Article

Condon, Kelly, Bochow, Shaun, Ariel, Ellen, and Miller, Terrence L. (2019) Complete genome sequences of Betanodavirus from Australian barramundi (Lates calcarifer). Microbiology Resource Announcements, 8 (16). e00081-19.

Syahidah, Dewi, Elliman, Jennifer, Constantinoiu, Constantin, and Owens, Leigh (2018) Vero cell lines expressing nuclear location signals of Penaeus merguiensis hepandensovirus: an early study. Asian Journal of Advances in Research, 1 (1). pp. 1-10.

Delghandi, M., Goddard, S., Jerry, D.R., Dao, H.T., Afzal, H., and Al-Jardani, S.S. (2015) Isolation, characterization, and multiplexing of novel microsatellite markers for the tropical scalloped spiny lobster (Panulirus homarus). Genetics and Molecular Research, 14 (4). 5944. pp. 19066-19070.

Cole, Andrew J., De Nys, Rocky, and Paul, Nicholas A. (2015) Biorecovery of nutrient waste as protein in freshwater macroalgae. Algal Research, 7 (2015). pp. 58-65.

Malerba, Martino E., Connolly, Sean R., and Heimann, Kirsten (2015) An experimentally validated nitrate–ammonium–phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake. Ecological Modelling, 317. pp. 30-40.

Obulisamy, P. Karthikeyan, Chidambarampadmavathy, Karthigeyan, Nadarajan, Saravanan, Lee, Patrick K.H., and Heimann, Kirsten (2015) Effect of CH₄/O₂ ratio on fatty acid profile and polyhydroxybutyrate content in a heterotrophic-methanotrophic consortium. Chemosphere, 141. pp. 235-242.

Razaghi, Ali, Huerlimann, Roger, Owens, Leigh, and Heimann, Kirsten (2015) Increased expression and secretion of recombinant hINFγ through amino acid starvation-induced selective pressure on the adjacent HIS4 gene in Pichia pastoris. Acta Facultatis Pharmaceuticae Universitatis Comenianae, 62 (2). pp. 1-8.

Wang, Guizhong, Xu, Jie, Zeng, Chaoshu, Jia, Qilong, Wu, Lisheng, and Li, Shaojing (2015) Pelagic microalgae as suitable diets for the benthic harpacticoid copepod Tigriopus japonicus. Hydrobiologia, 762 (1). pp. 81-88.

Jones, Ben C., and Carton, Alexander G. (2015) Effects of dietary enrichment with alpha-tocopherol acetate and post-harvest filleting on lipid oxidation and flesh quality of tropical farmed barramundi (Lates calcarifer). Aquaculture, 448. pp. 280-287.

Thépot, Valentin, and Jerry, Dean R. (2015) The effect of temperature on the embryonic development of barramundi, the Australian strain of Lates calcarifer (Bloch) using current hatchery practices. Aquaculture Reports, 2. pp. 132-138.

Krause, Gesche, Brugere, Cecile, Diedrich, Amy, Ebeling, Michael W., Ferse, Sebastian C.A., Mikkelsen, Eirik, Agúndez, José A. Pérez, Stead, Selina M., Stybel, Nardine, and Troell, Max (2015) A revolution without people? Closing the people–policy gap in aquaculture development. Aquaculture, 447. pp. 44-55.

Kishore, Pranesh, and Southgate, Paul C. (2015) Does the quality of cultured pearls from the black-lip pearl oyster, Pinctada margaritifera, improve after the second graft? Aquaculture, 446. pp. 97-102.

Yu, Kun, Gong, Jie, Huang, Chencui, Huang, Huiyang, Ye, Haihui, Wang, Guizhong, and Zeng, Chaoshu (2015) Characterization of CCTα and evaluating its expression in the mud crab Scylla paramamosain when challenged by low temperatures alone and in combination with high and low salinity. Cell Stress & Chaperones, 20 (5). pp. 853-864.

Nowland, Samantha J., Jerry, Dean R., and Southgate, Paul C. (2015) A non-destructive tissue sampling technique for holothurians to facilitate extraction of DNA for genetic analysis. Invertebrate Biology, 134 (3). pp. 252-259.

