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Number of items at this level: 2073.

A

Anderson, R Charles, Herrera, Miguel, Ilangakoon, Anoukchika D., Koya, K.M., Moazzam, M., Mustika, Putu L., and Sutaria, Dipani N. (2020) Cetacean bycatch in Indian Ocean tuna gillnet fisheries. Endangered Species Research, 41. pp. 39-53.

Adams, Matthew P., Koh, Edwin J.Y., Vilas, Maria P., Collier, Catherine J., Lambert, Victoria M., Sisson, Scott A., Quiroz, Matias, McDonald-Madden, Eve, McKenzie, Len J., and O'Brien, Katherine R. (2020) Predicting seagrass decline due to cumulative stressors. Environmental Modelling & Software, 130. 104717.

Al Moajil-Cole, Grace (2019) Exploring the role of microbes in coral-algal interactions on the inshore Great Barrier Reef. Masters (Research) thesis, James Cook University.

Aihara, Yusuke, Maruyama, Shinichiro, Baird, Andrew H., Iguchi, Akira, Takahashi, Shunichi, and Minagawa, Jun (2019) Green fluorescence from cnidarian hosts attracts symbiotic algae. Proceedings of the National Academy of Sciences of the United States of America, 116 (6). pp. 2118-2123.

Andrade Rodríguez, Natalia Alexandra (2018) Non-contact competition between soft and hard corals: a transcriptomic perspective. PhD thesis, James Cook University.

Anderson, Kristen D., Cantin, Neal E., Heron, Scott F., Lough, Janice M., and Pratchett, Morgan S. (2018) Temporal and taxonomic contrasts in coral growth at Davies Reef, central Great Barrier Reef, Australia. Coral Reefs, 37 (2). pp. 409-421.

Anderson, Kristen D., Cantin, Neal E., Heron, Scott F., Pisapia, Chiara, and Pratchett, Morgan S. (2017) Variation in growth rates of branching corals along Australia's Great Barrier Reef. Scientific Reports, 7. 2920. pp. 1-13.

Asson, Danielle, Chapman, John W., and Dumbauld, Brett R. (2017) No evidence that the introduced parasite Orthione griffenis markham, 2004 causes sex change or differential mortality in the native mud shrimp, Upogebia pugettensis (Dana, 1852). Aquatic Invasions, 12 (2). pp. 213-224.

Adams, Matthew P., Collier, Catherine J., Uthicke, Sven, Ow, Yan X., Langlois, Lucas, and O'brien, Katherine R. (2017) Model fit versus biological relevance: evaluating photosynthesis-temperature models for three tropical seagrass species. Scientific Reports, 7. 39930. pp. 1-12.

Andrello, Marco, Guilhaumon, François, Albouy, Camille, Parravicini, Valeriano, Scholtens, Joeri, Verley, Philippe, Barange, Manuel, Sumaila, U. Rashid, Manel, Stéphanie, and Mouillot, David (2017) Global mismatch between fishing dependency and larval supply from marine reserves. Nature Communications, 8. 16039.

Atherton, Jennifer Ann, and McCormick, Mark Ian (2017) Kin recognition in embryonic damselfishes. Oikos, 126 (7). pp. 1062-1069.

Ainsworth, T.D., Fordyce, A.J., and Camp, E.F. (2017) The other microeukaryotes of the coral reef microbiome. Trends in Microbiology, 25 (12). pp. 980-991.

Aschenbroich, Adélaïde, Michaud, Emma, Stieglitz, Thomas, Fromard, Francois, Gardel, Antoine, Tavares, Marcos, and Thouzeau, Gérard (2016) Brachyuran crab community structure and associated sediment reworking activities in pioneer and young mangroves of French Guiana, South America. Estuarine, Coastal and Shelf Science, 182 (Part A). pp. 60-71.

Adjeroud, Mehdi, Wallace, Carden C., Bosserelle, Pauline, Payri, Claude, Menou, Jean-Louis, and Pichon, Michel (2016) Reefs at the edge: coral community structure around Rapa, southernmost French Polynesia. Marine Ecology, 37 (3). pp. 565-575.

Angly, Florent E., Pantos, Olga, Morgan, Thomas C., Rich, Virginia, Tonin, Hemerson, Bourne, David G., Mercurio, Philip, Negri, Andrew P., and Tyson, Gene W. (2016) Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon. PeerJ, 4. e1758. pp. 1-23.

Angly, Florent E., Heath, Candice, Morgan, Thomas C., Tonin, Hemerson, Rich, Virginia, Schaffelke, Britta, Bourne, David G., and Tyson, Gene W. (2016) Marine microbial communities of the Great Barrier Reef lagoon are influenced by riverine floodwaters and seasonal weather events. PeerJ, 4. e1511. pp. 1-24.

Amor, Michael D., Norman, Mark D., Roura, Alvaro, Leite, Tatiana S., Gleadall, Ian G., Reid, Amanda, Perales-Raya, Catalina, Lu, Chung-Cheng, Silvey, Colin J., Vidal, Erica A.G., Hochberg, Frederick G., Zheng, Xiaodong, and Strugnell, Jan M. (2016) Morphological assessment of the Octopus vulgaris species-complex evaluated in light of molecular-based phylogenetic inferences. Zoologica Scripta, 46 (3). pp. 275-288.

Andrews, Kimberly R., Williams, Ashley J., Fernandez-Silva, Iria, Newman, Steve J., Copus, Joshua M., Wakefield, Corey B., Randall, John E., and Bowen, Brian W. (2016) Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic. Molecular Phylogenetics and Evolution, 100. pp. 361-371.

Arrigoni, Roberto, Benzoni, Francesca, Huang, Danwei, Fukami, Hironobu, Chen, Chaolun Allen, Berumen, Michael L., Hoogenboom, Mia, Thompson, Damian, Hoeksema, Bert W., Budd, Ann F., Zayasu, Yuna, Terraneo, Tullia I., Kitano, Yuki F., and Baird, Andrew H. (2016) When forms meet genes: revision of the scleractinian genera Micromussa and Homophyllia (Lobophylliidae) with a description of two new species and one new genus. Contributions to Zoology, 85 (4). pp. 387-422.

Abesamis, Rene A., Jadloc, Claro Renato L., and Russ, Garry R. (2015) Varying annual patterns of reproduction in four species of coral reef fish in a monsoonal environment. Marine Biology, 162 (10). pp. 1993-2006.

Anderson, Kristen D., Heron, Scott F., and Pratchett, Morgan S. (2015) Species-specific declines in the linear extension of branching corals at a subtropical reef, Lord Howe Island. Coral Reefs, 34 (2). pp. 479-490.

Atherton, Jennifer Ann, and McCormick, Mark Ian (2015) Active in the sac: damselfish embryos use innate recognition of odours to learn predation risk before hatching. Animal Behaviour, 103. pp. 1-6.

Ainsworth, T.D., Knack, B., Ukani, L., Seneca, F., Weiss, Y., and Leggat, W. (2015) In situ hybridisation detects pro-apoptotic gene expression of a Bcl-2 family member in white syndrome-affected coral. Diseases of Aquatic Organisms, 117 (2). pp. 155-163.

Andrews, Allen H., Choat, John H., Hamilton, Richard J., and DeMartini, Edward E. (2015) Refined bomb radiocarbon dating of two iconic fishes of the Great Barrier Reef. Marine and Freshwater Research, 66 (4). pp. 305-316.

Ainsworth, Tracy D., Krause, Lutz, Bridge, Thomas, Torda, Gergely, Raina, Jean-Baptiste, Zakrzewski, Martha, Gates, Ruth D., Padilla-Gamino, Jacqueline L., Spalding, Heather L., Smith, Celia, Woolsey, Erika S., Bourne, David G., Bongaerts, Pim, Hoegh-Guldberg, Ove, and Leggat, Bill (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 9. pp. 2261-2274.

Atherton, Jennifer Ann (2015) The effect of parental and embryonic predator environments on offspring. PhD thesis, James Cook University.

Allan, Bridie Jean Marie (2015) The effects of climate change on predator-prey interactions in coral reef fish. PhD thesis, James Cook University.

Augé, A.A., Chilvers, B.L., Moore, A.B., and Davis, L.S. (2014) Importance of studying foraging site fidelity for spatial conservation measures in a mobile predator. Animal Conservation, 17 (1). pp. 61-71.

Amor, Michael D., Norman, Mark D., Cameron, Hayley E., and Strugnell, Jan M. (2014) Allopatric speciation within a cryptic species complex of Australasian octopuses. PLoS ONE, 9 (6). e98982. pp. 1-13.

Awruch, Cynthia A., Jones, Susan M., García Asorey, Martin, and Barnett, Adam (2014) Non-lethal assessment of the reproductive status of broadnose sevengill sharks (Notorynchus cepedianus) to determine the significance of habitat use in coastal areas. Conservation Physiology, 2 (1). cou013. pp. 1-14.

Anderson, Kristen D., and Pratchett, Morgan S. (2014) Variation in size-frequency distributions of branching corals between a tropical versus sub-tropical reef. Marine Ecology Progress Series, 502. pp. 117-128.

Almany, Glenn R., Hamilton, Richard J., Bode, Michael, Matawai, Manuai, Potuku, Tapas, Saenz-Agudelo, Pablo, Planes, Serge, Berumen, Michael L., Rhodes, Kevin L., Thorrold, Simon R., Russ, Garry R., and Jones, Geoffrey P. (2013) Dispersal of grouper larvae drives local resource sharing in a coral reef fishery. Current Biology, 23 (7). pp. 626-630.

Albright, Rebecca, and Mason, Benjamin (2013) Projected near-future levels of temperature and pCO2 reduce coral fertilization success. PLoS ONE, 8 (2). e56468. pp. 1-8.

Andrello, Marco, Mouillot, David, Beuvier, Jonathan, Albouy, Camille, Thuiller, Wilfried, and Manel, Stéphanie (2013) Low connectivity between Mediterranean marine protected areas: a biophysical modeling approach for the dusky grouper Epinephelus marginatus. PLoS ONE, 8 (7). e68564. pp. 1-15.

Albouy, Camille, Guilhaumon, François, Leprieur, Fabien, Lasram, Frida Ben Rais, Somot, Samuel, Aznar, Roland, Velez, Laure, Le Loc'h, Francois, and Mouillot, David (2013) Projected climate change and the changing biogeography of coastal Mediterranean fishes. Journal of Biogeography, 40 (3). pp. 534-547.

Augé, Amélie A., Maughan, Mirjam, Pressey, Robert L., Brodie, Jon, Dale, Allan, and Yorkston, Hugh (2013) Spatially explicit scenarios for conservation planning in the Great Barrier Reef coastal zone, Australia. In: Proceedings of the CoastGIS Conference 2013: monitoring and adapting to change on the coast. pp. 179-182. From: CoastGIS 2013: 11th International Symposium for GIS and Computer Cartography for Coastal Zone Management, 18-21 June 2013, Victoria, BC, Canada.

Awruch, C.A., Frusher, S.D., Stevens, J.D., and Barnett, A. (2012) Movement patterns of the draughtboard shark Cephaloscyllium laticeps (Scyliorhinidae) determined by passive tracking and conventional tagging. Journal of Fish Biology, 80 (5). pp. 1417-1435.

A'Hara, S.W., Amouroux, P., Argo, Emily E., Avand-Faghih, A., Barat, Ashoktaru, Barbieri, Luiz, Bert, Theresa M., Blatrix, R., Blin, Aurélie, Bouktila, D., Broome, A., Burban, C., Capdevielle-Dulac, C., Casse, N., Chandra, Suresh, Cho, Kyung Jin, Cottrell, J.E., Crawford, Charles R., Davis, Michelle C., Delatte, H., Desneux, Nicholas, Djieto-Lordon, C., Dubois, M.P., El-Mergawy, R.A.A.M., Gallardo-Escárate, C., Garcia, M., Gardner, Mary M., Guillemaud, Thomas, Haye, P.A., Hellemans, B., Hinrichsen, P., Jeon, Ji Hyun, Kerdelhué, C., Kharrat, I., Kim, Ki Hwan, Kim, Yong Yul, Kwan, Ye-Seul, Labbe, Ellen M., LaHood, Eric, Lee, Kyung Mi, Lee, Wan-Ok, Lee, Yat-Hung, Legoff, Isabelle, Li, H., Lin, Chung-Ping, Liu, S.S., Liu, Y.G., Long, D., Maes, G.E., Magnoux, E., Mahanta, Prabin Chnadra Mahanta, Makni, H., Makni, M., Malausa, Thibaut, Matura, Rakesh, McKey, D., McMillen-Jackson, Anne L., Méndez, M.A., Mezghani-Khemakhem, M., Michel, Andy P., Moran, Paul, Muriel-Cunha, Janice, Nibouche, S., Normand, F., Palkovacs, Eric P., Pande, Veena, Parmentier, K., Peccoud, J., Paitscheck, F., Puchulutegui, Cecilia, Ramos, R., Ravest, G., Richner, Heinz, Robbens, J., Rochat, D., Rousselet, J., Saladin, Verena, Sauve, M., Schlei, Ora, Schultz, Thomas F., Scobie, A.R., Segovia, N.I., Seyoum, Seifu, Silvain, J-F., Tabone, Elisabeth, Van Houdt, J.K.J., Van Damme, S.G., Volckaert, F.A.M., Wenburg, John, Willis, Theodore V., Won, Yong-Jin, Ye, N.H., Zhang, W., and Zhang, Y.X. (2012) Permanent genetic resources added to Molecular Ecology Resources Database 1 August 2011-30 September 2011. Molecular Ecology Resources, 12 (1). pp. 185-189.

Augé, A. A., Davis, L. S., Lalas, C., and Chilvers, B. L. (2012) Autumn diet of recolonising female New Zealand sea lions based at Otago Peninsula, South Island, New Zealand. New Zealand Journal of Marine and Freshwater Research, 46 (1). pp. 97-110.

Albertin, Caroline B., Bonnaud, Laure, Brown, C. Titus, Crookes-Goodson, Wendy J., da Fonseca, Rute R., Di Cristo, Carlo, Dilkes, Brian P., Edsinger-Gonzales, Eric, Freeman, Robert M., Hanlon, Roger T., Koenig, Kristen M., Lindgren, Annie R., Martindale, Mark Q., Minx, Patrick, Moroz, Leonid L., Noedl, Marie-Therese, Nyholm, Spencer V., Ogura, Atsushi, Pungor, Judit R., Rosenthal, Joshua J.C., Schwarz, Erich M., Shigeno, Shuichi, Strugnell, Jan M., Wollesen, Tim, Zhang, Guojie, and Ragsdale, Clifton W. (2012) Cephalopod genomics: a plan of strategies and organization. Standards in Genomic Sciences, 7 (1). pp. 175-188.

Albouy, Camille, Guilhaumon, François, Araujo, Miguel B., Mouillot, David, and Leprieur, Fabien (2012) Combining projected changes in species richness and composition reveals climate change impacts on coastal Mediterranean fish assemblages. Global Change Biology, 18 (10). pp. 2995-3003.

Abrego, David, Willis, Bette L., and van Oppen, Madeleine J.H. (2012) Impact of light and temperature on the uptake of algal symbionts by coral juveniles. PLoS ONE, 7 (11). e50311. pp. 1-9.

Auge, A. A., Moore, A. B., and Chilvers, B. L. (2012) Predicting interactions between recolonising marine mammals and fisheries: defining precautionary management. Fisheries Management and Ecology, 19 (5). pp. 426-433.

Allcock, A. Louise, and Strugnell, Jan M. (2012) Southern Ocean diversity: new paradigms from molecular ecology. Trends in Ecology & Evolution, 27 (9). pp. 520-528.

Aragones, Lemnuel V., Lawler, Ivan, Marsh, Helene, Domning, Daryl, and Hodgson, Amanda (2012) The role of sirenians in aquatic ecosystems. In: Hines, Ellen M., Reynolds III, John E., Aragones, Lemnuel V., Mignucci-Giannoni, Antonio A., and Marmotel, Miriam, (eds.) Sirenian Conservation. University Press of Florida, Florida USA, pp. 4-11.

