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Josi, Dario, Heg, Dik, Takeyama, Tomohiro, Bonfils, Danielle, Konovalov, Dmitry A., Frommen, Joachim G., Kohda, Masanori, and Taborsky, Michael (2021) Age‐ and sex‐dependent variation in relatedness corresponds to reproductive skew, territory inheritance and workload in cooperatively breeding cichlids. Evolution. (In Press)

Antoun, Elie, Migliavacca, Eugenia, Garratt, Emma S., Barton, Sheila J., Titcombe, Phil, Westbury, Leo D., Baczynska, Alica, Dodds, Richards, Roberts, Helen C., Sayer, Avan A., Shaw, Sarah, Syddall, H.E., Sheppard, Allan, McFarlane, Craig, Karnani, Neerja, Forrester, Terrence, Cooper, Cyrus, Feige, Jerome N., Patel, Harnish P., Godfrey, Keith M., Lillycrop, Karen A., and EpiGen Global Research Consortium, (2021) Altered H19/miR‐675 expression in skeletal muscle is associated with low muscle mass in community‐dwelling older adults. JCSM Rapid Communications, 4 (2). pp. 207-221.

Riddell, Pia, Paris, Monique C.J., Joonè, Carolynne J., Pageat, Patrick, and Paris, Damien B.B.P. (2021) Appeasing pheromones for the management of stress and aggression during conservation of wild canids: could the solution be right under our nose? Animals, 11 (6). 1574.

Krishnan, Anirudh, Chilton, Emily, Raman, Jaishankar, Saxena, Pankaj, McFarlane, Craig, Trollope, Alexandra F., Kinobe, Robert, and Chilton, Lisa (2021) Are interactions between epicardial adipose tissue, cardiac fibroblasts and cardiac myocytes instrumental in atrial fibrosis and atrial fibrillation? Cells, 10 (9). 2501.

Jensen, Sacha A., Atwa, Ondine, and Handford, Penny A. (2021) Assembly assay identifies a critical region of human fibrillin-1 required for 10 - 12 nm diameter microfibril biogenesis. PLoS ONE, 16 (3). e0248532.

Clement, Rebecca A., Flores-Moreno, Habacuc, Cernusak, Lucas A., Cheesman, Alexander W., Yatsko, Abbey R., Allison, Steven D., Eggleton, Paul, and Zanne, Amy E. (2021) Assessing the Australian termite diversity anomaly: how habitat and rainfall affect termite assemblages. Frontiers in Ecology and Evolution, 9. 657444.

Van Dyke, James U., Thompson, Michael B., Burridge, Christopher P., Castelli, Meghan A., Clulow, Simon, Dissanayake, Duminda S.B., Dong, Caroline M., Doody, J. Sean, Edwards, Danielle L., Ezaz, Tariq, Friesen, Christopher R., Gardner, Michael G., Georges, Arthur, Higgie, Megan, Hill, Peta L., Holleley, Clare E., Hoops, Daniel, Hoskin, Conrad J., Merry, Deirdre L., Riley, Julia L., Wapstra, Erik, While, Geoffrey M., Whiteley, Sarah L., Whiting, Martin., Zozaya, Stephen M., and Whittington, Camilla (2021) Australian lizards are outstanding models for reproductive biology research. Australian Journal of Zoology, 68 (4). pp. 168-199.

Hirschfeld, Maximilian, Dudgeon, Christine, Sheaves, Marcus, and Barnett, Adam (2021) Barriers in a sea of elasmobranchs: from fishing for populations to testing hypotheses in population genetics. Global Ecology and Biogeography, 30 (11). pp. 2147-2163.

Schlaefer, Jodie A., Wolanski, Eric, Lambrechts, Jonathan, and Kingsford, Michael J. (2021) Behavioural and oceanographic isolation of an island‑based jellyfish (Copula sivickisi, Class Cubozoa) population. Scientific Reports, 11. 10280.

Hernandez Duran, Linda, Wilson, David Thomas, Briffa, Mark, and Rymer, Tasmin Lee (2021) Beyond spider personality: the relationships between behavioral, physiological, and environmental factors. Ecology and Evolution, 11 (7). pp. 2974-2989.

Peres, Newton G., Wang, Nancy, Whitney, Paul, Engel, Sven, Shreenivas, Meghanashree M., Comerford, Ian, Hocking, Dianna M., Erazo, Anna B., Forster, Irmgard, Kupz, Andreas, Gebhardt, Thomas, McColl, Shaun R., McSorley, Stephen J., Bedoui, Sammy, and Strugnell, Richard A. (2021) CD4+ T cell immunity to Salmonella is transient in the circulation. PLoS Pathogens. (In Press)

Alharbi, Adel B., Schmitz, Ulf, Bailey, Charles G., and Rasko, John E.J. (2021) CTCF as a regulator of alternative splicing: new tricks for an old player. Nucleic Acids Research. (In Press)

Taylor, Lauren, Wankell, Miriam, Saxena, Pankaj, McFarlane, Craig McFarlane, and Hebbard, Lionel (2021) Cell adhesion an important determinant of myogenesis and satellite cell activity. Biochimica et Biophysica Acta. Molecular Cell Research, 1869 (2). 119170.

Frauendorf, Magali, Allen, Andrew M., Verhulst, Simon, Jongejans, Eelke, Ens, Bruno J., van der Kolk, Henk Jan, de Kroon, Hans, Nienhuis, Jeroen, and van de Pol, Martijn (2021) Conceptualizing and quantifying body condition using structural equation modelling: a user guide. Journal of Animal Ecology. (In Press)

Greenfield, Melinda J., Lach, Lori, Congdon, Brad C., Anslan, Sten, Tedersoo, Leho, Field, Matt, and Abell, Sandra E. (2021) Consistent patterns of fungal communities within ant-plants across a large geographic range strongly suggest a multipartite mutualism. Mycological Progress, 20. pp. 681-699.

Husain, Aliabbas A., Kupz, Andreas, and Kashyap, Rajpal S. (2021) Controlling the drug-resistant tuberculosis epidemic in India: challenges and implications. Epidemiology and Health, 43. e2021022.

van de Pol, Martijn, and Brouwer, Lyanne (2021) Cross‐lags and the unbiased estimation of life‐history and demographic parameters. Journal of Animal Ecology, 90 (10). pp. 2234-2253.