Kishore, Pranesh, and Southgate, Paul C. (2015) Development and function of pearl-sacs grown from regenerated mantle graft tissue in the black-lip pearl oyster, Pinctada margaritifera (Linnaeus, 1758). Fish and Shellfish Immunology, 45 (2). pp. 567-573.

Alajmi, Fahad, Zeng, Chaoshu, and Jerry, Dean R. (2015) Domestication as a novel approach for improving the cultivation of calanoid copepods: a case study with Parvocalanus crassirostris. PLoS ONE, 10 (7). e0133269. pp. 1-16.

Tsuji, Haruo, Zeng, Chaoshu, Romano, Nicholas, Southgate, Paul, and Ye, Haihui (2015) Development of larval culture methods for blue-legged gold coral banded shrimp Stenopus cyanoscelis: effects of prey type and prey density. Fisheries Science, 81 (4). pp. 731-736.

Budd, Alyssa M., Banh, Quyen Q., Domingos, Jose A., and Jerry, Dean R. (2015) Sex control in fish: approaches, challenges and opportunities for aquaculture. Journal of Marine Science and Engineering, 3 (2). jmse3020329. pp. 329-355.

Priyambodo, Bayu, Jones, Clive, and Sammut, Jesmond (2015) The effect of trap type and water depth on puerulus settlement in the spiny lobster aquaculture industry in Indonesia. Aquaculture, 442. pp. 132-137.

Gosch, Björn J., Lawton, Rebecca J., Paul, Nicholas A., de Nys, Rocky, and Magnusson, Marie (2015) Environmental effects on growth and fatty acids in three isolates of Derbesia tenuissima (Bryopsidales, Chlorophyta). Algal Research, 9. pp. 82-93.

Gamble, Steven, Pirozzi, Igor, Hall, Michael R., Zeng, Chaoshu, Conlan, Jessica A., and Francis, David S. (2015) The effects of pre-digested protein sources on the performance of early–mid stage Panulirus ornatus phyllosoma. Aquaculture, 440. pp. 17-24.

Gong, Jie, Ye, Haihui, Xie, Yinjie, Yang, Yanan, Huang, Huiyang, Li, Shaojing, and Zeng, Chaoshu (2015) Ecdysone receptor in the mud crab Scylla paramamosain: a possible role in promoting ovarian development. Journal of Endocrinology, 224 (3). JOE-14-0526. pp. 273-287.

Lawton, Rebecca J., Carl, Christina, de Nys, Rocky, and Paul, Nicholas A. (2015) Heritable variation in growth and biomass productivity in the clonal freshwater macroalga Oedogonium. Algal Research, 8. pp. 108-114.

Magnusson, Marie, Mata, Leonardo, Wang, Na, Zhao, Jian, de Nys, Rocky, and Paul, Nicholas A. (2015) Manipulating antioxidant content in macroalgae in intensive land-based cultivation systems for functional food applications. Algal Research, 8. pp. 153-160.

Militz, Thane A., and Hutson, Kate S. (2015) Beyond symbiosis: cleaner shrimp clean up in culture. PLoS ONE, 10 (2). e0117723. pp. 1-11.

Whalan, Steve, Abdul Wahab, Muhammad A., Sprungala, Susanne, Poole, Andrew J., and de Nys, Rocky (2015) Larval settlement: the role of surface topography for sessile coral reef invertebrates. PLoS ONE, 10 (2). e0117675. pp. 1-17.

Brazenor, Alexander K., and Hutson, Kate S. (2015) Effects of temperature and salinity on the life cycle of Neobenedenia sp. (Monogenea: Capsalidae) infecting farmed barramundi (Lates calcarifer ). Parasitology Research, 114 (5). pp. 1875-1886.

Carton, Guy, Pirozzi, Igor, Jones, Ben, and Smullen, Richard (2015) Adding flavour complexity to farmed barramundi. Global Aquaculture Advocate , 18 (5). pp. 80-81.

Islam , Muhammad Aminul, Rahman, M.M., Heimann, Kirsten, Nabi, Md Nurun, Ristovski, Zoran, Dowell, Ashley, Feng, Bo, von Alvensleben, Nicolas, and Brown, Richard J. (2015) Combustion analysis of microalgae methyl ester in a common rail direct injection diesel engine. Fuel , 143. pp. 351-360.

