damsel. Australasian Science, 27. pp. 29-31.

Huggett, Megan J., Williamson, Jane E., de Nys, Rocky, Kjelleberg, Staffan, and Steinberg, Peter D. (2006) Larval settlement of the common Australian sea urchin Heliocidaris erythrogramma in response to bacteria from the surface of coralline algae. Oecologia, 149 (4). pp. 604-619.

Romano, Nicholas, and Zeng, Chaoshu (2006) The effects of salinity on the survival, growth and haemolymph osmolality of early juvenile blue swimmer crabs, Portunus pelagicus. Aquaculture, 260. pp. 151-162.

Barnett, Adam, Bellwood, David R., and Hoey, Andrew S. (2006) Trophic ecomorphology of cardinalfish. Marine Ecology Progress Series, 322. pp. 249-257.

Bellwood, David R, Hoey, Andrew S, Ackerman, John L, and Depczynski, Martial (2006) Coral bleaching, reef fish community phase shifts and the resilience of coral reefs. Global Change Biology, 12 (9). pp. 1587-1594.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Geographic influences on and the accuracy and precision of age estimates for the red bass, Lutjanus bohar (Forsskal 1775): a large tropical reef fish. Fisheries Research, 80 (2-3). pp. 322-328.

Kvingedal, Renate, Owens, Leigh, and Jerry, Dean R. (2006) A new parasite that infects eggs of the mud crab, Scylla serrata, in Australia. Journal of Invertebrate Pathology, 93 (1). pp. 54-59.

Choat, J.H., Davies, C.R., Ackerman, J.L., and Mapstone, B.D. (2006) Age structure and growth in a large teleost, Cheilinus undulatus, with a review of size distribution in labrid fishes. Marine Ecology Progress Series, 318. pp. 237-246.

Hughes, T.P., Berkes, F, Steneck, R.S., Wilson, J.A.., Bellwood, D.R., Crona, B, Folke, C., Gunderson, LH, Leslie, HM, Norberg, J., Nystrom, M., Olsson, P., Osterblom, H., Scheffer, M., and Worm, B. (2006) Keeping bandits at bay? Response. Science, 313 (5787). pp. 612-614.

Blair, D., Waycott, M., Byrne, L., Dunshea, G., Smith-Keune, C., and Neil, K.M. (2006) Molecular discrimination of Perna (Mollusca: Bivalvia) species using the polymerase chain reaction and species-specific mitochondrial primers. Marine Biotechnology, 8 (4). pp. 380-385.

van Herwerden, Lynne, McIlwain, Jenny, Al-Oufi, Hamed, Al-Amry, Wahida, and Reyes, Alejandro (2006) Development and application of microsatellite markers for Scomberomorus commerson (Perciformes; Teleostei) to a population genetic study of Arabian Peninsula stocks. Fisheries Research, 79 (3). pp. 258-266.

Yaakub, Siti M., Bellwood, David R., van Herwerden, Lynne, and Walsh, Fenton M. (2006) Hybridization in coral reef fishes: introgression and bi-directional gene exchange in Thalassoma (family Labridae). Molecular Phylogenetics and Evolution, 40 (1). pp. 84-100.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul C. (2006) Use of microbound diets in larval culture of the mud crab, Scylla serrata. Aquaculture, 257. pp. 482-490.

Martínez-Fernández, Erika, Acosta-Salmon, Héctor, and Southgate, Paul C. (2006) The nutritional value of seven species of tropical microalgae for black-lip pearl oyster (Pinctada margaritifera L.) larvae. Aquaculture, 257 (1-4). pp. 491-503.

Nardi, Kim, Newman, Stephen J., Moran, Michael J., and Jones, Geoffrey P. (2006) Vital demographic statistics and management of the baldchin groper (Choerodon rubescens) from the Houtman Abrolhos Islands. Marine and Freshwater Research, 57 (5). pp. 485-496.

Thorrold, Simon R., Jones, Geoffrey P., Planes, Serge, and Hare, Jonathan H. (2006) Transgenerational marking of embryonic otoliths in marine fishes using barium stable isotopes. Canadian Journal of Fisheries and Aquatic Sciences, 63 (6). pp. 1193-1197.

Graham, Nicholas A.J., Wilson, Shaun K., Jennings, Simon, Polunin, Nicholas V.C., Bijoux, Jude P., and Robinson, Jan (2006) Dynamic fragility of oceanic coral reef ecosystems. National Academy of Sciences. Proceedings, 103 (22). pp. 8425-8429.

Hoogenboom, Mia O., Anthony, Kenneth R.N., and Connolly, Sean R. (2006) Energetic cost of photoinhibition in corals. Marine Ecology Progress Series, 313. pp. 1-12.

McCormick, Mark I. (2006) Mothers matter: crowding leads to stressed mothers and smaller offspring in marine fish. Ecology, 87 (5). pp. 1104-1109.

Paul, Nicholas A., Cole, Louise, de Nys, Rocky, and Steinberg, Peter D. (2006) Ultrastructure of the gland cells of the red alga Asparagopsis armata (Bonnemaisoniaceae). Journal of Phycology, 42 (3). pp. 637-645.

Robbins, William D. (2006) Evaluation of two underwater biopsy probes for in situ collection of shark tissue samples. Marine Ecology Progress Series, 310. pp. 213-217.

Frisch, A., and van Herwerden, L. (2006) Field and experimental studies of hybridization between coral trouts, Plectropomus leopardus and Plectropomus maculatus (Serranidae), on the Great Barrier Reef, Australia. Journal of Fish Biology, 68 (4). pp. 1013-1025.

Guenther, J., Southgate, P.C., and de Nys, R. (2006) The effect of age and shell size on accumulation of fouling organisms on the Akoya pearl oyster Pinctada fucata (Gould). Aquaculture, 253 (1). pp. 366-373.

Berkes, F., Hughes, T.P., Steneck, R.S., Wilson, J.A., Bellwood, D.R., Crona, B., Folke, C., Gunderson, L.H., Leslie, H.M., Norberg, J., Nyström, M., Olsson, P., Österblom, H., Scheffer, M., and Worm, B. (2006) Globalization, roving bandits, and marine resources. Science, 311 (5767). pp. 1557-1558.

Dornelas, Maria, Connolly, Sean R., and Hughes, Terrence P. (2006) Coral reef diversity refutes the neutral theory of biodiversity. Nature, 440 (7080). pp. 80-82.

Read, Charmine I., Bellwood, David R., and van Herwerden, Lynne (2006) Ancient origins of Indo-Pacific coral reef fish biodiversity: a case study of the leopard wrasses (Labridae: Macropharyngodon). Molecular Phylogenetics and Evolution, 38 (3). pp. 808-819.

Pratchett, Morgan S., Pradjakusuma, Oki. A., and Jones, Geoffrey P. (2006) Is there a reproductive basis to solitary living versus pair-formation in coral reef fishes? Coral Reefs, 25 (1). pp. 85-92.

McCormick, M.I., and Holmes, T.H. (2006) Prey experience of predation influences mortality rates at settlement in a coral reef fish, Pomacentrus amboinensis. Journal of Fish Biology, 68 (3). pp. 969-974.

Munday, Philip L., Buston, Peter M., and Warner, Robert R. (2006) Diversity and flexibility of sex-change strategies in animals. Trends in Ecology and Evolution, 21 (2). pp. 89-95.

Paul, N.A., de Nys, Rocky, and Steinberg, P.D. (2006) Chemical defence against bacteria in the red alga Asparagopsis armata: linking structure with function. Marine Ecology Progress Series, 306. pp. 87-101.

Green, Bridget S., Anthony, Kenneth R.N., and McCormick, Mark I. (2006) Position of egg within a clutch is linked to size at hatching in a demersal tropical fish. Journal of Experimental Marine Biology and Ecology, 329 (1). pp. 144-152.

Scardino, A.J., Harvey, E., and de Nys, R. (2006) Testing attachment point theory: diatom attachment on microtextured polyimide bioimics. Biofouling, 22 (1). pp. 55-60.

Guenther, J., and de Nys, R. (2006) Differential community development of fouling species on the pearl oysters Pinctada fucata, Pteria penguin and Pteria chinensis (Bivalvia, Pteriidae). Biofouling, 22 (3). pp. 163-171.

Bellwood, D.R., Wainwright, P.C., Fulton, C.J., and Hoey, A.S. (2006) Functional versatility supports coral reef biodiversity. Proceedings of the Royal Society of London Series B: biological sciences, 273 (1582). pp. 101-107.

Heupel, M.R., Semmens, J.M., and Hobday, A.J. (2006) Automated acoustic tracking of aquatic animals: scales, design and deployment of listening station arrays. Marine and Freshwater Research, 57. pp. 1-13.

Wright, Anthony D., de Nys, Rocky, Angerhofer, Cindy K., Pezzuto, John M., and Gurrath, Marion (2006) Biological activities and 3D QSAR studies of a series of Delisea pulchra (cf. fimbriata) derived natural products. Journal of Natural Products, 69 (8). pp. 1180-1187.

Dworjanyn, S.A., de Nys, R., and Steinberg, P.D. (2006) Chemically mediated antifouling in the red alga Delisea pulchra. Marine Ecology Progress Series, 318. pp. 153-163.

van Herwerden, L., and Doherty, P.J. (2006) Contrasting genetic structures across two hybrid zones of a tropical reef fish, Acanthochromis polyacanthus (Bleeker 1855). Journal of Evolutionary Biology, 19 (1). pp. 239-252.

Genodepa, J., Southgate, P.C., and Zeng, C. (2006) Determining ingestion of microbound diet particles by mud crab, Scylla serrata, larvae. Journal of Fisheries and Aquatic Science, 1 (3). pp. 244-252.

Bassett, Daniel K., Carton, Alexander G., and Montgomery, John C. (2006) Flowing water decreases hydrodynamic signal detection in a fish with an epidermal lateral-line system. Marine and Freshwater Research, 57 (6). pp. 611-617.

Ballagh, Aaron C., Begg, Gavin A., Mapleston, Amos, and Tobin, Andrew (2006) Growth trends of Queensland east coast Spanish mackerel (Scomberomorus commerson) from otolith back-calculations. Marine and Freshwater Research, 57 (4). pp. 383-393.

Holmes, Thomas H., and McCormick, Mark I. (2006) Location influences size-selective predation on newly settled reef fish. Marine Ecology Progress Series, 317. pp. 203-209.

Hoolihan, John P., Anandh, Prem, and van Herwerden, Lynne (2006) Mitochondrial DNA analyses of narrow-barred Spanish mackerel (Scomberomorus commerson) suggest a single genetic stock in the ROPME sea area (Arabian Gulf, Gulf of Oman, and Arabian Sea). ICES Journal of Marine Science, 63 (6). pp. 1066-1074.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul (2006) Towards development of formulated diets for mud crab larvae and a better understanding of their nutritional requirements. Aqua Feeds: Formulation & beyond, 3 (1). pp. 3-6.

Gagliano, M., Kowalewski, S., and McCormick, M.I. (2006) An alternative method for the preservation of tropical fish larvae. Journal of Fish Biology, 68 (2). pp. 634-639.

Gardiner, Naomi M., and Jones, Geoffrey P. (2005) Habitat specialisation and overlap in a guild of coral reef cardinalfishes (Apogonidae). Marine Ecology Progress Series, 305. pp. 163-175.

Behrensmeyer, Anna K., Fursich, Franz T., Gastaldo, Robert A., Kidwell, Susan M., Kosnik, Matthew A., Kowalewski, Michal, Plotnick, Roy E., Rogers, Raymond R., and Alroy, John (2005) Are the most durable shelly taxa also the most common in the marine fossil record? Paleobiology, 31 (4). pp. 607-623.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Effects of territorial damselfish on an algal-dominated coastal coral reef. Coral Reefs, 24 (4). pp. 606-620.

Lukoschek, Vimoksalehi, Waycott, Michelle, and Dunshea, Glenn (2005) Isolation and characterization of microsatellite loci from the Australasian sea snake, Aipysurus laevis. Molecular Ecology Resources, 5 (4). pp. 879-881.

Depczynski, Martial, and Bellwood, David R. (2005) Wave energy and spatial variability in community structure of small cryptic coral reef fishes. Marine Ecology Progress Series, 303. pp. 283-293.

Fraser, M.R., and de Nys, R. (2005) The morphology and occurrence of jaw and operculum deformities in cultured barramundi (Lates calcarifer) larvae. Aquaculture, 250 (1-2). pp. 496-503.

Baird, Andrew H., Campbell, Stuart J., Anggoro, Aji W., Ardiwijaya, Rizya L., Fadli, Nur, Herdiana, Yudi, Kartawijaya, Tasrif, Mahyiddin, Dodent, Mukminin, Ahmad, Pardede, Shinta T., Pratchett, Morgan S., Rudi, Edi, and Siregar, Achis M. (2005) Acehnese reefs in the wake of the Asian tsunami. Current Biology, 15 (21). pp. 1926-1930.

Hixon, Mark A., and Jones, Geoffrey P. (2005) Competition, predation, and density-dependent mortality in demersal marine fishes. Ecology, 86 (11). pp. 2847-2859.

Pratchett, Morgan S. (2005) Dynamics of an outbreak population of Acanthaster planci at Lizard Island, northern Great Barrier Reef (1995–1999). Coral Reefs, 24 (3). pp. 453-462.

Patterson, Heather M., and Kingsford, Michael J. (2005) Elemental signatures of Acanthochromis polyacanthus otoliths from the Great Barrier Reef have significant temporal, spatial, and between-brood variation. Coral Reefs, 24 (3). pp. 360-369.

Kerr, Alexander M. (2005) Molecular and morphological supertree of stony corals (Anthozoa: Scleractinia) using matrix representation parsimony. Biological Reviews, 80 (4). pp. 543-558.

Yakovleva, Irina M., and Baird, Andrew H. (2005) Ontogenetic change in the abundance of mycosporine-like amino acids in non-zooxanthellate coral larvae. Coral Reefs, 24 (3). pp. 443-452.

Barnett, A., and Bellwood, D.R. (2005) Sexual Dimorphism in the buccal cavity of paternal mouthbrooding cardinalfishes (Pisces: Apogonidae). Marine Biology, 148 (1). pp. 205-212.

Abesamis, Rene A., and Russ, Garry R. (2005) Density-dependent spillover from a marine reserve: long-term evidence. Ecological Applications, 15 (5). pp. 1798-1812.

Messmer, Vanessa, Jones, Geoffrey P., van Herwerden, Lynne, and Munday, Philip L. (2005) Genetic and ecological characterisation of colour dimorphism in a coral reef fish. Environmental Biology of Fishes, 74 (2). pp. 175-183.

Wong, Marian Y.L., Munday, Philip L., and Jones, Geoffrey P. (2005) Habitat patch size, facultative monogamy and sex change in a coral-dwelling fish, Caracanthus unipinna. Environmental Biology of Fishes, 74 (2). pp. 141-150.

Gui-Zhong, Wang, Shao-Jing, Li, Chao-shu, Zeng, Shu-Jun, Lin, Xiang-Hui, Kong, Chun-Xiang, Ai, and Qiong-Wu, Lin (2005) Status of biological studies and aquaculture development of the mud crab, scylla serrata, in China: an experimental ecological studies. Aquaculture International, 13 (5). pp. 459-468.

Fisher, Rebecca, Leis, Jeffrey M., Clark, Domine L., and Wilson, Shaun K. (2005) Critical swimming speeds of late-stage coral reef fish larvae: variation within species, among species and between locations. Marine Biology, 147 (5). pp. 1201-1212.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Foragers versus farmers: contrasting effects of two behavioural groups of herbivores on coral reefs. Oecologia, 145 (3). pp. 445-453.

Huggett, Megan J., de Nys, Rocky, Williamson, Jane E., Heasman, Mike, and Steinberg, Peter D. (2005) Settlement of larval blacklip abalone, Haliotis rubra, in response to green and red macroalgae. Marine Biology, 147 (5). pp. 1155-1163.

Acosta-Salmon, Hector, and Southgate, Paul C. (2005) Histological changes in the gonad of the blacklip pearl oyster (Pinctada margaritifera Linnaeus, 1758) during the reproductive season in North Queensland, Australia. Molluscan Research, 25 (2). pp. 71-74.

Connolly, Sean R., Hughes, Terry P., Bellwood, David R., and Karlson, Ronald H. (2005) Community structure of corals and reef fishes at multiple scales. Science, 309 (5739). pp. 1363-1365.

Crossman, David J., Choat, J. Howard, and Clements, Kendall D. (2005) Nutritional ecology of nominally herbivorous fishes on coral reefs. Marine Ecology Progress Series, 296. pp. 129-142.

Kroon, Frederiecke J., Munday, Philip L., Westcott, David A., Hobbs, Jean-Paul A., and Liley, N. Robin (2005) Aromatase pathway mediates sex change in each direction. Proceedings of the Royal Society of London Series B, Biological Sciences, 272 (1570). pp. 1399-1405.

Wittenrich, Matthew L., and Munday, Philip L. (2005) Bi-directional sex change in coral reef fishes from the family Pseudochromidae: an experimental evaluation. Zoological Science, 22 (7). pp. 797-803.

Hughes, Terence P., Bellwood, David R., Folke, Carl, Steneck, Robert S., and Wilson, James (2005) New paradigms for supporting the resilience of marine ecosystems. Trends in Ecology and Evolution, 20 (7). pp. 380-386.

Connolly, Sean R. (2005) Process-based models of species distributions and the mid-domain effect. American Naturalist, 166 (1). pp. 1-11.

Robertson, D.R., Ackerman, J.L., Choat, J.H., Posada, J.M., and Pitt, J. (2005) Ocean surgeonfish Acanthurus bahianus. I. The geography of demography. Marine Ecology Progress Series, 295. pp. 229-244.

Robertson, D.R., Choat, J.H., Posada, J.M., Pitt, J., and Ackerman, J.L. (2005) Ocean surgeonfish Acanthurus bahianus. II. Fishing effects on longevity, size and abundance? Marine Ecology Progress Series, 295. pp. 245-256.

Bellwood, D.R., Hughes, T.P., Connolly, S.R., and Tanner, J. (2005) Environmental and geometric constraints on Indo-Pacific coral reef biodiversity. Ecology Letters, 8 (6). pp. 643-651.

Bergenius, Mikaela A.J., McCormick, Mark I., Meekan, Mark G., and Robertson, D. Ross (2005) Environmental influences on larval duration, growth and magnitude of settlement of a coral reef fish. Marine Biology, 147 (2). pp. 291-300.

Patterson, Heather M., Kingsford, Michael J., and McCulloch, Malcolm T. (2005) Resolution of the early life history of a reef fish using otolith chemistry. Coral Reefs, 24 (2). pp. 222-229.

Marquis, C.P., Baird, A.H., de Nys, R., Holmström, C., and Koziumi, N. (2005) An evaluation of the antimicrobial properties of the eggs of 11 species of scleractinian corals. Coral Reefs, 24 (2). pp. 248-253.

Westneat, Mark W., Alfaro, Michael E., Wainwright, Peter C., Bellwood, David R., Grubich, Justin R., Fessler, Jennifer L., Clements, Kendall D., and Smith, Lydia L. (2005) Local phylogenetic divergence and global evolutionary convergence of skull function in reef fishes of the family Labridae. Proceedings of the Royal Society of London Series B, Biological Sciences, 272 (1567). pp. 993-1000.

Acosta-Salmón, Héctor, and Southgate, Paul C. (2005) Mantle regeneration in the pearl oysters Pinctada fucata and Pinctada margaritifera. Aquaculture, 246 (1-4). pp. 447-453.

Acosta-Salmón, Héctor, Martínez-Fernández, Erika, and Southgate, Paul C. (2005) Use of relaxants to obtain saibo tissue from the blacklip pearl oyster (Pinctada margaritifera) and the Akoya pearl oyster (Pinctada fucata). Aquaculture, 246 (1-4). pp. 167-172.

Russ, Garry R., Stockwell, Brian, and Alcala, Angel C. (2005) Inferring versus measuring rates of recovery in no-take marine reserves. Marine Ecology Progress Series, 292. pp. 1-12.

Baker, Ronald, and Sheaves, Marcus (2005) Redefining the piscivore assemblage of shallow estuarine nursery habitats. Marine Ecology Progress Series, 291. pp. 197-213.

Depczynski, Martial, and Bellwood, David R. (2005) Shortest recorded vertebrate lifespan found in a coral reef fish. Current Biology, 15 (8). pp. 288-289.

Fulton, C.J., Bellwood, D.R., and Wainwright, P.C. (2005) Wave energy and swimming performance shape coral reef fish assemblages. Proceedings of the Royal Society of London Series B, Biological Sciences, 272 (1565). pp. 827-832.

Begg, Gavin A., Mapstone, Bruce D., Williams, Ashley J., Adams, Samantha, Davies, Campbell R., and Lou, Dong C. (2005) Multivariate life-history indices of exploited coral reef fish populations used to measure the performance of no-take zones in a marine protected area. Canadian Journal of Fisheries and Aquatic Sciences, 62 (3). pp. 679-692.

Hernaman, V., and Munday, P.L. (2005) Life-history characteristics of coral reef gobies. I. Growth and life-span. Marine Ecology Progress Series, 290. pp. 207-221.

Hernaman, V., and Munday, P.L. (2005) Life-history characteristics of coral reef gobies. II. Mortality rate, mating system and timing of maturation. Marine Ecology Progress Series, 290. pp. 223-237.

Barber, Paul H., and Bellwood, David R. (2005) Biodiversity hotspots: evolutionary origins of biodiversity in wrasses (Halichoeres: Labridae) in the Indo-Pacific and new world tropics. Molecular Phylogenetics and Evolution, 35 (1). pp. 235-253.

Konow, Nicolai, and Bellwood, David R. (2005) Prey-capture in Pomacanthus semicirculatus (Teleostei, Pomacanthidae): functional implications of intramandibular joints in marine angelfishes. Journal of Experimental Biology, 208 (8). pp. 1421-1433.

Browne, J.G., and Kingsford, M.J. (2005) A commensal relationship between the scyphozoan medusae Catostylus mosaicus and the copepod Paramacrochiron maximum. Marine Biology, 146 (6). pp. 1157-1168.

Berumen, Michael L. (2005) The importance of juveniles in modelling growth: butterflyfish at Lizard Island. Environmental Biology of Fishes, 72 (4). pp. 409-413.

Green, Bridget S., and McCormick, Mark I. (2005) Maternal and paternal effects determine size, growth and performance in larvae of a tropical reef fish. Marine Ecology Progress Series, 289. pp. 263-272.

Jerry, D.R. (2005) Electrophoretic evidence for the presence of Tandanus tandanus (Pisces: Plotosidae) immediately north and south of the Hunter River, New South Wales. Linnean Society of New South Wales. Proceedings, 126. pp. 121-124.

Pandolfi, J.M., Jackson, J.B.C., Baron, N., Bradbury, R.H., Guzman, H.M., Hughes, T.P., Kappel, C.V., Micheli, F., Ogden, J.C., Possingham, H.P., and Sala, E. (2005) Are U.S. coral reefs on the slippery slope to slime? Science, 307 (5716). pp. 1725-1726.

Clouse, Ron, Janies, Daniel, and Kerr, Alexander M. (2005) Resurrection of Bohadschia bivittata from B. marmorata (Holothuroidea: Holothuriidae) based on behavioral, morphological, and mitochondrial DNA evidence. Zoology, 108 (1). pp. 27-39.

Taylor, Michael W., Schupp, Peter J., de Nys, Rocky, Kjelleberg, Staffan, and Steinberg, Peter D. (2005) Biogeography of bacteria associated with the marine sponge Cymbastela concentrica. Environmental Microbiology, 7 (3). pp. 419-433.

Green, Bridget S., and McCormick, Mark I. (2005) O2 replenishment to fish nests: males adjust brood care to ambient conditions and brood development. Behavioral Ecology, 16 (2). pp. 389-397.

Guest, J. R., Baird, A.H., Goh, B.P.L., and Chou, L.M. (2005) Reproductive seasonality in an equatorial assemblage of scleractinian corals. Coral Reefs, 24 (1). pp. 112-116.

Lou, Dong C., Mapstone, Bruce D., Russ, Garry R., Davies, Campbell R., and Begg, Gavin A. (2005) Using otolith weight-age relationships to predict age-based metrics of coral reef fish populations at different spatial scales. Fisheries Research, 71 (3). pp. 279-294.

Kritzer, Jacob P., and Davies, Campbell (2005) Demographic variation within spatially structured reef fish populations: when are larger-bodied subpopulations more important? Ecological Modelling, 182 (1). pp. 49-65.

Berumen, Michael L., Pratchett, Morgan S., and McCormick, Mark I. (2005) Within-reef differences in diet and body condition of coral-feeding butterflyfishes (Chaetodontidae). Marine Ecology Progress Series, 287. pp. 217-227.

Sale, Peter F., Cowen, Robert K., Danilowicz, Bret S., Jones, Geoffrey P., Kritzer, Jacob P., Lindeman, Kenyon C., Planes, Serge, Polunin, Nicholas V.C., Russ, Garry R., Sadovy, Yvonne J., and Steneck, Robert S. (2005) Critical science gaps impede use of no-take fishery reserves. Trends in Ecology & Evolution, 20 (2). pp. 74-80.

Annese, Danielle M., and Kingsford, Michael J. (2005) Distribution, movements and diet of nocturnal fishes on temperate reefs. Environmental Biology of Fishes, 72 (2). pp. 161-174.

Fisher, Rebecca (2005) Swimming speeds of larval coral reef fishes: impacts on self-recruitment and dispersal. Marine Ecology Progress Series, 285. pp. 223-232.

Saucedo, Pedro E., Bervera-Leon, Horacio, Monteforte, Mario, Southgate, Paul C., and Monsalvo-Spencer, Pablo (2005) Factors influencing recruitment of hatchery reared pearl oyster (Pinctada Mazatlanica; Hanley 1856) spat. Journal of Shellfish Research, 24 (1). pp. 215-219.

Alcala, Angel C., Russ, Garry R., Maypa, Aileen P., and Calumpong, Hilconida C. (2005) A long-term, spatially replicated experimental test of the effect of marine reserves on local fish yields. Canadian Journal of Fisheries and Aquatic Sciences, 62 (1). pp. 98-108.

Larson, Johan K., and McCormick, Mark I. (2005) The role of chemical alarm signals in facilitating learned recognition of novel chemical cues in a coral reef fish. Animal Behaviour, 69 (1). pp. 51-57.

Anthony, K.R.N., Hoogenboom, M. O., and Connolly, S.R. (2005) Adaptive variation in coral geometry and the optimization of internal colony light climates. Functional Ecology, 19 (1). pp. 17-26.

Hutson, Kate S., Ross, D. Jeff, Day, Rob. W., Ahern, John J., and UNSPECIFIED (2005) Australian scallops do not recognise the introduced predatory seastar Asterias amurensis. Marine Ecology Progress Series, 298. pp. 305-309.

Winkel, Kenneth D., Tibballs, James, Molenaar, Peter, Lambert, Gavin, Coles, Peter, Ross-Smith, Mark, Wiltshire, Carolyn, Fenner, Peter J., Gershwin, Lisa-Ann, Hawdon, Gabrielle M., Wright, Christine E., and Angus, James A. (2005) Cardiovascular actions of the venom from the Irukandji (Carukia barnesi) jellyfish: effects in human, rat and guinea-pig tissues in vitro and in pigs in vivo. Clinical and Experimental Pharmacology and Physiology, 32 (9). pp. 777-788.

Gershwin, Lisa-Ann (2005) Carybdea alata auct. and Manokia stiasnyi, reclassification to a new family with description of a new genus and two new species. Memoirs of the Queensland Museum, 51 (2). pp. 501-523.

Jones, Geoffrey P., Planes, Serge, and Thorrold, Simon R. (2005) Coral reef fish larvae settle close to home. Current Biology, 15 (14). pp. 1314-1318.

Birrell, Chico L., McCook, Laurence J., and Willis, Bette L. (2005) Effects of algal turfs and sediment on coral settlement. Marine Pollution Bulletin, 51 (1-4). pp. 408-414.

Rabbani, Abed Golam, and Zeng, Chaoshu (2005) Effects of tank colour on larval survival and development of mud crab Scylla serrata (Forskal). Aquaculture Research, 36 (11). pp. 1112-1119.

Madin, Joshua S. (2005) Mechanical limitations of reef corals during hydrodynamic disturbances. Coral Reefs, 24 (4). pp. 630-635.

Sheaves, Marcus (2005) Nature and consequences of biological connectivity in mangroves systems. Marine Ecology Progress Series, 302. pp. 293-305.

Kingsford, Michael J., and Hughes, Julian M. (2005) Patterns of growth, mortality, and size of the tropical damselfish Acanthochromis polyacanthus across the continental shelf of the Great Barrier Reef. Fishery Bulletin, 103 (4). pp. 561-573.