Albouy, C., Guilhaumon, F., Villeger, S., Mouchet, M., Mercier, L., Culioli, J.M., Tomasini, J.A., Le Loc'h, F., and Mouillot, David (2011) Predicting trophic guild and diet overlap from functional traits: statistics, opportunities and limitations for marine ecology. Marine Ecology Progress Series, 436. pp. 17-28.

Andrello, Marco, Bevacqua, Daniele, Maes, Gregory E., and De Leo, Giulio A. (2011) An integrated genetic-demographic model to unravel the origin of genetic structure in European eel (Anguilla anguilla L.). Evolutionary Applications, 4 (4). pp. 517-533.

Augé, A.A., Chilvers, B.L., Moore, A.B., and Davis, L.S. (2011) Foraging behaviour indicates marginal marine habitat for New Zealand sea lions: remnant versus recolonising populations. Marine Ecology Progress Series, 432. pp. 247-256.

Ateweberhan, M., McClanahan, T.R., Graham, N.A.J., and Sheppard, C.R.C. (2011) Episodic heterogeneous decline and recovery of coral cover in the Indian Ocean. Coral Reefs, 30 (3). pp. 739-752.

Als, Thomas D., Hansen, Michael M., Maes, Gregory E., Castonguay, Martin, Riemann, Lasse, Aarestrup, Kim, Munk, Peter, Sparholt, Henrik, Hanel, Reinhold, and Bernatchez, Louis (2011) All roads lead to home: panmixia of European eel in the Sargasso Sea. Molecular Ecology, 20 (7). pp. 1333-1346.

Aeby, G.S., Bourne, D.G., Wilson, B., and Work, T.M. (2011) Coral diversity and the severity of disease outbreaks: a cross-regional comparison of Acropora White Syndrome in a species-rich region (American Samoa) with a species-poor region (Northwestern Hawaiian Islands). Journal of Marine Biology, 2011. 490198.

Allcock, A. Louise, Barratt, Iain, Eléaume, Marc, Linse, Katrin, Norman, Mark D., Smith, Peter J., Steinke, Dirk, Stevens, Darren W., and Strugnell, Jan M. (2011) Cryptic speciation and the circumpolarity debate: a case study on endemic Southern Ocean octopuses using the COI barcode of life. Deep-Sea Research Part II: topical studies in oceanography, 58 (1-2). pp. 242-249.

Abesamis, Rene A. (2011) Replenishment and connectivity of reef fish populations in the central Philippines. PhD thesis, James Cook University.

Allcock, A. Louise, Cooke, Ira R., and Strugnell, Jan M. (2011) What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda? Zoological Journal of the Linnean Society, 161 (3). pp. 573-586.

Alva-Campbell, Yvette, Floeter, Sergio R., Robertson, D. Ross, Bellwood, David R., and Bernardi, Giacomo (2010) Molecular phylogenetics and evolution of Holacanthus angelfishes (Pomacanthidae). Molecular Phylogenetics and Evolution, 56 (1). pp. 456-461.

Anderson, Cynthia M., Aparicio, Gallego J., Atangana, Alain R., Beaulieu, Jean, Bruford, M.W., Cain, Forrest, Campos, T., Cariani, A., Carvalho, M.A., Chen, Nan, Chen, P.P., Clamens, A-L., Clark, Ann M., Coeur D'Acier, A., Connolly, Paul, Cordero-Rivera, Adolfo, Coughlan, James P., Cross, Thomas S., David, Bruno, De Bruyn, Colin, De Meyer, M., De Ridder, Chantal, Delatte, H., Dettori, M.T., Downer, S.J., Dubreuil, Christine, Evans, K.J., Fan, Bin, Ferrara, G., Gagné, André, Gaillard, Maria, Gigliarelli, L., Giovinazzi, J., Gomez, D.R., Grünwald, N.J., Hansson, Bengt, Huotari, T., Jank, L., Jousselin, E., Jungmann, L., Kaczmarek, M.E., Khasa, Damase P., Kneebone, Jeff, Korpelainen, H., Kostamo, K., Lanfaloni, L., Lin, Haoran, Liu, Xiaochun, Lucentini, L., Maes, G.E., Mahaffee, W.F., Meng, Zining, Micali, S., Milano, I., Mok, H.F., Morin, L., Neill, T.M., Newton, Craig H., Ostrow, D. Gigi, Palomba, A., Panara, F., Puletti, M.E., Quarta, R., Quilici, S., Ramos, A.K.B., Rigaud, Thierry, Risterucci, A.M., Salomon, Matthew P., Sánchez-Guillén, Rosa A., Sarver, Shane K., Sequeira, A.S., Sforça, D.A., Simiand, C., Smith, Brian, Sousa, A.C.B., Souza, A.P., Stepien, C.C., Stuckert, A.J., Sulikowski, James, Tayeh, A., Tinti, F., Tsang, Paul C.W., Van Houdt, J.K.J., Vendramin, E., Verde, I., Virgilio, M., Wang, Huan L., Wang, Le, Wattier, Rémi A., Wellenreuther, Maren, Xie, Cong X., Zane, L., Zhang, Xiu J., Zhang, Yong, Zhuang, Zhimeng, and Zucchi, M.I. (2010) Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2009–31 January 2010. Molecular Ecology Resources, 10 (3). pp. 576-579.

Andersen, S.B, Vestergaard , M.L, Ainsworth, T.D, Hoegh-Guldberg, O., and Kühl, M. (2010) Acute tissue death (white syndrome) affects the microenvironment of tabular Acropora corals. Aquatic Biology, 10 (1). pp. 99-104.

Anthony, Kenneth R.N., Hoogenboom, Mia O., Maynard, Jeffrey A., Grottoli, Andréa G., and Middlebrook, Rachael (2009) Energetics approach to predicting mortality risk from environmental stress: a case study of coral bleaching. Functional Ecology, 23 (3). pp. 539-550.

Adams, Lisa M., Cumbo, Vivian, and Takabayashi, Misaki (2009) Exposure to sediment enhances primary acquisition of Symbiodinium by asymbiotic coral larvae. Marine Ecology Progress Series, 377. pp. 179-156.

Awruch, C.A., Pankhurst, N. W., Frusher , S.D., and Stevens, J. D. (2009) Reproductive seasonality and embryo development in the draughtboard shark Cephaloscyllium laticeps. Marine and Freshwater Research, 60 (12). pp. 1265-1272.

Awruch, Cynthia A., Pankhurst, Ned W., Frusher , Stewart D., and Stevens, John D. (2008) Endocrine and morphological correlates of reproduction in the draughtboard shark Cephaloscyllium laticeps (Elasmobranchii: Scyliorhinidae). Journal of Experimental Zoology, Part A, 309A (4). pp. 184-197.

Anthony, Shelley L., and Thomas, Séverine (2008) Coral Husbandry and Long-Term Coral Survival in the Coral Reef Exhibit at Reef HQ Aquarium, Townsville, Australia. Report. Burgers' Zoo, Arnhem, Netherlands.

Allcock, A. Louise, Strugnell, Jan M., and Johnson, Mark P. (2008) How useful are the recommended counts and indices in the systematics of the Octopodidae (Mollusca : Cephalopoda). Biological Journal of the Linnean Society, 95 (1). pp. 205-218.

Awruch, Cynthia A., Frusher, Stewart D., Pankhurst, Ned W., and Stevens, John D. (2008) Non-lethal assessment of reproductive characteristics for management and conservation of sharks. Marine Ecology Progress Series, 355. pp. 277-285.

Awruch, C. A, Lo Nostro, F.L., Di Giacomo , E., and Somoza, G. (2008) Reproductive biology of the angular angel shark Squatina guggenheim (Chondrichthyes: Squatinidae) off Patagonia (Argentina, southwestern Atlantic). Ciencias Marinas, 34 (1). pp. 17-28.

Abrego, David (2008) Temporal and environmental influences on the early establishment and maintenance of coral-symbiodinium symbioses. PhD thesis, James Cook University.

Almany, Glenn R., Peacock, Lisa F., Syms, Craig, McCormick, Mark I., and Jones, Geoffrey P. (2007) Predators target rare prey in coral reef fish assemblages. Oecologia, 152 (4). pp. 751-761.

Almany, Glenn R. , Berumen, Michael L., Thorrold, Simon R., Planes, Serge, and Jones, Geoffrey P. (2007) Local replenishment of coral reef fish populations in a marine reserve. Science, 316 (5825). pp. 742-744.

Anthony, Kenneth R.N., Connolly, Sean R., and Hoegh-Guldberg, Ove (2007) Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime. Limnology and Oceanography, 52 (2). pp. 716-726.

Allcock, A.L., Strugnell, J.M., Prodöhl, P., Piatkowski, U., and Vecchione, M. (2007) A new species of Pareledone (Cephalopoda : Octopodidae) from Antarctic Peninsula Waters. Polar Biology, 30 (7). pp. 883-893.

Aragones, Lemnuel V., Lawler, Ivan R., Foley, William J., and Marsh, Helene (2006) Dugong grazing and turtle cropping: grazing optimization in tropical seagrass systems? Oecologia, 149 (4). pp. 635-647.

Andrefouet, S., Ouillon, S., Brinkman, R., Falter, J., Douillet, P., Wolk, F., Smith, R., Garen, P., Martinez, E., Laurent, V., Lo, C., Remoissenet, G., Scourzic, B., Gilbert, A., Deleersnijder, E., Steinberg, C., Choukroun, S., and Buestel, D. (2006) Review of solutions for 3D hydrodynamic modeling applied to aquaculture in South Pacific atoll lagoons. Marine Pollution Bulletin, 52 (10). pp. 1138-1155.

Anthony, Kenneth R.N. (2006) Enhanced energy status of corals on coastal, high-turbidity reefs. Marine Ecology Progress Series, 319. pp. 111-116.

Arvedlund, Michael, Iwao, Kenji, Brolund, Thea Marie, and Takemura, Akihiro (2006) Juvenile Thalassoma amblycephalum Bleeker (Labridae, Teleostei) dwelling among the tentacles of sea anemones: a cleanerfish with an unusual client? Journal of Experimental Marine Biology and Ecology, 329 (2). pp. 161-173.

Allcock, A.L., Strugnell, J.M., Ruggiero, H., and Collins, M.A. (2006) Redescription of the deep-sea octopod Benthoctopus normani (Massy 1907) and a description of a new species from the Northeast Atlantic. Marine Biology Research, 2 (6). pp. 372-387.

Arnold , Peter W., Birtles, R. Alastair, Dunstan, Andy , Lukoschek, Vimoksalehi, and Matthews, Monique (2005) Colour patterns of the dwarf minke whale Balaenoptera acutorostrata sensu lato: description, cladistic analysis and taxonomic implications. Memoirs of the Queensland Museum, 51 (2). pp. 277-307.

Arnold, P.W., Birtles, R. A., Sobtzick, S., Matthews, M., and Dunstan, A. (2005) Gulping behaviour in rorqual whales: underwater observations and functional interpretation. Memoirs of the Queensland Museum, 51 (2). pp. 309-332.

Arthur, Rohan, Done, Terence J., and Marsh, Helene (2005) Benthic recovery four years after an El Niño-induced coral mass mortality in the Lakshadweep atolls. Current Science, 89 (4). pp. 694-699.

Andre, Jessica, Gyuris, Emma, and Lawler, Ivan R. (2005) Comparison of the diets of sympatric dugongs and green turtles on the Orman Reefs, Torres Strait, Australia. Wildlife Research, 32 (1). pp. 53-62.

Almany, Glenn R (2004) Differential effects of habitat complexity, predators and competitors on abundance of juvenile and adult coral reef fishes. Oecologia, 141 (1). pp. 105-113.

Allen, Simon, Marsh, Helene, and Hodgson, Amanda (2004) Occurrence and conservation of dugong (Sirenia: Dugongidae) in New South Wales. Linnean Society of New South Wales. Proceedings, 125. pp. 211-216.

Almany, Glenn R., and Webster, Michael S. (2004) Odd species out as predators reduce diversity of coral-reef fishes. Ecology, 85 (11). pp. 2933-2937.

Adams, S. (2003) Morphological ontogeny of the gonad of three plectropomid species through sex differentiation and transition. Journal of Fish Biology, 63 (1). pp. 22-36.

Arango, Claudia Patricia (2002) Morphological and molecular phylogenetic analysis of the sea spiders (Arthropoda, Pycnogonida) and taxonomic study of tropical Australian forms. PhD thesis, James Cook University.

Arvedlund, M., McCormick, M.I., and Ainsworth, T. (2000) Effects of photoperiod on growth of larvae and juveniles of the anemonefish Amphiprion melanopus. Naga - The ICLARM Quarterly , 23 (2). pp. 18-23.

Arango, Claudia (2000) Three species of sea spiders (Pycnogonida) from Santa Marta, Columbian Caribbean. Boletin de Investigaciones Marinas y Costeras, 29. pp. 59-66.

Anthony, Kenneth R.N. (1999) A tank system for studying benthic aquatic organisms at predictable levels of turbidity and sedimentation: case study examining coral growth. Limnology and Oceanography, 44 (6). pp. 1415-1422.

Anthony, Kenneth R.N. (1999) Coral suspension feeding on fine particulate matter. Journal of Experimental Marine Biology and Ecology, 232 (1). pp. 85-106.

Anthony, Kenneth Roald Nies (1999) Sediment: stress factor or food source for reef corals. PhD thesis, James Cook University.

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Bridge, Thomas, Beaman, Robin, Done, Terry, and Webster, Jody (2012) Predicting the location and spatial extent of submerged coral reef habitat in the Great Barrier Reef world heritage area, Australia. PLoS ONE, 7 (10). pp. 1-11.

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Bartlett, Christopher Yeoman (2009) Emergence, evolution and outcomes of marine protected areas in Vanuatu: implications for social-ecological governance. PhD thesis, James Cook University.

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Berumen, Michael L, and Pratchett, Morgan S (2008) Trade-offs associated with dietary specialization in corallivorous butterflyfishes (Chaetodontidae: Chaetodon). Behavioral Ecology and Sociobiology, 62 (6). pp. 989-994.

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Baird, Andrew H., and Kerr, Alexander M. (2008) Landscape analysis and tsunami damage in Aceh: comment on Iverson and Prasad (2007). Landscape Ecology, 23 (1). pp. 3-5.

Bannister, Raymond (2008) The ecology and feeding biology of the sponge Rhopaloeides odorabile. PhD thesis, James Cook University.

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Bannister, R.J., Brinkman, R., Wolff, C., Battershill, C., and de Nys, R. (2007) The distribution and abundance of dictyoceratid sponges in relation to hydrodynamic features: identifying candidates and environmental conditions for sponge aquaculture. Marine and Freshwater Research, 58 (7). pp. 624-633.

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Carlson, John K., and Simpfendorfer, Colin A. (2015) Recovery potential of smalltooth sawfish, Pristis pectinata, in the United States determined using population viability models. Aquatic Conservation: marine and freshwater ecosystems , 25 (2). pp. 187-200.

Correia, M., Caldwell, I.R., Koldewey, H.J., Andrade, J.P., and Palma, J. (2015) Seahorse (Hippocampinae) population fluctuations in the Ria Formosa Lagoon, south Portugal. Journal of Fish Biology, 87 (3). pp. 679-690.

Cohen, Philippa Jane, and Steenbergen, Dirk Johan (2015) Social dimensions of local fisheries co-management in the Coral Triangle. Environmental Conservation, 42 (3). pp. 278-288.

Casey, Jordan Marie (2015) The role of territorial grazers in coral reef trophic dynamics from microbes to apex predators. PhD thesis, James Cook University.

Collier, C.J., and Waycott, M. (2014) Temperature extremes reduce seagrass growth and induce mortality. Marine Pollution Bulletin, 83 (2). pp. 483-490.