Neveux, Nicolas, Magnusson, Marie, Maschmeyer, Thomas, de Nys, Rocky, and Paul, Nicholas A. (2015) Comparing the potential production and value of high-energy liquid fuels and protein from marine and freshwater macroalgae. GCB Bioenergy, 7 (4). pp. 673-689.

Ngo, Diu Thi, Pirozzi, Igor, and Glencross, Brett (2015) Digestibility of canola meals in barramundi (Asian seabass; Lates calcarifer). Aquaculture, 435. pp. 442-449.

Mat Noordin, Noordiyana, Zeng, Chaoshu, Southgate, Paul C., and Romano, Nicholas (2015) Effects of dietary fish oil to soybean oil ratio on survival, development, and growth of early juveniles of the blue swimmer crab Portunus pelagicus. Journal of Shellfish Research, 34 (3). pp. 1065-1072.

Gong, Jie, Yu, Kun, Shu, Ling, Ye, Haihui, Li, Shaojing, and Zeng, Chaoshu (2015) Evaluating the effects of temperature, salinity, starvation and autotomy on molting success, molting interval and expression of ecdysone receptor in early juvenile mud crabs, Scylla paramamosain. Journal of Experimental Marine Biology and Ecology, 464. pp. 11-17.

Alajmi, Fahad, and Zeng, Chaoshu (2015) Evaluation of microalgal diets for the intensive cultivation of the tropical calanoid copepod, Parvocalanus crassirostris. Aquaculture Research, 46. pp. 1025-1038.

Kishore, Pranesh, Southgate, Paul, Seeto, Johnson, and Hunter, Justin (2015) Factors influencing the quality of half-pearls (mabe) produced by the winged pearl oyster, Pteria penguin (Röding, 1758). Aquaculture Research, 46 (4). pp. 769-776.

Kishore, Pranesh, and Southgate, Paul C. (2015) Haemocyte persistence after grafting for pearl production in Pinctada margaritifera (Linnaeus, 1758). Fish and Shellfish Immunology, 42 (2). pp. 530-532.

Nguyen Dinh Quang, Duy, Pirozzi, Igor, and Southgate, Paul C. (2015) Ingestion and digestion of live microalgae and microalgae concentrates by sandfish, Holothuria scabra, larvae. Aquaculture, 44. 8486. pp. 256-261.

Berner, Florian, Heimann, Kirsten, and Sheehan, Madoc (2015) Microalgal biofilms for biomass production. Journal of Applied Phycology, 27 (5). pp. 1793-1804.

Lane, Daniel J., van Eyk, Philip J., de Nys, Rocky, Roberts, David A., Cole, Andrew J., and Ashman, Peter J. (2015) Mobilisation of trace elements during thermal conversion of algae cultivated in ash dam water. Biomass & Bioenergy, 83. pp. 183-195.

Rahman, M.M., Stevanovic, S., Islam, M.A., Heimann, K., Nabi, M.N., Thomas, G., Feng, B., Brown, R.J., and Ristovski, Z.D. (2015) Particle emission from microalgae biodiesel combustion and their relative oxidative potential. Environmental Science Processes and Impacts, 17 (9). pp. 1601-1610.

Lane, Daniel J., van Eyk, Philip J., Ashman, Peter J., Kwong, Chi W., de Nys, Rocky, Roberts, David A., Cole, Andrew J., and Lewis, David M. (2015) Release of Cl, S, P, K, and Na during thermal conversion of algal biomass. Energy & Fuels, 29 (4). pp. 2542-2554.

Moorhead, Jonathan A. (2015) Research-scale tank designs for the larval culture of marine ornamental species, with emphasis on fish. Aquacultural Engineering, 64. pp. 32-41.

Eriksen, Marit Skog, Poppe, Trygve T., McCormick, Mark, Damsgard, Børge, Salte, Ragnar, Braastad, Bjarne O., and Bakken, Morten (2015) Simulated maternal pre-spawning stress affects offspring's attributes in farmed Atlantic salmon Salmo salar (Linnaeus, 1758). Aquaculture Research, 46 (6). pp. 1480-1489.