Messmer, Vanessa, van Herwerden, Lynne, Munday, Philip L., and Jones, Geoffrey P. (2005) Phylogeography of colour polymorphism in the coral reef fish Pseudochromis fuscus, from Papua New Guinea and the Great Barrier Reef. Coral Reefs, 24. pp. 392-402.

Gardner, L., Anderson, T., Place, A.R., Dixon, B., and Elizur, A. (2005) Sex change strategy and the aromatase genes. Journal of Steroid Biochemistry and Molecular Biology, 94 (5). pp. 395-404.

Gershwin, Lisa-Ann (2005) Spectacularia vanoppenae gen. et sp. Nov, a new hydromedusa (Cnidaria: Hydrozoa: Dipleurosomatidae) from the Great Barrier Reef. Memoirs of the Queensland Museum, 50 (2). pp. 201-205.

Harrington, Lindsay, Fabricius, Katharina, Eaglesham, Geoff, and Negri, Andrew (2005) Synergistic effects of diuron and sedimentation on photosynthesis and survival of crustose coralline algae. Marine Pollution Bulletin, 51 (1-4). pp. 415-427.

Gershwin, Lisa-Ann (2005) Two new species of jellyfishes (Cnidaria: Cubozoa: Carybdeida) from tropical Western Australia, presumed to cause Irukandji syndrome. Zootaxa, 1084. pp. 1-30.

Heupel, M.R., and Simpfendorfer, C.A. (2005) Using acoustic monitoring to evaluate MPAs for shark nursery areas: the importance of long-term data. Marine Technology Society Journal, 39 (1). pp. 10-18.

Fulton, Christopher J., and Bellwood, David R. (2005) Wave-induced water motion and the functional implications for coral reef fish assemblages. Limnology and Oceanography, 50 (1). pp. 255-264.

Fraser, M.R., Anderson, T.A., and de Nys, R. (2004) Ontogenic development of the spine and spinal deformities in larval barramundi (Lates calcarifer) culture. Aquaculture, 242 (1-4). pp. 697-711.

Smith, Shawn, and McCormick, Mark I. (2004) Efficacy of passive integrated transponder tags to determine spawning-site visitations by a tropical fish. Coral Reefs, 23 (4). pp. 570-577.

Harrington, Lindsay, Fabricius, Katharina, De'ath, Glenn, and Negri, Andrew (2004) Recognition and selection of settlement substrata determine post-settlement survival in corals. Ecology, 85 (12). pp. 3428-3437.

Fisher, Rebecca, and Wilson, Shaun K. (2004) Maximum sustainable swimming speeds of late-stage larvae of nine species of reef fishes. Journal of Experimental Marine Biology and Ecology, 312 (1). pp. 171-186.

Bastidas, C., Fabricius, K.E., and Willis, B.L. (2004) Demographic aspects of the soft coral Sinularia flexibilis leading to local dominance on coral reefs. Hydrobiologia, 530 (1-3). pp. 433-441.

Anthony, Kenneth R. N., and Connolly, Sean R. (2004) Environmental limits to growth: physiological niche boundaries of corals along turbidity - light gradients. Oecologia, 141 (3). pp. 373-384.

Anthony, Kenneth R.N., Ridd, Peter V., Orpin, Alan R., Larcombe, Piers, and Lough, Janice (2004) Temporal variation of light availability in coastal benthic habitats : effects of clouds, turbidity, and tides. Limnology and Oceanography, 49 (6). pp. 2201-2211.

Hobbs, Jean-Paul A., Munday, Philip L., and Jones, Geoffrey P. (2004) Social induction of maturation and sex determination in a coral reef fish. Proceedings of the Royal Society of London Series B: biological sciences, 271 (1553). pp. 2109-2114.

Dempster, Tim, and Kingsford, Michael J. (2004) Drifting objects as habitat for pelagic juvenile fish off New South Wales, Australia. Marine and Freshwater Research, 55 (7). pp. 675-687.

Bellwood, David R., van Herwerden, Lynne, and Konow, Nicolai (2004) Evolution and biogeography of marine angelfishes (Pisces: Pomacanthidae). Molecular Phylogenetics and Evolution, 33 (1). pp. 140-155.

Munday, Philip L. (2004) Habitat loss, resource specialization, and extinction on coral reefs. Global Change Biology, 10 (10). pp. 1642-1647.

Orpin, Alan R., Ridd, Peter V., Thomas, Séverine, Anthony, Kenneth R.N., Marshall, Paul, and Oliver, Jamie (2004) Natural turbidity variability and weather forecasts in risk management of anthropogenic sediment discharge near sensitive environments. Marine Pollution Bulletin, 49 (7). pp. 602-612.

Uthicke, S., Welch, D., and Benzie, J.A.H. (2004) Slow growth and lack of recovery in overfished holothurians on the Great Barrier Reef: evidence from DNA fingerprints and repeated large-scale surveys. Conservation Biology, 18 (5). pp. 1395-1404.

Davis, K.L.F., Russ, G.R., Williamson, D.H., and Evans, R.D. (2004) Surveillance and poaching on inshore reefs of the Great Barrier Reef Marine Park. Coastal Management, 32 (4). pp. 373-387.

Gagliano, Monica, and McCormick, Mark I. (2004) Feeding history influences otolith shape in tropical fish. Marine Ecology Progress Series, 278. pp. 291-296.

Hobbs, J.-P., and Munday, P.L. (2004) Intraspecific competition controls spatial distribution and social organisation of the coral-dwelling goby Gobiodon histrio. Marine Ecology Progress Series, 278. pp. 253-259.

Dempster, Tim, Sanchez-Jerez, Pablo, Bayle-Sempere, Just, and Kingsford, Michael (2004) Extensive aggregations of wild fish at coastal sea-cage fish farms. Hydrobiologia, 525 (1-3). pp. 245-248.

Depczynski, M., and Bellwood, D.R. (2004) Microhabitat utilisation patterns in cryptobenthis coral reef fish communities. Marine Biology, 145 (3). pp. 455-463.

Pratchett, M.S., Wilson, S.K., Berumen, M.L., and McCormick, M.I. (2004) Sublethal effects of coral bleaching on an obligate coral feeding butterflyfish. Coral Reefs, 23 (3). pp. 352-356.

Munday, Philip L., van Herwerden, Lynne, and Dudgeon, Christine L. (2004) Evidence for sympatric speciation by host shift in the sea. Current Biology, 14 (16). pp. 1498-1504.

Baird, Andrew H., and Morse, Aileen N.C. (2004) Induction of metamorphosis in larvae of the brooding corals Acropora palifera and Stylophora pistillata. Marine and Freshwater Research, 55 (5). pp. 469-472.

Sampey, A., Meekan, M.G., Carleton, J.H., McKinnon, A.D., and McCormick, M.I. (2004) Temporal patterns in distributions of tropical fish larvae on the North West Shelf of Australia. Marine and Freshwater Research, 55 (5). pp. 473-487.

Taylor, Joseph J., Southgate, Paul C., and Rose, Robert A. (2004) Effects of salinity on growth and survival of silver-lip pearl oyster, Pinctada maxima, spat. Journal of Shellfish Research, 23 (2). pp. 375-377.

Moland, Even, and Jones, Geoffrey P. (2004) Experimental confirmation of aggressive mimicry by a coral reef fish. Oecologia, 140 (4). pp. 676-683.

Scardino, Andrew, and de Nys, Rocky (2004) Fouling deterrence on the bivalve shell Mytilus galloprovincialis: a physical phenomenon? Biofouling, 20 (4). pp. 249-257.

McCormick, Mark I., and Hoey, Andrew S. (2004) Larval growth history determines juvenile growth and survival in a tropical marine fish. Oikos, 106 (2). pp. 225-242.

Pitt, Kylie A, Koop, Klaus, Rissik, David, and Kingsford, M.J. (2004) The ecology of scyphozoan jellyfish in Lake Illawarra. Wetlands (Australia), 21 (2). pp. 115-123.

Taylor, Michael W., Schupp, Peter J., Baillie, Harriet J., Charlton, Timothy S., de Nys, Rocky, Kjelleberg, Staffan, and Steinberg, Peter D. (2004) Evidence for Acyl Homoserine Lactone signal production in bacteria associated with marine sponges. Applied and Environmental Microbiology, 70 (7). pp. 4387-4389.

Klanten, Selma O., van Herwerden, Lynne, Choat, J.Howard, and Blair, David (2004) Patterns of lineage diversification in the Genus Naso (Acanthuridae). Molecular Phylogenetics and Evolution, 32 (1). pp. 221-235.

Bellwood, D.R., Hughes, T.P., Folke, C., and Nystrom, M. (2004) Confronting the coral reef crisis. Nature, 429 (6994). pp. 827-833.

Karlson, Ronald H., Cornell, Howard V., and Hughes, Terence P. (2004) Coral communities are regionally enriched along an oceanic biodiversity gradient. Nature, 429 (6994). pp. 867-870.

Genodepa, Jerome, Zeng, Chaoshu, and Southgate, Paul C. (2004) Preliminary assessment of a microbound diet as an Artemia replacement for mud crab, Scylla serrata, megalopa. Aquaculture, 236 (1-4). pp. 497-509.

Little, Angela F., van Oppen, Madeleine J.H., and Willis, Bette (2004) Flexibility in algal endosymbioses shapes growth in reef corals. Science, 304 (5676). pp. 1492-1494.

Nardi, K., Jones, G.P., Moran, M.J., and Cheng, Y.W. (2004) Contrasting effects of marine protected areas on the abundance of two exploited fishes at the sub-tropical Houtman Abrolhos Islands, Western Australia. Environmental Conservation, 31 (2). pp. 160-168.

Williamson, D.H., Russ, G.R., and Ayling, A.M. (2004) No-take marine reserves increase abundance and biomass of reef fish on inshore fringing reefs of the Great Barrier Reef. Environmental Conservation, 31 (2). pp. 149-159.

Patterson, Heather M., Kingsford, Michael J., and McCulloch, Malcolm T. (2004) The influence of oceanic and lagoonal plume waters on otolith chemistry. Canadian Journal of Fisheries and Aquatic Sciences, 61 (6). pp. 898-904.

Jones, Geoffrey P., McCormick, Mark I., Srinivasan, Maya, and Eagle, Janelle V. (2004) Coral decline threatens fish biodiversity in marine reserves. Proceedings of the National Academy of Sciences, 101 (21). pp. 8251-8253.

Wainwright, Peter, Bellwood, David R., Westneat, Mark W., Grubich, Justin R., and Hoey, Andrew S. (2004) A Functional morphospace for the skull of labrid fishes: patterns of diversity in a complex biomechanical system. Biological Journal of the Linnean Society, 82 (1). pp. 1-25.

Ackerman, John L., Bellwood, David R., and Brown, James H. (2004) The contribution of small individuals to density-body size relationships: examination of energetic equivalence in reef fishes. Oecologia, 139 (4). pp. 568-571.

Connell, Joseph H., Hughes, Terence P., Wallace, Carden C., Tanner, Jason E., Harms, Kyle E., and Kerr, Alexander M. (2004) A long-term study of competition and diversity of corals. Ecological Monographs, 74 (2). pp. 179-210.

Patterson, Heather M., Kingsford, Michael J., and McCulloch, Malcolm T. (2004) Elemental signatures of Pomacentrus coelestis otoliths at multiple spatial scales on the Great Barrier Reef, Australia. Marine Ecology Progress Series, 270. pp. 229-239.

Buston, Peter M, Munday, Philip L, and Warner, Robert R (2004) Evolutionary biology : sex change and relative body size in animals. Nature, 428 (6983). pp. 783-784.

Ayre, David J., and Hughes, Terence P. (2004) Climate change, genotypic diversity and gene flow in reef-building corals. Ecology Letters, 7 (4). pp. 273-278.

Bay, L.K., Choat, J.H., van Herwerden, L., and Robertson, D.R. (2004) High genetic diversities and complex genetic structure in an Indo-Pacific tropical reef fish (Chlorurus sordidus): evidence of an unstable evolutionary past? Marine Biology, 144 (4). pp. 757-767.

Gristina, Michele, and Gagliano, Monica (2004) Performance of traditional rush and modern plastic traps on the capture of Palinurus elephas (Fabricius, 1787) in laboratory tanks. Fisheries Research, 67 (2). pp. 235-239.

Syms, Craig, and Jones, Geoffrey P. (2004) Habitat structure, disturbance and the composition of sand-dwelling goby assemblages in a coral reef lagoon. Marine Ecology Progress Series, 268. pp. 221-230.

Munday, Philip L. (2004) Competitive coexistence of coral-dwelling fishes: the lottery hypothesis revisited. Ecology, 85 (3). pp. 623-628.

Russ, Garry R., and Alcala, Angel C. (2004) Marine reserves: long-term protection is required for full recovery of predatory fish populations. Oecologia, 138 (4). pp. 622-627.

Hoey, Andrew S., and McCormick, Mark I. (2004) Selective predation for low body condition at the larval-juvenile transition of a coral reef fish. Oecologia, 139 (1). pp. 23-29.

Munday, Philip L., Parker, Alyson L., Choat, J. Howard, and Gust, Nick (2004) Sex-specific growth effects in protogynous hermaphrodites. Canadian Journal of Fisheries and Aquatic Sciences, 61 (3). pp. 323-327.

Wolstenholme, Jackie (2004) Temporal reproductive isolation and gametic compatibility are evolutionary mechanisms in the Acropora humilis species group (Cnidaria; Scleractinia). Marine Biology, 144 (3). pp. 567-582.

Fulton, C.J., and Bellwood, D.R. (2004) Wave exposure, swimming performance, and the structure of tropical and temperate reef fish assemblages. Marine Biology, 144 (3). pp. 429-437.

Acosta-Salmon, Hector, Martinez-Fernandez, Erika, and Southgate, Paul C. (2004) A new approach to pearl oyster broodstock selection: can saibo donors be used as future broodstock? Aquaculture, 231 (1 - 4). pp. 205-214.

Beukers-Stewart, B.D., and Jones, G.P. (2004) The influence of prey abundance on the feeding ecology of two piscivorous species of coral reef fish. Journal of Experimental Marine Biology and Ecology, 299 (2). pp. 155-184.

Green, Bridget S., and Fisher, Rebecca (2004) Temperature influences swimming speed, growth and larval duration in coral reef fish larvae. Journal of Experimental Marine Biology and Ecology, 299 (1). pp. 115-132.

McClanahan, T.R., Baird, A.H., Marshall, P.A., and Toscano, M.A. (2004) Comparing bleaching and mortality responses of hard corals between southern Kenya and the Great Barrier Reef, Australia. Marine Pollution Bulletin, 48 (3). pp. 327-335.

Genodepa, Jerome, Southgate, Paul C., and Zeng, Chaoshu (2004) Diet particle size preference and optimal ration for mud crab, Scylla serrata, larvae fed microbound diets. Aquaculture, 230 (1-4). pp. 493-505.

Cruz-Motta, J.J., and Collins, J. (2004) Impacts of dredged material disposal on a tropical soft-bottom benthic assemblage. Marine Pollution Bulletin, 48 (3). pp. 270-280.

Schultz, Ortwin, and Bellwood, David R. (2004) Trigonodon oweni and Asima jugleri are different parts of the same species Trigonodon jugleri, a Chiseltooth Wrasse for the Lower and Middle Miocene in Central Europe (Osteichthyes, Labridae, Trigonodontinae). Annalen des Naturhistorischen Museums in Wien Serie A, 105. pp. 287-305.

Gust, Nick (2004) Variation in the population of protogynous coral reef fishes over tens of kilometres. Canadian Journal of Fisheries and Aquatic Sciences, 61 (2). pp. 205-218.

Walker, Stefan P.W., and McCormick, Mark I. (2004) Otolith-check formation and accelerated growth associated with sex change in an annual protogynous tropical fish. Marine Ecology Progress Series, 266. pp. 201-212.

Nilsson, Goran E., Hobbs, Jean-Paul, Munday, Philip L., and Ostlund-Nilsson, Sara (2004) Coward or braveheart: extreme habitat fidelity through hypoxia tolerance in a coral-dwelling goby. Journal of Experimental Biology, 207 (1). pp. 33-39.

Eagle, Janelle V., and Jones, Geoffrey P. (2004) Mimicry in coral reef fishes: ecological and behavioural responses of a mimic to its model. Journal of Zoology, 264 (1). pp. 33-43.

Mackenzie, J.B., Munday, P.L., Willis, B.L., Miller, D.J., and van Oppen, M.J.H. (2004) Unexpected patterns of genetic structuring among locations but not colour morphs in Acropora nasuta (Cnidaria; Scleractinia). Molecular Ecology, 13 (1). pp. 9-20.

Wilson, Shaun K. (2004) Growth, mortality and turnover rates of a small detritivorous fish. Marine Ecology Progress Series, 284. pp. 253-259.

Zeng, Chaoshu, Li, Shaojing, and Zeng, Hui (2004) Occurrence of additional Zoea-VI larvae in the mud crab, Scylla paramamosain (Estampador), reared in the laboratory. Hydrobiologia, 529 (1-3). pp. 49-58.

Jerry, D. R., Preston, N., Crocos, P. J., Keys, S., Meadows, J. R. S., and Li, Y. (2004) Parentage determination of Kuruma prawn shrimp Penaeus (Marsupenaeus) japonicus using microsatellite markers. Aquaculture, 235 (1-4). pp. 237-247.

Nguyen, T. T. T., Austin, C. M., Meewan, M. M., Schultz, M. B., and Jerry, D. R. (2004) Phylogeography of the freshwater crayfish Cherax destructor Clark (Parastacidae) in inland Australia: historical fragmentation and recent range expansion. Biological Journal of the Linnean Society, 83 (4). pp. 539-550.

Houston, Wayne, Porter, Gary, Elder, Rod, Black, Robert, and Sheaves, Marcus (2004) Rediscovery of yellow chats (Capricorn Subspecies) on the Fitzroy River Delta Central Queensland. Sunbird, 34 (1). pp. 36-42.

Kritzer, Jacob P. (2004) Sex-specific growth and mortality, spawning season, and female maturation of the Stripey bass (Lutjanus carponotatus) on the Great Barrier Reef. Fishery Bulletin, 102 (1). pp. 94-107.

Claydon, John (2004) Spawning aggregations of coral reef fishes: characteristics, hypotheses, threats and management. Oceanography and Marine Biology: an annual review, 42. pp. 265-301.

Zeidler, Wolfgang, and Gershwin, Lisa-Ann (2004) A new species of Australomedusa (Cnidaria: Hydrozoa: Anthomedusae) from a saline lake in south-western Western Australia. Records of the Western Australian Museum, 22 (2). pp. 109-113.

Elliott, J.P., and Bellwood, D.R. (2003) Alimentary tract morphology and diet in three coral reef fish families. Journal of Fish Biology, 63 (6). pp. 1598-1609.

Munday, Philip L., Eyre, Peter J., and Jones, Geoffrey P. (2003) Ecological mechanisms for coexistence of colour polymorphism in a coral-reef fish: an experimental evaluation. Oecologia, 137 (4). pp. 519-526.

Russ, Garry R., and Alcala, Angel C. (2003) Marine reserves: rates and patterns of recovery and decline of predatory fish, 1983-2000. Ecological Applications, 13 (6). pp. 1553-1565.

Pit, Josiah H., and Southgate, Paul C. (2003) Should slow growing pearl oyster (Pinctada margaritifera) spat (Runts) be discarded? Journal of Shellfish Research, 22 (3). pp. 773-775.

Dartnall, Alan J., Byrne, Maria, Collins, John, and Hart, Michael W. (2003) A new viviparous species of asterinid (Echinodermata, Asteroidea, Asterinidae) and a new genus to accommodate the species of pantropical exiguoid sea stars. Zootaxa, 359. pp. 1-14.

Caley, M. Julian, and Munday, Philip L. (2003) Growth trades off with habitat specialization. Proceedings of the Royal Society of London Series B, Biological Sciences, 270 (52). pp. 175-177.

Klanten, Selma O., Van Herwerden, Lynne, and Choat, J. Howard (2003) Acquiring reef fish DNA sequences from formalin-fixed museum specimens. Bulletin of Marine Science, 73 (3). pp. 771-776.

Pit, Josiah H., and Southgate, Paul C. (2003) Fouling and predation; how do they affect growth and survival of the blacklip pearl oyster, Pinctada margaritifera, during nursery culture? Aquaculture International, 11 (6). pp. 545-555.

Connolly, Sean R., and Muko, Soyoka (2003) Space preemption, size-dependent competition, and the coexistence of clonal growth forms. Ecology, 84 (11). pp. 2979-2988.

Kavanagh, Kathryn D., and Alford, Ross A. (2003) Sensory and skeletal development and growth in relation to the duration of the embryonic and larval stages in damselfishes (Pomacentridae). Biological Journal of the Linnean Society, 80 (2). pp. 187-206.

Pitt, Kylie. A, and Kingsford, Michael J. (2003) Temporal variation in the virgin biomass of the edible jellyfish, Catostylus mosaicus (Scyphozoa, Rhizostomeae). Fisheries Research, 63 (3). pp. 303-313.

Dempster, Tim, and Kingsford, Michael J. (2003) Homing of pelagic fish to fish aggregation devices (FADs): the role of sensory cues. Marine Ecology Progress Series, 258. pp. 213-222.

Hughes, T.P., Baird, A.H., Bellwood, D.R., Card, M., Connolly, S.R., Folke, C., Grosberg, R., Hoegh-Guldberg, O., Jackson, J.B.C., Kleypas, J., Lough, J.M., Marshall, P.A., Nyström, M., Palumbi, S.R., Pandolfi, J.M., Rosen, B., and Roughgarden, J. (2003) Climate change, human impacts, and the resilience of coral reefs. Science, 301 (5635). pp. 929-933.

Pandolfi, John M., Bradbury, Roger H., Sala, Enric, Hughes, Terry, Bjorndal, Karen A., Cooke, Richard G., McArdle, Deborah, McClenachan, Loren, Newman, Marah J.H., Paredes, Gustavo, Warner, Robert R., and Jackson, Jeremy B.C. (2003) Global trajectories of the long-term decline of coral reef ecosystems. Science, 301 (5635). pp. 955-958.

Connolly, Sean R., Bellwood, David R., and Hughes, Terence P. (2003) Indo-Pacific biodiversity of coral Rreefs: deviations from a mid-domain model. Ecology, 84 (8). pp. 2178-2190.

Leuzinger, Sebastian, Anthony, Kenneth, and Willis, Bette L. (2003) Reproductive energy investment in corals: scaling with module size. Oecologia, 136 (4). pp. 524-531.

Gillanders, B.M., and Kingsford, M.J. (2003) Spatial variation in elemental composition of otoliths of three species of fish (family Sparidae). Estuarine, Coastal and Shelf Science, 57 (5-6). pp. 1049-1064.

Schubert, Melissa, Munday, Philip L., Caley, M. Julian, Jones, Geoffrey P., and Llewellyn, Lyndon E. (2003) The toxicity of skin secretions from coral-dwelling gobies and their potential role as a predator deterrent. Environmental Biology of Fishes, 67 (2). pp. 359-367.

Wilson, Shaun K., Bellwood, David R., Choat, J. Howard, and Furnas, Miles J. (2003) Detritus in the epilithic algal matrix and its use by coral reef fishes. Oceanography and Marine Biology: an annual review, 41. pp. 279-309.

Wolstenholme, J.K., Wallace, C.C., and Chen, C.A. (2003) Species boundaries within the Acropora humilis species group (Cnidaria; Scleractinia): a morphological and molecular interpretation of evolution. Coral Reefs, 22 (2). pp. 155-166.

Zeller, D., Stoute, S.L., and Russ, G.R. (2003) Movements of reef fishes across marine reserve boundaries: effects of manipulating a density gradient. Marine Ecology Progress Series, 254. pp. 269-280.

McKinnon, A.D., Duggan, S., Nichols, P.D., Rimmer, M.A., Semmens, G., and Robino, B. (2003) The potential of tropical paracalanid copepods as live feeds in aquaculture. Aquaculture, 223 (1-4). pp. 89-106.

McCormick, Mark I. (2003) Consumption of coral propagules after mass spawning enhances larval quality of a damselfish through maternal effects. Oecologia, 136 (1). pp. 37-45.

Ackerman, John L., and Bellwood, David R. (2003) The contribution of small individuals to density-body size relationships. Oecologia, 136 (1). pp. 137-140.

Graham, N.A.J., Evans, R.D., and Russ, G.R. (2003) The effects of marine reserve protection on the trophic relationships of reef fishes on the Great Barrier Reef. Environmental Conservation, 30 (2). pp. 200-208.

Beger, Maria, Jones, Geoffrey P., and Munday, Philip L. (2003) Conservation of coral reef biodiversity: a comparison of reserve selection procedures for corals and fishes. Biological Conservation, 111 (1). pp. 53-62.

van Herwerden, L., Benzie, J., and Davies, Campbell (2003) Microsatellite variation and population genetic structure of the red throat emperor on the Great Barrier Reef. Journal of Fish Biology, 62 (5). pp. 987-999.

Baird, A.H., Babcock, R.C., and Mundy, C.P. (2003) Habitat selection by larvae influences the depth distribution of six common coral species. Marine Ecology Progress Series, 252. pp. 289-293.

van Herwerden, Lynne, Caley, M. Julian, and Blair, David (2003) Regulatory motifs are present in the ITS1 of some flatworm species. Journal of Experimental Zoology Part B: molecular and developmental evolution, 296 (1). pp. 80-86.

Russ, G.R. (2003) Grazer biomass correlates more strongly with production than with biomass of algal turfs on a coral reef. Coral Reefs, 22 (1). pp. 63-67.

Bellwood, David R., Hoey, Andrew S., and Choat, J. Howard (2003) Limited functional redundancy in high diversity systems: resilience and ecosystem function on coral reefs. Ecology Letters, 6 (4). pp. 281-285.

Munday, P.L., Schubert, M., Baggio, J.A., Jones, G.P., Caley, M.J., and Grutter, A.S. (2003) Skin toxins and external parasitism of coral-dwelling gobies. Journal of Fish Biology, 62 (4). pp. 976-981.

Anthony, K.R.N., and Hoegh-Guldberg, O. (2003) Variation in coral photosynthesis, respiration and growth characteristics in contrasting light microhabitats: an analogue to plants in forest gaps and understoreys? Functional Ecology, 17 (2). pp. 246-259.

Bellwood, David R. (2003) Origins and escalation of herbivory in fishes: a functional perspective. Paleobiology, 29 (1). pp. 71-83.

Clements, Kendall D., Gray, Russell D., and Choat, J.Howard (2003) Rapid evolutionary divergences in reef fishes of the family Acanthuridae (Perciformes: Teleostei). Molecular Phylogenetics and Evolution, 26 (2). pp. 190-201.

Doroudi, M.S., Southgate, P.C., and Lucas, J.S. (2003) Variation in clearance and ingestion rates by larvae of the black-lip pearl oyster (Pinctada margaritifera, L.) feeding on various microalgae. Aquaculture Nutrition, 9 (1). pp. 11-16.

Anthony, Kenneth R.N., and Hoegh-Guldberg, Ove (2003) Kinetics of photoacclimation in corals. Oecologia, 134 (1). pp. 23-31.

Kroon, F.J., Munday, P.L., and Pankhurst, N.W. (2003) Steroid hormone levels and bi-directional sex change in Gobiodon histrio. Journal of Fish Biology, 62 (1). pp. 153-167.

Strugnell, Jan M., and Southgate, Paul C. (2003) Changes in tissue composition during larval development of the blacklip pearl oyster, Pinctada margaritifera (L.). Molluscan Research, 23 (2). pp. 179-183.

Jompa, Jamaluddin, and McCook, Laurence J. (2003) Contrasting effects of turf algae on corals: massive Porites spp. are unaffected by mixed-species turfs, but killed by the red alga Anotrichium tenue. Marine Ecology Progress Series, 258. pp. 79-86.

Jompa, Jamaluddin, and McCook, Laurence J. (2003) Coral-algal competition: macroalgae with different properties have different effects on corals. Marine Ecology Progress Series, 258. pp. 87-95.

Rogers, Cary N., de Nys, Rocky, and Steinberg, Peter D. (2003) Ecology of the sea hare Aplysia parvula (Opisthobranchia) in New South Wales, Australia. Molluscan Research, 23 (3). pp. 185-198.

Raso, Sayam, and Anderson, Trevor A. (2003) Effects of dietary fish oil replacement on growth and carcass proximate composition of juvenile barramundi. Aquaculture Research, 34 (10). pp. 813-819.

Saveh Doroudi, Mehdi S., and Southgate, Paul C. (2003) Embryonic and larval development of Pinctada margaritifera (Linnaeus, 1758). Molluscan Research, 23 (2). pp. 101-107.