Rymer, Tasmin L., Cruise, Megan, and Pillay, Neville (2021) Decision-making by bushveld gerbils (Gerbilliscus leucogaster). Journal of Comparative Psychology, 135 (2). pp. 244-257.

Protzko, John, Tanner, Isaac Z., Dedyo, Morgan Daly, Fu, JiaJia, Perma, Bhavya, Friedman, Daniel Ari, Blidner, Ada Gabriela, Johnston, Juliet Tegan, Srivastava, Anant Kumar, Ruscher, Roland, Kupz, Andreas, Tarselli, Michael A., Beardsley, Felicia, Jensen, Mark Martin, Konstantinides, Nikos, Agarwal, Divyansh, Yuen, Julia, Gopinath, Suchitra D., Duong, Michael Tran, Strong, Michael, Soták, Matúš, Burnette, Katie, Kirshner, Samuel Nathan, Nikolaou, Athanasia, Ali, Basant A., de Oliveira Júnior, Benedito Alves, and Sojli, Elvira (2021) Defining events: 2020 in hindsight. Science, 371 (6524). pp. 22-24.

Werneck, Max Rondon, Conti, Lais Modolo, and Blair, David (2021) Desmogonius baldassinae n. sp. (Digenea: Pronocephalidae) collected in a green sea turtle—Chelonia mydas—from Brazil. Parasitology Research, 120 (6). pp. 2281-2285.

Maxwell, Stephen J., Rymer, Tasmin L., Rowell, Misha K., Hernandez Duran, Linda C., Berschauer, David, Underdown, Michael, Petuch, Edward J., and Dekkers, Aart (2021) Defining and bringing relevance of meaning to species group-level taxa. Proceedings of the Biological Society of Washington, 134. pp. 27-28.

Oliva, Jessica, and Green, Tim Robert (2021) Dog tales: mindful dog interactions evoke similar experiences to dog assisted mindfulness meditations. Animals, 11 (7). 104.

Hemingson, Christopher R., Siqueira, Alexandre C., Cowman, Peter F., and Bellwood, David R. (2021) Drivers of eyespot evolution in coral reef fishes. Evolution, 75 (4). pp. 903-914.

Heijmenberg, Isis, Husain, Aliabbas, Sathkumara Mudiyanse, Harindra D., Muruganandah, Visai, Seifert, Julia, Miranda-Hernandez, Socorro, Kashyap, Rajpal Singh, Field, Matt A., Krishnamoorthy, Gopinath, and Kupz, Andreas (2021) ESX-5-targeted export of ESAT-6 in BCG combines enhanced immunogenicity & efficacy against murine tuberculosis with low virulence and reduced persistence. Vaccine. (In Press)

Phie, J., Krishna, S.M., Kinobe, R., Moxon, J.V., Andrade-Lima, A., Morton, S.K., Lazzaroni, S.M., Huynh, P., and Golledge, J. (2021) Effects of quercetin on exercise performance, physical activity and blood supply in a novel model of sustained hind-limb ischaemia. BJS Open, 5 (1). zraa059.

Barton, Jonathan A., Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2021) Efficacy of chemical treatments for Acropora-eating flatworm infestations. Aquaculture, 532. 735978.

Jaroenram, Wansadaj, Hayakijkosol, Orachun, Owens, Leigh, and Elliman, Jennifer (2021) Establishing a gold standard method for the detection of Cherax reovirus using reverse transcriptase, quantitative, polymerase chain reaction. Journal of Virological Methods, 293. 114169.

Wijeyesinghe1, Sathi, Beura, Lalit K., Pierson, Mark J., Stolley, Michael J., Adam, Omar A., Ruscher, Roland, Steinert, Elizabeth M., Rosato, Pamela C., Vezys, Vaiva, and Masopust, David (2021) Expansible residence decentralizes immune homeostasis. Nature, 592. pp. 457-462.

Rowell, Misha Kyla, and Rymer, Tasmin Lee (2021) Exploration influences problem solving in the fawn-footed mosaic-tailed rat (Melomys cervinipes). Ethology, 127 (7). pp. 592-604.

González-Paredes, Daniel, Ariel, Ellen, David, Maria Florencia, Ferrando, Virginia, Marsh, Helene, and Hamann, Mark (2021) Gastrointestinal transit times in juvenile green turtles: an approach for assessing digestive motility disorders. Journal of Experimental Marine Biology and Ecology, 544. 151616.

Zhang, Xiuping, Blair, David, Wolinska, Justyna, Ma, Xiaolin, Yang, Wenwu, Hu, Wei, and Yin, Mingbo (2021) Genomic regions associated with adaptation to predation in Daphnia often include members of expanded gene families. Proceedings of the Royal Society of London Series B, Biological Sciences, 288 (1955). 20210803.

Peng, Yunke, Bloomfield, Keith J., Cernusak, Lucas A., Domingues, Tomas F., and Prentice, I. Colin (2021) Global climate and nutrient controls of photosynthetic capacity. Communications Biology, 4 (1). 462.

Cockburn, Andrew, Peñalba, Joshua V., Jaccoud, Damian, Kilian, Andrzej, Brouwer, Lyanne, Double, Michael C., Margraf, Nicolas, Osmond, Helen L., Kruuk, Loeske E.B., and van de Pol, Martijn (2021) Hiphop: improved paternity assignment among close relatives using a simple exclusion method for biallelic markers. Molecular Ecology Resources, 21 (6). pp. 1850-1865.

Streit, Robert P., Hemingson, Christopher R., Cumming, Graeme S., and Bellwood, David R. (2021) How flexible are habitat specialists? Short-term space use in obligate coral-dwelling damselfishes. Reviews in Fish Biology and Fisheries, 31. pp. 381-398.

Nauheimer, Lars, Weigner, Nicholas, Joyce, Elizabeth, Crayn, Darren, Clarke, Charles, and Nargar, Katharina (2021) HybPhaser: a workflow for the detection and phasing of hybrids in target capture data sets. Applications in Plant Sciences, 9 (7). e11441.