Sharma, Kalpesh K., Ahmed, Faruq, Schenk, Peer M., and Li, Yan (2015) UV-C mediated rapidcarotenoid induction and settling performance of Dunaliellasalina and Haematococcus pluvialis. Biotechnology and Bioengineering, 112 (10). pp. 2106-2114.

Blythe, Jessica, Flaherty, Mark, and Murray, Grant (2015) Vulnerability of coastal livelihoods to shrimp farming: insights from Mozambique. Ambio, 44 (4). pp. 275-284.

Domingos, Jose A., Zenger, Kyall R., and Jerry, Dean R. (2015) Whole-genome shotgun sequence assembly enables rapid gene characterization in the tropical fish barramundi, Lates calcarifer. Animal Genetics, 46 (4). pp. 468-469.

Hilder, Pollyanna I., Cobcroft, Jennifer M., and Battaglene, Stephen C. (2015) The first-feeding response of larval southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872), and yellowtail kingfish, Seriola lalandi (Valenciennes, 1833), to prey density, prey size and larval density. Aquaculture Research, 46 (11). pp. 2736-2751.

Diopere, Eveline, Maes, Gregory E., Komen, Hans, Volckaert, Filip A.M., and Groenen, Martien A.M. (2014) A genetic linkage map of sole (Solea solea): a tool for evolutionary and comparative analyses of exploited (flat) fishes. PLoS ONE, 9 (12). e115040. pp. 1-16.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Moser, Gerhard, Raadsma, Herman W., Taylor, Joseph J., and Zenger, Kyall R. (2014) Determining genetic contributions to host oyster shell growth: quantitative trait loci and genetic association analysis for the silver-lipped pearl oyster, Pinctada maxima. Aquaculture, 434. pp. 367-375.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Moser, Gerhard, Raadsma, Herman W., Taylor, Joseph J., and Zenger, Kyall R. (2014) Quantitative trait loci and genetic association analysis reveals insights into complex pearl quality traits in donor silver-lipped pearl oysters. Aquaculture, 434. pp. 476-485.

Alajmi, Fahad, and Zeng, Chaoshu (2014) The effects of stocking density on key biological parameters influencing culture productivity of the calanoid copepod, Parvocalanus crassirostris. Aquaculture, 434. pp. 201-207.

Alajmi, Fahad, Zeng, Chaoshu, and Jerry, Dean R. (2014) Improvement in the reproductive productivity of the tropical calanoid copepod Parvocalanus crassirostris through selective breeding. Aquaculture, 420–421. pp. 18-23.

Magnusson, Marie, Mata, Leonardo, De Nys, Rocky, and Paul, Nicholas (2014) Biomass, lipid and fatty acid production in large-scale cultures of the marine macroalga Derbesia tenuissima (Chlorophyta). Marine Biotechnology, 16 (4). pp. 456-464.

Paul, Nicholas A., Neveux, Nicolas, Magnusson, Marie, and De Nys, Rocky (2014) Comparative production and nutritional value of "sea grapes" — the tropical green seaweeds Caulerpa lentillifera and C. racemosa. Journal of Applied Phycology, 26 (4). pp. 1833-1844.

Do Huu, Hoang, and Jones, Clive M. (2014) Effects of dietary mannan oligosaccharide supplementation on juvenile spiny lobster Panulirus homarus (Palinuridae). Aquaculture, 432. pp. 258-264.

Huerlimann, Roger, Steinig, Eike J., Loxton, Heather, Zenger, Kyall R., Jerry, Dean R., and Heimann, Kirsten (2014) Effects of growth phase and nitrogen starvation on expression of fatty acid desaturases and fatty acid composition of Isochrysis aff. galbana (TISO). Gene, 545 (1). pp. 36-44.

Cole, Andrew J., de Nys, Rocky, and Paul, Nicholas A. (2014) Removing constraints on the biomass production of freshwater macroalgae by manipulating water exchange to manage nutrient flux. PLoS ONE, 9 (7). e101284. pp. 1-9.