Gershwin, Lisa-Anne, and Zeidler, Wolfgang (2003) Encounter 2002 expedition to the isles of St Francis, South Australia: Medusae, siphonophores and ctenophores. Transactions of the Royal Society of South Australia, 127. pp. 205-241.

Babcock, Russ C., Baird, Andrew H., Piromvaragorn, Srisakul, Thomson, Damian P., and Willis, Bette L. (2003) Identification of scleractinian coral recruits from Indo-Pacific reefs. Zoological Studies, 42 (1). pp. 211-226.

Scardino, Andrew, de Nys, Rocky, Ison, Odette, O'Connor, Wayne, and Steinberg, Peter (2003) Microtopography and antifouling properties of the shell surface of the bivalve molluscs Mytilus galloprovincialis and Pinctada imbricata. Biofouling, 19 (Supp 1). pp. 221-230.

Adams, S. (2003) Morphological ontogeny of the gonad of three plectropomid species through sex differentiation and transition. Journal of Fish Biology, 63 (1). pp. 22-36.

Arango, C.P., and Brodie, G.D. (2003) Observations of predation on the tropical Nudibranch Okenia sp. by sea spider Anoplodactylus longiceps Williams (Arthropoda: Pycnogonida). The Veliger, 46 (1). pp. 99-101.

Steer, Mike A., and Semmens, Jayson M. (2003) Pulling or drilling, does size or species matter? an experimental study of prey handling in Octopus dierythaeus (Norman, 1992). Journal of Experimental Marine Biology & Ecology, 290 (2). pp. 165-178.

Williams, Ashley J., Davies, Campbell R., Mapstone, Bruce D., and Russ, Garry R. (2003) Scales of spatial variation in demography of a large coral reef fish: an exception to the typical model? Fishery Bulletin, 101 (3). pp. 673-683.

Fisher, R. (2003) Spatial and temporal variations in nematode assemblages in tropical seagrass sediments. Hydrobiologia, 493 (1). pp. 43-63.

Lecchini, David, Adjeroud, Mehdi, Pratchett, Morgan S., Cadoret, Laurence, and Galzin, René (2003) Spatial structure of coral reef fish communities in the Ryukyu Islands, southern Japan. Oceanologica Acta, 26. pp. 537-547.

Russ, Garry R., Alcala, Angel C., and Maypa, Aileen P. (2003) Spillover from marine reserves: the case of Naso vlamingii at Apo Island, the Philippines. Marine Ecology Progress Series, 264. pp. 15-20.

Pitt, Kylie A., and Kingsford, Michael J. (2003) Temporal and spatial variation in recruitment and growth of medusae of the jellyfish, Catostylus mosaicus (Scyphozoa : Rhizostomeae). Marine and Freshwater Research, 54 (2). pp. 117-125.

Fisher, Rebecca, and Bellwood, David R. (2003) Undisturbed swimming behaviour and nocturnal activity of coral reef fish larvae. Marine Ecology Progress Series, 263. pp. 177-188.

Choat, J.H., Robertson, D.R., Ackerman, J.L., and Posada, J.M. (2003) An age-based demographic analysis of the Caribbean stoplight parrotfish Sparisoma viride. Marine Ecology Progress Series, 246. pp. 265-277.

Depczynski, Martial, and Bellwood, David R. (2003) The role of cryptobenthic reef fishes in coral reef trophodynamics. Marine Ecology Progress Series, 256. pp. 183-191.

Austin, C.M., Nguyen, T.T.T., Meewan, M. M., and Jerry, D.R. (2003) The taxonomy and phylogeny of the 'Cherax destructor' complex (Decapoda: Parastacidae) examined using mitochondrial 16S sequences. Australian Journal of Zoology, 51 (2). pp. 99-110.

Ferry-Graham, L.A., Wainwright, P.C., Westneat, M.W., and Bellwood, D.R. (2002) Mechanisms of benthic prey capture in wrasses (Labridae). Marine Biology, 141 (5). pp. 819-830.

McCormick, Mark I., and Nechaev, Igor V. (2002) Influence of cortisol on development rhythms during embryogenesis in a tropical damselfish. Journal of Experimental Zoology, 293 (5). pp. 456-466.

Bellwood, D.R., Wainwright, P.C. , Fulton, C.J., and Hoey, A. (2002) Assembly rules and functional groups at global biogeographical scales. Functional Ecology, 16 (5). pp. 557-562.

Steinberg, Peter D., de Nys, Rocky, and Kjelleberg, Staffan (2002) Chemical cues for surface colonization. Journal of Chemical Ecology, 28 (10). pp. 1935-1951.

Bastidas, C., Benzie, J.A.H., and Fabricius, K.E. (2002) Genetic differentiation among populations of the brooding soft coral Clavularia koellikeri on the Great Barrier Reef. Coral Reefs, 21 (3). pp. 233-241.

van Oppen, Madeleine J.H., Willis, Bette L., van Rheede, Teun, and Miller, David J. (2002) Spawning times, reproductive compatibilities and genetic structuring in the Acropora aspera group: evidence for natural hybridization and semi-permeable species boundaries in corals. Molecular Ecology, 11 (8). pp. 1363-1376.

Baird, A.H., and Marshall, P.A. (2002) Mortality, growth and reproduction in scleractinian corals following bleaching on the Great Barrier Reef. Marine Ecology Progress Series, 237. pp. 133-141.

Doroudi, Mehdi S., Southgate, Paul C., and Mayer, Robert J. (2002) Evaluation of partial substitution of live algae with dried Tetraselmis for larval rearing of black-lip pearl oyster, Pinctada margaritifera (L.). Aquaculture International, 10 (4). pp. 265-277.

Wilson, Shaun (2002) Nutritional value of detritus and algae in blenny territories on the Great Barrier Reef. Journal of Experimental Marine Biology and Ecology, 271 (24). pp. 155-169.

Bean, Kyi, Jones, Geoffrey P., and Caley, M. Julian (2002) Relationships among distribution, abundance and microhabitat specialisation in a guild of coral reef triggerfish (family Balistidae). Marine Ecology - Progress Series, 233. pp. 263-272.

Baird, Andrew H,, Bellwood, David R., Connell, Joseph H., Cornell, Howard V., Hughes, Terry P., Karlson, Ronald H., and Rosen, Brian R. (2002) Coral reef biodiversity and conservation. Science, 296 (5570). pp. 1026-1028.

Chen, Chaolum Allen, Wallace, Carden C., and Wolstenholme, Jackie (2002) Analysis of the mitochondrial 12S rRNA gene supports a two-clade hypothesis of the evolutionary history of scleractinian corals. Molecular Phylogenetics and Evolution, 23 (2). pp. 137-149.

Jompa, Jamaluddin, and McCook, Laurence J. (2002) Effects of competition and herbivory on interactions between a hard coral and a brown alga. Journal of Experimental Marine Biology and Ecology, 271 (1). pp. 25-39.

Streelman, J.T., Alfaro, M., Westneat, M.W., Bellwood, D.R., and Karl, S.A. (2002) Evolutionary history of the parrotfishes: biogeography, ecomorphology, and comparative diversity. Evolution, 56 (5). pp. 961-971.

Marnane, Michael J., and Bellwood, David R. (2002) Diet and nocturnal foraging in cardinalfishes (Apogonidae) at One Tree Reef, Great Barrier Reef, Australia. Marine Ecology Progress Series, 231. pp. 261-268.

Ackerman, J.L., and Bellwood, D.R. (2002) Comparative efficiency of clove oil and rotenone for sampling tropical reef fish assemblages. Journal of Fish Biology, 60 (4). pp. 893-901.

Sanchez-Jerez, P., Gillanders, B., and Kingsford, M.J. (2002) Spacial variation in abundance of prey and diet of trumpeter (Pelates sexlineatus: Teraponidae) associated with Zostera capricorni seagrass meadows. Austral Ecology, 27 (2). pp. 200-210.

Fisher, R., and Bellwood, D.R. (2002) The influence of swimming speed on sustained swimming performance of late-stage reef fish larvae. Marine Biology, 140 (4). pp. 801-807.

Fisher, R., and Bellwood, D.R. (2002) A light trap design for stratum-specific sampling of reef fish larvae. Journal of Experimental Marine Biology and Ecology, 269 (1). pp. 27-37.

Connolly, Sean R., and Miller, Arnold I. (2002) Global Ordovician faunal transitions in the marine benthos: ultimate causes. Paleobiology, 28 (1). pp. 26-40.

Hughes, T.P., Baird, A.H., Dinsdale, E.A., Harriott, V.J., Moltschaniwskyj, N.A., Pratchett, M.S., Tanner, J.E., and Willis, B.L. (2002) Detecting regional variation using meta-analysis and large-scale sampling: latitudinal patterns in recruitment. Ecology, 83 (2). pp. 436-451.

Platten, J. R., Tibbetts, I. R., and Sheaves, M. J. (2002) The influence of increased line-fishing mortality on the sex ratio and age of sex reversal of the venus tusk fish. Journal of Fish Biology, 60 (2). pp. 301-318.

Swearer, Stephen E., Shima, Jeffrey S., Hellberg, Michael E., Thorrold, Simon R., Jones, Geoffrey P., Robertson, D. Ross, Morgan, Steven G., Selkoe, Kimberly A., Ruiz, Gregory M., and Warner, Robert R. (2002) Evidence of self-recruitment in demersal marine populations. Bulletin of Marine Science, 70 (Supple). pp. 251-271.

Strathmann, Richard R., Hughes, Terence P., Kuris, Armand M., Lindeman, Kenyon C., Morgan, Steven G., Pandolfi, John M., and Warner, Robert R. (2002) Evolution of local recruitment and its consequences for marine populations. Bulletin of Marine Science, 70 (Supple). pp. 377-396.

Sponaugle, Su, Cowen, Robert K., Shanks, Alan, Morgan, Steven G., Leis, Jeffrey M., Pineda, Jesus, Boehlert, George W., Kingsford, Michael J., Lindeman, Kenyon C., Grimes, Churchill, and Munro, John L. (2002) Predicting self-recruitment in marine populations: biophysical correlates and mechanisms. Bulletin of Marine Science, 70 (1). pp. 341-375.

Thorrold, Simon R., Jones, Geoffrey, Hellberg, Michael E., Burton, Ronald S., Swearer, Stephen E., Neigel, Jospeh E., Morgan, Steven G., and Warner, Robert R. (2002) Quantifying larval retention and connectivity in marine populations with artificial and natural markers. Bulletin of Marine Science, 70 (Supple). pp. 291-308.

Kingsford, Michael J., Leis, Jeffrey M., Shanks, Alan, Lindeman, Kenyon C., Morgan, Steven G., and Pineda, Jesús (2002) Sensory environments, larval abilities and local self-recruitment. Bulletin of Marine Science, 70 (Supple). pp. 309-340.

Munday, Philip L. (2002) Bi-directional sex change: testing the growth-rate advantage model. Behavioural Ecology and Sociobiology, 52 (3). pp. 247-254.

Hughes, Terry P., Bellwood, David R., and Connolly, Sean R. (2002) Biodiversity hotspots, centres of endemicity, and the conservation of coral reefs. Ecology Letters, 5 (6). pp. 775-784.

Steinberg, Peter D., and de Nys, Rocky (2002) Chemical mediation of colonization of seaweed surfaces. Journal of Phycology, 38 (4). pp. 621-629.

Anthony, Kenneth R.N., Connolly, Sean R., and Willis, Bette L. (2002) Comparative analysis of energy allocation to tissue and skeletal growth in corals. Limnology and Oceanography, 47 (5). pp. 1417-1429.

McCormick, M.I., Makey, L., and Dufour, V. (2002) Comparative study of metamorphosis in tropical reef fishes. Marine Biology, 141 (5). pp. 841-853.

Gust, N., Choat, J., and Ackerman, J. (2002) Demographic plasticity in tropical reef fishes. Marine Biology, 140 (5). pp. 1039-1051.

Wainwright, Peter C., Bellwood, David R., and Westneat, Mark W. (2002) Ecomorphology of locomotion in labrid fishes. Environmental Biology of Fishes, 65 (1). pp. 47-62.

Si, Aung, Bellwood, O., and Alexander, C.G. (2002) Evidence for filter-feeding by the wood-boring isopod, Sphaeroma terebrans (Crustacea: Peracarida). Journal of Zoology, 256 (4). pp. 463-471.

Wilson, David T., and Meekan, Mark G. (2002) Growth-related advantages for survival to the point of replenishment in the coral reef fish Stegastes partitus (Pomacentridae). Marine Ecology-Progress Series, 231. pp. 247-260.

Munday, Philip L., Pierce, Sarah J., Jones, Geoffrey P., and Larson, Helen K. (2002) Habitat use, social organization and reproductive biology of the seawhip goby, Bryaninops yongei. Marine and Freshwater Research, 53 (4). pp. 769-775.

Gillanders, Bronwyn M., and Kingsford, Michael J. (2002) Impact of changes in flow of freshwater on estuarine and open coastal habitats and the associated organisms. Oceanography and Marine Biology: an annual review, 40. pp. 233-309.

Bergenius, Mikaela A.J., Meekan, Mark G., Robertson, D. Ross, and Mccormick, Mark I. (2002) Larval growth predicts the recruitment success of a coral reef fish. Oecologia, 131 (4). pp. 521-525.

Atema, Jelle, Kingsford, Michael J., and Gerlach, Gabriele (2002) Larval reef fish could use odour for detection, retention and orientation to reefs. Marine Ecology Progress Series, 241. pp. 151-160.

Round, Frank E., and Alexander, Christopher G. (2002) Licmosoma: a new diatom genus growing on barnacle cirri. Diatom Research, 17 (2). pp. 319-326.

de Nys, Rocky, and Steinberg, Peter D. (2002) Linking marine biology and biotechnology. Current Opinion in Biotechnology, 13 (3). pp. 244-248.

Maypa, A.P., Russ, G.R., Alcala, A.C., and Calumpong, H.P. (2002) Long-term trends in yield and catch rates of the coral reef fishery at Apo Island, central Philippines. Marine and Freshwater Research, 53 (2). pp. 207-213.

Fulton, Christopher J., and Bellwood, David R. (2002) Ontogenetic habitat use in labrid fishes: an ecomorphological perspective. Marine Ecology Progress Series, 236. pp. 255-262.

Molony, Brett W., and Sheaves, Marcus J. (2002) Otolith increment widths as tools to record and assess environmental changes in estuarine areas. Marine Technology Society Journal, 36 (1). pp. 44-51.

Fulton, Christopher J., and Bellwood, David R. (2002) Patterns of foraging in labrid fishes. Marine Ecology-Progress Series, 226. pp. 135-142.

Van Herwerden, L., Davies, C.R., and Choat, J.H. (2002) Phylogenetic and evolutionary perspectives of the Indo-Pacific grouper Plectropomus species on the Great Barrier Reef, Australia. Journal of Fish Biology, 60 (6). pp. 1591-1596.

Chen, Li-Shu (2002) Post-settlement diet shift of Chlorurus sordidus and Scarus schlegeli (Pisces: Scaridae). Zoological Studies, 41 (1). pp. 47-58.

Curley, Belinda G., Kingsford, Michael J., and Gillanders, Bronwyn M. (2002) Spatial and habitat-related patterns of temperate reef fish assemblages: implications for the design of Marine Protected Areas. Marine and Freshwater Research, 53 (8). pp. 1197-1210.

Alcala, A.C., and Russ, G.R. (2002) Status of Philippine coral reef fisheries. Asian Fisheries Science, 15 (2). pp. 177-192.

Marquez, L.M., van Oppen, M.J.H., Willis, B.L., and Miller, D.J. (2002) Sympatric populations of the highly cross-fertile coral species Acropora hyacinthus and Acropora cytherea are genetically distinct. Proceedings of the Royal Society of London Series B, Biological Sciences, 269 (1497). pp. 1289-1294.

Kritzer, Jacob P. (2002) Variation in the population biology of stripey bass Lutjanus carponotatus within and between two island groups on the Great Barrier Reef. Marine Ecology Progress Series, 243. pp. 191-207.

Green, B.S., Reilly, S.M., and McCormick, M.I. (2002) A cost-effective method of preparing larval fish otoliths for reading using enzyme digestion and staining. Journal of Fish Biology, 61 (6). pp. 1600-1605.

Doroudi, Mehdi S., and Southgate, Paul C. (2002) The effect of chemical cues on settlement behaviour of blacklip pearl oyster (Pinctada margaritifera) larvae. Aquaculture, 209 (1-4). pp. 117-124.

Jompa, Jamaluddin, and McCook, Laurence J. (2002) The effects of nutrients and herbivory on competition between a hard coral (Porites cylindrica) and a brown alga (Lobophora variegata). Limnology and Oceanography, 47 (2). pp. 527-534.

Munday, P.L., and Molony, B.W. (2002) The energetic cost of protogynous versus protandrous sex change in the bi-directional sex-changing fish Gobiodon histrio. Marine Biology, 141 (6). pp. 1011-1017.

Marquez, L.M., van Oppen, M.J.H., Willis, B.L., Reyes, A., and Miller, D.J. (2002) The highly cross-fertile coral species, Acropora hyacinthus and Acropora cytherea, constitute statistically distinguishable lineages. Molecular Ecology, 11 (8). pp. 1339-1349.

Cimino, Elizabeth J., Owens, Leigh, Bromage, Erin, and Anderson, Trevor A. (2002) A newly developed ELISA showing the effect of environmental stress on levels of hsp86 in Cherax quadricarinatus and Penaeus monodon. Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology, 132 (3). pp. 591-598.

Bellwood, Orpha (2002) The occurrence, mechanics and significance of burying behaviour in crabs (Crustacea: Brachyura). Journal of Natural History, 36 (10). pp. 1223-1238.

Choat, J.H., Clements, K.D., and Robbins, W.D. (2002) The trophic status of herbivorous fishes on coral reefs. Marine Biology, 140 (3). pp. 613-623.

Sheaves, Marcus (2001) Are there really few piscivorous fishes in shallow estuarine habitats? Marine Ecology-Progress Series, 222. pp. 279-290.

Wilson, Shaun K., Burns, Kathryn, and Codi, Susan (2001) Sources of dietary lipids in the coral reef blenny Salarias patzneri. Marine Ecology-Progress Series, 222. pp. 291-296.

Bay, L.K., Jones, G.P., and McCormick, M.I. (2001) Habitat selection and aggression as determinants of spatial segregation among damselfish on a coral reef. Coral Reefs, 20 (3). pp. 289-298.

Brodie, Gilianne D., Klussmann-Kolb, Annette, and Gosliner, Terrence M. (2001) Anatomy and histology of a new species of Enotepteron (Cephalaspidea: Gastropteridae) from tropical northeastern Australia. The Veliger, 44 (4). pp. 362-369.

Wilson, Shaun, Burns, Kathryn, and Codi, Susan (2001) Identifying sources of organic matter in sediments from a detritivorous coral reef fish territory. Organic Geochemistry, 32 (10). pp. 1257-1269.

Wilson, J.P., and Sheaves, M. (2001) Short-term temporal variations in taxonomic composition and trophic structure of a tropical estuarine fish assemblage. Marine Biology, 139 (4). pp. 787-796.

Pratchett, M.S., Gust, N., Goby, G., and Klanten, S.O. (2001) Consumption of coral propagules represents a significant trophic link between corals and reef fish. Coral Reefs, 20 (1). pp. 13-17.

Jackson, Jeremy B. C., Kirby, Michael X., Berger, Wolfgang H., Bjorndal, Karen A., Botsford, Louis W., Bourque, Bruce J., Bradbury, Roger H., Cooke, Richard, Erlandson, Jon, Estes, James A., Hughes, Terence P., Kidwell, Susan, Lange, Carina B., Lenihan, Hunter S., Pandolfi, John M., Peterson, Charles H., Steneck, Robert S., Tegner, Mia J., and Warner, Robert R. (2001) Historical overfishing and the recent collapse of coastal ecosystems. Science, 293 (5530). pp. 629-637.

Ferry-Graham, Lara A., Wainwright, Peter C., Westneat, Mark W., and Bellwood, David R. (2001) Modulation of prey capture kinematics in the cheeklined wrasse Oxycheilinus digrammus (Teleostei: Labridae). Journal of Experimental Zoology, 290 (2). pp. 88-100.

van Oppen, Madeleine J.H., McDonald, Brenda J., Willis, Bette, and Miller, David J. (2001) The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence? Molecular Biology and Evolution, 18 (7). pp. 1315-1329.

Adams, S., and Williams, A.J. (2001) A preliminary test of the transitional growth spurt hypothesis using the protogynous coral trout Plectropomus maculatus. Journal of Fish Biology, 59 (1). pp. 183-185.

Caley, M. Julian, Schwarzkopf, Lin, and Shine, Richard (2001) Does total reproductive effort evolve independently of offspring size? Evolution: international journal of organic evolution, 55 (6). pp. 1245-1248.

Lukoschek, Vimoksalehi, and McCormick, Mark I. (2001) Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection. Marine Biology, 138 (6). pp. 1099-1113.

Bellwood, David R., and Hughes, Terry P. (2001) Regional-scale assembly rules and biodiversity of coral reefs. Science, 292 (5521). pp. 1532-1534.

Ferry-Graham, Lara A., Wainwright, Peter C., Hulsey, C. Darrin, and Bellwood, David R. (2001) Evolution and mechanics of long jaws in butterflyfishes (Family Chaetodontidae). Journal of Morphology, 248 (2). pp. 120-143.

Pratchett, Morgan S. (2001) Influence of coral symbionts on feeding preferences of crown-of-thorns starfish Acanthaster planci in the western Pacific. Marine Ecology-Progress Series, 214. pp. 111-119.

Gust, Nick, Choat, J. Howard, and Mccormick, Mark I. (2001) Spatial variability in reef fish distribution, abundance, size and biomass : a multi-scale analysis. Marine Ecology Progress Series, 214. pp. 237-251.

Eagle, Janelle V., Jones, Geoffrey P., and McCormick, Mark I. (2001) A multi-scale study of the relationships between habitat use and the distribution and abundance patterns of three coral reef angelfishes (Pomacanthidae). Marine Ecology-Progress Series, 214. pp. 253-265.

Meekan, M.G., Ackerman, J.L., and Wellington, G.M. (2001) Demography and age structures of coral reef damselfishes in the tropical eastern Pacific Ocean. Marine Ecology-Progress Series, 212. pp. 223-232.

Stewart, B.D., and Jones, G.P. (2001) Associations between the abundance of piscivorous fishes and their prey on coral reefs: implications for prey-fish mortality. Marine Biology, 138 (2). pp. 383-397.

Ferry-Graham, Lara A., Wainwright, Peter C., and Bellwood, David R. (2001) Prey capture in long-jawed butterflyfishes (Chaetodontidae): the functional basis of novel feeding habits. Journal of Experimental Marine Biology and Ecology, 256 (2). pp. 167-184.

Baird, A.H., Sadler, C., and Pitt, M. (2001) Synchronous spawning of Acropora in the Solomon Islands. Coral Reefs, 19 (3). p. 286.

Schulz, Melissa K., and Alexander, C.G. (2001) Aggressive behaviour of Caprella Scaura Typica Mayer, 1890. (Crustacea: Amphipoda). Marine and Freshwater Behaviour and Physiology, 34 (3). pp. 181-187.

Molony, Brett W., and Sheaves, Marcus J. (2001) Challenges of external insemination in a tropical sparid fish, Acanthopagrus berda. Environmental Biology of Fishes, 61 (1). pp. 65-71.

Kritzer, J.P., Davies, C.R., and Mapstone, B.D. (2001) Characterizing fish populations: effects of sample size and population structure on the precision of demographic parameter estimates. Canadian Journal of Fisheries and Aquatic Sciences, 58 (8). pp. 1557-1568.

Sheaves, Marcus, and Molony, Brett (2001) Coherent patterns of abundance and size of a tropical snapper in dynamic estuary systems. Wetlands Ecology and Management, 9 (5). pp. 429-439.

Kesarcodi-Watson, A., Lucas, J.S., and Klumpp, D. (2001) Comparative feeding and physiological energetics of diploid and triploid Sydney rock oysters, Saccostrea commercialis. Aquaculture, 203 (1-2). pp. 177-193.

Kesarcodi-Watson, A., Lucas, J.S., and Klumpp, D. (2001) Comparative feeding and physiological energetics of diploid and triploid Sydney rock oysters, Saccostrea commercialis. II. Influences of food concentration and tissue energy distribution. Aquaculture, 203 (1-2). pp. 195-216.

Crossman, David J., Choat, J. Howard, Clements, Kendall D., Hardy, Tom, and McConochie, Jason (2001) Detritus as food for grazing fishes on coral reefs. Limnology and Oceanography, 46 (7). pp. 1596-1605.

Fisher, R., and Bellwood, D.R. (2001) Effects of feeding on the sustained swimming abilities of late-stage larval Amphiprion melanopus. Coral Reefs, 20 (2). pp. 151-154.

Chang, Marshall, and Southgate, Paul C. (2001) Effects of varying dietry fatty acid composition on growth and survival of seahorse, Hippocampus sp. juveniles. Aquarium Sciences and Conservation, 3 (1-3). pp. 205-214.

Vytopil, E., and Willis, B.L. (2001) Epifaunal community structure in Acropora spp. (Scleractinia) on the Great Barrier Reef: implications of coral morphology and habitat complexity. Coral Reefs, 20 (3). pp. 281-288.

Munday, Philip L. (2001) Fitness consequences of habitat use and competition among coral-dwelling fishes. Oecologia, 128 (4). pp. 585-593.

Pecl, G. (2001) Flexible reproductive strategies in tropical and temperate Sepioteuthis squids. Marine Biology, 138 (1). pp. 93-101.

Bastidas, C., Benzie, J.A.H., Uthicke, S., and Fabricius, K. (2001) Genetic differentiation among populations of a broadcast spawning soft coral, Sinularia flexibilis, on the Great Barrier Reef. Marine Biology, 138 (3). pp. 517-525.

Michalek-Wagner, K., and Willis, B.L. (2001) Impacts of bleaching on the soft coral Lobophytum compactum. I. Fecundity, fertilization and offspring viability. Coral Reefs, 19 (3). pp. 231-239.

Michalek-Wagner, K., and Willis, B.L. (2001) Impacts of bleaching on the soft coral Lobophytum compactum. II. Biochemical changes in adults and their eggs. Coral Reefs, 19 (3). pp. 240-246.

Munday, Philip L., Jones, Geoffrey P., and Caley, M. Julian (2001) Interspecific competition and coexistence in a guild of coral-dwelling fishes. Ecology, 82 (8). pp. 2177-2189.

Bellwood, D.R., and Wainwright, P.C. (2001) Locomotion in labrid fishes: implications for habitat use and cross-shelf biogeography on the Great Barrier Reef. Coral Reefs, 20 (2). pp. 139-150.

Wilson, S.K. (2001) Multiscale habitat associations of detrivorous blennies (Blenniidae: Salariini). Coral Reefs, 20 (3). pp. 245-251.

Green, Bridget S., and Mccormick, Mark I. (2001) Ontogeny of the digestive and feeding systems in the anemonefish Amphiprion melanopus. Environmental Biology of Fishes, 61 (1). pp. 73-83.

Emslie, Michael J., and Jones, Geoffrey P. (2001) Patterns of embryo mortality in a demersally spawning coral reef fish and the role of predatory fishes. Environmental Biology of Fishes, 60 (4). pp. 363-373.

Jerry, D. R., Elphinstone, M. S., and Baverstock, P. R. (2001) Phylogenetic relationships of Australian members of the family Percichthyidae inferred from mitochondrial 12S rRNA sequence data. Molecular Phylogenetics and Evolution, 18 (3). pp. 335-347.

Haine, Olivia S., Ridd, Peter V., and Rowe, Richard J. (2001) Range of electrosensory detection of prey by Carcharhinus melanopterus and Himantura granulata. Marine and Freshwater Research, 52 (3). pp. 291-296.

Bellwood, David R., and Fisher, Rebecca (2001) Relative swimming speeds in reef fish larvae. Marine Ecology-Progress Series, 211. pp. 299-303.

Michalek-Wagner, K. (2001) Seasonal and sex-specific variations in levels of photo-protecting mycosporine-like amino acids (MAAs) in soft corals. Marine Biology, 139 (4). pp. 651-660.

Caley, M. Julian, Buckley, Kathryn A., and Jones, Geoffrey P. (2001) Separating ecological effects of habitat fragmentation, degradation, and loss on coral commensals. Ecology, 82 (12). pp. 3435-3448.

Syms, Craig, and Jones, Geoffrey P. (2001) Soft corals exert no direct effects on coral reef fish assemblages. Oecologia, 127 (4). pp. 560-571.