Hobbs, Jean-Paul A., Richards, Zoe T., Popovic, Iva, Lei, Chuan, Staeudle, Timo M., Montanari, Stefano R., and Dibattista, Joseph D. (2021) Hybridisation and the evolution of coral reef biodiversity. Coral Reefs. (In Press)

Lambers, Hans, Wright, Ian J., Pereira, Caio Guilherme, Bellingham, Peter J., Bentley, Lisa Patrick, Boonman, Alex, Cernusak, Lucas A., Foulds, William, Gleason, Sean M., Gray, Emma F., Hayes, Patrick E., Kooyman, Robert M., Malhi, Yadvinder, Richardson, Sarah J., Shane, Michael W., Staudinger, Christiana, Stock, William D., Swarts, Nigel D., Turner, Benjamin L., Turner, John, Veneklaas, Erik J., Wasaki, Jun, Westoby, Mark, and Xu, Yanggui (2021) Leaf manganese concentrations as a tool to assess belowground plant functioning in phosphorus-impoverished environments. Plant and Soil: international journal on plant-soil relationships, 461. pp. 43-61.

Kupz, Andreas (2021) Live attenuated vaccines for tuberculosis. The Biochemist, 43 (4).

Peters, Jennifer M.R., López, Rosana, Nolf, Markus, Hutley, Lindsay B., Wardlaw, Tim, Cernusak, Lucas A., and Choat, Brendan (2021) Living on the edge: a continental-scale assessment of forest vulnerability to drought. Global Change Biology, 27 (15). pp. 3620-3641.

Amos, Brogan A., Hoffmann, Ary A., Staunton, Kyran M., Lau, Meng-Jia, Burkot, Thomas R., and Ross, Perran A. (2021) Long-range but not short-range attraction of male Aedes aegypti (Diptera: Culicidae) mosquitoes to humans. Journal of Medical Entomology. (In Press)

Campanyà-Llovet, Neus, Le Guitton, Marie, and Watson, Sue-Ann (2021) Long-term and seasonal changes in the life-history biology of the abyssal holothurian Pseudostichopus aemulatus from the Porcupine Abyssal Plain (North-East Atlantic). Deep-sea Research Part I: Oceanographic Research Papers, 174. 103537.

Lee, S. Thera, Georgiev, Hristo, Breed, Elise R., Ruscher, Roland, and Hogquist, Kristin A. (2021) MHC Class I on murine hematopoietic APC selects Type A IEL precursors in the thymus. European Journal of Immunology, 51 (5). pp. 1080-1088.

Rowell, Misha K., and Rymer, Tasmin L. (2021) Memory enhances problem solving in the fawn‑footed mosaic‑tailed rat Melomys cervinipes. Animal Cognition. (In Press)

Lynch, Tim P., Alford, Ross A., and Shine, Richard (2021) Mistaken identity may explain why male sea snakes (Aipysurus laevis, Elapidae, Hydrophiinae) “attack” scuba divers. Scientific Reports, 11 (1). 15267.

Su, Chinh Tran-To, Lua, Wai-Heng, Poh, Jun-Jie, Ling, Wei-Li, Yeo, Joshua-Yi, and Gan, Samuel Ken-En (2021) Molecular insights of nickel binding to therapeutic antibodies as a possible new antibody superantigen. Frontiers in Immunology, 12. 676048.

Joyce, Elizabeth M., Pannell, Caroline M., Rossetto, Maurizio, Yap, Jia Yee S., Thiele, Kevin R., Wilson, Peter D., and Crayn, Darren M. (2021) Molecular phylogeography reveals two geographically and temporally separated floristic exchange tracks between Southeast Asia and northern Australia. Journal of Biogeography, 48 (5). pp. 1213-1227.

Mengoli, Manuel, Oliva, Jessica, Mendonca, Tiago, Chabaud, Camille, Arroub, Sana, Lafont-Lecuelle, Celine, Cozzi, Alessandro, Pageat, Patrick, and Bienboire-Frosini, Cecile (2021) Neurohormonal profiles of assistance dogs compared to pet dogs: what is the impact of different lifestyles? Animals, 11 (9). 2594.

Benettin, Paolo, Nehemy, Magali F., Cernusak, Lucas A., Kahmen, Ansgar, and McDonnell, Jeffrey J. (2021) On the use of leaf water to determine plant water source: a proof of concept. Hydrological Processes, 35 (3). e14073.

Lenancker, Pauline, Feldhaar, Heike, Holzinger, Anja, Greenfield, Melinda, Strain, Angela, Yeeles, Peter, Hoffmann, Benjamin D., Tay, Wee Tek, and Lach, Lori (2021) Origin, behaviour, and genetics of reproductive workers in an invasive ant. Frontiers in Zoology, 18. 13.

Aguirre-Gutiérrez, Jesús, Rifai, Sami, Shenkin, Alexander, Oliveras, Imma, Bentley, Lisa Patrick, Svátek, Martin, Girardin, Cécile A.J., Both, Sabine, Riutta, Terhi, Berenguer, Erika, Kissling, W. Daniel, Bauman, David, Raab, Nicolas, Moore, Sam, Farfan-Rios, William, Figueiredo, Axa Emanuelle Simões, Reis, Simone Matias, Ndong, Josué Edzang, Ondo, Fidèle Evouna, N'ssi Bengone, Natacha, Mihindou, Vianet, Moraes de Seixas, Marina Maria, Adu-Bredu, Stephen, Abernethy, Katharine, Asner, Gregory P., Barlow, Jos, Burslem, David F.R.P., Coomes, David A., Cernusak, Lucas A., Dargie, Greta C., Enquist, Brian J., Ewers, Robert M., Ferreira, Joice, Jeffery, Kathryn J., Joly, Carlos A., Lewis, Simon L., Marimon-Junior, Ben Hur, Martin, Roberta E., Morandi, Paulo E., Phillips, Oliver L., Quesada, Carlos A., Salinas, Norma, Schwantes Marimon, Beatriz, Silman, Miles, Teh, Yit Arn, White, Lee J.T., and Malhi, Yadvinder (2021) Pantropical modelling of canopy functional traits using Sentinel-2 remote sensing data. Remote Sensing of Environment, 252. 112122.