Cullen-Unsworth, Leanne C., Nordlund, Lina Mtwana, Paddock, Jessica, Baker, Susan, McKenzie, Len, and Unsworth, Richard K.F. (2014) Seagrass meadows globally as a coupled social–ecological system: implications for human wellbeing. Marine Pollution Bulletin, 83 (2). pp. 387-397.

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Collier, Catherine J., Villacorta-Rath, Cecilia, van Dijk, Kor-jent, Takahashi, Miwa, and Waycott, Michelle (2014) Seagrass proliferation precedes mortality during hypo-salinity events: a stress-induced morphometric response. PLoS ONE, 9 (4). e94014. pp. 1-11.

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Chivers, Douglas P., McCormick, Mark I., Nilsson, Göran E., Munday, Philip L., Watson, Sue-Ann, Meekan, Mark, Mitchell, Matthew D., Corkill, Katherine C., and Ferrari, Maud C.O. (2014) Impaired learning about predators and lower survival under elevated CO2: a consequence of neurotransmitter interference. Global Change Biology, 20 (2). pp. 515-522.

Carlson, J.K., Gulak, S.J.B., Simpfendorfer, C.A., Grubbs, R.D., Romine, J.G., and Burgess, G.H. (2014) Movement patterns and habitat use of smalltooth sawfish, Pristis pectinata, determined using pop-up satellite archival tags. Aquatic Conservation: marine and freshwater ecosystems , 24 (1). pp. 104-117.

Chivers, Douglas P., McCormick, Mark I., Mitchell, Matthew D., Ramasamy, Ryan A., and Ferrari, Maud C.O. (2014) Background level of risk determines how prey categorize predators and non-predators. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1787). pp. 1-6.

Cole, Andrew J., and Pratchett, Morgan S. (2014) Diversity in diet and feeding behaviour of butterflyfishes: reliance on reef corals versus reef habitats. In: Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 107-139.

Carrette, Teresa Jo (2014) Etiology of Irukandji Syndrome with particular focus on the venom ecology and life history of one medically significant carybdeid box jellyfish Alatina moseri. PhD thesis, James Cook University.

Casey, Jordan M., Ainsworth, Tracy D., Choat, J. Howard, and Connolly, Sean R. (2014) Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1788). 20141032. pp. 1-8.

Cowman, Peter F. (2014) Historical factors that have shaped the evolution of tropical reef fishes: a review of phylogenies, biogeography, and remaining questions. Frontiers in Genetics, 5. 394. pp. 1-15.

Chin, Andrew (2014) Hunting porcupines: citizen scientists contribute new knowledge about rare coral reef species. Pacific Conservation Biology, 20 (1). pp. 48-53.

Currey, Leanne M., Heupel, Michelle R., Simpfendorfer, Colin A., and Williams, Ashley J. (2014) Inferring movement patterns of a coral reef fish using oxygen and carbon isotopes in otolith carbonate. Journal of Experimental Marine Biology and Ecology, 456. pp. 18-25.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2014) Multispecies spawning sites for fishes on a low-latitude coral reef: spatial and temporal patterns. Journal of Fish Biology, 84 (4). pp. 1136-1163.

Caballes, Ciemon F., and Pratchett, Morgan S. (2014) Reproductive biology and early life history of the crown-of-thorns starfish. In: Whitmore, Eric, (ed.) Echinoderms: ecology, habitats and reproductive biology. Marine Biology . Nova Science Publishers, New York, NY, USA, pp. 101-146.

Coles, Rob, Short, Fred, Miguel, Fortes, and Kuo, John (2014) Twenty years of seagrass networking and advancing seagrass science: the International Seagrass Biology Workshop Series. Pacific Conservation Biology, 20 (1). pp. 8-16.

Cole, A.J., Lawton, R.J., Pisapia, C., and Pratchett, M.S. (2014) The effects of coral bleaching on settlement preferences and growth of juvenile butterflyfishes. Marine Environmental Research, 98. pp. 106-110.

Cipresso Pereira, Pedro Henrique Cipresso, Moraes, Rodrigo Lima, dos Santos, Marcus Vinicius Bezerra, Lippi, Daniel Lino, Feitosa, João Lucas Leão, and UNSPECIFIED (2014) The influence of multiple factors upon reef fish abundance and species richness in a tropical coral complex. Ichthyological Research, 61 (4). pp. 375-384.

Cumbo, Vivian R., Edmunds, Peter J., Wall, Christopher B., and Fan, Tung-Yung (2013) Brooded coral larvae differ in their response to high temperature and elevated pCO2 depending on the day of release. Marine Biology, 160 (11). pp. 2903-2917.

Curley, B.G., Glasby, T.M., Curley, A.J., Creese, R.G., and Kingsford, M.J. (2013) Enhanced numbers of two temperate reef fishes in a small, partial-take marine protected area related to spearfisher exclusion. Biological Conservation, 167. pp. 435-445.

Chivers, Douglas P., Dixson, Danielle L., White, James R., McCormick, Mark I., and Ferrari, Maud C.O. (2013) Degradation of chemical alarm cues and assessment of risk throughout the day. Ecology and Evolution, 3 (11). pp. 3925-3934.

Cowman, Peter F., and Bellwood, David R. (2013) Vicariance across major marine biogeographic barriers: temporal concordance and the relative intensity of hard versus soft barriers. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1768). 20131541. pp. 1-8.

Cutmore, Scott C., Miller, Terrence L., Curran, Stephen S., Bennett, Michael B., and Cribb, Thomas H. (2013) Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112 (8). pp. 3063-3074.

Curnock, Matthew I., Birtles, R. Alastair, and Valentine, Peter S. (2013) Increased use levels, effort, and spatial distribution of tourists swimming with dwarf minke whales at the Great Barrier Reef. Tourism in Marine Environments, 9 (1-2). pp. 5-17.

Cumbo, V.R., and Baird, A.H. (2013) Chromera velia: Coral symbiont or parasite? Galaxea, Journal of Coral Reef Studies, 15 (1). pp. 15-16.

Cumbo, V.R., Baird, A.H., and Van Oppen, M.J.H. (2013) The promiscuous larvae: flexibility in the establishment of symbiosis in corals. Coral Reefs, 32 (1). pp. 111-120.

Cohen, Yossi, Pollock, F. Joseph, Rosenberg, Eugene, and Bourne, David G. (2013) Phage therapy treatment of the coral pathogen Vibrio coralliilyticus. MicrobiologyOpen, 2 (1). pp. 64-74.

Cowman, Peter F., and Bellwood, David R. (2013) The historical biogeography of coral reef fishes: global patterns of origination and dispersal. Journal of Biogeography, 40 (2). pp. 209-224.

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Chaves, L.T.C., Pereira, P.H.C., and Feitosa, J.L.L. (2013) Coral reef fish association with macroalgal beds on a tropical reef system in North-eastern Brazil. Marine and Freshwater Research, 64 (12). pp. 1101-1111.

Cumbo, Vivian, Fan, T.Y., and Edmunds, P.J. (2013) Effects of exposure duration on the response of Pocillopora damicornis larvae to elevated temperature and high pCO₂. Journal of Experimental Marine Biology and Ecology, 439. pp. 100-107.

Chin, Andrew (2013) Hunting porcupines... Sport Diving Magazine, 160. pp. 48-49.

Chin, A., Tobin, A.J., Heupel, M.R., and Simpfendorfer, C.A. (2013) Population structure and residency patterns of the blacktip reef shark Carcharhinus melanopterus in turbid coastal environments. Journal of Fish Biology, 82 (4). pp. 1192-1210.

Cariglia, Nicoletta, Wilson, Shaun K., Graham, Nicholas A.J., Fisher, Rebecca, Robinson, Jan, Aumeeruddy, Riaz, Quatre, Rodney, and Polunin, Nicholas V.C. (2013) Sea cucumbers in the Seychelles: effects of marine protected areas on high-value species. Aquatic Conservation, 23 (3). pp. 418-428.

Chan, Neil C.S., and Connolly, Sean R. (2013) Sensitivity of coral calcification to ocean acidification: a meta-analysis. Global Change Biology, 19 (1). pp. 282-290.

Coker, Darren J., Walker, Stefan P.W., Munday, Philip L., and Pratchett, Morgan S. (2013) Social group entry rules may limit population resilience to patchy habitat disturbance. Marine Ecology Progress Series, 493. pp. 237-242.

Chin, Andrew, Simpfendorfer, Colin, Tobin, Andrew, and Heupel, Michelle (2013) Validated age, growth and reproductive biology of Carcharhinus melanopterus, a widely distributed and exploited reef shark. Marine and Freshwater Research, 64 (10). pp. 965-975.

Chin, Andrew (2013) The biology and ecology of the blacktip reef shark Carcharhinus melanopterus (Quoy & Gaimard, 1824) and implications for management. PhD thesis, James Cook University.

Cumbo, V.R., Fan, T.-Y., and Edmunds, P.J. (2012) Scleractinian corals capture zooplankton within days of settlement and metamorphosis. Coral Reefs, 31 (4). p. 1155.

Chong-Seng, Karen M., Mannering, Thomas D., Pratchett, Morgan S., Bellwood, David R., and Graham, Nicholas A.J. (2012) The influence of coral reef benthic condition on associated fish assemblages. PLoS ONE, 7 (8). e42167. pp. 1-10.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2012) Influence of coral bleaching, coral mortality and conspecific aggression on movement and distribution of coral-dwelling fish. Journal of Experimental Marine Biology and Ecology, 414-415. pp. 62-68.

Ceh, Janja, Raina, Jean-baptiste, Soo, Rochelle M., van Keulen, Mike, and Bourne, David G. (2012) Coral-bacterial communities before and after a coral mass spawning event on Ningaloo Reef. PLoS One, 7 (5). pp. 1-7.

Carranza, Alvar, Munoz Recio, Araceli, Kitahara, Marcelo, Scarabino, Fabrizio, Ortega, Leonardo, Lopez, Guzman, Franco-Fraguas, Paula, De Mello, Camila, Acosta, Juan, and Fontan, Antia (2012) Deep-water coral reefs from the Uruguayan outer shelf and slope. Marine Biodiversity, 42 (3). pp. 411-414.

Connolly, S.R., Lopez-Yglesias, M.A., and Anthony, K.R.N. (2012) Food availability promotes rapid recovery from thermal stress in a scleractinian coral. Coral Reefs, 31 (4). pp. 951-960.

Coker, D.J., Graham, N.A.J., and Pratchett, M.S. (2012) Interactive effects of live coral and structural complexity on the recruitment of reef fishes. Coral Reefs, 31 (4). pp. 919-927.

Cumbo, V.R., Fan, T.-Y., and Edmunds, P.J (2012) Physiological development of brooded larvae from two pocilloporid corals in Taiwan. Marine Biology, 159 (12). pp. 2853-2866.

Ceccarelli, D.M., and Williamson, D.H. (2012) Sharks that eat sharks: opportunistic predation by wobbegongs. Coral Reefs, 31 (2). p. 471.

Cowman, P.F., and Bellwood, D.R. (2011) Coral reefs as drivers of cladogenesis: expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots. Journal of Evolutionary Biology, 24 (12). pp. 2543-2562.

Ceccarelli, D.M., Richards, Z.T., Pratchett, M.S., and Cvitanovic, C. (2011) Rapid increase in coral cover on an isolated coral reef, the Ashmore Reef National Nature Reserve, north-western Australia. Marine and Freshwater Research, 62 (10). pp. 1214-1220.

Cuveliers, E.L., Volckaert, F.A.M., Rijnsdorp, A.D., Larmuseau, M.H.D., and Maes, G.E. (2011) Temporal genetic stability and high effective population size despite fisheries-induced life-history trait evolution in the North Sea sole. Molecular Ecology, 20 (17). pp. 3555-3568.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Cavalcante, Geórgenes H. , Kjerfve, Björn, Feary, David A., Bauman, Andrew G., and Usseglio, Paolo (2011) Water Currents and Water Budget in a Coastal Megastructure, Palm Jumeirah Lagoon, Dubai, UAE. Journal of Coastal Research, 27 (2). pp. 384-393.

Coles, Rob, Grech, Alana, Rasheed, Mike, McKenzie, Len, Unsworth, Richard, and Short, Fred (2011) Seagrass ecology and threats in the tropical Indo-Pacific bioregion. In: Pirog, Robert S., (ed.) Seagrass: Ecology Uses and Threats. Oceanography and Ocean Engineering . Nova Science Publishers, New York, NY, USA, pp. 225-239.

Chen, Kao-Song, Hsieh, Hernyi Justin, Keshavmurthy, Shashank, Leung, Julia Ka Lai, Lien, I-Ting, Nakano, Yoshikatsu, Plathong, Sakanan, Huang, Hui, and Chen, Chaolun Allen (2011) Latitudinal gradient of morphological variations in zebra coral Oulastrea crispata (Scleractinia: Faviidae) in the West Pacific. Zoological Studies, 50 (1). pp. 43-52.

Cowman, Peter Francis (2011) Dating the evolutionary origins of coral reef fishes. PhD thesis, James Cook University.

Cole, A.J., and Pratchett, M.S. (2011) Effects of juvenile coral-feeding butterflyfishes on host corals. Coral Reefs, 30 (3). pp. 623-630.

Curnock, Matthew, Birtles, Alastair, and Valentine, Peter (2011) Mechanisms for assessing the sustainability of swim-with-whales tourism in the Great Barrier Reef. In: 3rd Australian National Network in Marine Science Conference. pp. 1-5. From: 3rd Australian National Network in Marine Science Conference, 29 November - 1 December 2011, Perth. (Unpublished)

Chambers, Lynda E., Devney, Carol A., Congdon, Bradley C., Dunlop, Nic, Woehler, Eric J., and Dann, Peter (2011) Observed and predicted effects of climate on Australian seabirds. Emu, 111 (3). pp. 235-251.

Cole, A.J. (2010) Cleaning to corallivory: ontogenetic changes in feeding behaviour of tubelip wrasse. Coral Reefs, 29 (1). pp. 125-129.

Cuveliers, E.L., Geffen, A.J., Guelinckx, J., Raeymaekers, J.A.M., Skadal, J., Volckaert, F.A.M., and Maes, G.E. (2010) Microchemical variation in juvenile Solea solea otoliths as a powerful tool for studying connectivity in the North Sea. Marine Ecology Progress Series, 401. pp. 211-220.

Cappo, Mike (2010) Development of a baited video technique and spatial models to explain patterns of fish biodiversity in inter-reef waters. PhD thesis, James Cook University.

Connolly, Sean R., and Baird, Andrew H. (2010) Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals. Ecology, 91 (12). pp. 3572-3583.

Collins, Martin A., Laptikhovsky, Vladimir, and Strugnell, Jan M. (2010) Expanded description of Opisthoteuthis hardyi based on new specimens from the Patagonian slope. Journal of the Marine Biological Association of the United Kingdom, 90 (3). pp. 605-611.

Curnock, Matthew I. (2010) Mechanisms for assessing the sustainability of swimming-with-whales tourism in the Great Barrier Reef. PhD thesis, James Cook University.

Coppe, Alessandro, Pujolar, Jose Martin, Maes, Gregory E., Larsen, Peter F., Hansen, Michael M., Bernatchez, Louis, Zane, Lorenzo, and Bortoluzzi, Stefania (2010) Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered european eel. BMC Genomics, 11. 635. pp. 1-13.

Cowman, Peter F., Bellwood, David R., and van Herwerden, Lynne (2009) Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Molecular Phylogenetics and Evolution, 52 (3). pp. 621-631.

Cinner, Joshua, Fuentes, Mariana M.P.B., and Randriamahazo, Herilala (2009) Exploring social resilience in Madagascar’s marine protected areas. Ecology and Society, 14 (1). .

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Effects of coral bleaching on the feeding response of two species of coral-feeding fish. Journal of Experimental Marine Biology and Ecology, 373. pp. 11-15.