Purcell, S.W., and Bellwood, D.R. (2001) Spatial patterns of epilithic algal and detrital resources on a windward coral reef. Coral Reefs, 20 (2). pp. 117-125.

Job, Suresh D., and Shand, Julia (2001) Spectral sensitivity of larval and juvenile coral reef fishes: implications for feeding in a variable light environment. Marine Ecology-Progress Series, 214. pp. 267-277.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2001) Territorial damselfishes as determinants of the structure of benthic communities on coral reefs. Oceanography and Marine Biology: an annual review, 39. pp. 355-389.

St John, Jill, Russ, Gary R., Brown, Ian W., and Squire, Lyle C. (2001) The diet of the large coral reef serranid Plectropomus leopardus in two fishing zones on the Great Barrier Reef, Australia. Fishery Bulletin, 99 (1). pp. 180-192.

Michalek-Wagner, K., Bourne, D.J., and Bowden, B.F. (2001) The effects of different strains of zooxanthellae on the secondary-metabolite chemistry and development of the soft-coral host Lobophytum compactum. Marine Biology, 138 (4). pp. 753-760.

Fulton, C.J., Bellwood, D.R., and Wainwright, P.C. (2001) The relationship between swimming ability and habitat use in wrasses (Labridae). Marine Biology, 139 (1). pp. 25-33.

Nankervis, L., Matthews, S.J., and Appleford, P. (2000) Effect of dietary non-protein energy source on growth, nutrient retention and circulating insulin-like growth factor I and triiodothyronine levels in juvenile barramundi, Lates calcarifer. Aquaculture, 191 (4). pp. 323-335.

Dudgeon, C.L., Gust, N., and Blair, D. (2000) No apparent genetic basis to demographic differences in scarid fishes across continental shelf of the Great Barrier Reef. Marine Biology, 137 (5-6). pp. 1059-1066.

Marnane, M.J. (2000) Site fidelity and homing behaviour in coral reef cardinalfishes. Journal of Fish Biology, 57 (6). pp. 1590-1600.

Ackerman, John L., and Bellwood, David R. (2000) Reef fish assemblages: a re-evaluation using enclosed rotenone stations. Marine Ecology-Progress Series, 206. pp. 227-237.

Ayre, David J., and Hughes, Terence P. (2000) Genotypic diversity and gene flow in brooding and spawning corals along the Great Barrier Reef, Australia. Evolution, 54 (5). pp. 1590-1605.

Van Herwerden, Lynne, Blair, David, and Agatsuma, Takeshi (2000) Multiple lineages of the mitochondrial gene NADH dehydrogenase subunit 1 (ND1) in parasitic helminths: implications for molecular evolutionary studies of facultatively anaerobic eukaryotes. Journal of Molecular Evolution, 51 (4). pp. 339-352.

Pit, J.H., and Southgate, P.C. (2000) When should pearl oyster, Pinctada margaritifera (L.), spat be transferred from the hatchery to the ocean? Aquaculture Research, 31 (10). pp. 773-778.

Van Oppen, M.J.H., Willis, B.L., Van Vugt, H.W.J., and Miller, D.J. (2000) Examination of species boundaries in the Acropora cervicornis group (Scleractinia, Cnidaria) using nuclear DNA sequence analyses. Molecular Ecology, 9 (9). pp. 1363-1373.

Anthony, Kenneth R.N., and Fabricius, Katharina E. (2000) Shifting roles of heterotrophy and autotrophy in coral energetics under varying turbidity. Journal of Experimental Marine Biology and Ecology, 252 (2). pp. 221-253.

Doroudi, M.S., and Southgate, P.C. (2000) The influence of algal ration and larval density on growth and survival of blacklip pearl oyster Pinctada margaritifera (L.) larvae. Aquaculture Research, 31 (8-9). pp. 621-626.

Fisher, Rebecca, Bellwood, David R., and Job, Suresh (2000) Development of swimming abilities in reef fish larvae. Marine Ecology-Progress Series, 202. pp. 163-173.

Baird, A.H., and Hughes, T.P. (2000) Competitive dominance by tabular corals: an experimental analysis of recruitment and survival of understorey assemblages. Journal of Experimental Marine Biology and Ecology, 251 (1). pp. 117-132.

Koh, Esther G. L., and Sweatman, Hugh (2000) Chemical warfare among scleractinians: bioactive natural products from Tubastraea faulkneri Wells kill larvae of potential competitors. Journal of Experimental Marine Biology and Ecology, 251 (2). pp. 141-160.

Hughes, Terence P., and Tanner, Jason E. (2000) Recruitment failure, life histories, and long-term decline of Caribbean corals. Ecology, 81 (8). pp. 2250-2263.

Hughes, T. P., Baird, A. H., Dinsdale, E. A., Moltschaniwskyj, N. A., Pratchett, M. S., Tanner, J. E., and Willis, B. L. (2000) Supply-side ecology works both ways: the link between benthic adults, fecundity, and larval recruits. Ecology, 81 (8). pp. 2241-2249.

Marshall, P.A., and Baird, A.H. (2000) Bleaching of corals on the Great Barrier Reef: differential susceptibilities among taxa. Coral Reefs, 19 (2). pp. 155-163.

Adams, S., Mapstone, B.D., Russ, G.R., and Davies, C.R. (2000) Geographic variation in the sex ratio, sex specific size, and age structure of Plectropomus leopardus (Serranidae) between reefs open and closed to fishing on the Great Barrier Reef. Canadian Journal of Fisheries and Aquatic Sciences, 57 (7). pp. 1448-1458.

Southgate, Paul C., and Beer, Andrew C. (2000) Growth of blacklip pearl oyster (Pinctada margaritifera) juveniles using different nursery culture techniques. Aquaculture, 187 (1-2). pp. 97-104.

Baird, A.H., and Babcock, R.C. (2000) Morphological differences among three species of newly settled pocilloporid coral recruits. Coral Reefs, 19 (2). pp. 179-183.

Sheaves, Marcus, and Molony, Brett (2000) Short-circuit in the mangrove food chain. Marine Ecology Progress Series, 199. pp. 97-109.

Stewart, Bryce D., and Beukers, Joanne S. (2000) Baited technique improves censuses of cryptic fish in complex habitats. Marine Ecology-Progress Series, 197. pp. 259-272.

Grutter, Alexandra S. (2000) Ontogenetic variation in the diet of the cleaner fish Labroides dimidiatus and its ecological consequences. Marine Ecology-Progress Series, 197. pp. 241-246.

Norton, John H., Lucas, John S., Turner, Ian, Mayer, Robert J., and Newnham, Raymond (2000) Approaches to improve cultured pearl formation in Pinctada margaritifera through use of relaxation, antiseptic application and incision closure during bead insertion. Aquaculture, 184 (1-2). pp. 1-17.

Pratchett, M., Vytopil, E., and Parks, P. (2000) Coral crabs influence the feeding patterns of crown-of-thorns starfish. Coral Reefs, 19 (1). p. 36.

Semmens, Jayson M., and Moltschaniwskyj, Natalie A. (2000) An examination of variable growth in the loliginid squid Sepioteuthis lessoniana: a whole animal and reductionist approach. Marine Ecology-Progress Series, 193. pp. 135-141.

Van Herwerden, Lynne, Gasser, Robin B., and Blair, David (2000) ITS-1 ribosomal DNA sequence variants are maintained in different species and strains of Echinococcus. International Journal for Parasitology, 30 (2). pp. 157-169.

Beer, Andrew C., and Southgate, Paul C. (2000) Collection of pearl oyster (family Pteriidae) spat at Orpheus Island, Great Barrier Reef (Australia). Journal of Shellfish Research, 19 (2). pp. 821-826.

Yukihira, H., Lucas, J.S., and Klumpp, D.W. (2000) Comparative effects of temperature on suspension feeding and energy budgets of the pearl oysters Pinctada margaritifera and P. maxima. Marine Ecology Progress Series, 195. pp. 179-188.

Bigelow, P.R., and Alexander, C.G. (2000) Diatoms on the cirri of tropical barnacles. Journal of the Marine Biological Association of the United Kingdom, 80 (4). pp. 737-738.

Syms, Craig, and Jones, Geoffrey P. (2000) Disturbance, habitat structure, and the dynamics of a coral-reef fish community. Ecology, 81 (10). pp. 2714-2729.

Michalek-Wagner, Kirsten, and Bowden, Bruce F. (2000) Effects of bleaching on secondary metabolite chemistry of alcyonacean soft corals. Journal of Chemical Ecology, 26 (7). pp. 1543-1562.

Arvedlund, M., McCormick, M.I., and Ainsworth, T. (2000) Effects of photoperiod on growth of larvae and juveniles of the anemonefish Amphiprion melanopus. Naga - The ICLARM Quarterly , 23 (2). pp. 18-23.

Anthony, K.R.N. (2000) Enhanced particle-feeding capacity of corals on turbid reefs (Great Barrier Reef, Australia). Coral Reefs, 19 (1). pp. 59-67.

Si, Aung, Alexander, C.G., and Bellwood, O. (2000) Habitat partitioning by two wood-boring invertebrates in a mangrove system in tropical Australia. Journal of the Marine Biological Association of the United Kingdom, 80 (6). pp. 1131-1132.

Arvedlund, Michael, Bundgaard, Ingvar, and Nielsen, Lis E. (2000) Host imprinting in anemonefishes (Pisces: Pomacentridae): does it dictate spawning site preferences? Environmental Biology of Fishes, 58 (2). pp. 203-213.

Munday, Philip L. (2000) Interactions between habitat use and patterns of abundance in coral-dwelling fishes of the genus Gobiodon. Environmental Biology of Fishes, 58 (4). pp. 355-369.

Job, Suresh D., and Bellwood, David R. (2000) Light sensitivity in larval fishes: implications for vertical zonation in the pelagic zone. Limnology and Oceanography, 45 (2). pp. 362-371.

Moltschaniwskyj, Natalie A., and Semmens, Jayson M. (2000) Limited use of stored energy reserves for reproduction by the tropical loliginid squid Photololigo sp. Journal of Zoology, 251 (3). pp. 307-313.

McCauley, R.D., and Cato, D.H. (2000) Patterns of fish calling in a nearshore environment in the Great Barrier Reef. Philosophical Transactions of the Royal Society of London Series B-Biological SciencesPhilosophical Transactions of the Royal Society of London Series, 355. pp. 1289-1293.

Zeller, D.C., and Russ, G.R. (2000) Population estimates and size structure of Plectropomus leopardus (Pisces : Serranidae) in relation to no-fishing zones: mark-release-resighting and underwater visual census. Marine and Freshwater Research, 51 (3). pp. 221-228.

Bellwood, David R., and Randall, John E. (2000) Pseudojuloides severnsi, a new species of wrasse from Indonesia and Sri Lanka (Perciformes: Labridae). Journal of South Asian Natural History, 5 (1). pp. 1-5.

Tanner, Jason E. (2000) Stochastic density dependence in population size of a benthic clonal invertebrate: the regulating role of fission. Oecologia, 122 (4). pp. 514-520.

Omundsen, S.L., Sheaves, M.J., and Molony, B.W. (2000) Temporal population dynamics of the swarming shrimp, Acetes sibogae australis, in a tropical near-shore system. Marine and Freshwater Research, 51 (3). pp. 249-254.

Wilson, S.K. (2000) Trophic status and feeding selectivity of blennies (Blenniidae: Salariini). Marine Biology, 136 (3). pp. 431-437.

Hernaman, V., Munday, P.L., and Schläppy, M. (2000) Validation of otolith growth-increment periodicity in tropical gobies. Marine Biology, 137 (4). pp. 715-726.

Arvedlund, Michael, Larsen, Kim, and Winsor, Heather (2000) The embryonic development of the olfactory system in Amphiprion melanopus (Perciformes: Pomacentridae) related to the host imprinting hypothesis. Journal of the Marine Biological Association of the United Kingdom, 80 (6). pp. 1103-1109.

Dijkstra, Henk, and Southgate, Paul C. (2000) A new living scallop (Bivalvia: Pectinidae) from the south-western Pacific. Molluscan Research, 20 (2). pp. 13-18.

Frisch, A.J., and Anderson, T.A. (2000) The response of coral trout (Plectropomus leopardus) to capture, handling and transport and shallow water stress. Fish Physiology and Biochemistry, 23 (1). pp. 23-34.

Stobart, Ben (2000) A taxonomic reappraisal of Montipora digitata based on genetic and morphometric evidence. Zoological Studies, 39 (3). pp. 179-190.

Hughes, T.P., Baird, A.H., Dinsdale, E.A., Moltschaniwskyj, Natalie, Pratchett, M.S., Tanner, J.E., and Willis, B.L. (1999) Patterns of recruitment and abundance of corals along the Great Barrier Reef. Nature, 397. pp. 59-63.

Anthony, Kenneth R.N. (1999) Coral suspension feeding on fine particulate matter. Journal of Experimental Marine Biology and Ecology, 232 (1). pp. 85-106.

Stump, R.J.W., and Lucas, J.S. (1999) Age estimation and patterns of growth in Acanthaster planci: a reply to Souter et al. (1997). Marine and Freshwater Research, 50 (1). pp. 71-72.

Yukihira, H., Klumpp, D.W., and Lucas, J.S. (1999) Feeding adaptations of the pearl oysters Pinctada margaritifera and P. maxima to variations in natural particulates. Marine Ecology Progress Series, 182. pp. 161-173.

Van Herwerden, Lynne, Blair, David, and Agatsuma, Takeshi (1999) Genetic diversity in parthenogenetic triploid Paragonimus westermani. International Journal for Parasitology, 29 (9). pp. 1477-1482.

Friedman, Kim J., and Southgate, Paul C. (1999) Growout of blacklip pearl oysters, Pinctada margaritifera collected as wild spat in the Solomon Islands. Journal of Shellfish Research, 18 (1). pp. 159-167.

Doroudi, Mehdi S., Southgate, Paul C., and Mayer, Robert J. (1999) Growth and survival of blacklip pearl oyster larvae fed different densities of microalgae. Aquaculture International, 7 (3). pp. 179-187.

Arvedlund, Michael, McCormick, Mark I., Fautin, Daphne G., and Bildsøe, Mogens (1999) Host recognition and possible imprinting in the anemonefish Amphiprion melanopus (Pisces: Pomacentridae). Marine Ecology Progress Series, 188. pp. 207-218.

van Herwerden, Lynne, Blair, David, and Agatsuma, Takeshi (1999) Intra- and interindividual variation in ITS1 of Paragonimus westermani (Trematoda: Digenea) and related species: implications for phylogenetic studies. Molecular Phylogenetics and Evolution, 12 (1). pp. 67-73.

Schwarzkopf, Lin, Blows, Mark W., and Caley, M. Julian (1999) Life-history consequences of divergent selection on egg size in Drosophila melanogaster. American Naturalist, 154 (3). pp. 333-340.

Sheaves, M.J., Molony, B.W., and Tobin, A.J. (1999) Spawning migrations and local movements of a tropical sparid fish. Marine Biology, 133 (1). pp. 123-128.

Doroudi, M.S., Southgate, P.C., and Mayer, R.J. (1999) The combined effects of temperature and salinity on embryos and larvae of the black-lip pearl oyster, Pinctada margaritifera (L.). Aquaculture Research, 30 (4). pp. 271-277.

Partridge, G.J., and Southgate, P.C. (1999) The effect of binder composition on ingestion and assimilation of microbound diets (MBD) by barramundi Lates calcarifer Bloch larvae. Aquaculture Research, 30 (11-12). pp. 879-886.

Southgate, Paul C., and Kavanagh, Kathryn (1999) The effect of dietary n-3 highly unsaturated fatty acids on growth, survival and biochemical composition of the coral reef damselfish Acanthochromis polyacanthus. Aquatic Living Resources, 12 (1). pp. 31-36.

Collins, A.L., and Anderson, T.A. (1999) The role of food availability in regulating reproductive development in female golden perch. Journal of Fish Biology, 55 (1). pp. 94-104.

Taylor, Joseph J., Southgate, Paul C., and Rose, Robert A. (1998) Assessment of artificial substrates for collection of hatchery-reared silver-lip pearl oyster (Pinctada maxima, Jameson) spat. Aquaculture, 162 (3-4). pp. 219-230.

Yukihira, H., Klumpp, D.W., and Lucas, J.S. (1998) Comparative effects of microalgal species and food concentration on suspension feeding and energy budgets of the pearl oysters Pinctada margaritifera and P. maxima (Bivalvia: Pteriidae). Marine Ecology Progress Series, 171. pp. 71-84.

Yukihira, H., Klumpp, David, and Lucas, J.S. (1998) Effects of body size on suspension feeding and energy budgets of the pearl oysters Pinctada margaritifera and P. maxima. Marine Ecology Progress Series, 170. pp. 119-130.

Taylor, Joseph J., Southgate, Paul C., Rose, Robert A., and Keegan, Anthony J. (1998) Effects of larval set density on subsequent growth and survival of the silver-lip pearl oyster Pinctada maxima (Jameson). Journal of Shellfish Research, 17 (1). pp. 281-283.

Taylor, Joseph J., Southgate, Paul C., and Rose, Robert A. (1998) Effects of mesh covers on the growth and survival of silver-lip pearl oyster (Pinctada maxima, Jameson) spat. Aquaculture, 162 (3-4). pp. 241-246.

Van Herwerden, L., Blair, D., and Agatsuma, T. (1998) Intra- and inter-specific variation in nuclear ribosomal internal transcribed spacer 1 of the Schistosoma japonicum species complex. Parasitology, 116 (4). pp. 311-317.

Zeller, Dirk C., and Russ, Garry R. (1998) Marine reserves: patterns of adult movement of the coral trout (Plectropomus leopardus (Serranidae)). Canadian Journal of Fisheries and Aquatic Sciences, 55 (4). pp. 917-924.

Baird, Andrew (1998) Mass bleaching of corals on the Great Barrier Reef. Coral Reefs, 17 (4). p. 376.

Molony, B.W., and Sheaves, M.J. (1998) Otolith increment widths and lipid contents during starvation and recovery feeding in adult Ambassis vachelli (Richardson). Journal of Experimental Marine Biology and Ecology, 221. pp. 257-276.

Molony, Brett W., and Sheaves, Marcus J. (1998) Variations in condition and body constitution in a tropical estuarine fish with year-round recruitment. Mangroves and Salt Marshes , 2 (3). pp. 177-185.

Blair, David, van Herwerden, Lynne, Hirai, Hirohisa, Taguchi, Takahiro, Habe, Shigehisa, Hirata, Mizuki, Lai, Karen, Upatham, Suchart, and Agatsuma, Takeshi (1997) Relationships between Schistosoma malayensis and other Asian schistosomes deduced from DNA sequences. Molecular and Biochemical Parasitology, 85 (2). pp. 259-263.

Shine, R., Schwarzkopf, L., and Caley, M.J. (1996) Energy, risk, and reptilian reproductive effort: a reply to Niewiarowski and Dunham. Evolution, 50 (5). pp. 2111-2114.

Caley, M.J., Carr, M.H., Hixon, M.A., Hughes, T.P., Jones, G.P., and Menge, B.A. (1996) Recruitment and the local dynamics of open marine populations. Annual Review of Ecology and Systematics, 27. pp. 477-500.

Tanner, Jason E., Hughes, Terence P., and Connell, Joseph H. (1996) The role of history in community dynamics: a modelling approach. Ecology, 77 (1). pp. 108-117.

Hodgson, Gregor, Ogden, John C., and Hughes, Terrence P. (1994) Coral-reef catastrophe. Science, 266 (5193). pp. 1930-1933.

Stobart, B., and Benzie, J.A.H. (1994) Allozyme electrophoresis demonstrates that the scleractinian coral Montipora digitata is two species. Marine Biology, 118 (2). pp. 183-190.

Tanner, Jason E., Hughes, Terence P., and Connell, Joseph H. (1994) Species coexistence, keystone species, and succession: a sensitivity analysis. Ecology, 75 (8). pp. 2204-2219.

Belda, C.A., Lucas, J.S., and Yellowlees, D. (1993) Nutrient limitation in the giant clam-zooxanthellae symbiosis: effects of nutrient supplements on growth of the symbiotic partners. Marine Biology, 117 (4). pp. 655-664.

Martin-Smith, Keith Michael (1993) Abundance of mobile epifauna: The role of habitat complexity and predation by fishes. Journal of Experimental Marine Biology and Ecology, 174 (2). pp. 243-260.

McCormick, M.I., and Molony, B.W. (1992) Effects of feeding history on the growth characteristics of a reef fish at settlement. Marine Biology, 114 (1). pp. 165-173.

Clements, K.D. (1991) Endosymbiotic communities of two herbivorous labroid fishes, Odax cyanomelas and O. pullus. Marine Biology, 109 (2). pp. 223-229.

Jones, G.P., Kaly, U.L., and Clements, K. (1991) Preliminary records of the coral reef fishes of Tuvalu. South Pacific Journal of Natural Science, 11. pp. 40-57.

Molony, B.W., and Choat, J.H. (1990) Otolith increment widths and somatic growth rate: the presence of a time-lag. Journal of Fish Biology, 37 (4). pp. 541-551.

Clements, K.D., Sutton, D.C., and Choat, J.H. (1989) Occurrence and characteristics of unusual protistan symbionts from surgeonfishes (Acanthuridae) of the Great Barrier Reef, Australia. Marine Biology, 102 (3). pp. 403-412.

Kettle, B.T., and Lucas, J.S. (1987) Biometric relationships between organ indices, fecundity, oxygen consumption and body size in Acanthaster planci (L.) (Echinodermata; Asteroidea). Bulletin of Marine Science, 41 (2). pp. 541-555.

Babcock, R.C., Bull, G.D., Harrison, P.L., Heyward, A.J., Oliver, J.K., Wallace, C.C., and Willis, B.L. (1986) Synchronous spawnings of 105 scleractinian coral species on the Great Barrier Reef. Marine Biology, 90 (3). pp. 79-94.

Babcock, R.C., and Heyward, A.J. (1986) Larval development of certain gamete-spawning scleractinian corals. Coral Reefs, 5 (3). pp. 111-116.

Heyward, A.J., and Babcock, R.C. (1986) Self- and cross-fertilization in scleractinian corals. Marine Biology, 90 (2). pp. 191-195.

Heyward, A.J., and Collins, J.D. (1985) Growth and sexual reproduction in the scleractinian coral Montipora digitata (Dana). Australian Journal of Marine and Freshwater Research, 36 (3). pp. 441-446.

Babcock, Russell C. (1984) Reproduction and distribution of two species of Goniastrea (Scleractinia) from the Great Barrier Reef Province. Coral Reefs, 2 (4). pp. 187-195.

Harrison, Peter L., Babcock, Russell C., Bull, Gordon D., Oliver, James K., Wallace, Carden C., and Willis, Bette L. (1984) Mass spawning in tropical reef corals. Science, 223 (4641). pp. 1186-1189.

Book Chapter

Pratchett, Morgan S., Chandler, Josie F., Choukroun, Severine M., Doll, Peter C., Lang, Bethan J., Kwong, Sarah, Chen, Carla C.M., Emslie, Mike J., Caballes, Ciemon F., Uthicke, Sven, and Matthews, Sam A. (2024) Biophysical Processes Involved in the Initiation and Spread of Population Irruptions of Crown-of-Thorns Starfish on the Great Barrier Reef. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs: Physical and Biological Links in the Great Barrier Reef. CRC Press, Boca Raton, Florida, USA, pp. 290-305.

Kingsford, Michael J., and Wolanski, Eric (2024) The Emergence of Biophysical Sciences for the Great Barrier Reef. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 3-8.

Hair, Cathy, Foale, Simon, Kinch, Jeff, Daniels, Nicholas, Minimulu, Peter, and Southgate, Paul C. (2024) Future prospects for sea cucumber mariculture in Papua New Guinea and the Pacific Islands. In: Mercier, Annie, Hamel, Jean François, Suhrbier, Andrew D., and Pearce, Christopher M., (eds.) The World of Sea Cucumbers: Challenges, Advances, and Innovations. Elsevier, pp. 801-817.

Wolanski, Eric, and Kingsford, Michael J. (2024) Great Barrier Reef Biophysics. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 438-451.

Foale, Simon, Hair, Cathy, and Kinch, Jeff (2024) Growing Chinese dominance of the bêche-de-mer trade: A Papua New Guinean resource sector characterised by paradox. In: Hayes, Anna, Henry, Rosita, and Wood, Michael, (eds.) The Chinese in Papua New Guinea: Past, Present and Future. ANU Press, Canberra, ACT, Australia, pp. 117-130.

Wolanski, Eric, Kingsford, Michael J., Lambrechts, Jonathan, and Marmorino, George (2024) The Physical Oceanography of the Great Barrier Reef:. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 9-34.

Donelson, Jennifer M., Romans, Pascal, Yamanaka, Sakuto, Kinoshita, Masato, and Roux, Natasha (2023) Anemonefish Husbandry. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes: Model Organisms for Marine Science. CRC Press, Boca Raton, Florida, USA, pp. 237-251.

Schunter, Celia, Donelson, Jennifer M., Munday, Philip L., and Ravasi, Timothy (2023) Resilience and Adaptation to Local and Global Environmental Change. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes: Model Organisms for Marine Science. CRC Press, Boca Raton, Florida, USA, pp. 253-273.

Ross, Pauline M., Scanes, Elliot, Byrne, Maria, Ainsworth, Tracy, Donelson, Jennifer M., Foo, Shawna A., Hutchings, Pat, Thiyagarajan, Vengatesen, and Parker, Laura M. (2023) Surviving the Anthropocene: the resilience of marine animals to climate change. In: Hawkins, S.J., Todd, P.A., Russell, B.D., Lemasson, A.J., Allcock, A.L., Byrne, M., Firth, L.B., Lucas, C.H., Marzinelli, E.M., Mumby, P.J., Sharples, J., Smith, I.P., and Swearer, S.E., (eds.) Oceanography and Marine Biology: An Annual Review. Taylor & Francis, pp. 35-80.

Rummer, Jodie L., and Illing, Björn (2022) Chapter 7 - Coral reef fishes in a multi-stressor world. In: Strailey, Katherine K., and Suski, Cory D., (eds.) Fish Physiology. Elsevier, Cambridge, United States, pp. 325-391.

Bourne, David G, Smith, Hillary, and Page, Cathie (2022) Diseases of scleractinian corals. In: Rowley, Andrew F., Coates, Christopher J., and Whitten, Miranda W., (eds.) Invertebrate Pathology. Oxford University Press, Oxford, UK, pp. 77-108.

Able, Kenneth W., Simenstad, Charles A., Strydom, Nadine A., Bradley, Michael, and Sheaves, Marcus (2022) Habitat Use and Connectivity. In: Whitfield, Alan K., Able, Kenneth W., Blaber, Stephen J.M., and Elliott, Michael, (eds.) Fish and Fisheries in Estuaries: A Global Perspective. Wiley-Blackwell, pp. 188-254.

Jones, Geoffrey P., Srinivasan, Maya, Galbraith, Gemma F., Berumen, Michael L., and Planes, Serge (2022) Saving Nemo: Extinction Risk, Conservation Status, and Effective Management Strategies for Anemonefishes. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes. CRC Press, Boca Raton, FL, USA, pp. 285-298.

Zeng, Chaoshu, Rotllant, Guiomar, Giménez, Luis, and Romano, Nicholas (2021) Effects of environmental conditions on larval growth and development. In: Anger, Klaus, Harzsch, Steffen, and Thiel, Martin, (eds.) Developmental Biology and Larval Ecology. The Natural History of the Crustacea, 7 . Oxford University Press, Oxford, UK, pp. 195-222.

Johnson, Johanna E., Allain, Valerie, Basel, Britt, Bell, Johann D., Chin, Andrew, Dutra, Leo X. C., Hooper, Eryn, Loubser, David, Lough, Janice, Moore, Bradley R., and Nicol, Simon (2020) Impacts of climate change on marine resources in the Pacific Island region. In: Kumar, Lalit, (ed.) Climate Change and Impacts in the Pacific. Springer Climate . Springer, Cham, Switzerland, pp. 359-402.

Pratchett, Morgan, Bridge, Thomas, Brodie, Jon, Cameron, Darren, Day, Jonathan, Emslie, Mike, Grech, Alana, Hamann, Mark, Heron, Scott, Hoey, Andrew, Hoogenboom, Mia, Lough, Janice, Morrison, Tiffany, Osborne, Kate, Read, Mark, Schauble, Chloe, Smithers, Scott, Sweatman, Hugh, and Waterhouse, Jane (2019) Australia's Great Barrier Reef. In: Sheppard, Charles, (ed.) World Seas: an environmental evaluation. Elsevier, London, UK, pp. 333-362.

Hutchings, P. A., and Kingsford, M. J. (2019) Biodiversity. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 183-189.

Kingsford, M. J., Syms, C., Srinivasan, M., and Jones, G. P. (2019) Coral reef habitats and their influence on reef assemblages. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 51-62.