Leow, Melvin Khee Shing, Dogra, Shaillay, Ge, Xiaojia, Chuah, Khoon Leong, Liew, Huiling, Loke, Kelvin Siu Hoong, and McFarlane, Craig (2021) Paraneoplastic secretion of multiple phosphatonins from a deep fibrous histiocytoma causing oncogenic osteomalacia. The Journal of Clinical Endocrinology & Metabolism, 106 (5). e2299-e2308.

Siqueira, Alexandre C., Morais, Renato A., Bellwood, David R., and Cowman, Peter F. (2021) Planktivores as trophic drivers of global coral reef fish diversity patterns. Proceedings of the National Academy of Sciences of the United States of America, 118 (9). e2019404118.

Joyce, Elizabeth M., Thiele, Kevin R., Slik, J. W. Ferry, and Crayn, Darren M. (2021) Plants will cross the lines: climate and available land mass are the major determinants of phytogeographical patterns in the Sunda-Sahul Convergence Zone. Biological Journal of the Linnean Society, 132 (2). pp. 374-387.

Kingsford, Michael J., Schlaefer, Jodie A., and Morrissey, Scott J. (2021) Population structures and levels of connectivity for Scyphozoan and Cubozoan jellyfish. Diversity, 13 (4). 174.

Rowell, Misha K., Pillay, Neville, and Rymer, Tasmin L. (2021) Problem solving in animals: proposal for an ontogenetic perspective. Animals, 11 (3). 866. p. 866.

Karimi, Mohammad Reza, Karimi, Amir Hossein, Abolmaali, Shamsozoha, Mehdi, Sadeghi, and Schmitz, Ulf (2021) Prospects and challenges of cancer systems medicine: from genes to disease networks. Briefings in Bioinformatics. (In Press)

Spinks, Rachel K., Bonzi, Lucrezia C., Ravasi, Timothy, Munday, Philip L., and Donelson, Jennifer M. (2021) Sex- and time-specific parental effects of warming on reproduction and offspring quality in a coral reef fish. Evolutionary Applications, 14 (4). pp. 1145-1158.

Bailey, Charles G., Gupta, Shailendra, Metierre, Cynthia, Amarasekera, Punkaja M.S., O'Young, Patrick, Kyaw, Wunna, Laletin, Tatyana, Francis, Habib, Semaan, Crystal, Sharifi Tabar, Mehdi, Singh, Krishna P., Mullighan, Charles G., Wolkenhauer, Olaf, Schmitz, Ulf, and Rasko, John (2021) Structure–function relationships explain CTCF zinc finger mutation phenotypes in cancer. Cellular and Molecular Life Sciences. (In Press)

Swan, T., Ritmejeryte, E., Sebayang, B., Jones, R., Devine, Gregor, Graham, M., Zich, F.A., Staunton, K., Russell, T.L., and Burkot, T.R. (2021) Sugar prevalence in Aedes albopictus differs by habitat, sex and time of day on Masig Island, Torres Strait, Australia. Parasites & Vectors, 14. 520.

Phie, James, Thanigaimani, Shivshankar, and Golledge, Jonathan (2021) Systematic review and meta-analysis of interventions to slow progression of abdominal aortic aneurysm in mouse models. Arteriosclerosis, Thrombosis and Vascular Biology. (In Press)

Sun, Eun Jin, Wankell, Miriam, Palamuthusingam, Pranavan, McFarlane, Craig, and Hebbard, Lionel (2021) Targeting the PI3K/Akt/mTOR pathway in hepatocellular carcinoma. Biomedicines, 9 (11). 1639.

Caballes, Ciemon Frank, Byrne, Maria, Messmer, Vanessa, and Pratchett, Morgan S. (2021) Temporal variability in gametogenesis and spawning patterns of crown-of-thorns starfish within the outbreak initiation zone in the northern Great Barrier Reef. Marine Biology, 168 (1). 13.

Thompson, Cassandra A., Hoey, Andrew S., Montanari, Stefano R., Messmer, Vanessa, Doll, Peter C., and Pratchett, Morgan S. (2021) Territoriality and condition of chevron butterflyfish (Chaetodon trifascialis) with varying coral cover on the great barrier reef, Australia. Environmental Biology of Fishes, 104. pp. 53-69.

Drane, Kezia, Huerlimann, Roger, Power, Michelle, Whelan, Anna, Ariel, Ellen, Sheehan, Madoc, and Kinobe, Robert (2021) Testudines as sentinels for monitoring the dissemination of antibiotic resistance in marine environments: an integrative review. Antibiotics, 10 (7). 775.

LaMonica, Lauren E., Fox, Rebecca J., and Donelson, Jennifer M. (2021) Thermal sensitivity of juvenile rabbitfishes Siganus doliatus and S. lineatus (Siganidae): a key role for habitat? Coral Reefs. (In Press)

Kupz, Andreas (2021) Tuberculosis kills as many people each year as COVID-19. It’s time we found a better vaccine. The Conversation, 15 January 2021.

Manríquez, Patricio H., Jara, María Elisa, González, Claudio P., Seguel, Mylene E., Domenici, Paolo, Watson, Sue-Ann, Anguita, Cristóbal, Duarte, Cristian, and Brokordt, Katherina (2021) The combined effects of climate change stressors and predatory cues on a mussel species. Science of the Total Environment, 776. 145916.

Manríquez, Patricio H., Gonzalez, Claudio P., Seguel, Mylene, Garcia-Huidobro, M. Roberto, Lohrmann, Karin B., Domenici, Paolo, Watson, Sue-Ann, Duarte, Cristián, and Brokordt, Katherina (2021) The combined effects of ocean acidification and warming on a habitat-forming shell-crushing predatory crab. Science of the Total Environment, 758. 143587.

Maxwell, Stephen J., Hernandez Duran, Linda C., Rowell, Misha K., and Rymer, Tasmin L. (2021) An iconography of extant Gibberulus Jousseaume, 1888 (Mollusca, Gastropoda, Strombidae), and the introduction of a new species from the southwestern Pacific. Proceedings of the Biological Society of Washington, 134 (1). pp. 89-115.

O'Hara, E.P., Wilson, David T., and Seymour, J.E. (2021) The influence of ecological factors on cnidarian venoms. Toxicon, 9-10. 100067.