Cuveliers, E.L., Bolle, L.J., Volckaert, F.A.M., and Maes, G.E. (2009) Influence of DNA isolation from historical otoliths on nuclear–mitochondrial marker amplification and age determination in an overexploited fish, the common sole (Solea solea L.). Molecular Ecology Resources, 9 (3). pp. 725-732.

Curnock, Matthew, Birtles, Alastair, and Valentine, Peter (2009) Key steps towards adaptive management of a whalewatching industry: developing sustainability objectives and indicators for the swimming-with-dwarf minke whales activity in the Great Barrier Reef. In: 18th Biennial Conference on the Biology of Marine Mammals. p. 1. From: 18th Biennial Conference on the Biology of Marine Mammals, 12-16 October 2009, Quebec. (Unpublished)

Curley, Belinda G., and Gillings, Michael R. (2009) Population connectivity in the temperate damselfish Parma microlepis: analyses of genetic structure across multiple spatial scales. Marine Biology, 156 (3). pp. 381-393.

Connolly, Sean R, Dornelas, Maria, Bellwood, David R., and Hughes, Terence P (2009) Testing species abundance models: a new bootstrap approach applied to Indo-Pacific coral reefs. Ecology, 90 (11). pp. 3138-3149.

Cleary, Daniel FR, De Vantier, Lyndon, Giyanto, , Vail, Lyle, Manto, Philip, de Voogd, Nicole J, Rachello-Dolmen, Paola G, Tuti, Yosephine, Budiyanto, Agus, Wolstenholme, Jackie, Hoeksema, Bert W, and Suharsono, (2008) Relating variation in species composition to environmental variables: a multi-taxon study in an Indonesian coral reef complex. Aquatic Sciences, 70 (4). pp. 419-431.

Cooper, Timothy F., De'Ath, Glenn, Fabricius, Katharina E., and Lough, Janice M. (2008) Declining coral calcification in massive Porites in two nearshore regions of the northern Great Barrier Reef. Global Change Biology, 14 (3). pp. 529-538.

Chin, Andrew, Sweatman, Hugh, Forbes, Susan, Perks, Helen, Walker, Ryan, Jones, Geoff, Williamson, David, Evans, Richard, Hartley, Fraser, Armstrong, Shannon, Malcolm, Hamish, and Edgar, Graham (2008) 2008 Status of the coral reefs in Australia and Papua New Guinea. In: Wilkinson, Clive, (ed.) Status of Coral Reefs of the World: 2008. Global Coral Reef Monitoring Network, Townsville, QLD, Australia, pp. 159-176.

Cantin, Neal (2008) Chronic effects of herbicide exposure on photosynthesis, symbiosis and reproduction of reef building corals. PhD thesis, James Cook University.

Curnock, Matthew, Birtles, Alastair, and Valentine, Peter (2008) Developing sustainability objectives and indicators for swim-with-minke whales tourism in the Great Barrier Reef. In: CAUTHE 2008 Conference. pp. 1-5. From: CAUTHE 2008 Conference: Tourism and Hospitality Research , Training and Practice, 11-14 Feb,2008, Gold Coast, QLD, Australia.

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Choat, J.H., and Russell, B.C. (2008) The fish assemblages of the Great Barrier Reef: their diversity and origin. In: Hutchings, Pat , Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 327-342.

Carruthers, T.J.B., Dennison, W.C., Kendrick, G.A., Waycott, M., Walker, D.I., and Cambridge, M.L. (2007) Seagrasses of south-west Australia: A conceptual synthesis of the world's most diverse and extensive seagrass meadows. Journal of Experimental Marine Biology and Ecology, 350 (1-2). pp. 21-45.

Congdon, Bradley C., Erwin, Carol A., Peck, Darren R., Baker, G. Barry, Double, Michael C., and O'Neill, Paul (2007) Vulnerability of seabirds on the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 427-464.

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Chin, A., and Burgess, G.H. (2006) Zameus squamulosus. The IUCN Red List of Threatened Species. T60215A12322535.

Clarke, Cathryn L. (2006) The population dynamics and feeding preferences of Bursatella leachii (Opisthobranchia: Anaspidea) in northeast Queensland, Australia. Records of the Western Australian Museum: supplements, 69. pp. 11-21.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Effects of territorial damselfish on an algal-dominated coastal coral reef. Coral Reefs, 24 (4). pp. 606-620.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Foragers versus farmers: contrasting effects of two behavioural groups of herbivores on coral reefs. Oecologia, 145 (3). pp. 445-453.

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Caley, M. Julian, and Schluter, Dolph (2003) Predators favour mimicry in a tropical reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 270 (1516). pp. 667-672.

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Hobbs, J.-P.A., Frisch, A.J., Mutz, S., and Ford, B.M. (2014) Evaluating the effectiveness of teeth and dorsal fin spines for non-lethal age estimation of a tropical reef fish, coral trout Plectropomus leopardus. Journal of Fish Biology, 84 (2). pp. 328-338.

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Hadfield, Kerry A., Bruce, Niel L., Szinetár, Csaba, and Smit, Nico J. (2014) Ceratothoa retusa (Schiœdte & Meinert, 1883) (Isopoda, Cymothoidae), a variable species of fish parasitic marine isopod from the Indian Ocean. Crustaceana, 87 (4). pp. 448-462.

Hobbs, Jean-Paul A., Newman, Stephen J., Mitsopoulos, Gabby E.A., Travers, Michael J., Skepper, Craig L., Gilligan, Justin J., Allen, Gerald R., Choat, Howard J., and Ayling, Anthony M. (2014) Checklist and new records of Christmas Island fishes: the influence of isolation, biogeography and habitat availability on species abundance and community composition. Raffles Bulletin of Zoology, Supplement No. 30. pp. 184-202.

Hobbs, Jean-Paul A., van Herwerden, Lynne, Pratchett, Morgan S., and Allen, Gerald R. (2014) Hybridisation among butterflyfishes. In: Pratchett , Morgan S., Berumen , Michael L., and Kapoor , B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 48-69.

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Horne, John B., Momigliano, Paolo, van Herwerden, Lynne, and Newman, Stephen J. (2013) Murky waters: searching for structure in genetically depauperate blue threadfin populations of Western Australia. Fisheries Research, 146. pp. 1-6.

Hobbs, Jean-Paul A., Frisch, Ashley J., Ford, Benjamin M., Thums, Michele, Saenz-Agudelo, Pablo, Furby, Kathryn A., and Berumen, Michael L. (2013) Taxonomic, spatial and temporal patterns of bleaching in anemones inhabited by anemonefishes. PLoS ONE, 8 (8). e70966. pp. 1-12.

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Hyžný, Matúš, Bruce, Niel L., and Schlöegl, Jan (2013) An appraisal of the fossil record for the Cirolanidae (Malacostraca: Peracarida: Isopoda: Cymothoida), with a description of a new cirolanid isopod crustacean from the early Miocene of the Vienna Basin (Western Carpathians). Palaeontology, 56 (3). pp. 615-630.

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Hazel, Julia, Hamann, Mark, and Lawler, Ivan R. (2013) Home range of immature green turtles tracked at an offshore tropical reef using automated passive acoustic technology. Marine Biology, 160 (3). pp. 617-627.

Harris, Peter T., Bridge, Thomas C.L., Beaman, Robin J., Webster, Jody M., Nichol, Scott L., and Brooke, Brendan P. (2013) Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat. ICES Journal of Marine Science, 70 (2). pp. 284-293.

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Hartley, Fraser Andrew (2013) Fear of fishers: anti-predator behaviour of coral reef fish and its relevance to fisheries management and conservation. PhD thesis, James Cook University.

Hobbs, Jean-Paul, van Herwerden, Lynne, Jerry, Dean R., Jones, Geoffrey P., and Munday, Philip L. (2013) High genetic diversity in geographically remote populations of endemic and widespread coral reef angelfishes (genus: Centropyge). Diversity, 5 (1). pp. 39-50.

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Hughes, Terry (2011) The future of marine governance. Solutions, 2 (1). pp. 1-3.

Huang, Danwei, Licuanan, Wilfredo Y., Baird, Andrew H. , and Fukami, Hironobu (2011) Cleaning up the 'Bigmessidae': molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae and Trachyphylliidae. BMC Evolutionary Biology, 11. 37. pp. 1-13.

Horne, John Barton (2011) Evolutionary and ecological genetic patterns of widespread unicornfishes: investigations of the non-geographic clades phenomenon. PhD thesis, James Cook University.

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Hagihara, Rie, Jones, Rhondda, Sheppard, James, Hodgson, Amanda, and Marsh, Helene (2011) Minimizing errors in the analysis of dive recordings from shallow-diving animals. Journal of Experimental Marine Biology and Ecology, 399 (2). pp. 173-181.

Hamann, Mark, Grech, Alana, Wolanski, Eric, and Lambrechts, Jonathan (2011) Modelling the fate of marine turtle hatchlings. Ecological Modelling, 222 (8). pp. 1515-1521.

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Hobbs, Jean-Paul A. (2011) Reef fishes on isolated islands: community structure, endemism and extinction. PhD thesis, James Cook University.

Hughes, T.P., Bellwood, D.R., Baird, A.H., Brodie, J., Bruno, J.F., and Pandolfi, J.M. (2011) Shifting base-lines, declining coral cover, and the erosion of reef resilience: comment on Sweatman et al. (2011). Coral Reefs, 30 (3). pp. 653-660.

Hobbs, J.-P. A., and McDonald, C.A. (2010) Increased seawater temperature and decreased dissolved oxygen triggers fish kill at the Cocos (Keeling) Islands, Indian Ocean. Journal of Fish Biology, 77 (6). pp. 1219-1229.

Hoogenboom, Mia, Rodolfo-Metalpa, Riccardo, and Ferrier-Pagès, Christine (2010) Co-variation between autotrophy and heterotrophy in the Mediterranean coral Cladocora caespitosa. Journal of Experimental Biology, 213 (14). pp. 2399-2409.

Hobbs, Jean-paul, and Van Herwerden, Lynne (2010) Evolutionary novelty at range edges for coral reef organisms. Science, 328 (5985). p. 1558.

Hutchinson, N., and Rhodes, K.L. (2010) Home range estimates for squaretail coralgrouper, Plectropomus areolatus (Rüppell 1830). Coral Reefs, 29 (2). pp. 511-519.

Hutchinson, Neil, Hunt, Taylor, and Morris, Liz (2010) Seagrass and Reef Program for Port Phillip Bay: temperate reefs literature review. Report. Victorian Department of Primary Industries, Melbourne, VIC, Australia.

Hobbs, Jean-Paul A., Ayling, Anthony, Choat, J. Howard, Gilligan, Justin J., McDonald, Christian A., Neilson, Joseph, and Newman, Stephen J. (2010) New records of marine fishes illustrate the biogeographic importance of Christmas Island, Indian Ocean. Zootaxa, 2422. pp. 63-68.

Hobbs, Jean-Paul, and Frisch, Ashley J. (2010) Coral disease in the Indian Ocean: taxonomic susceptibility, spatial distribution and the role of host density on the prevalence of white syndrome. Diseases of Aquatic Organisms, 89 (1). pp. 1-8.

Holmes, Thomas H., and McCormick, Mark I. (2010) Size-selectivity of predatory reef fish on juvenile prey. Marine Ecology Progress Series, 399. pp. 273-283.

Halford, Andrew Robert (2010) Disturbance effects on tropical reef fish assemblages at large spatial and temporal scales. PhD thesis, James Cook University.

Hamann, M., Godfrey, M.H., Seminoff, J.A., Arthur, K., Barata, P.C.R., Bjorndal, K.A., Bolten, A.B., Broderick, A.C., Campbell, L.M., Carreras, C., Casale, P., Chaloupka, M., Chan, S.K.F, Coyne, M.S., Crowder, L.B., Diez, C.E., Dutton, P.H., Epperly, S.P., FitzSimmons, N.N., Formia, A., Girondot, M., Hays, G.C., Cheng, I.J., Kaska, Y., Lewison, R., Mortimer, J.A., Nichols, W.J., Reina, R.D., Shanker, K., Spotila, J.R., Tomás, J., Wallace, B.P., Work, T.M., Zbinden, J., and Godley, B.J. (2010) Global research priorities for sea turtles: informing management and conservation in the 21st century. Endangered Species Research, 11 (3). pp. 245-269.

Hazevoet, Cornelis J., Monteiro, Vanda, López, Pedro, Varo, Nuria, Torda, Gergely, Berrow, Simon, and Gravanita, Barbara (2010) Recent data on whales and dolphins (Mammalia: Cetacea) from the Cape Verde Islands, including records of four taxa new to the archipelago. Zoologia Caboverdiana, 1 (2). pp. 75-99.

Hoogenboom, M., Beraud, E., and Ferrier-Pagès, C. (2010) Relationship between symbiont density and photosynthetic carbon acquisition in the temperate coral Cladocora caespitosa. Coral Reefs, 29 (1). pp. 21-29.

Holmes, Thomas H., and McCormick, Mark I. (2010) Smell, learn and live: the role of chemical alarm cues in predator learning during early life history in a marine fish. Behavioural Processes, 83 (3). pp. 299-305.

Hoey, Andrew Scott (2010) The ecosystem role of macroalgal browsing fishes on coral reefs. PhD thesis, James Cook University.

Hoogenboom, Mia O., Connolly, Sean R., and Anthony, Kenneth R.N. (2009) Effects of photoacclimation on the light niche of corals: a process-based approach. Marine Biology, 156 (12). pp. 2493-2503.

Hobbs, J-P.A., Frisch, A.J., Hamanaka, T., McDonald, C.A., Gilligan, J.J., and Neilson, J. (2009) Seasonal aggregation of juvenile whale sharks (Rhincodon typus) at Christmas Island, Indian Ocean. Coral Reefs, 28 (3). p. 577.

Hughes, Terry (2009) Confronting the global decline of coral reefs. In: Duarte, Carlos M., (ed.) Global Loss of Coastal Habitats: rates, causes and consequences. BBVA Foundation, Madrid, pp. 140-166.

Hazel, Julia (2009) Evaluation of fast-acquisition GPS in stationary tests and fine-scale tracking of green turtles. Journal of Experimental Marine Biology and Ecology, 374 (1). pp. 58-68.

Hazel, Julia, Lawler, Ivan R., and Hamann, Mark (2009) Diving at the shallow end: green turtle behaviour in near-shore foraging habitat. Journal of Experimental Marine Biology and Ecology, 371 (1). pp. 84-92.

Hobbs, Jean-Paul A., Frisch, Ashley J., Allen, Gerald R., and van Herwerden, Lynne (2009) Marine hybrid hotspot at Indo-Pacific biogeographic border. Biology Letters, 5 (2). pp. 258-261.

Hoogenboom, Mia O., and Connolly, Sean R. (2009) Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow. Ecology, 90 (3). pp. 767-780.

Holmes, Thomas H., and McCormick, Mark I. (2009) Influence of prey body characteristics and performance on predator selection. Oecologia, 159 (2). pp. 401-413.

Hernaman, V., Probert, P.K., and Robbins, W.D. (2009) Trophic ecology of coral reef gobies: interspecific, ontogenetic, and seasonal comparison of diet and feeding intensity. Marine Biology, 156 (3). pp. 317-330.

Holmes, Thomas (2009) Processes and mechanisms of predatory interactions on newly settled reef fish. PhD thesis, James Cook University.

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Hughes, Terry (2009) Two degrees from disaster. Sustainability: Australia's Future, 1 (1). pp. 58-60.

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Lukoschek, Vimoksalehi, and Shine, Richard (2012) Sea snakes rarely venture far from home. Ecology and Evolution, 2 (6). pp. 1113-1121.

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Lukoschek, Vimoksalehi, and Avise, John C. (2011) Genetic monandry in 6 viviparous species of true sea snakes. Journal of Heredity, 102 (3). pp. 347-351.

Lawton, Rebecca J., Pratchett, Morgan S., and Bay, Line K. (2011) Cross-species amplification of 44 microsatellite loci developed for Chaetodon trifascialis, C. lunulatus and C. vagabundus in 22 related butterflyfish species. Molecular Ecology Resources, 11 (2). pp. 323-327.