Munday, Philip L., Jarrold, Michael D., and Nagelkerken, Ivan (2019) Ecological effects of elevated CO₂ on marine and freshwater fishes: from individual to community effects. In: Grosell, Martin, Munday, Philip L., Farrell, Anthony P., and Brauner, Colin J., (eds.) Carbon Dioxide. Fish Physiology, 37 . Academic Press, Cambridge, MA, USA, pp. 323-368.

Chin, A., Cameron, D., and Saunders, R. (2019) Fisheries of the Great Barrier Reef. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Melbourne, VIC, Australia, pp. 117-130.

Zeng, Chaoshu, Lucas, John, and Southgate, Paul C. (2019) Freshwater decapod crustaceans. In: Lucas, John S., Southgate, Paul C., and Tucker, Craig S., (eds.) Aquaculture: farming aquatic animals and plants. John Wiley & Sons., Hoboken, NJ, USA, pp. 527-548.

Hutchings, P. A., Kingsford, M. J., and Hoegh-Guldberg, Ove (2019) Introduction to the Great Barrier Reef. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 1-5.

Jones, Clive, Anh, Tuan Le, and Priyambodo, Bayu (2019) Lobster aquaculture development in Vietnam and Indonesia. In: Radhakrishnan, E. V., Phillips, Bruce F., and Achamveetil, Gopalakrishnan, (eds.) Lobsters: Biology, Fisheries and Aquaculture. Springer, Singapore, pp. 541-570.

Kingsford, M. J., and Wolanski, E. (2019) Oceanography. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef. Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 37-49.

Blair, David (2019) Paragonimiasis. In: Toledo, Rafael, and Fried, Bernard, (eds.) Digenetic Trematodes. Advances in Experimental Medicine and Biology, 1154 . Springer Nature Switzerland AG, Cham, Switzerland, pp. 105-138.

Hutson, Kate S., and Cain, Kenneth D. (2019) Pathogens and Parasites. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, Hoboken, NJ, USA, pp. 217-246.

Gershwin, L., and Kingsford, M. J. (2019) Pelagic jellyfishes and comb jellies. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 247-256.

Kingsford, M. J., and Mckinnon, A. D. (2019) Plankton. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 191-206.

Choat, J.H., Russell, B.C., and Chin, A. (2019) The fish assemblages of the Great Barrier Reef: their diversity and origin. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO, Melbourne, VIC, Australia, pp. 389-406.

Nelson, Paul N., Huth, Neil, Sheaves, Marcus, Bessou, Cécile, Pardon, Lénaïc, Lim, HanShe, and Kookana, Rai S. (2018) Modelling environmental impacts of agriculture, focusing on oil palm. In: Rival, Alain, (ed.) Achieving Sustainable Cultivation of Oil Palm - Volume 2: diseases, pests, quality and sustainability. Burleigh Dodds Series in Agricutultural Science, 2 . Burleigh Dodd Science Publishing, Cambridge, UK, pp. 265-314.

Heupel, Michelle R., Kessel, Steven T., Matley, Jordan K., and Simpfendorfer, Colin A. (2018) Acoustic telemetry. In: Carrier, Jeffrey C., Heithaus, Michael R., and Simpfendorfer, Colin A., (eds.) Shark Research: emerging technologies and applications for the field and laboratory. Marine Biology Series . CRC Press, Boca Raton, FL, USA, pp. 133-156.

Robinson, Natasha M., Legge, Sarah, Scheele, Benjamin C., Lindenmayer, David B., Southwell, Darren M., Wintle, Brendan A., Bickerton, Doug, Brooks, Lyndon, Carter, Oberon, Dickman, Chris, Gillespie, Graeme, Kanowski, John, Koleck, Jessica, Lahoz-Monfort, Jose J., Lintermans, Mark, Marsh, Helene, Paltridge, Rachel, Radford, Jim, Skroblin, Anja, and Wayne, Adrian (2018) Essential principles to guide monitoring of threatened biodiversity. In: Legge, Sarah, Lindenmayer, David B., Robinson, Natasha M., Scheele, Benjamin C., Southwell, Darren M., and Wintle, Brendan A., (eds.) Monitoring Threatened Species and Ecological Communities. CSIRO, Melbourne, VIC, Australia, pp. 427-438.

Kannah, R. Yukesh, Velu, Chinnathambi, Banu, J. Rajesh, Heimann, Kirsten, and Karthikeyan, Obulisamy Parthiba (2018) Food waste valorization by microalgae. In: Singhania, Reeta Rani, Agarwal, Rashmi Avinash, Kumar, R. Praveen, and Sukumaran, Rajeev K., (eds.) Waste to Wealth. Energy, Environment and Sustainability . Springer, Singapore, pp. 319-342.

Hutson, Kate, Brazenor, Alexander, Vaughan, David, and Trujillo Gonzalez, Alejandro (2018) Monogenean parasite cultures: current techniques and recent advances. In: Rollinson, D., and Stothard, J.R., (eds.) Advances in Parasitology. Advances in Parasitology, 99 . Elsevier, London, UK, pp. 61-91.

Rigby, Cassandra L., Foley, William J., and Simpfendorfer, Colin A. (2018) Near-infrared spectroscopy for shark ageing and biology. In: Carrier, Jeffrey C., Heithaus, Michael R., and Simpfendorfer, Colin A., (eds.) Shark Research: emerging technologies and applications for the field and laboratory. Marine Biology Series . CRC Press, Boca Raton, FL, USA, pp. 201-217.

Robinson, Natasha M., Morgain, Rachel, Legge, Sarah, Scheele, Benjamin C., Lindenmayer, David B., Southwell, Darren M., Bennison, Kerrie, Benshemesch, Joe, Bickerton, Doug, Brooks, Lyndon, Carter, Oberon, Dickman, Chris, Ehmke, Glenn, Kanowski, John, Koleck, Jessica, Lintermans, Mark, Marsh, Helene, Oliver, Damon, Platridge, Rachel, Radford, Jim, Skroblin, Anja, Wayne, Adrian, and Woinarski, John C.Z. (2018) Organisational perspectives on threatened species monitoring. In: Legge, Sarah, Lindenmayer, David B., Robinson, Natasha M., Scheele, Benjamin C., Southwell, Darren M., and Wintle, Brendan A., (eds.) Monitoring Threatened Species and Ecological Communities. CSIRO, Melbourne, VIC, Australia, pp. 413-425.

Johnson, Johanna E., Bell, Johann D., Allain, Valerie, Hanich, Quentin, Lehodey, Patrick, Moore, Brad R., Nicol, Simon, Pickering, Tim, and Senina, Inna (2018) The Pacific Island region: fisheries, aquaculture and climate change. In: Phillips, Bruce F., and Pérez-Ramírez, Mónica, (eds.) Climate Change Impacts on Fisheries and Aquaculture: a global analysis. Wiley-Blackwell, Hoboken, NJ, USA, pp. 333-379.

Trujillo-Gonzalez, Alejandro, Becker, Joy A., and Hutson, Kate S. (2018) Parasite dispersal from the ornamental goldfish trade. In: Rollinson, D., and Stothard, J.R., (eds.) Advances in Parasitology. Elsevier, London, UK, pp. 239-281.

Neveux, Nicolas, Bolton, John J., Bruhn, Annette, Roberts, David A., and Ras, Monique (2018) The bioremediation potential of seaweeds: recycling nitrogen, phosphorus, and other waste products. In: La Barre, Stéphane, and Bates, Stephen S., (eds.) Blue Biotechnology: production and use of marine molecules. Wiley-VCH, Weinheim, Germany, pp. 217-239.

Marsh, Helene, Brooks, Lyndon, and Hagihara, Rie (2018) The challenge of monitoring coastal marine mammals. In: Legge, Sarah, Lindenmayer, David B., Robinson, Natasha M., Scheele, Benjamin C., Southwell, Darren M., and Wintle, Brendan A., (eds.) Monitoring Threatened Species and Ecological Communities. CSIRO, Melbourne, VIC, Australia, pp. 291-302.

Belpaire, Claude, Pujolar, José Martin, Geeraerts, Caroline, and Maes, Gregory E. (2016) Contaminants in eels and their role in the collapse of the eel stocks. In: Arai, Takaomi, (ed.) Biology and Ecology of Anguillid Eels. CRC Press, Boca Raton, FL, USA, pp. 225-250.

Heimann, Kirsten, Cires, Samuel, and Karthikeyan, Obulisamy P. (2016) Cultivation of microalgae: implications for the carbon footprint of aquaculture and agriculture. In: Muthu, Subramanian Senthilkannan, (ed.) The Carbon Footprint Handbook. CRC Press, Boca Raton, FL, USA, pp. 389-430.

Pujolar, José Martin, and Maes, Gregory E. (2016) Evolutionary genomics of North Atlantic eels: current status and perspectives. In: Arai, Takaomi, (ed.) Biology and Ecology of Anguillid Eels. CRC Press, Boca Raton, FL, USA, pp. 36-51.

Simpson, Stephen D., Radford, Andrew N., Holles, Sophie , Ferrari, Maud C.O., Chivers, Douglas P., McCormick, Mark I., and Meekan, Mark G. (2016) Small-boat noise impacts natural settlement behavior of coral reef fish larvae. In: Popper, Arthur N. , and Hawkins, Anthony, (eds.) The Effects of Noise on Aquatic Life II. Advances in Experimental Medicine and Biology, 875 . Springer, New York, NY, USA, pp. 1041-1048.

Bourne, David G., Ainsworth, Tracy D., and Willis, Bette L. (2016) White syndromes of Indo-Pacific corals. In: Woodley, Cheryl M., Downs, Craig A., Bruckner, Andrew W., Porter, James W., and Galloway, Sylvia B., (eds.) Diseases of Coral. John Wiley & Sons, Hoboken, NJ, USA, pp. 300-331.

Heimann, Kirsten, and Sparrow, Leanne (2015) Ciguatera: Tropical Reef Fish Poisoning. In: Kim, Se-Kwon, (ed.) Handbook of Marine Microalgae: Biotechnolgy Advances. Academic Press, London, UK, pp. 547-558.

Wenger, Amelia S., Fabricius, Katharina E., Jones, Geoffrey P., and Brodie, Jon E. (2015) Effects of sedimentation, eutrophication and chemical pollution on coral reef fishes. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 145-153.

Jones, Geoffrey P. (2015) Mission impossible: unlocking the secrets of coral reef fish dispersal. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 16-27.

MacNeil, M. Aaron, and Connolly, Sean R. (2015) Multi-scale patterns and processes in reef fish abundance. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 116-124.

Heimann, Kirsten, and Cirés, Samuel (2015) N2-fixing cyanobacteria: ecology and biotechnological applications. In: Kim, Se-Kwon, (ed.) Handbook of Marine Microalgae: Biotechnolgy Advances. Academic Press, London, UK, pp. 501-515.

Bellwood, David R., Goatley, Christopher H.R., Cowman, Peter F., and Bellwood, Orpha (2015) The evolution of fishes on coral reefs: fossils, phylogenies and functions. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 55-63.

Sheaves, Marcus, Abrantes, Kátya G., and Johnston, Ross (2014) Deluge Inlet, a pristine small tropical estuary in north-eastern Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 261-275.

De Jesus-Ayson, Evelyn Grace, Ayson, Felix G., and Thepot, Valentin (2014) Early development and seed production of Asian seabass, Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 16-30.

Hobbs, Jean-Paul A., van Herwerden, Lynne, Pratchett, Morgan S., and Allen, Gerald R. (2014) Hybridisation among butterflyfishes. In: Pratchett , Morgan S., Berumen , Michael L., and Kapoor , B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 48-69.

Carton, Alexander G., and Jones, Ben (2014) Post-harvest quality in farmed Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 229-257.

Kingsford, Michael J., and Mooney, Christopher J. (2014) The ecology of box jellyfishes (Cubozoa). In: Pitt, Kylie A., and Lucas, Cathy H., (eds.) Jellyfish Blooms. Springer, Dordrecht, The Netherlands, pp. 267-302.

Jerry, Dean R., and Smith-Keune, Carolyn (2014) The genetics of Asian seabass. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 137-177.

Heimann, Kirsten (2013) Algal cell biology: important tools to understand metal and herbicide toxicity. In: Heimann, Kirsten, and Katsaros, Christos, (eds.) Advances in Algal Cell Biology. Marine and Freshwater Botany . Walter de Gruyter, Berlin, Germany, pp. 191-210.

Heimann, Kirsten, Klerks, Paul L., and Hasenstein, Karl H. (2013) Dinoflagellate bioluminescence: a key concept for studying organelle movement. In: Heimann, Kirsten, and Katsaros, Christos, (eds.) Advances in Algal Cell Biology. Marine and Freshwater Botany . Walter de Gruyter, Berlin, Germany, pp. 177-190.

Connolly, Sean R., and Kosnik, Matthew A. (2013) Fossil record. In: Levin, Simon A., (ed.) Encyclopedia of Biodiversity. Encyclopedia of Biodiversity, 3 . Elsevier, Amsterdam, Netherlands, pp. 537-544.

Simpfendorfer, Colin A., and Heupel, Michelle R. (2012) Assessing habitat use and movement. In: Carrier, Jeffrey C., Musick, John A., and Heithaus, Michael R., (eds.) Biology of Sharks and Their Relatives. CRC Marine Biology Series . CRC Press, London, UK, pp. 579-601.

Bellwood, David R., Renema, Willem, and Rosen, Brian R. (2012) Biodiversity hotspots, evolution and coral reef biogeography: a review. In: Gower, David J., Johnson, Kenneth G., Richardson, James E., Rosen, Brian R., Rüber, Lukas, and Williams, Suzanne T., (eds.) Biotic Evolution and Environmental Change in Southeast Asia. The Systematics Association Special Volume Series, 82 . Cambridge University Press, New York, USA, pp. 216-245.

Hamilton, R.J., and Choat, J.H. (2012) Bumphead Parrotfish: Bolbometopon muricatum. In: Sadovy de Mitcheson, Yvonne, and Colin, Patrick L., (eds.) Reef Fish Spawning Aggregations: biology, research and management. Fish and Fisheries Series, 35 . Springer, Dordrecht, Netherlands, pp. 490-496.

Moorhead, Jonathan, and Knop, Daniel (2012) Ornamentals. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 583-605.

Zeng, Chaoshu, Cheng, Yongxu, Lucas, John S., and Southgate, Paul C. (2012) Other decapod crustaceans. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 514-540.

Choat, John Howard (2012) Spawning aggregations in reef fishes; ecological and evolutionary processes. In: Sadovy de Mitcheson, Yvonne, and Colin, Patrick L., (eds.) Reef Fish Spawning Aggregations: biology, research and management. Fish and Fisheries Series, 35 . Springer, Dordrecht, the Netherlands, pp. 85-116.

Munday, Philip L., Cheal, Alistair J., Graham, Nicholas A.J., Meekan, Mark, Pratchett, Morgan S., Sheaves, Marcus, Sweatman, Hugh, and Wilson, Shaun K. (2012) Tropical coastal fish. In: Ploczanska, E.S., Hobday, A.J., and Richardson, A.J., (eds.) A Marine Climate Change Impacts and Adaptation Report Card for Australia. CSIRO Marine and Atmospheric Research, Brisbane, QLD, Australia, pp. 281-306.

Leis, Jeffrey M., Van Herwerden, Lynne, and Patterson, Heather (2011) Estimating connectivity in marine fish populations: what works best? In: Gibson, R.N., Atkinson, R.J.A., and Gordon, J.D.M., (eds.) Oceanography and Marine Biology: An Annual Review. Oceanography and Marine Biology: An Annual Review, 49 . CRC Press, Boca Raton, FL, USA, pp. 193-234.

Connolly, Sean R., and Dornelas, Maria (2011) Fitting and empirical evaluation of models for species abundance distributions. In: Magurran, Anne E., and McGill, Brian J., (eds.) Biological diversity: frontiers in measurement and assessment. Oxford University Press, Oxford, UK, pp. 123-140.

Pickering, Timothy D., Ponia, Ben, Hair, Cathy A., Southgate, Paul C., Poloczanska, Elvira S., Della Patrona, Luc, Teitelbaum, Antoine, Mohan, Chadag V., Phillips, Michael J., Bell, Johann D., and De Silva, Sena (2011) Vulnerability of aquaculture in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 647-731.

Gehrke, Peter C., Sheaves, Marcus J., Terry, James P., Boseto, David T., Ellison, Joanna C., Figa, Boga S., and Wani, Jacob (2011) Vulnerability of freshwater and estuarine fish habitats in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 369-432.

Gehrke, Peter C., Sheaves, Marcus J., Boseto, David T., Figa, Boga S., and Wani, Jacob (2011) Vulnerability of freshwater and estuarine fisheries in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 577-646.

Waycott, Michelle, McKenzie, Len, Mellors, Jane E., Ellison, Joanna C., Sheaves, Marcus T., Collier, Catherine, Schwarz, Anne-Maree, Webb, Arthur, Johnson, Johanna E., and Payri, Claude E. (2011) Vulnerability of mangroves, seagrasses and intertidal flats in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 297-368.

Munday, P.L., Kuwamura, T., and Kroon, F.J. (2010) Bi-directional sex change in marine fishes. In: Cole, Kathleen S., (ed.) Reproduction and sexuality in marine fishes: patterns and processes. University of California Press, Berkeley, pp. 241-271.

de Nys, Rocky, Guenther, Jana, and Uriz, Maria (2010) Natural control of fouling in biofouling. In: Dürr, Simone, and Thomason, Jeremy C., (eds.) Biofouling. Wiley-Blackwell, UK, pp. 109-120.

Bell, Johann, Batty, Mike, Ganachaud, Alex, Gehrke, Peter, Hobday, Alistair, Hoegh-Guldberg, Ove, Johnson, Johanna, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice, Pickering, Tim, Pratchett, Morgan, Sheaves, Marcus, and Waycott, Michelle (2010) Preliminary assessment of the effects of climate change on fisheries and aquaculture in the Pacific. In: Gillett, Robert, (ed.) Fisheries in the Economies of the Pacific Island Countries and Territories. Pacific Studies Series . Asian Development Bank, Manila, Philippines, pp. 451-469.

de Nys, R., and Guenther, J. (2009) The impact and control of biofouling in marine finfish aquaculture. In: Hellio, Claire, and Yebra, Diego, (eds.) Advances in Marine Antifouling Coatings and Technologies. Woodhead Publishing, Cambridge,UK, pp. 177-221.

Pratchett, M.S., Wilson, S.K., Graham, N.A.J., Munday, P.L., Jones, G.P., and Polunin, N.V.C. (2009) Coral bleaching and consequences for motile reef organisms: past, present and uncertain future effects. In: van Oppen, M.J.H., and Lough, J.M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 205 . Springer, Germany, pp. 139-158.

Steicke, C.R., Jegatheesan, V., and Zeng, C. (2009) Recirculating aquaculture systems - a review. In: Vigneswaran, S., (ed.) Water and Wastewater Treatment Technologies. Encyclopedia of Life Support Systems , 1-2 . EOLSS, Oxford, UK, pp. 1-25.

Steneck, Robert H., Bustamante, Rodrigo H., Dayton, Paul K., Jones, Geoffrey P., and Hobday, Alistair J. (2008) Current status and future trends in kelp forest ecosystems. In: Polunin, Nicholas V.C., (ed.) Aquatic Ecosystems: trends and global prospects. Cambridge University Press, Cambridge, UK, pp. 226-241.

Chin, Andrew, Sweatman, Hugh, Forbes, Susan, Perks, Helen, Walker, Ryan, Jones, Geoff, Williamson, David, Evans, Richard, Hartley, Fraser, Armstrong, Shannon, Malcolm, Hamish, and Edgar, Graham (2008) 2008 Status of the coral reefs in Australia and Papua New Guinea. In: Wilkinson, Clive, (ed.) Status of Coral Reefs of the World: 2008. Global Coral Reef Monitoring Network, Townsville, QLD, Australia, pp. 159-176.

de Nys, Rocky, and Ison, Odette (2008) Biofouling. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 527-553.

Syms, C., and Kingsford, M.J. (2008) Coral reef habitats and assemblages. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 40-50.

Harvell, C.D., Woodley, C., Raymundo, L., and Sato, Y. (2008) Detecting and assessing outbreaks. In: Raymundo, Laurie J., Couch, Courtney S., and Harvell, C. Drew, (eds.) Coral Disease Handbook: guidelines for assessment monitoring and management. Coral Reef Targeted Research and Capacity Building for Management Program, pp. 65-74.

Southgate, Paul C., Strack, Elisabeth, Hart, Anthony, Wada, Katsuhiko T., Monteforte, Mario, Cariño , Micheline, Langy, Sandra, Lo, Cedrik, Acosta-Salmon, Hector, and Wang, Aimin (2008) Exploitation and culture of major commercial species. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 303-355.

Kingsford, M.J., Heimann, K., Alexander, C.G., and McKinnon, A.D. (2008) Plankton. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 129-144.

Wada, Katsuhiko T., and Jerry, Dean R. (2008) Population genetics and stock improvement. In: Southgate, Paul C., and Lucs, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 437-471.

Saucedo, Pedro E., and Southgate, Paul C. (2008) Reproduction, development and growth. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 131-186.

Raymundo, L., Work, T., Bruckner, A., and Willis, B. (2008) A decision tree for describing coral lesions in the field. In: Raymundo, Laurie J., Couch, Courtney S., and Harvell, C. Drew, (eds.) Coral Disease Handbook: guidelines for assessment monitoring and management. Coral Reef Targeted Research and Capacity Building for Management Program, St Lucia, QLD, Australia, pp. 17-32.

Choat, J.H., and Russell, B.C. (2008) The fish assemblages of the Great Barrier Reef: their diversity and origin. In: Hutchings, Pat , Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 327-342.

Montgomery, John C., and Carton, Alexander G. (2008) The senses of fish: chemosensory, visual and octavolateralis. In: Magnhagen, Carin, Braithwaite, Victoria A., Forsgren, Elisabet, and Kapoor, B.G., (eds.) Fish Behaviour. Science Publishers, New Hampshire, USA, pp. 3-31.

Sheaves, Marcus, Brodie, Jon, Brooke, Brendan, Dale, Pat, Lovelock, Catherine, Waycott, Michelle, Gehrke, Peter, Johnston, Ross, and Baker, Ronald (2007) Vulnerability of coastal and estuarine habitats in the GBR to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and the Australian Greenhouse Office, Townsville, QLD, Australia, pp. 593-620.

Munday, Philip L., Jones, Geoffrey P., Sheaves, Marcus, Williams, Ashley, and Goby, Gillian (2007) Vulnerability of fishes of the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and Australian Greenhouse Office, Townsville, QLD, Australia, pp. 357-391.

McCormick, Mark I. (2007) A little stress goes a long way: parental stress and population replenishment. In: Connell, Sean D., and Gillanders, Bronwyn M., (eds.) Marine Ecology. Oxford University Press, South Melbourne, VIC, Australia, p. 353.

de Nys, R., Givskov, M., Kumar, N., Kjelleberg, S., and Steinberg, P.D. (2006) Furanones. In: Fusetani, Nobuhiro, and Clare, Anthony S., (eds.) Antifouling Compounds. Progress in Molecular and Subcellular Biology . Springer, Heidelberg, Germany, pp. 55-86.

Moland, Even, Eagle, Janelle V., and Jones, Geoffrey P. (2005) Ecology and evolution of mimicry in coral reef fishes. In: Gibson, R.N., Atkinson, R.J.A., and Gordon, J.D.M., (eds.) Oceanography and Marine Biology: an annual review. Taylor & Francis, Boca Raton, FL, USA, pp. 455-482.

Bellwood, David , and Hoey, Andrew (2004) Feeding in Mesozoic fishes: a functional perspective. In: Arratia, Gloria, and Tintori, Andrea, (eds.) Mesozoic Fishes 3: systematics, paleoenvironments and biodiversity. Mesozoic Fishes, 3 . Verlag Dr. Friedrich Pfeil, Munchen, Germany, pp. 639-649.

Willis, Bette L., Page, Cathie A., and Dinsdale, Elizabeth A. (2004) Coral disease on the Great Barrier Reef. In: Rosenberg, Eugene, and Loya, Yossi, (eds.) Coral Health and Disease. Springer, Berlin, Germany, pp. 69-104.

Southgate, Paul C. (2003) Feeds and feed production. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 172-198.

Appleford, Peter, Lucas, John S., and Southgate, Paul (2003) General principles. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 11-46.

Southgate, Paul C., and Lucas, John S. (2003) Reproduction, life cycles and growth. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 111-122.

Choat, J. Howard, and Robertson, D. Ross (2002) Age-based studies. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 57-80.

Wainwright, Peter C., and Bellwood, David R. (2002) Ecomorphology of feeding in coral reef fishes. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 33-55.

Jones, Geoffrey P., and McCormick, Mark I. (2002) Numerical and energetic processes in the ecology of coral reef fishes. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 221-238.

Jones, Geoffrey P., Caley, M. Julian, and Munday, Philip L. (2002) Rarity in coral reef fish communities. In: Sale, Peter F., (ed.) Coral Reef Fishes: dynamics and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 81-101.

Leis, Jeffrey M., and McCormick, Mark I. (2002) The biology, behavior, and ecology of the pelagic, larval stage of coral reef fishes. In: Sale, Peter F., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 171-199.

Bellwood, David R., and Wainwright, Peter C. (2002) The history and biogeography of fishes on coral reefs. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 5-32.

Anthony, K.R.N., and Larcombe, P. (2002) Coral reefs in turbid waters: sediment-induced stresses in corals and likely mechanisms of adaptation. In: Moosa, M. Kasim, Soemodihardjo, Subagjo, Soegiarto, Aprilani, Romimohtarto, Kasijan, Nontji, Anugerah, Soekarno, and Suharsono, (eds.) Procedings of the 9th International Coral Reef Symposium. Ministery of Environment, Indonesian Institute of Sciences and International Society for Reef Studies, Bali, Indonesia, pp. 239-244.

Wainwright, Peter C., Westneat, Mark W., and Bellwood, David R. (2000) Linking feeding behaviour and jaw mechanics in fishes. In: Domenici, P., and Blake, R.W., (eds.) Biomechanics in Animal Behaviour. BIOS Scientific Publishers Ltd, pp. 207-221.

Syms, Craig, and Jones, Geoff (1998) Community assembly of fish on small patch reefs: direct vs indirect disturbance. In: Jones, G.P., Doherty, P.J., Mapstone, B.D., and Howlett, L., (eds.) ReeFish '95: recruitment and population dynamics of coral reef fishes. CRC Reef Research Centre, Townsville, QLD, Australia, pp. 238-251.

Barker, J.R., Crawford, C.M., Shelley, C.C., Braley, R.D., Lucas, J.S., Nash, W.J., and Lindsay, S. (1988) Ocean-nursery technology and production data for the giant clam Tridacna gigas. In: Copland, J.W., and Lucas, J.S., (eds.) Giant clams in Asia and the Pacific. ACIAR Monograph Series (9). Australian Centre for International Agricultural Research (ACIAR), Canberra, ACT, Australia, pp. 225-228.

Shelley, C.C., and Southgate, P.C. (1988) Reproductive periodicity and morphometry of Hippopus hippopus and Tridaca crocea. In: Copland, J.W., and Lucas, J.S., (eds.) Giant Clams in Asia and the Pacific. ACIAR Monograph Series, 9 . Australian Centre for International Agricultural Research, Canberra, ACT, Australia, pp. 86-88.

Report

Cohen, Philippa J., Tholan, Brittany, Dean-Fitz, Kama, Sisir, Pradhan, Solis Rivera, Vivienne, and Govan, Hugh (2024) Marine, Coastal and Shoreline Tenure. Report. Meridian Institute, USA.

Pradhan, S.K., Cohen, P.J., Lawless, S., and Fitz, Dean (2024) Pathways toward Equitable Climate Resilience, Sustainable Fisheries & Tenure Security: A Brief for Funders. Report. Meridian Institute, Washington, DC, USA.

Hoey, A.S., Burn, D., Chandler, J.F., Huertas, V., Cresswell, B.J., Galbraith, G.F., and McClure, E.C. (2023) Coral Sea Marine Park Coral Reef Health Survey 2023. Report. Parks Australia, Townsville, QLD, Australia.

Pearson, Richard G., Davis, Aaron M., and Birtles, R.Alastair (2022) The Burdekin River: a review of its ecology, conservation and management. Report. James Cook University, Townsville, Queensland.

Hoey, A.S., McClure, E.C., Burn, D., Chandler, J.F., Huertas Martin, V., Cresswell, B., Galbraith, G., and Pratchett, M.S. (2022) Coral Sea Marine Park Coral Reef Health Survey 2022. Report. Parks Australia, Townsville, QLD, Australia.