Welladsen, Heather, Kent, Megan, Mangott, Arnold, and Li, Yan (2014) Shelf-life assessment of microalgae concentrates: effect of cold preservation on microalgal nutrition profiles. Aquaculture, 430. pp. 241-247.

Carl, Christina, de Nys, Rocky, and Paul, Nicholas A. (2014) The seeding and cultivation of a tropical species of filamentous ulva for algal biomass production. PLoS ONE, 9 (6). e98700. pp. 1-9.

Carl, Christina, de Nys, Rocky, Lawton, Rebecca J., and Paul, Nicholas A. (2014) Methods for the induction of reproduction in a tropical species of filamentous Ulva. PLoS ONE, 9 (5). e97396. pp. 1-10.

Militz, T.A., Southgate, P.C., Carton, A.G., and Hutson, K.S. (2014) Efficacy of garlic (Allium sativum) extract applied as a therapeutic immersion treatment for Neobenedenia sp. management in aquaculture. Journal of Fish Diseases, 37 (5). pp. 451-461.

Gamble, S., Carton, A.G., and Pirozzi, I. (2014) Open-top static respirometry is a reliable method to determine the routine metabolic rate of barramundi, Lates calcarifer. Marine and Freshwater Behaviour and Physiology, 47 (1). pp. 19-28.

Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2014) Variation in amino acid content and its relationship to nitrogen content and growth rate in Ulva ohnoi (Chlorophyta). Journal of Phycology, 50 (1). pp. 216-226.

Lal, Monal M., Seeto, Johnson, and Pickering, Timothy D. (2014) Complete larval development of the Monkey River Prawn Macrobrachium lar (Palaemonidae) using a novel greenwater technique. SpringerPlus, 3. 568.

Tuller, James, De Santis, Christian, and Jerry, Dean R. (2014) Dietary influence of Fucoidan supplementation on growth of Lates calcarifer (Bloch). Aquaculture Research, 45 (4). pp. 749-754.

Domingos, Jose A., Smith-Keune, Carolyn, Harrison, Paul, and Jerry, Dean R. (2014) Early prediction of long-term family growth performance based on cellular processes: a tool to expedite the establishment of superior foundation broodstock in breeding programs. Aquaculture, 428-429. pp. 88-96.

Islam, Muhammad Aminul, Brown, Richard J., O'Hara, Ian, Kent, Megan, and Heimann, Kirsten (2014) Effect of temperature and moisture on high pressure lipid/oil extraction from microalgae. Energy Conversion and Management, 88. pp. 307-316.

Domingos, Jose A., Smith-Keune, Carolyn, and Jerry, Dean R. (2014) Fate of genetic diversity within and between generations and implications for DNA parentage analysis in selective breeding of mass spawners: a case study of commercially farmed barramundi, Lates calcarifer. Aquaculture, 424-425. pp. 174-182.

Noble, T.H., Smith-Keune, C., and Jerry, D.R. (2014) Genetic investigation of the large-scale escape of a tropical fish, barramundi Lates calcarifer, from a sea-cage facility in northern Australia. Aquaculture Environment Interactions, 5 (2). pp. 173-183.

Romano, Nicholas, Wu, Xugan, Zeng, Chaoshu, Genodepa, Jerome, and Elliman, Jennifer (2014) Growth, osmoregulatory responses and changes to the lipid and fatty acid composition of organs from the mud crab, Scylla errata, over a road salinity range. Marine Biology Research, 10 (5). pp. 460-471.

Wu, X.G., Zeng, C.S., and Southgate, P.C. (2014) Ontogenetic patterns of growth and lipid composition changes of blue swimmer crab larvae: insights into larval biology and lipid nutrition. Marine and Freshwater Research, 65 (3). pp. 228-243.

Negm, Reham K., Cobcroft, Jennifer M., Brown, Malcolm R., Nowak, Barbara F., and Battaglene, Stephen C. (2014) Performance and skeletal abnormality of striped trumpeter Latris lineata larvae and post larvae fed vitamin A enriched Artemia. Aquaculture, 422. pp. 115-123.