Downie, Adam T., Leis, Jeffrey M., Cowman, Peter F., McCormick, Mark I., and Rummer, Jodie L. (2021) The influence of habitat association on swimming performance in marine teleost fish larvae. Fish and Fisheries. (In Press)

Sathkumara, Harindra D., Eaton, Janet L., Field, Matt A., Govan, Brenda L., Ketheesan, Natkunam, and Kupz, Andreas (2021) A murine model of tuberculosis/type 2 diabetes comorbidity for investigating the microbiome, metabolome and associated immune parameters. Animal Models and Experimental Medicine, 4 (2). pp. 181-188.

Buitrago, Geraldine, Pickering, Darren, Ruscher, Roland, Cobos Caceres, Claudia, Jones, Linda, Cooper, Martha, Van Waardenberg, Ashley, Ryan, Stephanie, Miles, Kim, Field, Matthew, Dredge, Keith, Daly, Norelle L., Giacomin, Paul R., and Loukas, Alex (2021) A netrin domain-containing protein secreted by the human hookworm Necator americanus protects against CD4 T cell transfer colitis. Translational Research, 232. pp. 88-102.

Ely, Kim S., Rogers, Alistair, Agarwal, Deborah A., Ainsworth, Elizabeth A., Albert, Loren P., Ali, Ashehad, Anderson, Jeremiah, Aspinwall, Michael J., Bellasio, Chandra, Bernacchi, Carl, Bonnage, Steve, Buckley, Thomas N., Bunce, James, Burnett, Angela C., Busch, Florian A., Cavanagh, Amanda, Cernusak, Lucas A., Crystal-Ornelas, Robert, Damerow, Joan, Davidson, Kenneth J., De Kauwe, Martin G., Dietze, Michael C, Domingues, Tomas F., Dusenge, Mirindi Eric, Ellsworth, David S., Evans, John R., Gauthier, Paul P.G., Gimenez, Bruno O., Gordon, Elizabeth P., Gough, Christopher M., Halbritter, Aud H., Hanson, David T., Heskel, Mary, Hogan, J. Aaron, Hupp, Jason R., Jardine, Kolby, Kattge, Jens, Keenan, Trevor, Kromdijk, Johannes, Kumarathunge, Dushan P., Lamour, Julien, Leakey, Andrew D.B., LeBauer, David S., Li, Qianyu, Lundgren, Marjorie R., McDowell, Nate, Meacham-Hensold, Katherine, Medlyn, Belinda E., Moore, David J.P., Negrón-Juárez, Robinson, Niinemets, Ülo, Osborne, Colin P., Pivovaroff, Alexandria L., Poorter, Hendrik, Reed, Sasha C., Ryu, Youngryel, Sanz-Saez, Alvaro, Schmiege, Stephanie C., Serbin, Shawn P., Sharkey, Thomas D., Slot, Martijn, Smith, Nicholas G., Sonawane, Balasaheb V., South, Paul F., Souza, Daisy C., Stinziano, Joseph Ronald, Stuart-Haëntjens, Ellen, Taylor, Samuel H., Tejera, Mauricio D., Uddling, Johan, Vandvik, Vigdis, Varadharajan, Charuleka, Walker, Anthony P., Walker, Berkley J., Warren, Jeffrey M., Way, Danielle A., Wolfe, Brett T., Wu, Jin, Wullschleger, Stan D., Xu, Chonggang, Yan, Zhengbing, and Yang, Dedi (2021) A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics, 61. 101232.

Schmitz, Ulf, Shah, Jaynish S., Dhungel, Bijay P., Monteuuis, Geoffray, Luu, Phuc-Loi, Petrova, Veronika, Metierre, Cynthia, Nair, Shalima S., Bailey, Charles G., Saunders, Verity A., Turhan, Ali G., White, Deborah L., Branford, Susan, Clark, Susan J., Hughes, Timothy P., Wong, Justin J.-L., and Rasko, John E.J. (2020) Widespread aberrant alternative splicing despite molecular remission in chronic myeloid leukaemia patients. Cancers, 12 (12). 3738.

Branconi, Rebecca, Barbasch, Tina A., Francis, Robin K., Srinivasan, Maya, Jones, Geoffrey P., and Buston, Peter M. (2020) Ecological and social constraints combine to promote evolution of non-breeding strategies in clownfish. Communications Biology, 3. 649.

Dowe, John Leslie (2020) The Australian paintings of Marianne North, 1880–1881: landscapes ‘doomed shortly to disappear’. Cunninghamia, 20.

Giribaldi, Julien, Haufe, Yves, Evans, Evans R.J., Amar, Muriel, Durner, Anna, Schmidt, Casey, Faucherre, Adèle, Moha Ou Maati, Hamid, Enjalbal, Christine, Molgó, Jordi, Servent, Denis, Wilson, David T., Daly, Norelle L., and Nicke, Annette (2020) Backbone cyclization turns a venom peptide into a stable and equipotent ligand at both muscle and neuronal nicotinic receptors. Journal of Medicinal Chemistry, 63 (21). pp. 12682-12692.

Meagher, David, Cairns, Andi, and Tagney, Ray (2020) Camptochaete monolina sp. nov. and Camptochaete subporotrichoides (Bryophyta: Lembophyllaceae) from the Australian Wet Tropics. Telopea, 23. pp. 213-220.

Field, Ashley (2020) Classification and typification of Australian lycophytes and ferns based on Pteridophyte Phylogeny Group classification PPG I. Australian Systematic Botany, 33. pp. 1-102.

Glasl, Bettina, Robbins, Steven, Frade, Pedro R., Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole N. (2020) Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 1435-1450.

Alharbi, Adel B., Schmitz, Ulf, Marshall, Amy D., Vanichkina, Darya, Nagarajah, Rajini, Vellozzi, Melissa, Wong, Justin J.L., Bailey, Charles G., and Rasko, John E.J. (2020) Ctcf haploinsufficiency mediates intron retention in a tissue-specific manner. RNA Biology, 18 (1). pp. 93-103.

van der Kolk, H., Krijgsveld, K.L., Linssen, H., Diertens, R., Dolman, D., Jans, M., Frauendorf, M., Ens, B.J., and van de Pol, M. (2020) Cumulative energetic costs of military aircraft, recreational and natural disturbance in roosting shorebirds. Animal Conservation, 23 (4). pp. 359-372.