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Lawton, R.J., Wing, S.R., and Lewis, A.M. (2010) Evidence for discrete subpopulations of sea perch (Helicolenus ercoides) across four fjords in Fiordland, New Zealand. New Zealand Journal of Marine and Freshwater Research, 44 (4). pp. 309-322.

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Lemberget, Tove, and McCormick, Mark I. (2009) Replenishment success linked to fluctuating asymmetry in larval fish. Oecologia, 159 (1). pp. 83-93.

Lukoschek, V., Waycott, M., and Keogh, J.S. (2008) Relative information content of polymorphic microsatellites and mitochondrial DNA for inferring dispersal and population genetic structure in the olive sea snake, Aipysurus laevis. Molecular Ecology, 17 (13). pp. 3062-3077.

Limbourn, Andrew, Jones, Geoffrey, Munday, Philip, and Srinivasan, Maya (2007) Niche shifts and local competition between two coral reef fishes at their geographic boundary. Marine and Freshwater Research, 58 (12). pp. 1120-1129.

Ledlie, M., Graham, N. A. J., Bythell, J. C., Wilson, S. K., Jennings, S., Polunin, N. V. C., and Hardcastle, J. (2007) Phase shifts and the role of herbivory in the resilience of coral reefs. Coral Reefs, 26 (3). pp. 641-653.

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Lukoschek, Vimoksalehi, and McCormick, Mark I. (2001) Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection. Marine Biology, 138 (6). pp. 1099-1113.

Light, Phillip Richard (1995) The early life history of coral trout (Plectropomus leopardus) at Green and Arlington reefs, Australia. PhD thesis, James Cook University of North Queensland.

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Ludvianto, Bayu (1992) A study on the biology of Osangularia cf. venusta (Brady): an epiphytic foraminifera on the intertidal seagrass Halodule uninervis in Shelly Bay, Townsville, North Queensland. PhD thesis, James Cook University of North Queensland.

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Mejias-Balsalobre, Carmen, Restrepo, Jamie, Borges, Gilberto, Garcia, Raul, Rojas-Cañizales, Daniela, Barrios-Garrido, Hector, and Valverde, Roldan A. (2021) Local community perceptions of sea turtle egg use in Tortuguero, Costa Rica. Ocean & Coastal Management, 201. 105423.

McNeil, Mardi A., Nothdurft, Luke D., Dryriw, Nicholas J., Webster, Jody M., and Beaman, Robin J. (2021) Morphotype differentiation in the Great Barrier Reef Halimeda bioherm carbonate factory: internal architecture and surface geomorphometrics. The Depositional Record, 7 (2). pp. 176-199.

MacKeracher, Tracy, Mizrahi, Me'ira, Bergseth, Brock, Chit Maung, Khin May, Khine, Zin Lin, Phyu, Ei Thal, Simpfendorfer, Colin A., and Diedrich, Amy (2021) Understanding non-compliance in small-scale fisheries: shark fishing in Myanmar's Myeik Archipelago. Ambio, 50. pp. 572-585.

Miller, Michaela E., Hamann, Mark, and Kroon, Frederieke J. (2020) Bioaccumulation and biomagnification of microplastics in marine organisms: a review and meta-analysis of current data. PLoS ONE, 15 (10). e0240792.

Martins, A. P. B., Heupel, M. R., Bierwagen, S. L., Chin, A., and Simpfendorfer, C. (2020) Diurnal activity patterns and habitat use of juvenile Pastinachus ater in a coral reef flat environment. PLoS ONE, 15 (2). e0228280.

Munroe, Samantha E.M., Rigby, Cassandra L., and Hussey, Nigel E. (2020) Evidence for inter- and intraspecific trophic niche separation among deepwater elasmobranchs on the southern Great Barrier Reef, Australia. Marine Ecology Progress Series, 636. pp. 107-121.

Morais, Renato A., Connolly, Sean R., and Bellwood, David R. (2020) Human exploitation shapes productivity–biomass relationships on coral reefs. Global Change Biology, 26 (3). pp. 1295-1305.

McKenzie, Len J., and Yoshida, Rudi L. (2020) Over a decade monitoring Fiji's seagrass condition demonstrates resilience to anthropogenic pressures and extreme climate events. Marine Pollution Bulletin, 160. 111636.

Maxwell, Stephen J., Rowell, Misha K., Hernandez Duran, Linda C., and Rymer, Tasmin L. (2020) Population structure of Canarium labiatum (Röding, 1798) (Mollusca: Neostromboidae: Strombidae) on Green Island, Great Barrier Reef, Queensland. Proceedings of the Royal Society of Queensland, 128. pp. 13-20.

Morais, Renato A., and Bellwood, David R. (2020) Principles for estimating fish productivity on coral reefs. Coral Reefs, 39. pp. 1221-1231.

Morais, Renato A., Depczynski, Martial, Fulton, Christopher, Marnane, Michael, Narvaez, Pauline, Huertas, Victor, Brandl, Simon J., and Bellwood, David R. (2020) Severe coral loss shifts energetic dynamics on a coral reef. Functional Ecology, 34 (7). pp. 1507-1518.

Miller, Rachel Lynn, Marsh, Helene, Benham, Claudia, and Hamann, Mark (2020) Stakeholder engagement in the governance of marine migratory species: barriers and building blocks. Endangered Species Research, 43. pp. 1-19.

Maxwell, Stephen J., Rymer, Tasmin L., Congdon, Bradley C., and Dekkers, Aart M. (2020) Studies in Canarium urceus (Linné, 1758) Part 2: Strombus anatellus Duclos, 1844, Strombus crassilabrum Anton, 1839, Strombus incisus Wood, 1828 and Strombus ustulatus form laevis Dodge, 1946 (Neostromboidae: Strombidae). The Festivus, 52 (4). pp. 335-344.

Maxwell, Stephen J., Dekkers, Aart M., Rymer, Tasmin L., and Congdon, Brad C. (2020) Towards resolving the American and West African Strombidae (Mollusca: Gastropoda: Neostromboidae) using integrated taxonomy. The Festivus, 52 (1). pp. 3-38.

Martins, A. P. B., Heupel, M. R., Oakley-Cogan, A., Chin, A., and Simpfendorfer, C. (2020) Towed-float GPS telemetry: a tool to assess movement patterns and habitat use of juvenile stingrays. Marine and Freshwater Research, 71 (1). pp. 89-98.

Mustika, Putu Liza Kusuma, Ichsan, Muhammad, and Booth, Hollie (2020) The economic value of shark and ray tourism in Indonesia and its role in delivering conservation outcomes. Frontiers in Marine Science, 7. 261.

McKenzie, Len J, Nordlund, Lina M., Jones, Benjamin L., Cullen-Unsworth, Leanne C., Roelfsema, Chris, and Unsworth, Richard K.F. (2020) The global distribution of seagrass meadows. Environmental Research Letters, 15 (7). 074041.

Morais Araujo, Renato (2020) The productivity of coral reef fishes. PhD thesis, James Cook University.

McClure, Eva C., Richardson, Laura E., Graba-Landry, Alexia, Loffler, Zoe, Russ, Garry R., and Hoey, Andrew S. (2019) Cross-shelf differences in the response of herbivorous fish assemblages to severe environmental disturbances. Diversity, 11 (2). 23.

Mihalitsis, Michalis, and Bellwood, David (2019) Functional implications of dentition-based morphotypes in piscivorous fishes. Royal Society Open Science, 6 (9). 190040.

Mizrahi, Me'ira, Duce, Stephanie, Pressey, Robert L., Simpfendorfer, Colin A., Weeks, Rebecca, and Diedrich, Amy (2019) Global opportunities and challenges for shark large marine protected areas. Biological Conservation, 234. pp. 107-115.

Maxwell, Stephen J., Dekkers, Aart M., Rymer, Tasmin L., and Congdon, Bradley C. (2019) Laevistrombus Abbott 1960 (Gastropoda: Strombidae): Indian and southwest Pacific species. Zootaxa, 4555 (4). pp. 491-506.

Mihalitsis, Michalis, and Bellwood, David R. (2019) Morphological and functional diversity of piscivorous fishes on coral reefs. Coral Reefs, 38 (5). pp. 945-954.

McClure, Eva Claire (2019) No-take marine reserve performance under varying environmental and anthropogenic influences. PhD thesis, James Cook University.

Maxwell, Stephen J., Dekkers, Art M., Rymer, Tasmin L., and Congdon, Bradley C. (2019) Recognising and defining a new crown clade within Stromboidea Rafinesque, 1815 (Mollusca, Gastropoda). ZooKeys, 867. pp. 1-7.

Maire, Eva (2019) Socio-ecological drivers of fish biomass on coral reefs: the importance of accessibility, protection and key species. PhD thesis, James Cook University.

Maxwell, Stephen J., Bordon, Anton V., Rymer, Tasmin L., and Congdon, Brad C. (2019) The birth of a species and the validity of hybrid nomenclature demonstrated with a revision of hybrid taxa within Strombidae (Neostromboidae). Proceedings of the Biological Society of Washington, 132 (1). pp. 119-130.

Maxwell, Stephen, and Dekkers, Aart (2019) A new name for Altivasum typicum Hedley,1916 fide Dekkers and Maxwell, 2018 and the description of Altivasum clarksoni n. sp. The Festivus, 51 (3). pp. 171-176.

Matis, Paloma A., Donelson, Jennifer M., Bush, Stephen, Fox, Rebecca J., and Booth, David J. (2018) Temperature influences habitat preference of coral reef fishes: will generalists become more specialised in a warming ocean? Global Change Biology, 24 (7). pp. 3158-3169.

Miller, Mark G.R., Carlile, Nicholas, Phillips, Joe Scutt, McDuie, Fiona, and Congdon, Bradley C. (2018) The importance of tropical tuna for seabirds foraging over a marine productivity gradient. Marine Ecology Progress Series, 586. pp. 233-249.

Martins, A.P.B, Heupel, M. R., Chin, A., and Simpfendorfer, C. A. (2018) Batoid nurseries: definition, use and importance. Marine Ecology - Progress Series, 595. pp. 253-267.

McCormick, Mark I., Fakan, Eric, and Allan, Bridie J.M. (2018) Behavioural measures determine survivorship within the hierarchy of whole-organism phenotypic traits. Functional Ecology, 32 (4). pp. 958-969.

McWilliam, Mike, Hoogenboom, Mia O., Baird, Andrew H., Kuo, Chao-Yang, Madin, Joshua S., and Hughes, Terry P. (2018) Biogeographical disparity in the functional diversity and redundancy of corals. Proceedings of the National Academy of Sciences of the United States of America, 115 (12). pp. 3084-3089.

McCormick, Mark I., Allan, Bridie J.M., Harding, Harry, and Simpson, Stephen D. (2018) Boat noise impacts risk assessment in a coral reef fish but effects depend on engine type. Scientific Reports, 8. 3847.

Montanari, Stefano R. (2018) Causes and consequences of natural hybridisation among coral reef butterflyfishes (Chaetodon: Chaetodontidae). PhD thesis, James Cook University.

Maire, Eva, Villéger, Sébastien, Graham, Nicholas A.J., Hoey, Andrew S., Cinner, Joshua, Ferse, Sebastian C.A., Aliaume, Catherine, Booth, David J., Feary, David A., Kulbicki, Michel, Sandin, Stuart A., Vigliola, Laurent, and Mouillot, David (2018) Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1883). 20181167.

Ma, Ka Yan, van Herwerden, Lynne, Newman, Stephen J., Berumen, Michael L., Choat, John Howard, Chu, Ka Hou, and de Mitcheson, Yvonne Sadovy (2018) Contrasting population genetic structure in three aggregating groupers (Percoidei: Epinephelidae) in the Indo-West Pacific: the importance of reproductive mode. BMC Evolutionary Biology, 18. 180.

MacDonald, Chancey (2018) Depth as refuge: depth gradients in ecological pattern, process, and risk mitigation among coral reef fishes. PhD thesis, James Cook University.

Miller, Mark (2018) Foraging niche specialisation and resource use in tropical seabirds: implications for management. PhD thesis, James Cook University.

Morse, Peter, Kjeldsen, Shannon R., Meekan, Mark G., McCormick, Mark I., Finn, Julian, Huffard, Christine L., and Zenger, Kyall R. (2018) Genome-wide comparisons reveal a clinal species pattern within a holobenthic octopod - the Australian Southern blue-ringed octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Ecology and Evolution, 8 (4). pp. 2253-2267.

Morse, Peter, Huffard, Christine L., Meekan, Mark G., McCormick, Mark I., and Zenger, Kyall R. (2018) Mating behaviour and postcopulatory fertilization patterns in the southern blue-ringed octopus, Hapalochlaena maculosa. Animal Behaviour, 136. pp. 41-51.

McWilliam, Mike, Chase, Tory J., and Hoogenboom, Mia O. (2018) Neighbor diversity regulates the productivity of coral assemblages. Current Biology, 28 (22). pp. 3634-3639.

Meekan, Mark G., McCormick, Mark I., Simpson, Stephen D., Chivers, Douglas P., and Ferrari, Maud C.O. (2018) Never off the hook: how fishing subverts predator-prey relationships in marine teleosts. Frontiers in Ecology and Evolution, 6. 157. pp. 1-10.

McDuie, Fiona, Weeks, Scarla J., and Congdon, Bradley C. (2018) Oceanographic drivers of near-colony seabird foraging site use in tropical marine systems. Marine Ecology Progress Series, 589. pp. 209-225.

Maroso, F., Hillen, J.E.J., Pardo, B.G., Gkagkavouzis, K., Coscia, I., Hermida, M., Franch, R., Hellemans, B., Van Houdt, J., Simionati, B., Taggart, J.B., Nielsen, E.E., Maes, G.E., Ciavaglia, S.A., Webster, L.M., Volckaert, F.A.M., Martínez, P., Bargelloni, Luca, Ogden, R., and AquaTrace Consortium, (2018) Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species. Marine Genomics, 39. pp. 64-72.

Maxwell, S.J., Liverani, V., Rymer, T.R., and Congdon, B.C. (2018) Revision of Terebellum delicatum Kuroda and Kawamoto in Kawamoto and Tanabe, 1956 (Gastropoda, Seraphsidae). Royal Society of Queensland Proceedings, 123. pp. 61-67.

Miller, Mark G.R., Silva, Fabiola R.O., Machovsky-Capuska, Gabriel E., and Congdon, Bradley C. (2018) Sexual segregation in tropical seabirds: drivers of sex-specific foraging in the Brown Booby Sula leucogaster. Journal of Ornithology, 159. pp. 425-437.

Mustika, Putu L., Welters, Riccardo, and Setiasih, Naneng (2018) Tourist satisfaction and expenditures in a reef-adjoining dolphin watching industry in Lovina, Bali Indonesia. In: Prideaux, Bruce, and Pabel, Anja, (eds.) Coral Reefs: tourism, conservation and management. Earthscan Oceans . Routledge, Abingdon, UK, pp. 184-197.

Maxwell, Stephen John (2018) A classical taxonomic revision of Seraphsidae Gray, 1853 (Gastropoda) using a pluralist approach to species assessment. Masters (Research) thesis, James Cook University.

McWilliam, Mike (2018) The functional diversity and redundancy of corals. PhD thesis, James Cook University.

Maxwell, Stephen J., Congdon, Bradley C., and Rymer, Tasmin L. (2018) A new species of Paraseraphs (Gastropoda, Seraphsidae) from the Priabonian White Limestone Formation of Jamaica. Paleontological Journal, 52 (12). pp. 1371-1373.

Maxwell, Stephen J., Dekkers, Aart M., Berchauer, David P., and Congdon, Bradley C. (2017) A new Domiporta species (GASTROPODA, MITRIDAE) from tropical Queensland. The Festivus, 49 (3). pp. 199-205.

Motson, K., and Donelson, J.M. (2017) Limited capacity for developmental thermal acclimation in three tropical wrasses. Coral Reefs, 36 (2). pp. 609-621.