Dinh Hoai, Truong , and Hutson, Kate S. (2014) Reproductive strategies of the insidious fish ectoparasite, Neobenedenia sp. (Capsalidae: Monogenea). PLoS ONE, 9 (9). e108801. pp. 1-7.

Kishore, Pranesh, Hunter, Justin, Zeng, Chaoshu, and Southgate, Paul C. (2014) The effects of different culture apparatuses and current velocities on byssus production by the black-lip pearl oyster, Pinctada margaritifera. Aquaculture, 434. pp. 74-77.

Mata, Leonardo, Wright, Emily, Owens, Leigh, Paul, Nicholas, and de Nys, Rocky (2013) Water-soluble natural products from seaweed have limited potential in controlling bacterial pathogens in fish aquaculture. Journal of Applied Phycology, 25 (6). pp. 1963-1973.

Geraylou, Zahra, Souffreau, Caroline, Rurangwa, Eugene, Maes, Gregory E., Spanier, Katina I., Courtin, Christophe M., Delcour, Jan A., Buyse, Johan, and Ollevier, Frans (2013) Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing. FEMS Microbiology Ecology, 86 (2). pp. 357-371.

Lawton, Rebecca J., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2013) Algal bioremediation of waste waters from land-based aquaculture using Ulva: selecting target species and strains. PLoS ONE, 8 (10). e77344. pp. 1-10.

Brazenor, Alexander K., and Hutson, Kate S. (2013) Effect of temperature and salinity on egg hatching and description of the life cycle of Lernanthropus latis (Copepoda: Lernanthropidae) infecting barramundi, Lates calcarifer. Parasitology International, 62 (5). pp. 437-447.

Militz, Thane A., Southgate, Paul C., Carton, Alexander G., and Hutson, Kate S. (2013) Dietary supplementation of garlic (Allium sativum) to prevent monogenean infection in aquaculture. Aquaculture, 408-409. pp. 95-99.

Botté, Emmanuelle S., Smith-Keune, Carolyn, and Jerry, Dean R. (2013) Temperature: a prolonged confounding factor on cholinesterase activity in the tropical reef fish Acanthochromis polyacanthus. Aquatic Toxicology, 140-141. pp. 337-339.

Petersen, Elizabeth H., Jones, Clive, and Priyambodo, Bayu (2013) Bioeconomics of spiny lobster farming in Indonesia. Asian Journal of Agriculture and Development, 10 (1). pp. 25-39.

Cobcroft, Jennifer M., and Battaglene, Stephen C. (2013) Skeletal malformations in Australian marine finfish hatcheries. Aquaculture, 396. pp. 51-58.

von Alvensleben, Nicolas, Stookey, Katherine, Magnusson, Marie, and Heimann, Kirsten (2013) Salinity tolerance of Picochlorum atomus and the use of salinity for contamination control by the freshwater cyanobacterium Pseudanabaena limnetica. PLoS ONE, 8 (5). e63569. pp. 1-12.

Seymour, Scott, Paul, Nicholas A., Dworjanyn, Symon A., and de Nys, Rocky (2013) Feeding preference and performance in the tropical sea urchin Tripneustes gratilla. Aquaculture, 400-401. pp. 6-13.

Doubleday, Zoë A., Clarke, Steven M., Li, Xiaoxu, Pecl, Gretta T., Ward, Tim M., Battaglene, Stephen, Frusher, Stewart, Gibbs, Philip J., Hobday, Alistair J., Hutchinson, Neil, Jennings, Sarah M., and Stoklosa, Richard (2013) Assessing the risk of climate change to aquaculture: a case study from south-east Australia. Aquaculture Environment Interactions , 3 (2). pp. 163-175.

Castine, Sarah A., Paul, Nicholas A., Magnusson, Marie, Bird, Michael I., and de Nys, Rocky (2013) Algal bioproducts derived from suspended solids in intensive land-based aquaculture. Bioresource Technology, 131. pp. 113-120.

Dao, Hoc Tan, Todd, Erica V., and Jerry, Dean R. (2013) Characterization of polymorphic microsatellite loci for the spiny lobster Panulirus spp. and their utility to be applied to other Panulirus lobsters. Conservation Genetics Resources, 5 (1). pp. 43-46.