Galbraith, G., McClure, E.C., Barnett, A., Cresswell, B., Burn, D., Huertas Martin, V., Pratchett, M., and Hoey, A. (2022) Diving into The Deep: The Unique Habitats of The Coral Sea Marine Park. Report. Parks Australia, Townsville, QLD, Australia.

Nankervis, L., Barbero, G., Irving, A., Joyce, M., Pizzutto, M., Diedrich, A., and Condon, K. (2022) Future-proofing the NA aquaculture industry need for skilled staff to 2050. Report. CRC for Developing Northern Australia, Townsville.

Chaiechi, Taha, Gabriel, Jennifer, Esparon, Michelle, and Sievers, Katie (2022) Making Nature's Value Visible: Valuing the Contribution of Nature to Papua New Guinea's Economy and Livelihoods. Report. United Nations Development Programme, Port Moresby, Papua New Guinea.

Pratchett, Morgan S., Caballes, Ciemon F., Burn, Deborah, Doll, Peter C., Chandler, Josie F., Doyle, Jason R., and Uthicke, Sven (2022) Scooter-assisted large area diver-based (SALAD) visual surveys to test for renewed outbreaks of crown-of-thorns starfish (Acanthaster cf. solaris) in the northern Great Barrier Reef. Report. Australian Government.

Janssen, Annemie R., Badhe, Renuka, Bransome, Nicole C., Bricher, Phillippa, Cavanagh, Rachel, de Bruin, Taco, Elshout, Pjotr, Grant, Susie, Griffin, Eoghan, Grilly, Emily, Henley, Sian F., Hofmann, Eileen E., Johnston, Nadine M., Karentz, Deneb, Kent, Rhona, Lynnes, Amanda, Martin, Torge, Miloslavich, Patricia, Murphy, Eugena, Nolan, Joseph E., Sikes, Elisabeth, Sparrow, Michael, Tacoma, Marten, Williams, Michael J.M., Arata, Javier A., Bowman, Jeff, Corney, Stuart, Lau, Sally C.Y., Manno, Clara, Mohan, Rahul, Nielsen, Hanne, van Leeuwe, Maria A., Waller, Catherine, Xavier, José C., and Van De Putte, Anton P. (2022) Southern Ocean Action Plan (2021-2030) in support of the United Nations Decade of Ocean Science for Sustainable Development. Report. Zenodo, Brussels, Belgium.

Hoey, A.S., Harrison, H., McClure, E.C., Burn, D., Barnett, A., Cresswell, B., Doll, P.C., Galbraith, G., and Pratchett, M.S. (2021) Coral Sea Marine Park Coral Reef Health Survey 2021: Report on reef surveys February 2021. Report. Parks Australia, Townsville, QLD, Australia.

Dyer, M., Newlands, M., Bradshaw, E., and Hernandez, S. (2021) Stewardship for the Great Barrier Reef: a review of concepts and definitions of stewardship for the Great Barrier Reef. External Commissioned Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Murray, Nicholas J., Keith, David A., Tizard, Robert, Duncan, Adam, Hlaing, Nyan, Htut, Win Thuya, Oo, Aung Htat, Ya, Kyaw Zay, and Grantham, Hedley (2020) Threatened ecosystems of Myanmar. An IUCN Red List of ecosystems assessment. Version 1.0. Report. Wildlife Conservation Society, Randwick, NSW, Australia.

McLeod, Ian M., Bourne, David, Ceccarelli, Daniela M., Boström-Einarsson, Lisa, Cook, Nathan, Fulton, Stella E., Hancock, Boze, Harrison, Peter, Hein, Margaux, Le Port, Agnès, Paewai-Higgins, Roma, Smith, Hillary A., and Smith, Adam (2020) Best practice coral restoration for the Great Barrier Reef. Report. Reef and Rainforest Research Centre Limited (RRRC), Cairns, QLD, Australia.

Bishop, M.J., Murray, N.J., Swearer, S., and Keith, D.A. (2020) MT1.2 Muddy shorelines [In: IUCN Global Ecosystem Typology 2.0: descriptive profiles for biomes and ecosystem functional groups]. Report Section. International Union for Conservation of Nature and Natural Resources, Gland, Switzerland.

Cobcroft, Jennifer, Bell, Rob, Fitzgerald, Jessica, and Jerry, Dean (2020) Northern Australia aquaculture situational analysis. Report. CRCNA, Townsville, QLD, Australia.

Jones, Clive (2020) Research for development of lobster growout technology in Indonesia [Final report on ACIAR project FIS/2014/059]. Report. Australian Centre for International Agricultural Research, Canberra, ACT, Australia.

Marsh, H., Grech, A., Miller, R., and Collins, K. (2020) An assessment of the distribution and abundance of dugongs and large in-water turtles in Cleveland Bay and adjacent bays to provide baseline information for the Port of Townsville Channel Upgrade Project: a report for the Port of Townsville Limited. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McLeod, I. M., Newlands, M., Hein, M., Boström-Einarsson, L., Banaszak, A., Grimsditch, G., Mohammed, A., Mead, D., Pioch, S., Thornton, H., Shaver, E., Souter, D., and Staub, F. (2019) Mapping current and future priorities for coral restoration and adaptation programs. Report. International Coral Reef Initiative, Townsville, QLD, Australia.

Johnson, Johanna, Betram, Ian, Chin, Andrew, Moore, Bradley, Pratchett, Morgan, Welch, David, Williams, Ashley, Bell, Johann, and Govan, Hugh (2018) Effects of climate change on fish and shellfish relevant to Pacific Islands, and the coastal fisheries they support. Report. Centre for Environment, Fisheries and Aquaculture Science, Suffolk, UK.

Kingsford, Micheal, Pitt, Kylie, Llewellyn, Lyndon, O'Callaghan, Mark, Seymour, Jamie, and Richardson, Anthony (2016) Project 3.6: Establishing a research framework for future NESP investment into better understanding of the presence of box-jellyfishes (Irukandji) and risks in the Great Barrier Reef. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Welbergen, Justin, Meade, Jessica, Storlie, Collin, Vanderwal, Jeremy, Dalziell, Anastasia, Hodgson, Lauren, Krockenberger, Andrew, and Williams, Stephen (2015) Climate change and the impacts of extreme events on Australia's Wet Tropics biodiversity. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Robson, Heather, Basiita, Rose, Noble, Tansyn, Burrows, Damien, and Jerry, Dean (2015) Environmental DNA (eDNA) survey of Tilapia in northern NSW. Report. James Cook University, Townsville, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Basiita, Rose, Robson, Heather, and Burrows, Damien (2015) Environmental DNA (eDNA) survey of Tilapia infestations in the Moranbah/Isaac region. Report. James Cook University, Townsville, QLD, Australia.

Robson, Heather, Basiita, Rose, Noble, Tansyn, Burrows, Damien, and Jerry, Dean (2015) Environmental DNA (eDNA) survey of Tilapia on the mid coast (Geraldton region) of Western Australia. Report. James Cook University, Townsville, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2015) Environmental DNA (eDNA) survey of the Tilapia in the Cudgeon Region, NSW. Report. James Cook University, Cairns, QLD, Australia.

Jones, Clive, Huong, Le Lan, Tuan, Le Anh, Bahrawi, Samsul, and Irvin, Simon (2015) Spiny lobster aquaculture development in eastern Indonesia, Vietnam and Australia. Report. Australian Centre for International Agricultural Research (ACIAR), Canberra, ACT, Australia.

McCook, L., Schaffelke, B., Apte, S., Brinkman, R., Brodie, J., Erftemeijer, P., Eyre, B., Hoogerwerf, F., Irvine, I., Jones, R., King, B., Marsh, H., Masini, R., Morton, R., Pitcher, R., Rasheed, M., Sheaves, M., Symonds, A., and Warne, M.St.J. (2015) Synthesis of current knowledge of the biophysical impacts of dredging and disposal on the Great Barrier Reef: report of an Independent Panel of Experts. Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Noble, Tansyn, Robson, Heather, Saunders, Richard, and Jerry, Dean (2015) The utility of eDNA as a tilapia surveillance tool. Report. Invasive Animalc Cooperative Research Centre, Canberra, ACT, Australia.

Sheaves, Marcus, Dichmont, Cathy, Bustamante, Rodrigo, Dale, Patricia, Sporne, Ilva, Deng, Roy, Dutra, Leo, Van Putten, Ingrid, Savina-Rolland, Marie, Brians, Martha, and McLean, Nina (2014) Climate change adaptation strategies to support Australia's estuarine and coastal marine ecosystems. Report. Fisheries Research and Development Corporation, Deakin, Canberra, ACT.

Hilbert, David W., Hill, Rosemary, Moran, Catherine, Turton, Stephen M., Bohnet, Iris C., Marshall, Nadine A., Pert, Petina L., Stoeckl, Natalie, Murphy, Helen T., Reside, April E., Laurance, Susan G.W., Alamgir, Mohammed, Coles, Rob, Crowley, Gabriel, Curnock, Matt, Dale, Allan, Duke, Norman C., Esparon, Michelle, Farr, Marina, Gillet, Sarah, Gooch, Margaret, Fuentes, Mariana, Hamann, Mark, James, Cassandra S., Kroon, Frederieke J., Larson, Silva, Lyons, Pethie, Marsh, Helene, Meyer Steiger, Dagmar, Sheaves, Marcus, and Westcott, David (2014) Climate change issues and impacts in the Wet Tropics NRM cluster region. Report. James Cook University, Cairns, QLD, Australia.

Dichmont, Catherine M., Dutra, Leo X.C., van Putten, Ingrid, Deng, Roy, Owens, Randall, Jebreen, Eddie, Thompson, Carolyn, Pascual, Richardo, Warne, Michael, Quinn, Ross, Thébaud, Olivier, Bennett, John, Read, Mark, Wachenfeld, David, Davies, Julia, Garland, Anna, Dunning, Malcolm, Waycott, Michelle, Collier, Catherine, Dambacher, Jeffrey M., Playford, Julia, Harm, Rachel, Gribble, Neil, and Pitcher, Roland (2014) Design and implementation of management strategy evaluation for the Great Barrier Reef inshore (MSE-GBR). Report. Reef and Rainforest Research Centre, Cairns, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2014) Environmental DNA (eDNA) survey of Tilapia in the lower Pioneer catchment. Report. James Cook University, Townsville, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2014) Environmental DNA (eDNA) survey of Tilapia infestations in the Fitzroy River Basin. Report. James Cook University, Townsville, QLD, Australia.

Noble, Tansyn, Robson, Heather, Burrows, Damien, and Jerry, Dean (2014) Environmental DNA (eDNA) survey of the Tilapia in the Fitzroy Basin. Report. James Cook University, Townsville, QLD, Australia.

Zeng, Chaoshu, Thobejane, Tubake , and Nguyen, Thi Thu Thuy (2014) Improving feeds and feeding practices for the redclaw aquaculture industry. Report. Rural Industries Research and Development Corporation, Barton, ACT, Australia.

Hilbert, David W., Hill, Rosemary, Moran, Catherine, Turton, Steve M., Bohnet, Iris C., Marshall, Nadine A., Pert, Petina L., Stoeckl, Natalie, Murphy, Helen T., Reside, April E., Laurance, Susan G.W., Alamgir, Mohammed, Coles, Rob, Crowley, Gabriel, Curnock, Matthew, Dale, Allan, Duke, Norman C., Esparon, Michelle, Farr, Marina, Gillet, Sarah, Gooch, Margaret, Fuentes, Marianna, Hamann, Mark, James, Cassandra S., Kroon, Frederieke J., Larson, Silva, Lyons, Pethie, Marsh, Helene, Meyer Steiger, Dagmar, Sheaves, Marcus, and Westcott, David A. (2014) Key messages extracted from the Synthesis of Climate Change Issues and Impacts in the Wet Tropics NRM Cluster Region. Report. James Cook University, Cairns, QLD, Australia.

Creighton, Colin, Sawynok, Bill, Sutton, Stephen, D'Silva, Dallas, Stagles, Ian, Pam, Christine, Saunders, Richard, Welch, David, Grixti, Daniel, and Spooner, Daniel (2013) Climate Change and Recreational Fishing: implications of climate change for recreational fishers and the recreational fishing industry. Report. Fisheries Reserach and Development Corporation, Canberra, ACT.

Jerry R., Dean, Smith-Keune, Carolyn, Hodgson, Lauren, Pirozzi, Igor, Carton, A. Guy, Hutson, Kate S., Brazenor, Alexander K., Trujillo Gonzalez, Alejandro, Gamble, Stephen, Collins, Geoff, and Vanderwal, Jeremy (2013) Vulnerability of an Iconic Australian Finfish (Barramundi - Lates calcarifer) and Aligned Industries to Climate Change across Tropical Australia. Report. Fisheries Research and Development Corporation, Douglas, QLD, Australia.

Welch, D.J., Ovenden, J., Simpfendorfer, C., Tobin, A., Morgan, J.A.T., Street, R., White, J., Harry, A., Schroeder, R., and Macbeth, W.G. (2011) Stock structure of exploited shark species in north-eastern Australia. Report to the Fisheries Research & Development Corporation, Project 2007/035. Fishing & Fisheries Research Centre Technical Report No. 12. Report. Fisheries Research and Development Corporation, James Cook University, Townsville, QLD, Australia.

Welch, D.J., Ballagh, A., Newman, S.J., Lester, R.J., Moore, B., van Herwerden, L., Horne, J., Allsop, Q., Saunders, T., Stapley, J., and Gribble, N.A. (2010) Defining the Stock Structure of Northern Australia's Threadfin Salmon Species. Report. James Cook University, Townsville, QLD, Australia.

Booth, Mark A., Pirozzi, Igor, Allan, Geoff L., and Fielder, D. Stewart (2010) Aquafin CRC Project 1B5: Feed Technology for Temperate f\Fish Species. Volume 2: Diet Development. Report. Industry and Investment NSW, NSW, Australia.

Tobin, A., Schlaff, A., Tobin, R., Penny, A., Ayling, Anthony, Krause, B., Welch, D., Sutton, S., Sawynok, B., Marshall, N., Marshall, P., and Maynard, J. (2010) Adapting to Change: Minimising Uncertainty about the Effects of Rapidly-Changing Environmental Conditions on the Queensland Coral Reef Fin Fish Fishery. Report. Fishing and Fisheries Research Centre, James Cook University, Townsville, Qld, Australia.

Tobin, R.C., Sutton, S.G., Penny, A., Williams, L., Maroske, J., and Nilsson, J. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part A: Commercial Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD. Australia.

Tobin, R.C., Beggs, K., Sutton, S.G., Penny, A., Maroske, J., and Williams, L. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part B: Charter Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.

Tobin, R.C., Beggs, K., Sutton, S.G., and Penny, A. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part C: Recreational Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.

Tobin, R.C., Beggs, K., Sutton, S.G., and Penny, A. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part D: Seafood Consumers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Hoegh-Guldberg, Ove, Hoegh-Guldberg, Hans, Veron, John E., Green, Alison, Gomez, Edgardo D., Lough, Janice, King, Melanie, Ambariyanto , Dr., Hansen, Lara, Cinner, Josh, Dews, Geoff, Russ, Garry, Schuttenberg, Heidi Z., Peñaflor, Eileen L., Eakin, C. Mark, Christensen, Tyler R.L., Abbey, Michael, Areki, Francis, Kosako, Rosemary A., Tewfik, Alexander , and Oliver, Jamie (2009) The Coral Triangle and Climate Change: ecosystems, people and societies at risk. Report. WWF Australia, Sydney, NSW, Australia.

Welch, D.J., Buckworth, R.C., Ovenden, J.R., Newman, S.J., Broderick, D., Lester, R.J.G., Ballagh, A.C., Stapley, J., Charters, R.A., and Gribble, N.A. (2009) Determination of management units for grey mackerel fisheries in northern Australia. Report. James Cook University, Townsville, Queensland, Australia.

Green, Alison L., and Bellwood, David R. (2009) Monitoring Functional Groups of Herbivorous Reef Fishes as Indicators of Coral Reef Resilience: a practical guide for coral reef managers in the Asia Pacific Region. Manual. The International Union for the Conservation of Nature and Natural Resources, Gland, Switzerland.

Frisch, Ashley J., and Hobbs, Jean-Paul A. (2009) Rapid assessment of anemone and anemonefish populations at the Keppel Islands [electronic resource]: a report to the Great Barrier Reef Marine Park Authority. Report. Great Barrier Reef Marine Park Authority, Australia.

Brown, I.W., Sumpton, W.D., McLennan, M., Welch, D.J., Kirkwood, J., Butcher, A., Mapleston, A., Mayer, D., Begg, G., Campbell, M., Halliday, I., and Sawynok, W. (2008) National Strategy for the Survival of Released Line-Caught Fish: tropical reef species (FRDC 2003/019). Report. Department of Primary Industries and Fisheries.

Heupel, M.R., Williams, A.J., Welch, D.J., Mapstone, B.D., Ballagh, A., and Simpfendorfer, C.A. (2008) Compilation of information on the interaction of reef sharks with the reef line fishery in the Great Barrier Reef Marine Park: final report to the Great Barrier Reef Marine Park Authority. Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Anthony, Shelley L., and Thomas, Séverine (2008) Coral Husbandry and Long-Term Coral Survival in the Coral Reef Exhibit at Reef HQ Aquarium, Townsville, Australia. Report. Burgers' Zoo, Arnhem, Netherlands.

Thomas, Séverine, and Anthony, Shelley L. (2008) The Coral Reef Exhibit at Reef HQ Aquarium, Townsville, Australia, Technical Operations and Water Quality. Report. Burgers' Zoo, Arnhem, Netherlands.

Ceccarelli, D., Choat, J.H., Ayling, A., Richards, Z.T., Van Herwerden, L., Ewel, G.D., Hobbs, J-P., and Cuff, B. (2008) Coringa-Herald National Nature Reserve Marine Survey 2007. Report. Department of the Environment, Water, Heritage and the Arts, Canberra, ACT, Australia.

Sheaves, Marcus, Collins, John, Houston, Wayne, Dale, Pat, Revill, Andrew, Johnston, Ross, and Abrantes, Katya (2006) Contribution of floodplain wetland pools to the ecological functioning of the Fitzroy River Estuary. Report. Cooperative Research Centre for Coastal Zone, Estuary and Waterway Management, Brisbane, QLD, Australia.

Tobin, R.C., Pears, R., Marshall, N., Marriott, R., Busilacchi, S., and Bergenius, M.A.J. (2005) Fishing for More: a student-stakeholder workshop on the biology, ecology, sociology and economics of fisheries. Report. CRC Reef Research Centre , Townsville, QLD, Australia.

Sheaves, Marcus, Connolly, Rod, and Johnston, Ross (2007) Assessment of Techniques for Determining the Health of Tropical Estuarine Ecosystems. Report. Marine and Tropical Sciences Research Facility, Cairns. (Unpublished)

Conference Item

Hermanto, B., Bourne, D.G., and Smith, H. (2023) Comparative image analysis approaches to assess ecological effects of macroalgal removal on inshore reefs of Magnetic Island, Australia. In: IOP Conference Series: Earth and Environmental Science (1137) 012052. From: MarBioUtiCoM: International Seminar on Marine Biodiversity, Utilization, Conservation and Management, 8-9 August 2022, Online.

Sahidhir, Ibnu, Syahrul, Syafrizal, Dewiyanti, Irma, Jones, Clive M., and Rimmer, Michael A. (2023) Feeding management and appraisal of recirculating aquaculture system for spiny lobster Panulirus spp. weaning. In: E3S Web of Conferences (442) 02020. From: ISFFS 2023: 2nd International Seminar on Fish and Fisheries Sciences, 6-7 June 2023, Denpasar-Bali, Indonesia.

Konovalov, Dmitry A., Swinhoe, Natalie, Efremova, Dina B., Birtles, R. Alastair, Kusetic, Martha, Adams, Kent, Hillcoat, Suzanne, Curnock, Matthew I., Williams, Genevieve, Sobtzick, Susan, and Sheaves, Marcus (2020) Minke whale detection in underwater imagery using classification CNNs. In: Proceedings of Global Oceans 2020. From: Global Oceans 2020: Singapore – U.S. Gulf Coast, 5-30 October 2020, Biloxi, MS, USA.

Konovalov, Dmitry A., Saleh, Alzayat, Efremova, Dina B., Domingos, Jose A., and Jerry, Dean R. (2019) Automatic weight estimation of harvested fish from images. In: Proceedings of the International Conference on Digital Image Computing. pp. 308-314. From: DICTA 2019: International Conference on Digital Image Computing: Techniques and Applications, 2-4 December 2019, Perth, WA, Australia.

Marc, A., Guppy, J., Jerry, D., Mulvey, P., Bauer, P., and Paris, D. (2019) Evaluating barramundi (Lates calcarifer) sperm quality using high throughput advanced reproductive tools. In: [Abstracts from Aquaculture Europe]. From: Aquaculture Europe 19, 8-10 October 2019, Berlin, Germany.

Lapico, Adrian, Sankupellay, Mangalam, Cianciullo, Louis, Myers, Trina, Konovalov, Dmitry A., Jerry, Dean R., Toole, Preston, Jones, David B., and Zenger, Kyall R. (2019) Using image processing to automatically measure pearl oyster size for selective breeding. In: Proceedings of the International Conference on Digital Image Computing. pp. 90-97. From: DICTA 2019: International Conference on Digital Image Computing: Techniques and Applications, 2-4 December 2019, Perth, WA, Australia.

Konovalov, D.A., Domingos, J.A., White, R.D., and Jerry, D.R. (2018) Automatic scaling of fish images. In: Proceedings of the 2nd International Conference on Advances in Image Processing. pp. 48-53. From: ICAIP 18: 2nd International Conference on Advances in Image Processing, 16-18 June 2018, Chengdu, China.

Shiel, Brett P., Cooke, Ira R., Hall, Nathan E., Robinson, Nicholas A., and Strugnell, Jan M. (2018) Summer mortality in molluscs: the genetic basis for resilience and susceptibility. In: Breeding Focus 2018. pp. 59-79. From: Breeding Focus 2018: reducing heat stress, 19-20 September 2018, Armidale, NSW, Australia.

Konovalov, D.A., Domingos, J.A., Bajema, C., White, R.D., and Jerry, D.R. (2017) Ruler detection for automatic scaling of fish images. In: Proceedings of the International Conference on Advances in Image Processing. pp. 90-95. From: ICAIP 2017: International Conference on Advances in Image Processing, 25-27 August 2017, Bangkok, Thailand.

Khatkar, M.S., Zenger, K.R., Jones, D.B., Prochaska, Jeff, van der Steen, H.A.M., Jerry, D.R., and Raadsma, H.W. (2017) Quantitative genomic analyses in the pacific whiteleg shrimp litopenaeus vannamei. In: Proceedings of the Conference of the Association for the Advancement of Animal Breeding and Genetics (22) pp. 121-124. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Khatkar, M.S., Jones, D.B., Toole, P.B., Raadsma, H.W., Jerry, D.R., and Zenger, K.R. (2017) Reconstruction of unknown donor genome from chimeric pearl sac tissue and host genotypes in pinctada maxima. In: Proceedings of the Association for the Advancement of Animal Breeding and Genetics. pp. 445-448. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Zenger, K.R., Khatkar, M.S., Jerry, D.R., and Raadsma, H.W. (2017) The next wave in selective breeding: implementing genomic selection in aquaculture. In: Proceedings of the Conference of the Association for the Advancement of Animal Breeding and Genetics. pp. 105-112. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Jones, D.B., Toole, P.B., Khatkar, M.S., Raadsma, H.W., Jerry, D.R., and Zenger, K.R. (2017) Developing a genomic selection breeding program for complex pearl colour traits within the silver-lipped pearl oyster. In: Proceedings of the Conference of the Association for the Advancement of Animal Breeding and Genetics. pp. 537-540. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Jones, D.B., Zenger, K.R., Khatkar, M.S., Raadsma, H.W., van der Steen, H.A.M., Prochaska, J., Fôret, S., and Jerry, D.R. (2017) Development of a low density commercial genotyping array for the white legged shrimp, Litopenaeus vannamei. In: Proceedings of the Conference of the Association for the Advancement of Animal Breeding and Genetics. pp. 117-120. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Boynton, Rebekah, Swinbourne, Anne, McShane, Connar, and Sheaves, Marcus (2016) Promoting resilience in regional Australian industries: a case study of the North Queensland commercial fishing industry. In: [Presented at the Australian Regional Development Conference 2016]. From: Australian Regional Development Conference 2016, 5-6 September 2016, Canberra, ACT, 2016.

Shein, Karsten, Loder, Jennifer, Bourne, David G., and Galvis, Nohora (2016) Citizen Science: the next big leap. In: Proceedings of the 13th International Coral Reef Symposium. pp. 590-598. From: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Hixon, M.A., Cinner, J.E., Feary, D.A., Green, A.L., Hamilton, R.J., Jones, Geoff, and Jupiter, S.D. (2016) Reef fish ecology, conservaton, and fisheries: the scientific legacy of Glenn Almany. In: Proceedings of the 13th International Coral Reef Symposium. 20. pp. 159-168. From: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Jones, Clive M. (2015) Spiny lobster aquaculture development in Indonesia, Vietnam and Australia. In: ACIAR Proceedings (145) From: International Lobster Aquaculture Symposium, 22-25 April 2014, Lombok, Indonesia.

Heimann, Kirsten, and Huerlimann, Roger (2015) The benefits and advantages of commercial algal biomass harvesting. In: Proceedings of the Biosafety and the Environmental Uses of Micro-Organisms Conference. pp. 73-92. From: OECD Conference on the Environmental Uses of Micro-organisms, 26-27 March 2012, Paris, France.

Berner, Florian, Heimann, Kirsten, and Sheehan, Madoc (2015) A perfused membrane biofilm reactor for microalgae cultivation in tropical conditions. In: Proceedings of the 16th Asia Pacific Confederation of Chemical Engineering Congress (2015) 3133047. pp. 291-301. From: APCChE 2015: 16th Asia Pacific Confederation of Chemical Engineering Congress, 27 September - 1 October 2015, Melbourne, VIC, Australia.

Razaghi, Ali, Kartik, Obulisamy, Owens, Leigh, and Heimann, Kirsten (2014) Methane oxidation by the oleaginous yeast, Rhodotorula glutinis – fact or fiction? In: [Presented at the North Queensland Festival of Life Sciences 2014]. From: North Queensland Festival of Life Sciences 2014, 5 November 2014, Townsville, QLD, Australia.

Islam, Muhammad Aminul, Brown, Richard, Dowell, Ashley, Eickhoff, Wilhelm, Heimann, Kirsten, von Alvensleben, Nicolas, and Brookes, Peter (2014) Evaluation of a pilot-scale oil extraction from microalgae for biodiesel production. In: Journal of Environmental Science (3) From: ICERE 2014: International Conference on Environment and Renewable Energy, 7-8 May 2014, Paris, France.

Goopy, J.P., deNys, R., Callaghan, M., and Parker, A. (2013) Vitamin A status of heifers fed a diet deficient in Beta Carotene. In: Proceedings of the Northern Beef Research Update Conference. p. 168. From: Northern Beef Research Update Conference , 12-15 August 2013, Cairns, QLD, Australia.

Zhu, Youjian, Ashman, Peter J., Wang, Dingbiao, Kwong, Philip, and De Nys, Rocky (2013) Devolatilization characteristics of Oedogonium sp., Loy Yang coal and their blends using thermogravimetric analysis. In: Proceedings of the Australian Combustion Symposium. pp. 250-253. From: Australian Combustion Symposium, 6-8 November 2013, Perth, Western Australia.

Hair, Cathy A., Pickering, Timothy D., and Mills, David J. (2012) Asia-Pacific Tropical Sea Cucumber Aquaculture: proceedings of an International Symposium held in Noumea, New Caledonia, 15-17 February, 2011. In: ACIAR Proceedings (136) pp. 1-209. From: Asia–Pacific Tropical Sea Cucumber Aquaculture, 15-17 February 2011, Noumea, New Caledonia.