Maxwell, Stephen J., Rymer, Tasmin L., and Congdon, Bradley C. (2017) Sex-ratio bias in Laevistrombus canarium Linné, 1758 (Gastropoda: Strombidae) from Far North Queensland, Australia. Memoirs of the Queensland Museum, 60. pp. 133-138.

Messmer, Vanessa, Pratchett, Morgan, and Chong-Seng, Karen (2017) Variation in incidence and severity of injuries among crown-of-thorns starfish (Acanthaster cf. solaris) on Australia's Great Barrier Reef. Diversity, 9 (1).

Morse, Peter, Zenger, Kyall R., McCormick, Mark I., Meekan, Mark G., and Huffard, Christine L. (2017) Chemical cues correlate with agonistic behaviour and female mate choice behaviour in the southern blue-ringed Octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Journal of Molluscan Studies, 83 (1). pp. 79-87.

Morais, R.A., and Maia, H.A. (2017) Lush underwater forests in mesophotic reefs of the Gulf of Guinea. Coral Reefs, 36. p. 95.

Mooney, Christopher J., and Kingsford, Michael J. (2017) Statolith morphometrics as a tool to distinguish among populations of three cubozoan species. Hydrobiologia, 787 (1). pp. 111-121.

Morse, Peter (2017) The behavioural and molecular ecologies of the southern blue-ringed octopus, Hapalochlaena maculosa (Cephalopoda: octopodidae). PhD thesis, James Cook University.

Mihalitsis, Michalis, and Bellwood, David R. (2017) A morphological and functional basis for maximum prey size in piscivorous fishes. PLoS ONE, 12 (9). e0184679.

McNeil, Mardi A., Webster, Jody M., Beaman, Robin J., and Graham, Trevor L. (2016) New constraints on the spatial distribution and morphology of the Halimeda bioherms of the Great Barrier Reef, Australia. Coral Reefs, 35 (4). pp. 1343-1355.

Maxwell, Stephen J., Congdon, Bradley C., and Rymer, Tasmin L. (2016) A new species of Vasticardium (Bivalvia: Cardiidae) from Queensland, Australia. The Festivus, 48 (4). pp. 248-252.

McKenzie, Len J., Yaakub, Siti Maryam, Tan, Ria, Seymour, Jamie, and Yoshida, Rudi L. (2016) Seagrass habitats of Singapore: environmental drivers and key processes. Raffles Bulletin of Zoology, Supplement 34 (1). pp. 60-77.

Martin, Melissa B., Bruce, Niel L., and Nowak, Barbara F. (2016) Review of the fish-parasitic genus Cymothoa Fabricius, 1793 (Crustacea: Isopoda: Cymothoidae) from Australia. Zootaxa, 4119 (1). pp. 1-72.

Madin, Joshua S., Hoogenboom, Mia O., Connolly, Sean R., Darling, Emily S., Falster, Daniel S., Huang, Danwei, Keith, Sally A., Mizerek, Toni, Pandolfi, John M., Putnam, Hollie M., and Baird, Andrew H. (2016) A trait-based approach to advance coral reef science. Trends in Ecology & Evolution, 31 (6). pp. 419-428.

Matley, J.K., Tobin, A.J., Lédée, E.J.I., Heupel, M.R., and Simpfendorfer, C.A. (2016) Contrasting patterns of vertical and horizontal space use of two exploited and sympatric coral reef fish. Marine Biology, 163. 253. pp. 1-12.

Mora, Camilo, Caldwell, Iain R., Birkeland, Charles, and McManus, John W. (2016) Dredging in the Spratly Islands: gaining land but losing reefs. PLoS Biology, 14 (3). e1002422.

Mizerek, Toni L., Baird, Andrew H., Beaumont, Linda J., and Madin, Joshua S. (2016) Environmental tolerance governs the presence of reef corals at latitudes beyond reef growth. Global Ecology and Biogeography, 25 (8). pp. 979-987.

Morgan, Kyle M., Perry, Chris T., Smithers, Scott G., Johnson, Jamie A., and Daniell, James J. (2016) Evidence of extensive reef development and high coral cover in nearshore environments: implications for understanding coral adaptation in turbid settings. Scientific Reports, 6. 29616. pp. 1-10.

Morgan, Kyle, Perry, Chris, Smithers, Scott, Johnson, Jamie, and Daniell, James (2016) Exploring the hidden shallows: extensive reef development and resilience within the turbid nearshore Great Barrier Reef. Geophysical Research Abstracts, 18. 8699.

Militz, Thane A., McCormick, Mark I., Schoeman, David S., Kinch, Jeff, and Southgate, Paul C. (2016) Frequency and distribution of melanistic morphs in coexisting population of nine clownfish species in Papua New Guinea. Marine Biology, 163. 200. pp. 1-10.

Maire, Eva, Cinner, Joshua, Velez, Laure, Huchery, Cindy, Mora, Camilo, Dagata, Stephanie, Vigliola, Laurent, Wantiez, Laurent, Kulbicki, Michel, and Mouillot, David (2016) How accessible are coral reefs to people? A global assessment based on travel time. Ecology Letters, 19 (4). pp. 351-360.

McCormick, Mark I., and Allan, Bridie J. (2016) Lionfish misidentification circumvents an optimised escape response by prey. Conservation Physiology, 4. cow064. pp. 1-9.

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Puncher, Gregory N., Cariani, Alessia, Maes, Gregory E., Van Houdt, Jeroen, HertenKatho, Koen, Cannas, Rita, Rodriguez-Ezpeleta, Naiara, Albaina, Aitor, Estonba, Andone, Lutcavage, Molly, Hanke, Alex, Rooker, Jay, Franks, James S., Quattro, Joseph S., Basilone, Gualtiero, Fraile, Igaratza, Laconcha, Urtzi, Goni, Nicolas, Kimoto, Ai, Macias, David, Alemany, Francisco, Deguara, Simeon, Zgozi, Salem W., Garibaldi, Fulvio, Oray, Isik K., Karakulak, Firdes Saadet, Abid, Noureddine, Santos, Miguel N., Addis, Piero, Arrizabalaga, Haritz, and Tinti, Fausto (2018) Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next-generation sequencing. Molecular Ecology Resources, 18 (3). pp. 620-638.

Pirotta, Vanessa, Smith, Alastair, Ostrowski, Martin, Russell, Dylan, Jonsen, Ian D., Grech, Alana, and Harcourt, Robert (2017) An economical custom-built drone for assessing whale health. Frontiers in Marine Science, 4. 425.

Pratchett, Morgan S., Caballes, Ciemon F., Wilmes, Jennifer C., Matthews, Samuel, Mellin, Camille, Sweatman, Hugh P.A., Nadler, Lauren E., Brodie, Jon, Thompson, Cassandra A., Hoey, Jessica, Bos, Arthur R., Byrne, Maria, Messmer, Vanessa, V. Fortunato, Sofia A., Chen, Carla C.M., Buck, Alexander C.E., Babcock, Russell C., and Uthicke, Sven (2017) Thirty years of research on crown-of-thorns starfish (1986-2016): scientific advances and emerging opportunities. Diversity, 9 (4).

Photopoulou, Theoni, Ferreira, Ines M., Best, Peter B., Kasuya, Toshio, and Marsh, Helene (2017) Evidence for a postreproductive phase in female false killer whales Pseudorca crassidens. Frontiers in Zoology, 14.

Page, C.A., Field, S.N., Pollock, F.J., Lamb, J.B., Shedrawi, G., and Wilson, S.K. (2017) Assessing coral health and disease from digital photographs and in situ surveys. Environmental Monitoring and Assessment, 189. 18.

Petit, Graciela Pulido, Wildermann, Natalie, and Barrios Garrido, Hector (2017) Comunidades de macroinvertebrados asociadas a piscinas de marea del litoral rocoso Punta Perret, estado Zulia, Venezuela // Macroinvertebrates community's structure associated to tide pools in the rocky shore of Punta Perret, Zulia State, Venezuela. Ciencia, 25 (1). pp. 15-28.

Palacios Otero, Maria del Mar (2017) Controlling mesopredators: importance of behavioural interactions in trophic cascades. PhD thesis, James Cook University.

Pazmiño, Diana A., Maes, Gregory E., Simpfendorfer, Colin A., Salinas-de-León, Pelayo, and van Herwerden, Lynne (2017) Genome-wide SNPs reveal low effective population size within confined management units of the highly vagile Galapagos shark (Carcharhinus galapagensis). Conservation Genetics, 18 (5). pp. 1151-1163.

Puga-Bernabéu, Ángel, Beaman, Robin J., Webster, Jody M., Thomas, Alex L., and Jacobsen, Geraldine (2017) Gloria Knolls Slide: a prominent submarine landslide complex on the Great Barrier Reef margin of north-eastern Australia. Marine Geology, 385. pp. 68-83.

Pinsky, Malin L., Saenz-Agudelo, Pablo, Salles, Océane C., Almany, Glenn R., Bode, Michael, Berumen, Michael L., Andréfouët, Serge, Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2017) Marine dispersal scales are congruent over evolutionary and ecological time. Current Biology, 27 (1). pp. 149-154.

Pontasch, Stefanie, Fisher, Paul L., Krueger, Thomas, Dove, Sophie, Hoegh-Guldberg, Ove, Leggat, William, and Davy, Simon K. (2017) Photoacclimatory and photoprotective responses to cold versus heat stress in high latitude reef corals. Journal of Phycology, 53 (2). pp. 308-321.

Pazmiño Jaramillo, Diana Alexandra (2017) Population genomics informs conservation and management of the Galapagos shark (Carcharhinus galapagensis) at local, regional and oceanic scales. PhD thesis, James Cook University.

Pollock, F. Joseph, Wada, Naoisha, Torda, Gergely, Willis, Bette L., and Bourne, David G. (2017) White syndrome-affected corals have a distinct microbiome at disease lesion fronts. Applied and Environmental Microbiology, 83 (2). e02799-16. pp. 1-15.

Pilcher, Nicolas, Adulyanukosol, Kanjana, Das, Himansu, Davis, Patricia, Hines, Ellen, Kwan, Donna, Marsh, Helene, Ponnampalam, Louisa, and Reynolds, John (2017) A low-cost solution for documenting distribution and abundance of endangered marine fauna and impacts from fisheries. PLoS One, 12 (12).

Putnam, Hollie M., Barott, Katie L., Ainsworth, Tracy D., and Gates, Ruth D. (2017) The vulnerability and resilience of reef-building corals. Current Biology, 27 (11). R528-R540.

Palacios, Maria M., Killen, Shaun S., Nadler, Lauren E., White, James R., and McCormick, Mark I. (2016) Top predators negate the effect of mesopredators on prey physiology. Journal of Animal Ecology, 85 (4). pp. 1078-1086.

Prazeres, Marina, Uthicke, Sven, and Pandolfi, John (2016) Changing light levels induce photo-oxidative stress and alterations in shell density of Amphistegina lobifera (Foraminifera). Marine Ecology Progress Series, 549. pp. 69-78.

Pujolar, José Martin, and Maes, Gregory E. (2016) Evolutionary genomics of North Atlantic eels: current status and perspectives. In: Arai, Takaomi, (ed.) Biology and Ecology of Anguillid Eels. CRC Press, Boca Raton, FL, USA, pp. 36-51.

Payne, Nicholas, Iosilevskii, Gil, Barnett, Adam, Fischer, Chris, Graham, Rachel T., Gleiss, Adrian C., and Watanabe, Yuuki Y. (2016) Great hammerhead sharks swim on their side to reduce transport costs. Nature Communications, 7. 12289. pp. 1-5.

Pereira, Pedro H.C., Santos, Marcus, Lippi, Daniel L., and Silva, Pedro (2016) Ontogenetic foraging activity and feeding selectivity of the Brazilian endemic parrotfishScarus zelindae. PeerJ, 4. e2536. pp. 1-15.

Poulos, Davina Elise (2016) Priority effects and the dynamics of coral reef fish assemblages. PhD thesis, James Cook University.

Pisapia, Chiara, Sweet, Michael, Sweatman, Hugh, and Pratchett, Morgan Stuart (2015) Geographically conserved rates of background mortality among common reef‐building corals in Lhaviyani Atoll, Maldives, versus northern Great Barrier Reef, Australia. Marine Biology, 162 (8). pp. 1579-1586.

Pratchett, M.S., Blowes, S.A., Coker, D., Kubacki, E., Nowicki, J., and Hoey, A.S. (2015) Indirect benefits of high coral cover for non-corallivorous butterflyfishes. Coral Reefs, 34 (2). pp. 665-672.

Poulos, Davina E., and McCormick, Mark I. (2015) Asymmetries in body condition and order of arrival influence competitive ability and survival in a coral reef fish. Oecologia, 179 (3). pp. 719-728.

Pereira, Pedro Henrique Cipresso (2015) Competition and habitat selection in coral-dwelling fishes. PhD thesis, James Cook University.

Pressey, Robert L., Visconti, Piero, and Ferraro, Paul J. (2015) Making parks make a difference: poor alignment of policy, planning and management with protected-area impact, and ways forward. Philosophical Transactions of the Royal Society of London Series B, 370 (1681). pp. 1-19.

Pratchett, Morgan S., Anderson, Kristen D., Hoogenboom, Mia O., Windman, Elizabeth, Baird, Andrew H., Pandolfi, John M., Edmunds, Peter J., and Lough, Janice M. (2015) Spatial, temporal and taxonomic variation in coral growth: implications for the structure and function of coral reef ecosystems. Oceanography and Marine Biology, 53. pp. 215-295.

Pezold, Frank L., and Larson, Helen K. (2015) A revision of the fish genus Oxyurichthys (Gobioidei: Gobiidae) with descriptions of four new species. Zootaxa, 3988 (1). pp. 1-95.

Pratchett, Morgan S., Hoey, Andrew S., Cvitanovic, Christopher, Hobbs, Jean-Paul, and Fulton, Christopher J. (2014) Abundance, diversity, and feeding behavior of coral reef butterflyfishes at Lord Howe Island. Ecology and Evolution, 4 (18). pp. 3612-3625.

Pujolar, J.M., Jacobsen, M.W., Als, T.D., Frydenberg, J., Munch, K., Jónsson, B., Jian, J.B., Cheng, L., Maes, G.E., Bernatchez, L., and Hansen, M.M. (2014) Genome-wide single-generation signatures of local selection in the panmictic European eel. Molecular Ecology, 23 (10). pp. 2514-2528.

Pratchett, Morgan S., Hoey, Andrew S., and Wilson, Shaun K. (2014) Reef degradation and the loss of critical ecosystem goods and services provided by coral reef fishes. Current Opinion in Environmental Sustainability, 7. pp. 37-43.

Poulos, Davina E., and McCormick, Mark I. (2014) Who wins in the battle for space? The importance of priority, behavioural history and size. Animal Behaviour, 90. pp. 305-314.

Puga-Bernabéu, Ángel, Webster, Jody M., Beaman, Robin J., Reimer, Paula J., and Renema, Willem (2014) Filling the gap: A 60 ky record of mixed carbonate-siliciclastic turbidite deposition from the Great Barrier Reef. Marine and Petroleum Geology, 50. pp. 40-50.

Pujolar, J.M., Jacobsen, M.W., Als, T.D., Frydenberg, J., Magnussen, E., Jónsson, B., Jiang, X., Cheng, L., Bekkevold, D., Maes, G.E., Bernatchez, L., and Hansen, M.M. (2014) Assessing patterns of hybridization between North Atlantic eels using diagnostic single-nucleotide polymorphisms. Heredity, 112. pp. 627-637.

Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G. (2014) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA.

Pratchett, Morgan S., Chong-Seng, Karen M., Feary, David A., Hoey, Andrew S., Fulton, Christopher J., Nowicki, Jessica P., Dewan, Adam K., Walker, Stefan P.W., and Berumen, Michael L. (2014) Butterflyfishes as a model group for reef fish ecology: important and emerging research topics. In: Pratchett , Morgan S., Berumen , Michael L., and Kapoor , B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 310-333.