Thurber, Rebecca Vega, Mydlarz, Laura D., Brandt, Marilyn, Harvell, Drew, Weil, Ernesto, Raymundo, Laurie, Willis, Bette L., Langevin, Stan, Tracy, Allison M., Littman, Raechel, Kemp, Keri M., Dawkins, Phoebe, Prager, Katherine C., Garren, Melissa, and Lamb, Joleah (2020) Deciphering coral disease dynamics: integrating host, microbiome, and the changing environment. Frontiers in Ecology and Evolution, 8. 575927.

Coppock, Amy G., González-Murcia, Saúl O., Srinivasan, Maya, Gardiner, Naomi M., and Jones, Geoffrey P. (2020) Different responses of coral and rubble-dwelling coral reef damselfishes (Family: Pomacentridae) to chemosensory cues from coral reef microhabitats. Marine Biology, 167. 74.

Chen, Jen-Tsung, and Nargar, Katharina (2020) Editorial: orchid genomics and developmental biology. Frontiers in Plant Science, 11. 1013.

Mendonça, Raoani Cruz, Chen, Jun Yu, Zeng, Chaoshu, and Tsuzuki, Mônica Yumi (2020) Embryonic and early larval development of two marine angelfish, Centropyge bicolor and Centropyge bispinosa. Zygote, 28 (3). pp. 196-202.

Morrissey, Scott J., Schlaefer, Jodie A., and Kingsford, Michael J. (2020) Experimental validation of the relationships between cubozoan statolith elemental chemistry and salinity and temperature. Journal of Experimental Marine Biology and Ecology, 527. 151375.

Dowe, John, Maroske, Sara, and May, Tom (2020) Flowers and fungi: illustrations by Ferdinand von Mueller’s nieces. Australian Garden History, 32. pp. 12-15.

Takjoo, Rozita, Wilson, David T., Bansal, Paramjit, Loukas, Alex, Smout, Michael J., and Daly, Norelle L. (2020) Folding of truncated granulin peptides. Biomolecules, 10 (8). 1152.

Bougher, Neale L., and Barrett, Matthew D. (2020) Fungi and slime moulds recorded in surveys at Kings Park and Bold Park – urban bushlands Perth, Western Australia. Western Australian Naturalist, 31 (4). pp. 191-251.

Oakley-Cogan, Arun, Tebbett, Sterling B., and Bellwood, David R. (2020) Habitat zonation on coral reefs: Structural complexity, nutritional resources and herbivorous fish distributions. PLoS ONE, 15 (6). e0233498.

Shima, Amy L., Vaz, Paola K., Johnson, Linda, Devlin, Joanne M., and Skerratt, Lee F. (2020) Herpesvirus infection in Lumholtz’s tree-kangaroo (Dendrolagus lumholtzi). Journal of Wildlife Diseases, 56 (4). pp. 912-917.

Monteuuis, Geoffray, Schmitz, Ulf, Petrova, Veronika, Kearney, Padraic S., and Rasko, John E.J. (2020) Holding on to junk bonds: intron retention in cancer and therapy. Cancer Research, 81 (4). pp. 779-789.

Ling, S.D., Cowan, Z.-L., Boada, J., Flukes, E.B., and Pratchett, M.S. (2020) Homing behaviour by destructive crown-of-thorns starfish is triggered by local availability of coral prey. Proceedings of the Royal Society of London Series B, Biological Sciences, 287 (1938).

Schmidt, Casey A., Wilson, David T., Cooke, Ira, Potriquet, Jeremy, Tungatt, Katie, Muruganandah, Visai, Boote, Chloe, Kuek, Felicity, Miles, John J., Kupz, Andreas, Ryan, Stephanie, Loukas, Alex, Bansal, Paramjit S., Takjoo, Rozita, Miller, David J., Peigneur, Steve, Tytgat, Jan, and Daly, Norelle (2020) Identification and characterization of a peptide from the stony coral Heliofungia actiniformis. Journal of Natural Products, 83 (11). pp. 3454-3463.

Brouwer, Lyanne, Cockburn, Andrew, and van de Pol, Martijn (2020) Integrating fitness components reveals that survival costs outweigh other benefits and costs of group living in two closely related species. American Naturalist, 195 (2). pp. 201-215.

Dowe, John, and Maroske, Sara (2020) John Dallachy (1804–71): collecting botanical specimens at Rockingham Bay. Historical Records of Australian Science, 31 (2). pp. 101-117.

Dowe, John, and Maroske, Sara (2020) John Dallachy (1804–71): from gardener to botanical collector. Historical Records of Australian Science, 31 (2). pp. 87-100.

Green, Immanuel D., Pinello, Natalia, Song, Renhua, Lee, Quitin, Halsted, James M., Kwok, Chau-To, Wong, Alex C. H., Nair, Shalima S., Clark, Susan J., Roediger, Ben, Schmitz, Ulf, Larance, Mark, Hayashi, Rippei, Rasko, John E. J., and Wong, Justin J.-L. (2020) Macrophage development and activation involve coordinated intron retention in key inflammatory regulators. Nucleic Acids Research, 48 (12). pp. 6513-6529.

Huerlimann, Roger, Maes, Gregory E., Maxwell, Michael J., Mobli, Mehdi, Launikonis, Bradley S., Jerry, Dean R., and Wade, Nicholas M. (2020) Multi-species transcriptomics reveals evolutionary diversity in the mechanisms regulating shrimp tail muscle excitation-contraction coupling. Gene, 752. 144765.