Heron, Scott F., Maynard, Jeffrey, Willis, Bette, Christensen, Tyler, Harvell, C Drew, Vargas-Angel, Bernardo, Beeden, Roger, Sziklay, Jamie, Aeby, Greta, Franklin, Eric C., Skirving, William, Eakin, C. Mark, Burgess, Tim, Li, Jianke, Liu, Gang, Lucas, Ethan, Rauenzahn, Jackqueline, and Strong, Al (2012) Developments in understanding relationships between environmental conditions and coral disease. In: Proceedings of the 12th International Coral Reef Symposium. 16B_4. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Da Silva, Eduardo, Alvarez Romero, Jorge G., Waterhouse, Jane, and McKenzie, Len (2012) Extreme weather conditions in the Great Barrier Reef: drivers of change? In: Proceedings of the 12th International Coral Reef Symposium. 21A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Tan, James C.H., Pratchett, Morgan S., Bay, Line K., and Baird, Andrew H. (2012) Massive coral mortality following a large flood event. In: Proceedings of the 12th International Coral Reef Symposium. 11E_1. pp. 1-4. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Pereira, Pedro H.C., Feitosa, João L.L., Chaves, Laís C.T., and de Araújo, Maria E. (2012) Reef fish foraging associations: "nuclear-follower" behavior or an ephemeral interaction? In: Proceedings of the 12th International Coral Reef Symposium. 13B_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Rocker, Melissa M., Willis, Bette L., and Bay, Line K. (2012) Thermal stress-related gene expression in corals with different Symbiodinium types. In: Proceedings of the 12th International Coral Reef Symposium. 9A_12. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Heupel, Michelle R., and Webber, Dale M. (2012) Trends in acoustic tracking: where are the fish going and how will we follow them? In: American Fisheries Society Symposium (76) pp. 219-231. From: American Fisheries Society Symposium 76: advances in fish tagging and marketing technology, 24-28 February 2008, Auckland, NZL.

Horne, John B., Van Herwerden, Lynne, and Choat, J. Howard (2011) Just because the shoe fits doesn't mean you should wear it: complex evolutionary patterns in the reef fish genus Naso. In: Abstracts from Society for Integrative and Comparative Biology Annual Meeting. p. 1. From: Society for Integrative and Comparative Biology Annual Meeting, 3-7 January 2011, Salt Lake City, UT, USA.

McCormick, M.I., and Gagliano, M. (2009) Carry-over effects - the importance of a good start. In: Proceedings of the 11th International Coral Reef Symposium, Ft. Lauderdale, Florida, July 2008. From: 11th International Coral Reef Symposium 2008, 07 July - 11 July 2008, Fort Lauderdale, FL, USA.

Weeks, Rebecca, Russ, Garry R., Alcala, Angel C., and White, Alan T. (2009) Community-based MPAs: their contribution towards achieving regional-scale conservation targets in the Philippines. In: Proceedings of the International Marine Conservation Congress Annual Convention. From: International Marine Conservation Congress Annual Convention, 17-24 May 2009, Washington, DC, USA.

Coker, D.J., Pratchett, M.S., and Munday, P.L. (2009) Does body colouration influence predation risk of coral dwelling reef fish in bleached landscapes? In: Proceedings of the 11th Coral Reef Symposium. pp. 1281-1285. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Steicke, C., Jegatheesan, V., and Zeng, C. (2009) Performance of a recirculating tank-based system utilizing floating and submerged filters with a denitrification column for the culture of barramundi (Lates calcarifer). In: Proceedings of the Fourth International Symposium on Southeast Asian Water Environment (4) pp. 253-260. From: Fourth International Symposium on Southeast Asian Water Environment, 6-8 December 2006, Bangkok, Thailand.

Carter, Alexandra, Williams, Ashley, Russ, Garry, and Tobin, Andrew (2009) The effects of no-take zoning, region and year on reproductive output of the common coral trout, Plectropomus leopardus. In: Proceedings of the International Marine Conservation Congress Annual Convention. From: International Marine Conservation Congress Annual Convention, 17-24 May 2009, Washington, DC, USA.

Cetina-Heredia, P., and Michael, H. (2008) Modelling physical processes driving larval transport in reef systems. In: Proceedings of the Western Pacific Geophysics Meeting (89) OS25E-12. From: 2008 Western Pacific Geophysics Meeting, 29 July - 1 August 2008, Cairns, QLD, Australia.

Bondarenko, Olga, Kininmonth, Stuart, and Kingsford, Michael (2007) Underwater sensor networks, oceanography and plankton assemblages. In: Proceedings of the 2007 International Conference on Intelligent Sensors, Sensor Networks and Information Processing . pp. 657-662. From: International Conference on Intelligent Sensors, Sensor Networks and Information Processing (ISSNIP) 2007, 3-6 December 2007, Melbourne, Vic, Australia.

Salih, Anya, Cox, Guy, Szymczak, Ron, Coles, Steve, Baird, Andrew, Dunstan, Andy, Cocco, Giordana, Mills, Jacqui, and Larkum, Anthony (2006) The role of host-based color and fluorescent pigments in photoprotection and in reducing bleaching stress in corals. In: Proceedings of 10th International Coral Reef Symposium. pp. 746-756. From: 10th International Coral Reef Symposium, 28 June - 2 July, 2004, Okinawa, Japan.

McCormick, Mark I., and Hoey, Andrew S. (2006) Biological and physical correlates of settlement and survival for a coral reef fish, Pomacentrus amboinensis (Pomacentridae). In: Proceedings of the 10th International Coral Reef Symposium. pp. 425-430. From: 10th International Coral Reef Symposium, 28 June -2 July 2004, Okinawa Convention Center, Okinawa, Japan.

Hoey, Andrew S., and McCormick, Mark I. (2006) Effects of subcutaneous fluorescent tags on the growth and survival of a newly settled coral reef fish, Pomacentrus amboiensis (Pomacentridae). In: Proceedings of 10th International Coral Reef Symposium. pp. 420-424. From: 10th International Coral Reef Symposium, 28 June-2 July 2004, Okinawa Convention Center, Okinawa, Japan.

Liddelow, Megan J., and Kingsford, Michael J. (2006) The attraction of presettlement reef fish to FADs with live and dead coral. In: Proceedings of the 10th International Coral Reef Symposium. pp. 403-408. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa, Japan.

Beger, Maria, Jones, Geoffrey P., and Possingham, Hugh P. (2006) A method of statistical modelling of coral reef fish distribution: can it aid conservation planning in data poor regions? In: Proceedings of the 10th International Coral Reef Symposium. pp. 1445-1456. From: 10th International Coral Reef Symposium, 28 June-2 July 2004, Okinawa, Japan.

Preite, C.K., Pearson, R.G., Heimann, K., and Burrows, D.W. (2005) Algal dynamics in tropical riverine water holes. In: Phycologia (44) p. 83. From: Conference, 13-19 August 2005, Durban, South Africa.

Wolstenholme, Jacqueline K. (2003) Temporal reproductive isolation and gametic compatibility are evolutionary mechanisms in the Acropora humilis species group. In: Australian Coral Reef Society Annual Meeting. p. 68. From: Understanding and protecting coral reefs, 26-29 September, 2003, Townsville, QLD, Australia.

Blanco-Martin, B. (2002) Influence of larval competence periods on coral larval settlement and reef connectivity: a modelling approach. In: Proceedings of the 9th International Coral Reef Symposium (1) pp. 57-62. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Baird, A.H., Marshall, P.A., and Wolstenholme, J. (2002) Latitudinal variation in the reproduction of Acropora in the Coral Sea. In: Proceedings of the Ninth International Coral Reef Symposium (1) pp. 385-390. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia.

Wallace, C.C., Paulay, G., Hoeksema, B.W., Bellwood, D.R., Hutchings, P.A., Barber, P.H., Erdmann, M., and Wolstenholme, J. (2002) Nature and origins of unique high diversity reef faunas in the Bay of Tomini, Central Sulawesi: the ultimate 'centre of diversity’? In: Proceedings of the Ninth International Coral Reef Symposium (1) pp. 185-192. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia.

Alcala, C., and Russ, G.R. (2002) Role of socioeconomic factors in coral reef protection and management. In: Proceedings of the 9th International Coral Reef Symposium (1) pp. 29-32. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Marquez, L.M., Mackenzie, J.B., Takabayashi, M., Smith, C.R., and Chen, C.A. (2000) Difficulties in obtaining microsatellites from acroporid corals. In: Proceedings of the 9th International Coral Reef Symposium (1) pp. 139-143. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Sin, T.M., and Lee, A.C. (2000) Host specialisation in trapeziid crabs: consequences for rarity at local scales. In: Proceedings of the 9th International Coral Reef Symposium (1) pp. 533-536. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Hughes, T.P., Cornell, H.V., Caley, M.J., Karlson, R.H., Wallace, C.C., and Wolstenholme, J. (2000) Local and regional patterns in the community structure of corals. In: Abstracts of the Ninth International Coral Reef Symposium. p. 5. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

McClanahan, T.R., Arthur, R., Kaunda-Arara, B., Kiambo, R., Machano, H., Mangi, S., Muthiga, N., and Rodrigues, M. (2000) Sea urchin reduction as a restoration technique in a new marine park. In: Proceedings of the 9th International Coral Reef Symposium (2) pp. 947-953. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Lukoschek, V., and McCormick, M.I. (2000) A review of multi-species foraging associations in fishes and their ecological significance. In: Proceedings of the 9th International Coral Reef Symposium (1) pp. 467-474. From: 9th International Coral Reef Symposium: World Coral Reefs in the New Millenium, 23-27 October 2000, Bali, Indonesia.

Wolstenholme, Jackie (1999) Species boundaries in scleractinian corals a morphometric analysis. In: Papers from Australian Coral Reef Society Scientific Conference. p. 62. From: Australian Coral Reef Society Scientific Conference, 3-6 September, 1999, South Molle Island, QLD, Australia.

Wallace, Carden, Wolstenholme, Jackie, and True, James (1999) Staghorn corals of the world: an identification key and photo library for species of Acropora. In: Australian Coral Reef Society Scientific Conference. p. 59. From: Australian Coral Reef Society Scientific Conference, 3-6 September 1999, South Molle Island.

Wolstenholme, Jacqueline, Dinesen, Zena, and Alderslade, Phil (1998) Hard corals of the Darwin Region, Northern Territory. In: Papers from Australian Coral Reef Society Scientific Conference. p. 53. From: Australian Coral Reef Society Scientific Conference, 16-19 October, 1998, Port Douglas, QLD, Australia.

Baird, A.H., and Hughes, T.P. (1997) Spatial variation in coral recruitment around Lizard Island, Australia. In: Proceedings of the International Coral Reef Symposium (2) pp. 1207-1210. From: 8th International Coral Reef Symposium, June 24-29 1996, Panama.

Musso, Barbara M. (1993) Effects of Acanthaster predation on bioerosion: design and preliminary results. In: Papers from Workshop Series No 18: the possible causes and consequences of outbreaks of the crown-of-thorns starfish (18) pp. 133-144. From: Workshop Series No 18 : the possible causes and consequences of outbreaks of the crown-of-thorns starfish, 10 June 1992, Townsville, QLD, Australia.

Musso, B.M. (1993) Rates of skeletal degradation following death in three species of Acropora. In: Proceedings of the 7th International Coral Reef Symposium (1) pp. 414-419. From: 7th International Coral Reef Symposium, 22-27 June 1992, University of Guam, Mangilao, Guam.

Wolstenholme, J. (1993) Reproductive biology and early life history stages of the Scleractinian coral, Tubastrea faulkneri. In: Abstracts of the Australian Coral Reef Society Annual Conference. From: Annual Australian Coral Reef Society Conference, July 1993, Brisbane, QLD, Australia.

McCormick, Mark, and Shand, Julia (1992) Metamorphosis of the visual and barbel sensory systems at settlement in the reef fish Upeneus tragula (Family Mullidae). In: Proceedings of the 7th International Coral Reef Symposium (1) pp. 616-623. From: 7th International Coral Reef Symposium, 22-27 June 1992, The University of Guam, Mangilao, GU.

Sutton, D.C., and Clements, K.D. (1988) Aerobic, heterotrophic gastrointestinal microflora of tropical marine fishes. In: Proceedings of the 6th International Coral Reef Symposium (3) pp. 185-190. From: 6th International Coral Reef Symposium, 8-12 August 1988, Townsville, QLD, Australia.

Willis, B.L., Babcock, R.C., Harrison, P.L., Oliver, J.K, and Wallace, C.C. (1985) Patterns in the mass spawning of corals on the Great Barrier Reef from 1981 to 1984. In: Proceedings of the Fifth International Coral Reef Congress. pp. 343-348. From: Fifth International Coral Reef Congress, 27 May - 1 June 1985, Tahiti, French Polynesia.

Heimann, Kirsten, Karthikeyan, Obulisamy Parthiba, Karthigeyan, C.P., and Cirés, Samuel (2013) A biotechnological approach to convert methane into bio-polymer. In: Posters from the Greenhouse 2013 Conference . From: Greenhouse 2013 Conference, 8-11 October 2013, Adelaide, SA, Australia. (Unpublished)

Heimann, Kirsten, Karthikayan, O. Parthiba, and Cirés, Samuel (2013) A biotechnological approach to mitigate green house gas emissions from coal mine ventilation air in Australia. In: UNSPECIFIED. . From: ICTW 2013: 1st International Conference on Technologies for Sustainable Waste Management in Developing Countries, 23-24 August 2013, Guntur, India. (Unpublished)

Cires, S., Alvarez Roa, C., Loza, V., Karthikeyan, O.P., and Heimann, K. (2013) Diazotrophic cyanobacteria for bioremediation of greenhouse gases in Australian coal mines: a promising source of biofuels and value-added products. In: UNSPECIFIED. From: 3rd International Conference on Algal Biomass, Biofuels and Bioproducts, 16-19 June 2013, Toronto, Canada. (Unpublished)

Nelson, P.N., Banabas, M., Webb, M.J., Sheaves, M., Huth, N., McNeill, A., Koczberski, G., Berthelsen, S., and Orrell, I. (2010) Environmental sustainability indicators for oil palm in Papua New Guinea – conceptual framework for a research and development project. In: Agri-environmental Indicators Workshop, associated with the 2nd International Conference on Oil Palm and the Environment (ICOPE). From: Agri-environmental Indicators Workshop, associated with the 2nd International Conference on Oil Palm and the Environment (ICOPE), 23-27 February 2010, Bali, Indonesia. (Unpublished)

Wolstenholme, Jacqueline K. (2004) Analysis of intraspecific and interspecific variation using reproductive and molecular evidence to interpret evolutionary relationships in a scleractinian coral species complex. In: 10th International Coral Reef Symposium. p. 141. From: 10th International Coral Reef Symposium Abstracts: stability and degradation of coral reef ecosystems, 28 June - 2 July 2004, Okinawa, Japan. (Unpublished)

Wei, Nu-Wei V., Wallace, Carden C., Lin, Ho-I, Wolstenholme, Jackie, Dai, Chang-Feng, and Chen, Chaolun A. (2004) Evaluation of molecular makers for species phylogeny of genus Acropora (Cnidaria; Scleractinia; Acroporidae). In: 10th International Coral Reef Symposium. p. 141. From: 10th International Coral Reef Symposium Abstracts: stability and degradation of coral reef ecosystems, 28 June - 2 July 2004, Okinawa, Japan. (Unpublished)

Baird, A., Marshall, Paul, and Wolstenholme, Jackie (2000) Mass spawning of Acropora in the coral sea. In: Abstracts of the Ninth International Coral Reef Symposium. p. 95. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia. (Unpublished)

Wallace, C.C., Paulay, G., Hoeksema, B.W.H., Bellwood, D.R., Hutchings, P., Barber, P.H., Erdmann, M., and Wolstenholme, J. (2000) Nature and origins of unique high diversity reef faunas in the Bay of Tomini, Central Sulawesi: the ultimate "Centre of Diversity"? In: Abstracts of the Ninth International Coral Reef Symposium. p. 46. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia. (Unpublished)

Book

Wolanski, Eric, and Kingsford, Michael J. (2024) Oceanographic Processes of Coral Reefs: Physical and Biological Links in the Great Barrier Reef. CRC Press, Boca Raton, FL, USA.

Hutchings, Pat, Kingsford, Micheal, and Hoegh-Guldberg, Ove (2019) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Clayton South, VIC, Australia.

Carrier, Jeffrey C., Heithaus, Michael R., and Simpfendorfer, Colin A. (2018) Shark Research: emerging technologies and applications for the field and laboratory. Marine Biology Series . CRC Press, Boca Raton, FL, USA.

Nelson, Paul N., Webb, Michael J., Orrell, Ian, van Rees, Harm, Banabas, Murom, Berthelsen, Suzanne, Sheaves, Marcus, Bakani, Felix, Pukam, Otto, Hoare, Michael, Griffiths, William, King, Graham, Carberry, Peter, Pipai, Rachel, McNeill, Ann, Meekers, Petra, Lord, Simon, Butler, James, Pattison, Tony, Armour, John, and Dewhurst, Charles (2010) Environmental sustainability of oil palm cultivation in Papua New Guinea. ACIAR Technical Reports, 75 . Australian Centre for International Agricultural Research, Canberra, ACT, Australia.

Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove (2008) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, NSW, Australia.

Friedman, K., Purcell, S., Bell, J., and Hair, C. (2008) Sea Cucumber Fisheries: a manager's toolbox. Australian Centre for International Agricultural Research (ACIAR), Canberrra, ACT.

Gehrke, Peter, and Sheaves, Marcus (2006) Research Priorities To Sustain Coastal Fisheries Resources In The Great Barrier Reef Region: a scoping study for the Tully-Murray catchment. CSIRO, Canberra.

Thesis

Noonan, Sam Hamilton Croft (2022) Responses of corals and coral reef ecosystems to ocean acidification under variable temperature and light. PhD thesis, James Cook University.

Steinig, Eike Joachim (2021) Genomic epidemiology of community-associated Staphylococcus aureus in northern Australia and Papua New Guinea. PhD thesis, James Cook University.

Nayfa, Maria George (2020) Domestication in aquaculture fishes - elucidating the genetic consequences in Nile Tilapia (Oreochromis niloticus). PhD thesis, James Cook University.

Budd, Alyssa (2020) Epigenetic effects of temperature on sex change in barramundi, Lates calcarifer. PhD thesis, James Cook University.

Joyce, Melissa (2020) Understanding the nutritional requirements of redclaw (Cherax quadricarinatus): determining the apparent digestibility of raw materials and quantifying dietary lysine requirement. Masters (Research) thesis, James Cook University.

Sih, Tiffany L. (2019) Diving into the deep-end: investigating tropical deep-reef fish assemblages. PhD thesis, James Cook University.

Chakravarti, Leela J. (2019) Manipulation of coral photosymbionts for enhancing resilience to environmental change. PhD thesis, James Cook University.

McClure, Eva Claire (2019) No-take marine reserve performance under varying environmental and anthropogenic influences. PhD thesis, James Cook University.

Velu, Chinnathambi (2019) Potential of tropical filamentous cyanobacteria for low-cost bioremediation and bioproduct synthesis. PhD thesis, James Cook University.

Banh, Thi Quyen Quyen (2019) Sex differentiation of barramundi lates calcarifer – understanding male sexual development and its manipulation through exogenous steroids and non-steroidal aromatase inhibitor. PhD thesis, James Cook University.

Jurriaans, Saskia (2019) Thermal performance of scleractinian corals. PhD thesis, James Cook University.

Miller, Rachel Lynn (2019) Understanding stakeholder involvement in the policy and management of migratory taxa in the Australian marine environment: a case study approach. PhD thesis, James Cook University.

Loffler, Zoe (2019) The persistence of Sargassum communities on coral reefs: resilience and herbivory. PhD thesis, James Cook University.

Montanari, Stefano R. (2018) Causes and consequences of natural hybridisation among coral reef butterflyfishes (Chaetodon: Chaetodontidae). PhD thesis, James Cook University.

Vaughan, David Brendan (2018) Cleaner shrimp as biocontrols in aquaculture. PhD thesis, James Cook University.

MacDonald, Chancey (2018) Depth as refuge: depth gradients in ecological pattern, process, and risk mitigation among coral reef fishes. PhD thesis, James Cook University.

Johnson, Johanna (2018) Development and implementation of a vulnerability assessment tool to inform decision-making in socio-ecological systems. PhD thesis, James Cook University.

Jarrold, Michael D. (2018) Effects of diel CO₂ cycles on the early development and behaviour of coral reef fishes under ocean acidification. PhD thesis, James Cook University.

Trujillo-González, Alejandro (2018) Parasite threats from the ornamental fish trade. PhD thesis, James Cook University.

Bergseth, Brock J. (2018) Poaching in marine protected areas: drivers of and responses to illegal fishing. PhD thesis, James Cook University.

Noble, Tansyn Honi (2018) Selective breeding for tolerance to gill-associated virus in the black tiger shrimp, Penaeus monodon. PhD thesis, James Cook University.

Riskas, Kimberly Anne (2017) Addressing sources of data deficiency for sea turtles and fisheries in the Indian Ocean and Southeast Asia. PhD thesis, James Cook University.

Moorhead, Jonathan Allyn (2017) Broodstock management, development of rearing systems, and feeding regimes for larvae of the forktail blenny, Meiacanthus atrodorsalis. PhD thesis, James Cook University.

Hughes, Alec Tamana (2017) Demographic and reproductive characteristics of the squaretail coralgrouper (Plectropomus areolatus) in Solomon Islands. PhD thesis, James Cook University.

Nguyen Dinh Quang, Duy (2017) Developing hatchery culture of the tropical sea cucumber, Holothuria scabra, using micro-algae concentrates. PhD thesis, James Cook University.

Bastos Gomes, Giana (2017) Ecology and detection of harmful freshwater fish ciliate parasites Chilodonella spp. in aquaculture. PhD thesis, James Cook University.

Razaghi, Ali (2017) Evaluation of expression systems of recombinant human interferon gamma. PhD thesis, James Cook University.

Ram, Ravinesh (2017) Influence of processing techniques on quality and nutritional composition of the tropical sea cucumber Holothuria scabra. PhD thesis, James Cook University.

Matley, Jordan Kyle (2017) Investigation of coral trout (Plectropomus spp.) movement patterns and resource use: a multidisciplinary approach using acoustic telemetry and dietary indicators. PhD thesis, James Cook University.

Sparrow, Leanne (2017) Key factors influencing the occurrence and frequency of ciguatera. PhD thesis, James Cook University.

Nicolet, Katia Jane (2017) Vectors and environmental drivers of coral disease dynamics on the Great Barrier Reef. PhD thesis, James Cook University.

Brazenor, Alexander Karlis (2017) The biology of the cosmopolitan fish parasite Neobenedenia girellae. PhD thesis, James Cook University.

Militz, Thane A. (2017) A review of the Papua New Guinea marine aquarium fishery. PhD thesis, James Cook University.

Jones, Ben C. (2016) Addressing quality deficits in farmed barramundi: optimising flavour and quality through pre-harvest practices. PhD thesis, James Cook University.

Connolly, Niall Michael (2016) Bottom-up effects via heterotrophic pathways in invertebrate assemblages of tropical streams: nutrients, leaf litter and the relationship between productivity and diversity. PhD thesis, James Cook University.

Humanes Schumann, Adriana (2016) Combined effects of water quality and temperature on the early life history stages of the broadcast spawning coral Acropora tenuis. PhD thesis, James Cook University.

Emslie, Michael J. (2016) Effects of habitat versus fisheries management on spatio-temperal variation in fish assemblages on the Great Barrier Reef. PhD thesis, James Cook University.

Lienart, Govinda-Das Hugo (2016) Effects of temperature and food availability on the antipredator behaviour of juvenile coral reef fishes. PhD thesis, James Cook University.

Rocker, Melissa M. (2016) Effects of water quality on the health and condition of inshore corals. PhD thesis, James Cook University.

Brandl, Simon Johannes (2016) Functional niche partitioning in herbivorous coral reef fishes. PhD thesis, James Cook University.

Basiita, Rose Komugisha (2016) Genetic structure and biogeography of three commercially important African freshwater fishes: Lates niloticus, Bagrus docmak and Bagrus bayad. PhD thesis, James Cook University.

Lal, Monal M. (2016) Genetic structure, population connectivity and taxonomic identity of the black-lip pearl oyster Pinctada margaritifera (Bivalvia: Pteriidae), across its Indo-Pacific distribution. PhD thesis, James Cook University.

Boström Einarsson, Lisa (2016) Habitat degradation and competition for resources in coral reef fishes. PhD thesis, James Cook University.

Leahy, Susannah Marie (2016) Habitat determinants of Chaetodon butterflyfish and fishery-targeted coral reef fish assemblages in the central Philippines. PhD thesis, James Cook University.

Acheampong, Emmanuel Opoku (2016) Impact of roads on farm size, market participation, and forest cover change in rural Ghana. Masters (Research) thesis, James Cook University.

Ow, Yan Xiang (2016) Interactive effects of ocean acidification and declining water quality on tropical seagrass physiology. PhD thesis, James Cook University.

Collins, Geoffrey M. (2016) Phenotypic drivers of hypoxia tolerance in a tropical diadromous fish (Lates calcarifer). PhD thesis, James Cook University.

Poulos, Davina Elise (2016) Priority effects and the dynamics of coral reef fish assemblages. PhD thesis, James Cook University.

Dao, Hoc Tan (2016) Recruitment and genetic population genetics of spiny lobsters, Panulirus ornatus and P. homarus in the south-east Asian archipelago. PhD thesis, James Cook University.

Angell, Alex Raymond (2016) Seaweeds as an alternative crop for the production of protein. PhD thesis, James Cook University.

Gainsford, Ashton (2016) A multi-disciplinary evaluation of the hybrid anemonefish Amphiprion leucokranos: behaviour shaping evolutionary outcomes of hybridization. PhD thesis, James Cook University.

Berner, Florian (2015) Assessment & design of perfused microalgal biofilm cultivation processes. PhD thesis, James Cook University.

Trujillo González, Alejandro (2015) Behaviour, histopathology and immunobiology: interactions between the ectoparasite Neobenedenia (Monogenea: Capsalidae) and its host, Lates calcarifer (Perciformes: Latidae). Masters (Research) thesis, James Cook University.

Kramer, Michael John (2015) Crustacea on coral reefs: habitat associations and trophic relationships. PhD thesis, James Cook University.

Alajmi, Fahad F. (2015) Developing intensive culture techniques for the tropical copepod Parvocalanus crassirostris as a live feed for aquaculture. PhD thesis, James Cook University.

Stella, Jessica (2015) Effects of climate change-induced thermal stress and habitat degradation to the biodiversity and species composition of coral-associated invertebrates. PhD thesis, James Cook University.

Taylor, Brett McCully (2015) Environmental and fishery-induced effects on life histories and assemblages of parrotfishes. PhD thesis, James Cook University.

Thobejane, Tubake Refiloe (2015) Improvement of formulated feeds and feeding management for redclaw aquaculture in Australia. Masters (Research) thesis, James Cook University.

Lédée, Elodie Jacqueline Isabelle (2015) Improving understanding of spatial ecology through network analysis of acoustic monitoring data. PhD thesis, James Cook University.

Sheaves, Janine (2015) Influence of seasonal variability and salinity gradients on benthic invertebrate assemblages in tropical and subtropical Australian estuaries. PhD thesis, James Cook University.

Lober, Malwine (2015) Investigation of the aquaculture potential of an Australian freshwater prawn, Macrobrachium spinipes (Schenkel, 1902), with emphasis on spawning induction, larval and nursery culture. Masters (Research) thesis, James Cook University.

von Alvensleben, Nicolas (2015) Microalgal species prospecting and characterisation for salinity tolerance, nutrient remediation and bio-product potential. PhD thesis, James Cook University.

Rechetelo, Juliana (2015) Movement, habitat requirements, nesting and foraging site selection: a case study of an endangered granivorous bird, the Black-throated finch Poephila cincta cincta in north-eastern Australia. PhD thesis, James Cook University.

Jin, Young Koo (2015) Nature or nurture? Testing the correlation between stress tolerance and genotype in the coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.

Gosch, Björn Jürgen (2015) Oil content and quality in tropical seaweeds. PhD thesis, James Cook University.

Jankowski, Matthew William (2015) Relationships among depth distributions, habitat specialisation and demography in coral reef fish communities. PhD thesis, James Cook University.

Lefèvre, Carine D. (2015) Small cryptic fishes on coral reefs: ecological effects of extreme life history traits. Masters (Research) thesis, James Cook University.

Shimada, Takahiro (2015) Spatial ecology and conservation of sea turtles in coastal foraging habitat. PhD thesis, James Cook University.

Hall, April Elizabeth (2015) Top-down control, trophic interactions, and the importance of predatory fishes on coral reefs. PhD thesis, James Cook University.

Rizzari, Justin R. (2015) Trophic impact of large predators on coral reefs and management implications. PhD thesis, James Cook University.

Robinson, Jan (2015) Vulnerability to fishing in reef fishes that aggregate. PhD thesis, James Cook University.

Pattiselanno, Freddy (2015) Wildlife hunting, alternative protein sources and biodiversity conservation on the Bird's Head Peninsula of West Papua, Indonesia. PhD thesis, James Cook University.

Schmidt, Katrin (2015) The ecological role of tadpoles in streams of the Australian Wet Tropics. PhD thesis, James Cook University.

Atherton, Jennifer Ann (2015) The effect of parental and embryonic predator environments on offspring. PhD thesis, James Cook University.