Pratchett, Morgan S. (2014) Feeding preferences and dietary specialisation among obligate coral-feeding butterflyfishes. In: Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 140-179.

Palacios, M.M., Muñoz, C.G., and Zapata, F.A. (2014) Fish corallivory on a pocilloporid reef and experimental coral responses to predation. Coral Reefs, 33 (3). pp. 625-636.

Pisapia, Chiara, Anderson, Kristen, and Pratchett, Morgan S. (2014) Intraspecific variation in physiological condition of reef-building corals associated with differential levels of chronic disturbance. PLoS ONE, 9 (3). e9152. pp. 1-8.

Pratchett, Morgan S., Caballes, Ciemon F., Rivera-Posada, Jairo A., and Sweatman, Hugh P.A. (2014) Limits to understanding and managing outbreaks of crown-of-thorns starfish (Acanthaster spp.). Oceanography and Marine Biology, 52. pp. 133-200.

Pellissier, Loïc, Leprieur, Fabien, Parravicini, Valeriano, Cowman, Peter F., Kulbicki, Michel, Litsios, Glenn, Olsen, Steffen M., Wisz, Mary S., Bellwood, David R., and Mouillot, David (2014) Quaternary coral reef refugia preserved fish diversity. Science, 344 (6187). pp. 1016-1019.

Paris, Claire B., Atema, Jelle, Irisson, Jean-Olivier, Kingsford, Michael, Gerlach, Gabriele, and Guigand, Cedric M. (2013) Reef odor: a wake up call for navigation in reef fish larvae. PLoS ONE, 8 (8). e72808. pp. 1-8.

Ponton, D., Carassou, L., Raillard, S., and Borsa, P. (2013) Geometric morphometrics as a tool for identifying emperor fish (Lethrinidae) larvae and juveniles. Journal of Fish Biology, 83 (1). pp. 14-27.

Pujolar, J.M., Jacobsen, M.W., Frydenberg, J., Als, T.D., Larsen, P.F., Maes, G.E., Zane, L., Jian, J.B., Cheng, L., and Hansen, M.M. (2013) A resource of genome-wide single-nucleotide polymorphisms generated by RAD tag sequencing in the critically endangered European eel. Molecular Ecology Resources, 13 (4). pp. 706-714.

Pereira, P.H.C., and Ferreira, B.P. (2013) Effects of life phase and schooling patterns on the foraging behaviour of coral-reef fishes from the genus Haemulon. Journal of Fish Biology, 82 (4). pp. 1226-1238.

Pratchett, M.S., Graham, N.A.J., and Cole, A.J. (2013) Specialist corallivores dominate butterflyfish assemblages in coral-dominated reef habitats. Journal of Fish Biology, 82 (4). pp. 1177-1191.

Pereira, Pedro H.C., Feitosa, João L.L., Medeiros, Diego V., and Ferreira, Beatrice P. (2013) Reef fishes foraging facilitation behavior: increasing the access to a food resource. Acta Ethologica, 16 (1). pp. 53-56.

Pike, David (2013) Climate influences the global distribution of sea turtle nesting. Global Ecology and Biogeography, 22 (5). pp. 555-566.

Pollock, F.J., Katz, S.M., Bourne, D.G., and Willis, B.L. (2013) Cymo melanodactylus crabs slow progression of white syndrome lesions on corals. Coral Reefs, 32 (1). pp. 43-48.

Pratchett, Morgan S., Hoey, Andrew S., Feary, David A., Bauman, Andrew G., Burt, John A., and Riegl, Bernhard M. (2013) Functional composition of Chaetodon butterflyfishes at a peripheral and extreme coral reef location, the Persian Gulf. Marine Pollution Bulletin, 72 (2). pp. 333-341.

Parravicini, V., Kulbicki, M., Bellwood, D.R., Friedlander, A.M., Arias-Gonzalez, J.E., Chabanet, P., Floeter, S.R, Myers, R., Vigliola, L., D'Agata, S., and Mouillot, D. (2013) Global patterns and predictors of tropical reef fish species richness. Ecography, 36 (12). pp. 1254-1262.

Puill-Stephan, E., Willis, B.L., Abrego, D., Raina, J-B., and van Oppen, M.J.H. (2012) Allorecognition maturation in the broadcast-spawning coral Acropora millepora. Coral Reefs, 31 (4). pp. 1019-1028.

Pratchett, Morgan S., Coker, Darren J., Jones, Geoffrey P., and Munday, Philip L. (2012) Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss. Ecology and Evolution, 2 (9). pp. 2168-2180.

Puill-Stephan, E., van Oppen, M.J.H., Pichavant-Rafini, K., and Willis, B.L. (2012) High potential for formation and persistence of chimeras following aggregated larval settlement in the broadcast spawning coral, Acropora millepora. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1729). pp. 699-708.

Pisapia, Chiara, Cole, Andrew J., and Pratchett, Morgan S. (2012) Changing feeding preferences of butterflyfishes following coral bleaching. In: Proceedings of the 12th International Coral Reef Symposium. 13C_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Pommier, Thomas, Douzery, Emmanuel J.P., and Mouillot, David (2012) Environment drives high phylogenetic turnover among oceanic bacterial communities. Biology Letters, 8 (4). pp. 562-566.

Puill-Stephan, Eneour, Seneca, François O., Miller, David J., van Oppen, Madeleine J.H., and Willis, Bette L. (2012) Expression of putative immune response genes during early ontogeny in the coral Acropora millepora. PLoS ONE, 7 (7). e39099. pp. 1-5.

Poore, Gary C.B., and Bruce, Niel L. (2012) Global diversity of marine isopods (except Asellota and crustacean symbionts). PLoS ONE, 7 (8). e43529. pp. 1-15.

Pratchett, Morgan, Hoey, Andrew, Coker, Darren, and Gardiner, Naomi (2012) Interdependence between reef fishes and scleractinian corals. In: Proceedings of the 12th International Coral Reef Symposium. 13C_3. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Pereira, Pedro H.C., Feitosa, João L.L., Chaves, Laís C.T., and de Araújo, Maria E. (2012) Reef fish foraging associations: "nuclear-follower" behavior or an ephemeral interaction? In: Proceedings of the 12th International Coral Reef Symposium. 13B_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Pratchett, Morgan S., Hoey, Andrew S., Wilson, Shaun K., Messmer, Vanessa, and Graham, Nicholas A.J. (2011) Changes in biodiversity and functioning of reef fish assemblages following coral bleaching and coral loss. Diversity, 3 (3). pp. 424-452.

Penin, Lucie, Michonneau, François, Carroll, Andrew, and Adjeroud, Mehdi (2011) Effects of predators and grazers exclusion on early post-settlement coral mortality. Hydrobiologia, 663 (1). pp. 259-264.

Price, Samantha A., Wainwright, Peter C., Bellwood, David R., Kazancioglu, Erem, Collar, David C., and Near, Thomas J. (2010) Functional innovations and morphological diversification in parrotfish. Evolution, 64 (10). pp. 3057-3068.

Penin, Lucie, Michonneau, François, Baird, Andrew H., Connolly, Sean R., Pratchett, Morgan S., Kayal, Mohsen, and Adjeroud, Mehdi (2010) Early post-settlement mortality and the structure of coral assemblages. Marine Ecology Progress Series, 408. pp. 55-64.

Prayaga, Prabha, Rolfe, John, and Stoeckl, Natalie (2010) The value of recreational fishing in the Great Barrier Reef, Australia: a pooled revealed preference and contingent behaviour model. Marine Policy, 34 (2). pp. 244-251.

Puill-Stephan, Eneour (2010) Chimerism and allorecognition in the broadcast spawning coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.

Planas, M., Quintas, P., Chamorro, A., and Silva, C. (2010) Female maturation, egg characteristics and fatty acids profile in the seahorse Hippocampus guttulatus. Animal Reproduction Science, 122. pp. 66-73.

Peverell, Stirling Charles (2010) Sawfish (Pristidae) of the Gulf of Carpentaria, Queensland, Australia. Masters (Research) thesis, James Cook University.

Pujolar, J.M., Maes, G.E., Van Houdt, J.K.J., and Zane, L. (2009) Isolation and characterization of expressed sequence tag-linked microsatellite loci for the European eel (Anguilla anguilla). Molecular Ecology Resources, 9 (1). pp. 233-235.

Pratchett, M.S., Wilson, S.K., Graham, N.A.J., Munday, P.L., Jones, G.P., and Polunin, N.V.C. (2009) Coral bleaching and consequences for motile reef organisms: past, present and uncertain future effects. In: van Oppen, M.J.H., and Lough, J.M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 205 . Springer, Germany, pp. 139-158.

Page, Cathie (2009) Ecology and biology of coral disease on the Great Barrier Reef. PhD thesis, James Cook University.

Peplow, L.M., Kingsford, M.J., Seymour, J.E., and Van Oppen, M.J.H. (2009) Eight microsatellite loci for the Irukandji syndrome-causing carybdeid jellyfish, Carukia barnesi (Cubozoa, Cnidaria). Molecular Ecology Resources, 9. pp. 670-672.

Prayaga, Prabha, Rolfe, John, and Stoeckl, Natalie (2009) The value of recreational fishing along the Capricorn Coast: a pooled revealed preference and contingent behaviour model. In: Papers from 53rd annual conference of the Australian Agricultural and Resource Economics Society. pp. 1-20. From: Australian Agricultural and Resource Economics Society Conference 2009, 11-13 February 2009, Cairns, QLD, Australia.

Penfold, Rose, Grutter, Alexandra S., Kuris, Armand M., McCormick, Mark I., and Jones, Cornor M. (2008) Interactions between juvenile marine fish and gnathiid isopods: predation versus micropredation. Marine Ecology Progress Series, 357. pp. 111-119.

Peck, Darren R., Bancroft, Wesley J. , and Congdon, Bradley C. (2008) Morphological and molecular variation within an ocean basin in wedge-tailed shearwaters (Puffinus pacificus). Marine Biology, 153 (6). pp. 1113-1125.

Purkis, S.J., Graham, N.A.J., and Riegl, B.M. (2008) Predictability of reef fish diversity and abundance using remote sensing data in Diego Garcia (Chagos Archipelago). Coral Reefs, 27 (1). pp. 167-178.

Peterson, Eric L., Beger, Maria, and Richards, Zoe T. (2008) Thinking outside the reef. Science, 319 (5871). p. 1759.

Patterson, Heather M., and Swearer, Stephen E. (2007) Long-distance dispersal and local retention of larvae as mechanisms of recruitment in an island population of a coral reef fish. Austral Ecology, 32 (2). pp. 122-130.

Phillott, Andrea D, and Parmenter, C John (2007) Deterioration of green sea turtle (Chelonia mydas) eggs after known embryo mortality. Chelonian Conservation and Biology, 6. pp. 262-266.

Pujolar, J.M., Maes, G.E., and Volckaert, F.A.M. (2007) Genetic and morphometric heterogeneity among recruits of the European eel, Anguilla anguilla. Bulletin of Marine Science, 81 (2). pp. 297-308.

Phillott, Andrea D., Parmenter, C. John, and McKillup, Stephen C. (2006) Calcium depletion of eggshell after fungal invasion of sea turtle eggs. Chelonian Conservation and Biology, 5 (1). pp. 146-149.

Peck, Darren R., and Congdon, Bradley C. (2006) Sex-specific chick provisioning and diving behaviour in the wedge-tailed shearwater Puffinus pacificus. Journal of Avian Biology, 37 (3). pp. 245-251.

Plathong, S., Chanmethakul, T., Suwonno, V., Buaphet, P., Baird, A.H., Chen, C.A., and Soontornpitakkool, S. (2006) Daytime gamete release from the reef-building coral, Pavona sp., in the Gulf of Thailand. Coral Reefs, 25 (1). p. 72.

Pollock, Kenneth H., Marsh, Helene D., Lawler, Ivan R., and Alldredge, Matthew W. (2006) Estimating animal abundance in heterogeneous environments: an application to aerial surveys for dugongs. Journal of Wildlife Management, 70 (1). pp. 255-262.

Pujolar, J.M., Maes, G.E., and Volckaert, F.A.M. (2006) Genetic patchiness among recruits in the European eel Anguilla anguilla. Marine Ecology Progress Series, 307. pp. 209-217.

Pecl, Gretta T., and Moltschaniwskyj, Natalie A. (2006) Life history of a short-lived squid (Sepioteuthis australis): resource allocation as a function of size, growth, maturation, and hatching season. ICES Journal of Marine Science, 63 (6). pp. 995-1004.

Peck, Darren Rodney (2006) Local adaptation in the wedge-tailed shearwater (Puffinus pacificus). PhD thesis, James Cook University.

Peck, Darren R., Erwin, Carol A., and Congdon, Bradley C. (2006) Variation in egg-size in the Wedge-tailed Shearwater (Puffinus pacificus). Emu: austral ornithology, 106 (3). pp. 227-231.

Phillott, A.D., and Parmenter, C.J. (2006) The ultrastructure of sea turtle eggshell does not contribute to interspecies variation in fungal invasion of the egg. Canadian Journal of Zoology, 84. pp. 1339-1344.

Pratchett, Morgan S. (2005) Dynamics of an outbreak population of Acanthaster planci at Lizard Island, northern Great Barrier Reef (1995–1999). Coral Reefs, 24 (3). pp. 453-462.

Phillott, Andrea D. (2005) Dipteran invasion of green sea turtle (Chelonia mydas) nests at Heron Island, Queensland. Herpetofauna, 35 (1). pp. 50-53.

Pujolar, J.M., Maes, G.E., Vancoillie, C., and Volckaert, F.A.M. (2005) Growth rate correlates to individual heterozygosity in the european eel, Anguilla anguilla L. Evolution, 59 (1). pp. 189-199.

Phelan, Michael John (2005) Indigenous subsistence fishing at Injinoo Aboriginal Community, northern Cape York Peninsula. Masters (Research) thesis, James Cook University.

Peck, Darren R., Smithers, Brian V., Krockenberger, Andrew K., and Congdon, Bradley C. (2004) Sea surface temperature constrains wedge-tailed shearwater foraging success within breeding seasons. Marine Ecology Progress Series, 281. pp. 259-266.

Peck, Darren R., and Congdon, Bradley C. (2004) Reconciling historical processes and population structure in the sooty tern Sterna fuscata. Journal of Avian Biology, 35 (4). pp. 327-335.

Phillott, A.D., Parmenter, C.J., and Limpus, C.J. (2004) Occurrence of mycobiota in eastern Australian sea turtle nests. Memoirs of the Queensland Museum, 49 (2). pp. 701-703.

Phillott, A.D., and Elsmore, S.A.M. (2004) Black noddies (Anous minutus) and wedge-tailed shearwaters (Puffinus pacificus) as potential hosts for fungi invading sea turtle nests at Heron Island, Queensland. Transactions of the Royal Society of South Australia, 128 (1). p. 73.

Pampoulie, C., Gysels, E.S., Maes, G.E., Hellemans, B., Leentjes, V., Jones, A.G., and Volckaert, F.A.M. (2004) Evidence for fine-scale genetic structure and estuarine colonisation in a potential high gene flow marine goby (Pomatoschistus minutus). Heredity, 92. pp. 434-445.

Parra Vergara, Guido J., Corkeron, Peter J., and Marsh, Helene (2004) The Indo-Pacific Humpback Dolphin, Sousa chinensis (Osbeck, 1765), in Australian Waters: a Summary of current knowledge. Aquatic Mammals, 30 (1). pp. 197-206.

Phillott, Andrea D. (2004) Penetration of the eggshell and invasion of embryonic tissue by fungi colonising sea turtle eggs. Herpetofauna, 34. pp. 44-47.