Ng, Susanna S., Rivera, Fabian De Labastida, Yan, Juming, Corvino, Dillon, Das, Indrajit, Zhang, Ping, Kuns, Rachel, Chauhan, Shashi Bhushan, Hou, Jiajie, Li, Xian-Yang, Frame, Teija C.M., McEnroe, Benjamin A., Moore, Eilish, Na, Jinrui, Engel, Jessica A., Soon, Megan S. F., Singh, Bhawana, Kueh, Andrew J., Herold, Marco J., de Oca, Marcela Montes, Singh, Siddharth Sankar, Bunn, Patrick T., Aguilera, Amy Roman, Casey, Mika, Braun, Matthias, Ghazanfari, Nazanin, Wani, Shivangi, Wang, Yulin, Amante, Fiona, Edwards, Chelsea L., Haque, Ashraful, Dougall, William C., Singh, Om Prakash, Baxter, Alan G., Teng, Michele W.L., Loukas, Alex, Daly, Norelle L., Cloonan, Nicole, Degli-esposti, Mariapia, Uzonna, Jude, Heath, William R., Bald, Tobias, Tey, Siok-Keen, Nakamura, Kyohei, Hill, Geoffrey R., Kumar, Rajiv, Sundar, Shyam, Smyth, Mark J, and Engwerda, Christian R. (2020) The NK cell granule protein NKG7 regulates cytotoxic granule exocytosis and inflammation. Nature Immunology, 21. pp. 1205-1217.

Dowe, John Leslie, and Latifah, Dian (2020) Oranges or kings? The cryptic etymology of Zippelius’s Orania regalis. Palms, 64 (3). pp. 121-130.

Jin, Young K., Kininmonth, Stuart, Lundgren, Petra B., van Oppen, Madeleine J.H., and Willis, Bette L. (2020) Predicting the spatial distribution of allele frequencies for a gene associated with tolerance to eutrophication and high temperature in the reef-building coral, Acropora millepora, on the Great Barrier Reef. Coral Reefs, 39. pp. 147-158.

Pisapia, Chiara, Edmunds, Peter J., Moeller, Holly V., Riegel, Bernhard, McWilliam, Mike, Wells, Christopher D., and Pratchett, Morgan S. (2020) Projected shifts in coral size structure in the Anthropocene. Advances in Marine Biology, 87 (1). pp. 31-60.

Shi, Wenyuan, Liu, Fang, Liu, An, Huang, Huiyang, Lin, Qi, Zeng, Chaoshu, and Ye, Haihui (2020) Roles of gonad-inhibiting hormone in the protandric simultaneous hermaphrodite peppermint shrimp. Biology of Reproduction, 103 (4). pp. 817-827.

Evans, Edward R.J., McIntyre, Lachlan, Northfield, Tobin, Daly, Norelle L., and Wilson, David T. (2020) Small molecules in the venom of the scorpion Hormurus waigiensis. Biomedicines, 8 (8). 259.

van der Kolk, Henk-Jan, Allen, Andrew M., Ens, Bruno J., Oosterbeek, Kees, Jongejans, Eelke, and van de Pol, Martijn (2020) Spatiotemporal variation in disturbance impacts derived from simultaneous tracking of aircraft and shorebirds. Journal of Applied Ecology, 57 (12). pp. 2406-2418.

Siqueira, Alexandre C., Morais, Renato A., Bellwood, David R., and Cowman, Peter F. (2020) Trophic innovations fuel reef fish diversification. Nature Communications, 11. 2669.

Lebel, Teresa, Syme, Katrina, Barrett, Matt, and Cooper, Jerry (2020) Two new species of Asproinocybe (Tricholomataceae) from Australia. Muelleria, 38. pp. 77-85.

Kennedy, Helen T., Telford, Ian R.H., Crayn, Darren M., and Bruhl, Jeremy J. (2020) Validation of two informally named species of Melichrus (Ericaceae: Epacridoideae) from north-eastern New South Wales. Telopea, 23. pp. 187-196.

Hernández Duran, Linda, Rymer, Tasmin Lee, and Wilson, David Thomas (2020) Variation in venom composition in the Australian funnel-web spiders Hadronyche valida. Toxicon: X, 8. 100063.

Dowe, John, May, Tom W., Maroske, Sara, and Smith, Lucy T. (2020) The Wehl family of South Australia and their botanical connections with “Dear Uncle” Baron Ferdinand von Mueller. Swainsona, 34. pp. 1-79.

Fisher, Mark F., Payne, Colton D., Chetty, Thaveshini, Crayn, Darren, Berkowitz, Oliver, Whelan, James, Rosengren, K. Johan, and Mylne, Joshua S. (2020) The genetic origin of evolidine, the first cyclopeptide discovered in plants, and related orbitides. Journal of Biological Chemistry, 295 (42). pp. 14510-14521.

Nunes, Lucas T., Siqueira, Alexandre C., Cord, Isadora, Ford, Benjamin M., Liedke, Ana M.R., Ferreira, Carlos E.L., and Floeter, Sergio R. (2020) The influence of species abundance, diet and phylogenetic affinity on the co-occurrence of butterflyfishes. Marine Biology, 167 (8). 107.

Cairns, Andi, Meagher, David, Seppelt, Rod D., and Franks, Andrew J. (2020) The moss family Octoblepharaceae A.Eddy ex M.Menzel in Australia. Telopea, 23. pp. 237-244.

Rye, Barbara L., and Barrett, Matt (2020) A new species that’s worth its salt: Verticordia elizabethiae (Myrtaceae: chamelaucieae), a salt-tolerant rarity from semi-arid Western Australia. Nuytsia, 31. pp. 259-263.

Venter, S. (Fanie) (2020) The rediscovery of Bulbophyllum scaphosepalum Schltr. (Section codonosiphon) orchidaceae. Avonia, 38 (3). pp. 196-205.

Rymer, Tasmin L. (2020) The role of olfactory genes in the expression of rodent paternal care behavior. Genes, 11 (3). 292.

Allen, Andrew M., Ens, Bruno J., van de Pol, Martijn, Van Der Jeugd, Henk, Frauendorf, Magali, Van Der Kolk, Henk Jan, Oosterbeek, Kees, Nienhuis, Jeroen, and Jongejans, Eelke (2019) Colour-ring wear and loss effects in citizen science mark-resighting studies. Avian Research, 10 (1). 11.

Arnold, Sarah E.J., Forbes, Samantha J., Hall, David R., Farman, Dudley I., Bridgemohan, Puran, Spinelli, Gustavo R., Bray, Daniel P., Perry, Garvin B., Grey, Leroy, Belmain, Steven R., and Stevenson, Philip C. (2019) Floral odors and the interaction between pollinating Ceratopogonid midges and cacao. Journal of Chemical Ecology, 45. pp. 869-878.