Allan, Bridie Jean Marie (2015) The effects of climate change on predator-prey interactions in coral reef fish. PhD thesis, James Cook University.

White, James Ryan (2015) The role of boldness and other personality traits in the ecology of juvenile marine fishes. PhD thesis, James Cook University.

Kerry, James Timothy (2015) The role of tabular structure in the ecology of large reef fishes. PhD thesis, James Cook University.

Casey, Jordan Marie (2015) The role of territorial grazers in coral reef trophic dynamics from microbes to apex predators. PhD thesis, James Cook University.

Hodge, Jennifer Reneé (2014) Biogeography and the evolution of coral reef fish species. PhD thesis, James Cook University.

Paley, Allison Susanna (2014) Colour polymorphism and its role in stress tolerance in the coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.

van de Water, Johannes A.J.M. (2014) Corals under stress: a study of the coral innate immune system. PhD thesis, James Cook University.

Cowlishaw, Melissa (2014) Determinants of home range and territory size in coral reef fishes. PhD thesis, James Cook University.

Brooker, Rohan Maurice Ralfe (2014) Determinants of resource specialisation and its ecological consequences for the corallivorous filefish, Oxymonacanthus longirostris. PhD thesis, James Cook University.

Lema, Anaïs Kimberley (2014) Diversity, stability, and uptake of diazotrophic bacterial communities associated with corals of the Great Barrier Reef. PhD thesis, James Cook University.

Athauda, A.R. Saman Bandara (2014) Effect of culture environmental conditions on sex inversion of Asian seabass (barramundi), Lates calcarifer (Bloch). PhD thesis, James Cook University.

McLeod, Ian Michael (2014) Effects of ocean warming on the larval development of coral reef fishes. PhD thesis, James Cook University.

Domingos, Jose A.S. (2014) Filling in the gaps impeding the instigation of selective breeding programs in barramundi Lates calcarifer: fate of genetic diversity through to harvest, estimation of genetic parameters and early prediction of family growth based on cellular processes. PhD thesis, James Cook University.

Vučko, Matthew John (2014) Innovative antifouling technologies: microtexture and metal. PhD thesis, James Cook University.

Miller, Gabrielle May (2014) Intergenerational effects of climate change on a coral reef fish, Amphiprion melanopus. PhD thesis, James Cook University.

Adkins, Merritt Elizabeth (2014) Large bodied fish communities and drivers of use in the shallow waters of a coastal habitat mosaic. Masters (Research) thesis, James Cook University.

Huerlimann, Roger Stephan (2014) Microalgal lipid biosynthesis: phylogeny of acetyl-CoA carboxylase and gene expression patterns of key enzymes. PhD thesis, James Cook University.

Davis, Benjamin James (2014) Patterns and processes at multiple scales shape fish assemblage structure in tropical estuaries. PhD thesis, James Cook University.

Ma, Ka Yan (2014) Patterns and processes of diversification in groupers (family: Epinephelidae). PhD thesis, James Cook University.

Gordon, Matthew (2014) Quantifying ecological aspects of the seasonally abundant box jellyfish Chironex fleckeri within coastal and estuarine waters of Far North Queensland. PhD thesis, James Cook University.

Figa, Boga Soni (2014) Spatio-temporal dynamics and population biology of the Fly River Herring (Nematalosa papuensis): implications for freshwater lake management in Papua New Guinea. PhD thesis, James Cook University.

Mooney, Christopher James (2014) Statoliths of cubozoan jellyfishes: their utility to discriminate taxa and elucidate population ecology. PhD thesis, James Cook University.

Beeden, Roger John (2014) A dynamic understanding of coral reef health informs resilience-based management of the Great Barrier Reef. PhD thesis, James Cook University.

Abdul Wahab, Muhammad Azmi (2014) A holistic approach towards understanding population dynamics of a coral reef sponge. PhD thesis, James Cook University.

Welsh, Justin Quentin (2014) The spatial ecology of coral reef fishes. PhD thesis, James Cook University.

Ellison, Michael Brian (2013) Bioremediation of coal-fired power station waste water using freshwater filamentous algae from the genus Oedogonium. Masters (Research) thesis, James Cook University.

van der Meer, Martin H. (2013) Coming, going, gone?: Population connectivity and extinction risk in restricted range coral reef fishes on isolated islands. PhD thesis, James Cook University.

Beck, Emadch (2013) Comparative phylogeography of four Indo-Pacific scarine labrids: an insight into the evolutionary patterns of reef fish. PhD thesis, James Cook University.

MacIntosh, Hugh (2013) Competition and coexistence in tropical Australian shipworms. PhD thesis, James Cook University.

Warner, Patricia A. (2013) Evolutionary and ecological connectivity at hierarchical scales from sperm to species in the reef-building coral genus Seriatopora. PhD thesis, James Cook University.

Jones, David Byron (2013) Genomic resources and genetic dissection of complex quantitative traits in the silver-lipped pearl oyster, Pinctada maxima. PhD thesis, James Cook University.

Lee, Michael Siu Fung (2013) Growth and nitrogen fixation of inland and coastal tropical Acacia species. Masters (Research) thesis, James Cook University.

Lamb, Joleah B. (2013) Influence of marine-based industries on coral health and disease. PhD thesis, James Cook University.

Newton, James Raymond (2013) Investigating the genetics of thermal tolerance and adaptation to temperature amongst populations of Australian barramundi (Lates calcarifer). PhD thesis, James Cook University.

Wu, Xugan (2013) Lipid nutrition of early life history of two commercially important tropical crustaceans, the blue swimmer crab (Portunus pelagicus) and the ornate rock lobster (Panulirus ornatus), with emphasis on highly unsaturated fatty acids. PhD thesis, James Cook University.

Lönnstedt, Oona Margareta (2013) Predator-prey interactions and the importance of sensory cues in a changing world. PhD thesis, James Cook university.

Raina, Jean-Baptiste (2013) Production and fate of dimethylsulfoniopropionate (DMSP) in reef-building corals and its integral role in coral health. PhD thesis, James Cook University.

Manassa, Rachel Penelope (2013) Social learning and its role in anti-predator behaviour by coral reef fishes. PhD thesis, James Cook University.

Stegemann, Krista Elizabeth (2013) Spatio-temporal patterns of faunal distribution along a near-pristine estuarine edge environment. Masters (Research) thesis, James Cook University.

Wenger, Amelia Scher (2013) Suspended sediment and its effects on the behavior and physiology of coral reef fishes. PhD thesis, James Cook University.

Goatley, Christopher Harry Robert (2013) The ecological role of sediments on coral reefs. PhD thesis, James Cook University.

Sato, Yui (2012) Ecology and microbiology of black band disease: new insights into the etiology of an old coral disease. PhD thesis, James Cook University.

Johansen, Jacob L. (2012) Energetics of habitat use in planktivorous coral reef fishes: does specialization confer sensitivity to changing environmental conditions? PhD thesis, James Cook University.

Torda, Gergely (2012) Genetic assessment of population structure and the origin of recruits in brooding corals: understanding population connectivity on the Great Barrier Reef on various timescales. PhD thesis, James Cook University.

Harrison, Hugo B. (2012) Genetic parentage analysis as a tool for measuring larval connectivity in a network of marine reserves. PhD thesis, James Cook University.

de Paula Silva, Pedro Henrique (2012) Green tide algae integrated aquaculture for nitrogen bioremediation. PhD thesis, James Cook University.

Templeman, Michelle Anne (2012) Investigating the potential of jellyfishes as marine biomonitors and bioindicators of metal pollution. PhD thesis, James Cook University.

Fingerlos, Franz Martin (2012) Long-term variations in bycatch reduction device (BRD) effectiveness and trawl catch rates in a tropical fish assemblage. Masters (Research) thesis, James Cook University.

Cetina Heredia, Paulina (2012) Modelling physical and biological drivers of larval retention in reef systems. PhD thesis, James Cook University.

Wen, Colin Kuo-Chang (2012) Recruitment hotspots in the ecology and management of large predatory fishes on coral reefs. PhD thesis, James Cook University.

Carl, Christina (2012) Surface-based technologies and the settlement of Mytilus galloprovincialis. PhD thesis, James Cook University.

Chua, Chia-Miin (2012) The effects of ocean acidification and warming on the early life history stages of corals. PhD thesis, James Cook University.

Graham, Erin Marie (2012) The energetics of scleractinian coral larvae and implications for dispersal. PhD thesis, James Cook University.

Camus, Thomas (2012) The improvement of copepods intensive culture protocols as live feeds for aquaculture hatcheries. PhD thesis, James Cook University.

Mitchell, Matthew David (2012) The role of chemical alarm cues in risk assessment and predator recognition in coral reef fishes. PhD thesis, James Cook University.

Fox, Rebecca J. (2012) The trophic and spatial ecology of rabbitfishes (Perciformes, Siganidae) on coral reefs. PhD thesis, James Cook University.

Tziouveli, Vasiliki (2011) Broodstock conditioning and larval rearing of the marine ornamental white-striped cleaner shrimp, Lysmata amboinensis (de Man, 1888). PhD thesis, James Cook University.

Donelson, Jennifer Marie (2011) Climate change and the future for coral reef fishes: the potential for acclimation. PhD thesis, James Cook University.

Howells, Emily (2011) Coral symbionts in warming seas: population dynamics, adaptation and acclimatisation of Symbiodinium. PhD thesis, James Cook University.

Cowman, Peter Francis (2011) Dating the evolutionary origins of coral reef fishes. PhD thesis, James Cook University.

Villacorta Rath, Ana Cecilia (2011) Determinants of selective mortality during the early life history of Spratelloides delicatulus in the northern Great Barrier Reef. Masters (Research) thesis, James Cook University.

Wassnig, Matthew (2011) Developing hatchery culture techniques for the winged pearl oyster, Pteria penguin (Röding, 1798). PhD thesis, James Cook University.

Haapkylä, Jessica (2011) Dynamics and drivers of coral disease on Indo-Pacific reefs. PhD thesis, James Cook University.

Botte, Emmanuelle (2011) Effects of pesticide exposure and thermal stress in a model tropical reef fish, the damselfish Acanthochromis polyacanthus. PhD thesis, James Cook University.

Kvingedal, Renate (2011) Environment, genes and the effects of genotype by environment (G x E) interactions, on the expression of commercially important traits in the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.

Horne, John Barton (2011) Evolutionary and ecological genetic patterns of widespread unicornfishes: investigations of the non-geographic clades phenomenon. PhD thesis, James Cook University.

McGinty, Erin Louise (2011) Genetic contribution to pearl formation. PhD thesis, James Cook University.

Ballagh, Debra Anne (2011) Intensive rearing techniques and feeding behaviour of larval and juvenile mulloway, Argyrosomus japonicus. PhD thesis, James Cook University.

De Santis, Christian (2011) Regulation of growth: understanding the myostatin functioning in two important aquaculture species, barramundi (Lates calcarifer) and black tiger shrimp (Penaeus monodon). PhD thesis, James Cook University.

Abesamis, Rene A. (2011) Replenishment and connectivity of reef fish populations in the central Philippines. PhD thesis, James Cook University.

Milione, Michael (2011) Reproduction and growth of the winged pearl oyster, Pteria penguin (Röding, 1798) in the Great Barrier Reef lagoon. PhD thesis, James Cook University.

Dixson, Danielle Lynn (2011) Smelling home: the use of olfactory cues for settlement site selection by coral reef fish larvae. PhD thesis, James Cook University.

Mat Noordin, Noordiyana (2011) Towards development of a formulated diet for blue swimmer crab, Portunus pelagicus with emphasis on lipid nutrition. PhD thesis, James Cook University.

Littman, Raechel (2011) The dynamics of bacterial populations associated with corals and the possible role of bacterial pathogens in coral bleaching. PhD thesis, James Cook University.

Luter, Heidi M. (2011) The effects of disease and stress on the microbial community of the sponge Ianthella basta. PhD thesis, James Cook University.

Devine, Brynn Michelle (2011) The effects of ocean acidification on habitat associations of coral reef fishes. Masters (Research) thesis, James Cook University.

Cumbo, Vivian Ruth (2011) The establishment and development of symbiosis in coral larvae. PhD thesis, James Cook University.

Palmer, Caroline V. (2010) Biological mechanisms of coral immunity. PhD thesis, James Cook University.

Romano, Nicholas (2010) Investigating the survival, growth and osmoregulatory responses of blue swimmer crab, Portunus pelagicus, early juveniles to salinity and ammonia challenge. PhD thesis, James Cook University.

Pollock, Frederic Joseph (2010) Phylogeny of the coral pathogen Vibrio coralliilyticus and the development of a qPCR-based diagnostic assay for its detection. Masters (Research) thesis, James Cook University.

Peverell, Stirling Charles (2010) Sawfish (Pristidae) of the Gulf of Carpentaria, Queensland, Australia. Masters (Research) thesis, James Cook University.

Lee, Anne Michelle (2010) Spatio-temporal factors affecting the growth of cultured silver-lip pearl oyster, Pinctada maxima (Jameson) (Mollusca: Pteriidae) in West Papua, Indonesia. PhD thesis, James Cook University.

Fraser, Matthew Robert (2009) Egg predation at tropical reef fish spawning aggregation sites: trade-offs for fitness. PhD thesis, James Cook University.

Edmunds, Richard C. (2009) Evidence for thermal adaptation among geographically, genetically and thermally distinct populations of the Australian barramundi, Lates calcarifer (Bloch 1790): a multi-level approach. PhD thesis, James Cook University.

Williamson, David (2009) Fishery effects and benefits of marine protected areas within the Great Barrier Reef Marine Park. PhD thesis, James Cook University.

Evans, Richard (2009) No-take marine protected areas: abundance, biomass, batch fecundity and genetic connectivity of target species on the Great Barrier Reef. PhD thesis, James Cook University.

Walker, Stefan Peter William (2009) Phenotypic plasticity across natural- and sexual-selection gradients in a reef fish. PhD thesis, James Cook University.

Lind, Curtis E. (2009) Population genetics, phylogeography and the effects of aquaculture on genetic diversity of the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.

Holmes, Thomas (2009) Processes and mechanisms of predatory interactions on newly settled reef fish. PhD thesis, James Cook University.

Richards, Zoe Trisha (2009) Rarity in the coral genus Acropora: implications for biodiversity conservation. PhD thesis, James Cook University.

Pirozzi, Igor (2009) A factorial approach to defining the dietary protein and energy requirements of mulloway, Argyrosomus japonicus : optimising feed formulations and feeding strategies. PhD thesis, James Cook University.

Hoogenboom, Mia O. (2008) Physiological models of performance for scleractinian corals. PhD thesis, James Cook University.

Holme, May-Helen (2008) Towards development of a formulated diet for mud crab (Scylla serrata) larvae, with emphasis on lipid nutrition. PhD thesis, James Cook University.

Busilacchi, Sara (2008) The subsistence coral reef fish fishery in the Torres Strait: monitoring protocols and assessment. PhD thesis, James Cook University.

Ranatunga, R.R.M.K.P. (2007) Demographic patterns in coral reef fishes: biogeographic trends and fishing effects. PhD thesis, James Cook University.

Curley, Belinda G. (2007) Estimating dispersal and population connectivity for temperate reef fishes at multiple spatial scales. PhD thesis, James Cook University.

Bergenius, Mikaela A.J. (2007) Stock structure of a coral reef fish, Plectropomus leopardus: identification and implications for harvest strategy evaluation. PhD thesis, James Cook University.

Martínez-Fernández, Erika (2007) Use of tropical microalgae species as food for pearl oyster (Pinctada margaritifera L.) larvae. PhD thesis, James Cook University.

Feary, David A. (2007) The influence of coral degradation on tropical fish community structure. PhD thesis, James Cook University.

Louden, Daniel James (2006) Bath sponge aquaculture: aspects of culture and quality. Masters (Research) thesis, James Cook University.

Scardino, Andrew J. (2006) Biomimetic fouling control. PhD thesis, James Cook University.

Mutz, Stephanie J. (2006) Comparative growth dynamics of Acanthurid fishes. Masters (Research) thesis, James Cook University.

Lloyd, Julie Anne (2006) Demography of Pristipomoides multidens in northern Australia and a comparison within the Family Lutjanidae with respect to depth. PhD thesis, James Cook University.

Berumen, Michael Lee (2006) Influence of resource availability on lifehistory traits in coral-feeding butterflyfishes (Pisces: Chaetodontidae). PhD thesis, James Cook University.

Bendell, Barry E. (2006) Interactions amongst invertebrates, epiphytes, and seagrasses in tropical intertidal meadows. PhD thesis, James Cook University.

Ettinger-Epstein, Piers (2006) Natural products and their supply from the tropical sponge Luffariella variabilis. PhD thesis, James Cook University.

Eagle, Janelle Vinita (2006) Recruitment hotspots around a coral reef: the roles of hydrodynamics and habitats. PhD thesis, James Cook University.

Srinivasan, Maya (2006) Recruitment in time and space: the dynamics and distributions of reef fish populations on a low latitude coral reef. PhD thesis, James Cook University.

Sofonia, Jeremy (2006) Sediment responses of corals from inshore reefs, Great Barrier Reef, Australia. Masters (Research) thesis, James Cook University.

Depczynski, Martial (2006) Small cryptic fishes on coral reefs : a new perspective on reef fish ecology and life histories. PhD thesis, James Cook University.

Boyett, Holly Virginia (2006) The ecology and microbiology of black band disease and brown band syndrome on the Great Barrier Reef. Masters (Research) thesis, James Cook University.

Gagliano, Monica (2006) The role of early life history traits on the survival of a coral reef fish. PhD thesis, James Cook University.

Sapolu, Tebaua (2005) Age-based demography and reproductive ontogeny of angelfishes belonging to the family Pomacanthidae. Masters (Research) thesis, James Cook University.

Herbert, Brett (2005) Feeding and growth of golden perch (Macquaria ambigua), and assessment of its potential for aquaculture. PhD thesis, James Cook University.

Konow, Nicolai (2005) Feeding ecomorphology in angelfishes, f. Pomacanthidae: the implications of functional innovations on prey-dislodgement in biting reef fishes. PhD thesis, James Cook University.

Horne, Michael Gary (2005) Investigation into development and preparation of 'artificial' food particles for tropical rock lobster, Panulirus ornatus, phyllosoma. Masters (Research) thesis, James Cook University.

Marriott, Ross James (2005) Population biology, dynamics and their implications for management of red bass: a large, long-lived reef fish. PhD thesis, James Cook University.

Smith, Luke Darren (2005) Resilience and recovery of coral communities on an isolated reef system in Western Australia following a catastrophic mortality event. PhD thesis, James Cook University.

Flint, Nicole (2005) Sublethal effects of diel fluctuations in dissolved oxygen saturation on freshwater fishes from tropical Queensland. PhD thesis, James Cook University.

Gershwin, Lisa-ann (2005) Taxonomy and phylogeny of Australian cubozoa. PhD thesis, James Cook University.

Fulton, Christopher John (2005) Wave energy and the role of swimming in reef fish ecology. PhD thesis, James Cook University.

Claydon, John Alexander Brightman (2005) The structure and dynamics of spawning aggregations of coral reef fish. PhD thesis, James Cook University.

Acosta-Salmon, Hector (2004) Broodstock management and egg quality of the pearl oysters Pinctada margaritifera and Pinctada fucata. PhD thesis, James Cook University.

Genodepa, Jerome (2004) Development of a formulated diet for mud crab, Scylla sewata, larvae. Masters (Research) thesis, James Cook University.

Harrington, Lindsay Mortan (2004) Ecology of crustose coralline algae; interactions with scleractinian corals and responses to environmental conditions. PhD thesis, James Cook University.

Pit, Josiah Henk (2004) Feasibility of Akoya pearl oyster culture in Queensland. PhD thesis, James Cook University.

Ceccarelli, Daniela Monica (2004) Herbivorous fishes as determinants of the structure of coral reef communities: farmers, foragers and their interactions. PhD thesis, James Cook University.

True, James (2004) Massive Porites corals as indicators of environmental changes. PhD thesis, James Cook University.

Rotmann, Sandra (2004) Tissue thickness as a tool to monitor the stress response of massive porites corals to turbidity impact on Lihir Island, Papua New Guinea. PhD thesis, James Cook University.

Badger, Amanda Catherine (2004) The effects of nutrition on reproduction in the Eastern Rainbowfish, Melanotaenia splendida splendida. Masters (Research) thesis, James Cook University.

Madin, Joshua Simon (2004) A mechanistic approach to understanding and predicting hydrodynamic disturbance on coral reefs. PhD thesis, James Cook University.

Laman Trip, Elisabeth Daniele (2004) A multi-scale analysis of population dynamics and sexual size dimorphism in a widely distributed coral reef fish family (Acanthuridae). Masters (Research) thesis, James Cook University.

Vallejo, Benjamin (2003) Biogeography of coral reef shore gastropods in the Philippines. PhD thesis, James Cook University.

Wolstenholme, Jacqueline Kerri (2003) Species boundaries in scleractinian corals: a case study of the Acropora humilis species group. PhD thesis, James Cook University.

Bastidas, Ana Carolina (2002) Population dynamics and genetic structure of locally dominant species on coral reefs: a case study of the soft corals Sinularia flexibilis and Clavularia koellikeri. PhD thesis, James Cook University.

Bellwood, Orpha (2002) Systematics, biogeography and functional morphology of the Box Crabs (Family Calappidae). PhD thesis, James Cook University.

Fisher, Rebecca (2002) The functional capabilities of reef fish larvae: implications for dispersal during the pelagic phase. PhD thesis, James Cook University.

Berkelmans, Ray (2001) Bleaching, upper thermal limits and temperature adaptation in reef corals. PhD thesis, James Cook University.

Jompa, Jamaluddin (2001) Interactions between macroalgae and scleractinian corals in the context of reef degradation. PhD thesis, James Cook University.

Baird, Andrew Hamilton (2001) The ecology of coral larvae: settlement patterns, habitat selection and the length of the larval phase. PhD thesis, James Cook University.

Wilson, Shaun Kevin (2001) An investigation into the trophic nature of small reef fish from the tribe Salariini, family Blenniidae. PhD thesis, James Cook University.

Chang, Marshall C. (2000) Improvement of culture techniques for the seahorse Hippocampus sp. Masters (Research) thesis, James Cook University.

Cavanagh, Jo-Anne Elizabeth (2000) Organochlorine insecticide usage in the sugar industry of the Herbert and Burdekin River regions: chemical, biological, and risk assessments. PhD thesis, James Cook University.

Samoilys, Melita Anne (2000) Reproductive dynamics of an exploited serranid on the Great Barrier Reef. PhD thesis, James Cook University.

Michalek-Wagner, Kirsten (1999) The chemical ecology of the soft coral-zooxanthellae association and its signficance to the bleaching process. PhD thesis, James Cook University.

Munday, Philip L. (1999) The relationship between habitat use and the population ecology of coral-dwelling fishes (genus Gobiodon). PhD thesis, James Cook University.

Syms, Craig (1998) Habitat association, disturbance dynamics, and the role of spatial scale in structuring coral reef fish assemblages. PhD thesis, James Cook University.

Hall, Vicki R (1998) Injury and regeneration of reef-crest corals at Lizard Island, Great Barrier Reef, Australia. PhD thesis, James Cook University.

Stewart, Bryce D. (1998) Interactions between piscivorous coral reef fish and their prey. PhD thesis, James Cook University.

van Herwerden, Lynne (1998) The trematode genera Paragonimus and Schistosoma in East Asia: molecular evolution, phylogeny and biogeography. PhD thesis, James Cook University.

Fisk, David Anthony (1997) The role of recruitment in coral community regeneration. PhD thesis, James Cook University.

Purcell, Steven William (1997) The role of sediments in epilithic algal communities on coral reefs. PhD thesis, James Cook University.

Zeller, Dirk Christoph (1996) Patterns of movement of Plectropomus leopardus (Serranidae) in relation to spawning aggregations and marine protected areas, as determined by ultrasonic telemetry. PhD thesis, James Cook University.

Beukers, Joanne S. (1996) The relative roles of recruitment and post-recruitment processes in the regulation of a coral reef damselfish population. PhD thesis, James Cook University.

Santurtun, Marina (1995) Catch structure and dynamics of Antillean "Z" traps on a coral reef: interaction between trap characteristics and fish behaviour. Masters (Research) thesis, James Cook University.

Sheaves, Marcus John (1995) Estuaries as juvenile habitats for lutjanid and serranid fishes in tropical northeastern Australia. PhD thesis, James Cook University.

St John, Jill (1995) Feeding ecology of the coral trout, Plectropomus leopardus (Serranidae), on the Great Barrier Reef, Australia. PhD thesis, James Cook University.

Davies, Campbell Robert (1995) Patterns of movement of three species of coral reef fish on the Great Barrier Reef. PhD thesis, James Cook University.

Newman, Stephen John (1995) Spatial variability in the distribution, abundance, growth, mortality and age structures of tropical snappers (Pisces: Lutjanidae) in the Central Great Barrier Reef, Australia. PhD thesis, James Cook University.

Alderslade, Philip Norman (1995) Taxonomic studies within the gorgonian family Isididae (Coelenterata: Octocorallia). PhD thesis, James Cook University.

Lheknim, Vachira (1995) An evaluation of the relative nursery value of sandy shore surf zones and estuary mouths in tropical North Queensland, Australia. PhD thesis, James Cook University of North Queensland.

Shand, Julia (1994) Changes in the visual system of teleost fishes during growth and settlement: an ecological perspective. PhD thesis, James Cook University.

Stobart, Ben (1994) Delimiting coral species using alternative techniques: Montipora digitata (Dana, 1846), a case study. PhD thesis, James Cook University.

Grutter, Alexandra Sara (1994) Parasites in the cleaning interactions between Labroides dimidiatus and fish. PhD thesis, James Cook University.

Green, Alison Lesley (1994) The early life history of labroid fishes at Lizard Island, Northern Great Barrier Reef. PhD thesis, James Cook University.

Butler, Ian Robert Jacques (1994) An investigation into what constitutes lethal wounding in Acanthaster planci and an assessment of the effects of regeneration on gonad production. Masters (Research) thesis, James Cook University of North Queensland.

Martin-Smith, Keith Michael (1994) The role of epifaunal crustaceans on Sargassum spp. at Magnetic Island, Great Barrier Reef, Australia. PhD thesis, James Cook University.

Ferreira, Beatrice Padovani (1993) Age, growth, reproduction and population biology of Plectropomus spp (Epinephelinae: Serranidae) on the Great Barrier Reef, Australia. PhD thesis, James Cook University.

Thorrold, Simon Robert (1993) Meso-scale patterns in the distribution of larval fishes across the central Great Barrier Reef lagoon and relationships with environmental variability. PhD thesis, James Cook University.

Molony, Brett Wymond (1993) The use of multiple indices in the description of growth in the tropical estuarine fish Ambassis vachelli, Richardson (Pisces: Chandidae), with reference to the effects of feeding history. PhD thesis, James Cook University.

van Woesik, Robert (1992) Ecology of coral assemblages on continental islands in the southern section of the Great Barrier Reef, Australia. PhD thesis, James Cook University.

Chongprasith, Pornsook (1992) Nutrient release and nitrogen transformations resulting from resuspension of Great Barrier Reef shelf sediments. PhD thesis, James Cook University of North Queensland.

McCormick, Mark Ian (1992) The influence of pelagic life history on the quality of tropical goatfish (family Mullidae) at settlement. PhD thesis, James Cook University.

Clements, Kendall David (1991) Gut microorganisms of surgeonfishes (family Acanthuridae). PhD thesis, James Cook University of North Queensland.

Cabanban, Annadel Salvio (1991) The dynamics of leiognathidae in a tropical demersal ichthyofaunal community. PhD thesis, James Cook University.

Fromont, Jane (1990) A taxonomic study of tropical marine sponges (Porifera: Demospongiae: Haplosclerida and Petrosida) using morphological, chemical and reproductive character sets. PhD thesis, James Cook University.

Willis, Bette Lynn (1987) Morphological variation in the reef corals Turbinaria esenterina and Pavona cactus: synthesis of transplant, histocompatibility, electrophoresis, growth, and reproduction studies. PhD thesis, James Cook University.

Babcock, Russell Clayton (1986) A comparison of the population ecology of reef flat corals of the family Faviidae (Goniastrea, Platygyra). PhD thesis, James Cook University.

Perez, Orpha Salatandre (1985) Studies on the biology of the Indo-Pacific sandy shore crab, Matuta lunaris Forskål (Brachyura: Calappidae). Masters (Research) thesis, James Cook University.

Bellwood, David Roy (1985) The functional morphology, systematics and behavioural ecology of parrotfishes (family Scaridae). PhD thesis, James Cook University.

Collins, John Douglas (1978) A study of the interactive biology of corals. PhD thesis, James Cook University.

This list was generated on Fri Nov 22 22:26:29 2024 AEST.