Pandolfi, John M., Bradbury, Roger H., Sala, Enric, Hughes, Terrence P., Bjorndal, Karen A., Cooke, Richard G., McArdle, Deborah, McClenachan, Loren, Newman, Marah J.H., Paredes, Gustavo, Warner, Robert R., and Jackson, Jeremy B.C. (2003) Response to Causes of coral reef degradation [Aronson et al. (2003) Causes of coral reef degradation]. Science, 302 (5650). pp. 1502-1503.

Pitt, Kylie A., and Kingsford, Michael J. (2003) Recruitment and growth of medusae of the schyphozoan jellyfish, Catostylus mosaicus. Marine and Freshwater Research, 54 (2). pp. 117-125.

Phillott, Andrea D. (2002) Minimizing fungal invasion during the artificial incubation of sea turtle eggs. Herpetological Review, 33 (1). pp. 41-42.

Parra Vergara, Guido J., Azuma, Chieko, Preen, Anthony R., Corkeron, Peter J., and Marsh, Helene (2002) Distribution of Irrawaddy dolphins, Orcaella brevirostris, in Australian waters. Raffles Bulletin of Zoology, Supplement 10. pp. 141-154.

Phillott, A.D., Parmenter, C.J., Limpus, C.J., and Harrower, K.M. (2002) Mycobiota as acute and chronic cloacal contaminants of female sea turtles. Australian Journal of Zoology, 50. pp. 687-695.

Phillott, Andrea D., Parmenter, C. John, and Limpus, Colin J. (2001) Mycoflora identified from failed green (Chelonia mydas) and loggerhead (Caretta caretta) sea turtle eggs at Heron Island, Australia. Chelonian Conservation and Biology, 4 (1). pp. 170-172.

Phillott, Andrea D., and Parmenter, C. John (2001) Influence of diminished respiratory surface area on survival of sea turtle embryos. Journal of Experimental Zoology, Part A, 289 (5). pp. 317-321.

Pratchett, Morgan S. (2001) Dynamics of outbreak populations of crown-of-thorns starfish (Acanthaster planci L.), and their effects on coral reef ecosystems. PhD thesis, James Cook University.

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Silva Leal, Isabela Carolina, de Araújo, Maria Elisabeth, da Cunha, Simone Rabelo, and Cipresso Pereira, Pedro Henrique (2015) The influence of fire-coral colony size and agonistic behaviour of territorial damselfish on associated coral reef fish communities. Marine Environmental Research, 108. pp. 45-54.

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Silva Leal, Isabela Carolina, Cipresso Pereira, Pedro Herique, and de Araújo, Maria Elisabeth (2013) Coral reef fish association and behaviour on the fire coral Millepora spp. in north-east Brazil. Journal of the Marine Biological Association of the United Kingdom, 93 (6). pp. 1703-1711.

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Svavarsson, Jorundur, and Bruce, Niel L. (2012) New and little-known gnathiid isopod crustaceans (Cymothoida) from the northern Great Barrier Reef and the Coral Sea. Zootaxa, 3380. pp. 1-33.

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Strugnell, J.M., Watts, P.C., Smith, P.J., and Allcock, A.L. (2012) Persistent genetic signatures of historic climatic events in an Antarctic octopus. Molecular Ecology, 21 (11). pp. 2775-2787.

Shimomura, Michitaka, and Bruce, Niel (2012) A new species of Halacarsantia Wolff, 1989 (Crustacea, Isopoda, Asellota, Santiidae) from Wistari Reef, southern Great Barrier Reef, Australia. ZooKeys, 173. pp. 1-9.

Saunders, Richard J., Fowler, Anthony J., and Gillanders, Bronwyn M. (2012) The use of food resources by 0+ snapper, Chrysophrys auratus, from northern Spencer Gulf, South Australia. Marine and Freshwater Research, 63 (8). pp. 680-686.

Sutaria, Dipani, and Marsh, Helene (2011) Abundance estimates of Irrawaddy dolphins in Chilika Lagoon, India, using photo-identification based mark-recapture methods. Marine Mammal Science, 27 (4). E338-E348.

Sotje, I, Neues, F, Epple, M, Ludwig, W, Rack, A, Gordon, Matthew, Boese, R, and Tiemann, H (2011) Comparison of the statolith structures of Chironex fleckeri (Cnidaria, Cubozoa) and Periphylla periphylla (Cnidaria, Scyphozoa): a phylogenetic approach. Marine Biology, 158 (5). pp. 1149-1161.

Schaerlaekens, Dirk G., Dekker, Willem, Wickström, Håkan, Volckaert, Filip A.M., and Maes, Gregory E. (2011) Extracting a century of preserved molecular and population demographic data from archived otoliths in the endangered European eel (Anguilla anguilla L.). Journal of Experimental Marine Biology and Ecology, 398 (1-2). pp. 56-62.

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Strugnell, J.M., Cherel, Y., Cooke, I.R., Gleadall, I.G., Hochberg, F.G, Ibáñez, I.G., Jorgensen, E., Laptikhovsky, V.V., Linse, K., Norman, M., Vecchione, M., Voight, J.R., and Allcock, A.L. (2011) The Southern Ocean: source and sink? Deep-Sea Research Part II: topical studies in oceanography, 58 (1-2). pp. 196-204.

Sale, Peter F., Feary, David, Burt, John A., Bauman, Andrew G., Cavalcante, Geórgenes H., Drouillard, Kenneth G., Kjerfve, Björn, Marquis, Elise, Trick, Charles G., Usseglio, Paolo, and Van Lavieren, Hanneke (2011) The growing need for sustainable ecological management of marine communities of the Persian Gulf. Ambio, 40 (1). pp. 4-17.

Sheppard, James K., Marsh, Helene, Jones, Rhondda E., and Lawler, Ivan R. (2010) Dugong habitat use in relation to seagrass nutrients, tides, and diel cycles. Marine Mammal Science, 26 (4). pp. 855-879.

Stoeckl, N., Birtles, A., Valentine, P., Farr, M., Curnock, M., Mangott, A., and Sobtzick, S. (2010) Understanding the Social and Economic Values of Key Marine Species in the Great Barrier Reef: MTSRF Project 4.8.6(a) Final Report, June 2010 with a section focusing on marine turtles. Report. Reef & Rainforest Research Centre, Townsville, QLD, Australia.

Salmon, Michael, Hamann, Mark, and Wyneken, Jeanette (2010) The development of early diving behavior by juvenile flatback sea turtles (Natator depressus). Chelonian Conservation and Biology, 9 (1). pp. 8-17.

Santana Garcon, J., Grech, A., Moloney, J., and Hamann, M. (2010) Relative Exposure Index: an important factor in sea turtle nesting distribution. Aquatic Conservation: marine and freshwater ecosystems , 20 (2). pp. 140-149.

Sobtzick, Susan (2010) Dwarf minke whales in the northern Great Barrier Reef and implications for the sustainable management of the swim-with whales industry. PhD thesis, James Cook University.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Salmon, Michael, Hamann, Mark, Wyneken, Jeanette, and Schauble, Chloe (2009) Early swimming activity by hatchling flatback sea turtles (Natator depressus): a test of the “predation risk” hypothesis. Endangered Species Research, 9 (1). pp. 41-47.

Sheppard, James K., Jones, Rhondda E., Marsh, Helene, and Lawler, Ivan R . (2009) Effects of tidal and diel cycles on dugong habitat use. Journal of Wildlife Management, 73 (1). pp. 45-59.

Sussman, Meir (2009) Coral disease pathogens of the Indo-Pacific Ocean. PhD thesis, James Cook University.

Strugnell, Jan M., Allcock, A. Louise, and Watts, Phillip C. (2009) Microsatellite loci from the endemic Southern Ocean octopus Adelieledone polymorpha (Robson, 1930). Molecular Ecology Resources, 9 (3). pp. 1068-1070.

Sutaria, Dipani (2009) Species conservation in a complex socio-ecological system: Irrawaddy dolphins, Orcaella brevirostris in Chilika Lagoon, India. PhD thesis, James Cook University.

Strugnell, Jan M., Allcock, A. Louise, and Watts, Phillip C. (2009) A panel of microsatellite loci from two species of octopus, Pareledone turqueti (Joubin, 1905) and Pareledone charcoti (Joubin, 1905). Molecular Ecology Resources, 9 (4). pp. 1239-1242.

Strugnell, Jan M., Rogers, Alex D., Prodöhl, Paulo A., Collins, Martin A., and Allcock, A. Louise (2008) The thermohaline expressway: the Southern Ocean as a centre of origin for deep-sea octopuses. Cladistics, 24 (6). pp. 853-860.

Shinzato, Chuya, Iguchi, Akira, Hayward, David C., Technau, Ulrich, Ball, Eldon E., and Miller, David J. (2008) Sox genes in the coral Acropora millepora: divergent expression patterns reflect differences in developmental mechanisms within the Anthozoa. BMC Evolutionary Biology, 8. .

Steneck, Robert H., Bustamante, Rodrigo H., Dayton, Paul K., Jones, Geoffrey P., and Hobday, Alistair J. (2008) Current status and future trends in kelp forest ecosystems. In: Polunin, Nicholas V.C., (ed.) Aquatic Ecosystems: trends and global prospects. Cambridge University Press, Cambridge, UK, pp. 226-241.

Sofonia, Jeremy J., and Anthony, Kenneth R.N. (2008) High-sediment tolerance in the reef coral Turbinaria mesenterina from the inner Great Barrier Reef lagoon (Australia). Estuarine, Coastal and Shelf Science , 78 (4). pp. 748-752.

Srinivas, V. , Baird, Andrew, Kerr, Alexander, and Ram, Sunita (2008) Coastal Bio-shields and their Putative Role During Large Weather Related Disturbance Events IN: Bhalla, R.S, Ram, Sunita and Srinivas, V. (eds) Studies on Vulnerability and Habitat Restoration along the Coromandel Coast. Report Section. FERAL, UNDP-UNTRS, Pondicherry, India .

Schwarz, Jodi A., Brokstein, Peter B., Voolstra, Christian, Terry, Astrid Y., Miller, David J., Szmant , Alina M., Coffroth, Mary Alice, and Medina, Monica (2008) Coral life history and symbiosis: functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata. BMC Genomics, 9 (97). pp. 1-16.

Strugnell, J.M., Collins, M.A., and Allcock, A.L. (2008) Molecular evolutionary relationships of the octopodid genus Thaumeledone (Cephalopoda : Octopodidae) from the Southern Ocean. Antarctic Science, 20 (3). pp. 245-251.

Short, F., Carruthers, T., Dennison, W., and Waycott, M. (2007) Global seagrass distribution and diversity: a bioregional model. Journal of Experimental Marine Biology and Ecology, 350 (1-2). pp. 3-20.

Sheppard, James K., Lawler, Ivan R ., and Marsh, Helene (2007) Seagrass as pasture for seacows: landscape-level dugong habitat evaluation. Estuarine, Coastal and Shelf Science , 71 (1-2). pp. 117-132.

Srinivasan, M., and Jones, G.P. (2006) Extended breeding and recruitment periods of fishes on a low latitude coral reef. Coral Reefs, 25 (4). pp. 673-682.

Sheppard, James K., Preen, Anthony R., Marsh, Helene, Lawler, Ivan R., Whiting, Scott D., and Jones, Rhondda E. (2006) Movement heterogeneity of dugongs, Dugong dugon (Müller), over large spatial scales. Journal of Experimental Marine Biology and Ecology, 334 (1). pp. 64-83.

Sampey, Alison (2006) Distributions and diets of the larvae of tropical shorefishes near the northwest cape of Australia. Masters (Research) thesis, James Cook University.

Sims, David W., Wearmouth, Victoria J., Southall, Emily J., Hill, Jaqueline M., Moore, Pippa, Rawlinson, Kate, Hutchinson, Neil, Budd, Georgina C., Righton, Dave, Metcalfe, Julian, Nash, Jon, and Morritt, David (2006) Hunt warm, rest cool: bioenergetic strategy underlying diel vertical migration of a benthic shark. Journal of Animal Ecology, 75 (1). pp. 176-190.

Smith, Amanda, Newsome, David, Lee, Diane, and Stoeckl, Natalie (2006) The Role of Wildlife Icons as Major Tourist Attractions: case studies: Monkey Mia Dolphins and Hervey Bay whale watching. Report. Cooperative Research Centre for Sustainable Tourism, Gold Coast, Qld.

Sofonia, Jeremy (2006) Sediment responses of corals from inshore reefs, Great Barrier Reef, Australia. Masters (Research) thesis, James Cook University.

Schaffelke, Britta, and Deane, David (2005) Desiccation tolerance of the introduced marine green alga Codium fragile ssp. Tomentosoides - clues for likely transport vectors. Biological Invasions, 7 (4). pp. 577-587.

Simpfendorfer, Colin A. (2005) Threatened fishes of the world: Pristis pectinata Latham, 1794 (Pristidae). Environmental Biology of Fishes, 73 (1). p. 20.

Sapolu, Tebaua (2005) Age-based demography and reproductive ontogeny of angelfishes belonging to the family Pomacanthidae. Masters (Research) thesis, James Cook University.

Sheaves, Marcus (2005) Nature and consequences of biological connectivity in mangroves systems. Marine Ecology Progress Series, 302. pp. 293-305.

Sims, D.W., Southall, E.J., Waermouth, V.J., Hutchinson, N., Budd, G.C., and Morritt, D. (2005) Refuging behaviour in the nursehound Scyliorhinus stellaris (Chondrichthyes: Elasmobranchii): preliminary evidence from acoustic telemetry. Journal of the Marine Biological Association of the United Kingdom, 85. pp. 1137-1140.

Sachlikidis, N.G., Jones, C.M., and Seymour, J.E. (2005) Reproductive cues in Panulirus ornatus. New Zealand Journal of Marine and Freshwater Research, 39 (Special Issue 1). pp. 305-310.

Smith, Luke Darren (2005) Resilience and recovery of coral communities on an isolated reef system in Western Australia following a catastrophic mortality event. PhD thesis, James Cook University.

Schaffelke, Britta, Mellors, Jane, and Duke, Norman C. (2005) Water quality in the Great Barrier Reef region: responses of mangrove, seagrass and macroalgal communities. Marine Pollution Bulletin, 51 (1-4). pp. 279-296.

Smith, Shawn, and McCormick, Mark I. (2004) Efficacy of passive integrated transponder tags to determine spawning-site visitations by a tropical fish. Coral Reefs, 23 (4). pp. 570-577.

Schaffelke, Britta, Heimann, Kirsten, Marshall, Paul A, and Ayling, A.M. (2004) Blooms of Chrysocystis fragilis on the Great Barrier Reef. Coral Reefs, 23 (4). p. 514.

Srinivasan, Maya (2003) Depth distributions of coral reef fishes: the influences of microhabitat structure, settlement, and post-settlement processes. Oecologia, 137 (1). pp. 76-84.

Schubert, Melissa, Munday, Philip L., Caley, M. Julian, Jones, Geoffrey P., and Llewellyn, Lyndon E. (2003) The toxicity of skin secretions from coral-dwelling gobies and their potential role as a predator deterrent. Environmental Biology of Fishes, 67 (2). pp. 359-367.

Smithers, B.V., Peck, D.R., Krockenberger, A.K., and Congdon, B.C. (2003) Elevated sea-surface temperature, reduced provisioning and reproductive failure of wedge-tailed shearwaters (Puffinus pacificus) in the southern Great Barrier Reef, Australia. Marine and Freshwater Research, 54 (8). pp. 973-977.

Southgate, Paul C., and Beer, Andrew C. (2000) Growth of blacklip pearl oyster (Pinctada margaritifera) juveniles using different nursery culture techniques. Aquaculture, 187 (1-2). pp. 97-104.

Samoilys, Melita A., and Roelofs, Anthony (2000) Defining the reproductive biology of a large serranid Plectropomus leopardus. Report. CRC Reef Research Centre, Townsville, QLD, Australia.

Samoilys, Melita Anne (2000) Reproductive dynamics of an exploited serranid on the Great Barrier Reef. PhD thesis, James Cook University.

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This list was generated on Mon Mar 18 22:47:08 2024 AEST.