Lichtenauer, Wendy, van de Pol, Martijn, Cockburn, Andrew, and Brouwer, Lyanne (2019) Indirect fitness benefits through extra-pair mating are large for an inbred minority, but cannot explain widespread infidelity among red-winged fairy-wrens. Evolution, 73 (3). pp. 467-480.

Allen, Andrew, Ens, Bruno J., van de Pol, Martijn, Van Der Jeugd, Henk, Frauendorf, Magali, Oosterbeek, Kees, and Jongejans, Eelke (2019) Seasonal survival and migratory connectivity of the Eurasian Oystercatcher revealed by citizen science. Auk, 136 (1). pp. 1-17.

Lai, Xin, Eberhardt, Martin, Schmitz, Ulf, and Vera, Julio (2019) Systems biology-based investigation of cooperating microRNAs as monotherapy or adjuvant therapy in cancer. Nucleic Acids Research, 47 (15). pp. 7753-7766.

Monteuuis, Geoffray, Wong, Justin J.L., Bailey, Charles G., Schmitz, Ulf, and Rasko, John E.J. (2019) The changing paradigm of intron retention: regulation, ramifications and recipes. Nucleic Acids Research, 47 (22). pp. 11497-11513.

Rajasekhar, Magha, Schmitz, Ulf, Flamant, Stephane, Wong, Justin J.-L., Bailey, Charles G., Ritchie, Willian, Holst, Jeff, and Rasko, John E.J. (2018) Identifying microRNA determinants of human myelopoiesis. Scientific Reports, 8. 7264.

Schmitz, Ulf, Pinello, Natalia, Jia, Fangzhi, Alasmari, Sultan, Ritchie, William, Keightley, Maria-Cristina, Shini, Shaniko, Lieschke, Graham J., Wong, Justin J-L., and Rasko, John E.J. (2017) Intron retention enhances gene regulatory complexity in vertebrates. Genome Biology, 18. 216.

Edwards, Christopher R., Ritchie, William, Wong, Justin J-L., Schmitz, Ulf, Middleton, Robert, An, Xiuli, Mohandas, Narla, Rasko, John E.J., and Blobel, Gerd A. (2016) A dynamic intron retention program in the mammalian megakaryocyte and erythrocyte lineages. Blood, 127 (17). e24-e34.

Book Chapter

Strugnell, Richard A., Newton, Hayley, and Kupz, Andreas (2022) Survival Strategies of Intracellular Bacterial Pathogens. In: Tang, Yi-Wei, Hindiyeh, Musa, Liu, Dongyou, Sails, Andrew, Spearman, Paul, and Zhang, Jingren, (eds.) Molecular Medical Microbiology. Elsevier. (In Press)

Schmitz, Ulf, Monteuuis, Geoffray, Petrova, Veronika, Shah, Jaynish S., and Rasko, John E.J. (2021) Computational methods for intron retention identification and quantification. In: Wolkenhauer, Olaf, Cai, Yudong, and Rozman, Damjana, (eds.) Systems Medicine: integrative, qualitative and computational approaches. Academic Press, London Wall, United Kingdom, pp. 63-74.

Rowell, Misha Kyla, and Rymer, Tasmin Lee (2020) Rodentia cognition. In: Vonk, J., and Shackelford, T.K., (eds.) Encyclopedia of Animal Cognition and Behavior. Springer Nature, Cham, Switzerland, pp. 1-9.

Rymer, Tasmin Lee (2019) Parental investment. In: Vonk, J, and Shackelford, T.K., (eds.) Encyclopedia of Animal Cognition and Behavior. Springer Nature, Cham, Switzerland, pp. 1-10.

Cockburn, Andrew, Brouwer, Lyanne, Margraf, Nicolas, Osmond, Helen L., and van de Pol, Martijn (2016) Superb fairy-wrens: making the worst of a good job. In: Koenig, Walter D., Dickinson, Janis L., and den Ridder, Stef, (eds.) Cooperative Breeding in Vertebrates: studies of ecology, evolution, and behavior. Cambridge University Press, Cambridge, UK, pp. 133-149.

Conference Item

Riddell, Pia, Paris, Monique C.J., Joone, Carolynne, Pageat, Patrick, Ganswindt, Andre, Parker, Daniel M., Du Plessis, Cole, and Paris, Damien B.B.P. (2020) Novel appeasing pheromones to minimize stress during metapopulation management of African wild dogs. In: Abstracts from the 33rd Annual Conference of the Australasian Wildlife Management Society. p. 44. From: 33rd Annual Conference of the Australasian Wildlife Management Society, 8-10 December 2020, Online Event.

Thesis

Toft, Casey J. (2021) Defining the ancestral replication fork trap in Tus-dependent bacteria. Masters (Research) thesis, James Cook University.

Downie, Adam Tyler (2021) How do coral reef fishes develop into athletes? PhD thesis, James Cook University.

Hirschfeld, Maximilian (2021) Population structure and connectivity of demersal sharks in isolation. PhD thesis, James Cook University.

Hemingson, Christopher Rae (2021) The colours of coral reef fishes. PhD thesis, James Cook University.

Schlaefer, Jodie Anne (2020) Determining the population structures of cubozoan jellyfishes with biophysical modelling. PhD thesis, James Cook University.

Terraneo, Tullia Isotta (2020) Diversity, phylogeography and taxonomy of hard corals in the genus Porites. PhD thesis, James Cook University.

Bouyoucos, Ian Alexander (2020) Ecological energetics of climate change for tropical sharks. PhD thesis, James Cook University.

Lowe, Jake R. (2020) Relative effects of environmental variation and fishing on the demography and ecology of tropical wrasses. PhD thesis, James Cook University.

Buitrago, Geraldine (2020) The anti-colitic properties of hookworm protein Na-AIP-1. PhD thesis, James Cook University.

Zozaya, Stephen Michael (2019) Using pheromones to understand cryptic lizard diversity. PhD thesis, James Cook University.

Creative Work

van de Pol, M., Brouwer, L., and Cockburn, A. (2020) R package hiphop: parentage assignment using bi-allelic genetic markers. Statistical software. [Creative Work]

This list was generated on Sat Nov 27 23:02:53 2021 AEST.