Liu, Zi-Ming, Wang, Gui-Zhong, Wu, Li-Sheng, Zeng, Zhao-Shu, and Chen, Xue-Lei (2013) Seasonal change in mitochondrial function and metabolic enzyme activity of different populations of the mud crab, Scylla paramamosain, from China. Aquaculture, 376-379. pp. 68-75.

Chowdhury, M.A. Kabir, Siddiqui, Sohail, Hua, Katheline, and Bureau, Dominique P. (2013) Bioenergetics-based factorial model to determine feed requirement and waste output of tilapia produced under commercial conditions. Aquaculture, 410-411. pp. 138-147.

Jones, B., Fuller, S., and Carton, A.G. (2013) Earthy-muddy tainting of cultured barramundi linked to geosmin in tropical northern Australia. Aquaculture Environment Interactions , 3 (2). pp. 117-124.

Hua, Katheline (2013) Estimating maintenance amino acids requirements of fish through a nonlinear mixed modelling approach. Aquaculture Research, 44 (4). pp. 542-553.

Collins, Geoffrey M., Clark, Timothy D., Rummer, Jodie L., and Carton, Alexander G. (2013) Hypoxia tolerance is conserved across genetically distinct sub-populations of an iconic, tropical Australian teleost (Lates calcarifer). Conservation Physiology, 1 (1). pp. 1-9.

Hua, Katheline (2013) Investigating the appropriate mode of expressing lysine requirement of fish through non-linear mixed model analysis and multilevel analysis. British Journal of Nutrition, 109. pp. 1013-1021.

Andrews, Melanie, Cobcroft, Jennifer M., Battaglene, Stephen C., Valdenegro, Victoria, Martin, Melissa B., and Nowak, Barbara F. (2013) Parasitic crustaceans infecting cultured striped trumpeter Latris lineata. Aquaculture, 416. pp. 280-288.

Sarker, Pallab Kumer, Bureau, Dominique P., Hua, Katheline, Drew, Murray D., Forster, Ian, Were, Keith, Hicks, Brad, and Vandenberg, Grant W. (2013) Sustainability issues related to feeding salmonids: a Canadian perspective. Reviews in Aquaculture, 5 (4). pp. 199-219.

Romano, Nicholas, and Zeng, Chaoshu (2013) Toxic effects of ammonia, nitrite, and nitrate to decapod crustaceans: a review on factors influencing their toxicity, physiological consequences, and coping mechanisms. Reviews in Fisheries Science, 21 (1). pp. 1-21.

Battaglene, S.C., and Cobcroft, J.M. (2013) Ultraviolet irradiation is an effective alternative to ozonation as a sea water treatment to prevent Kudoa neurophila (Myxozoa: Myxosporea) infection of striped trumpeter, Latris lineata (Forster). Journal of Fish Diseases, 36 (1). pp. 57-65.

Negm, Reham K., Cobcroft, Jennifer M., Brown, Malcolm R., Nowak, Barbara F., and Battaglene, Stephen C. (2013) The effects of dietary vitamin A in rotifers on the performance and skeletal abnormality of striped trumpeter Latris lineata larvae and post larvae. Aquaculture, 404-405. pp. 105-115.

Rodgers, G.G., Roberts, S.D., and Dixon, C.D. (2013) The effects of temperature on larval size in the western king prawn, Penaeus (Melicertus) latisulcatus Kishinouye, from Spencer Gulf, South Australia: implications for fishery management. Marine and Freshwater Research, 64 (10). pp. 976-985.

Bloecher, Nina, de Nys, Rocky, Poole, Andrew J., and Guenther, Jana (2013) The fouling hydroid Ectopleura larynx: a lack of effect of next generation antifouling technologies. Biofouling, 29 (3). pp. 237-246.

Hutson, Kate S., Mata, Leonardo, Paul, Nicholas A., and De Nys, Rocky (2012) Seaweed extracts as a natural control against the monogenean ectoparasite, Neobenedenia sp., infecting farmed barramundi (Lates calcarifer). International Journal for Parasitology, 42 (13-14). pp. 1135-1141.

Purcell, Steven W., Hair, Cathy A., and Mills, David J. (2012) Sea cucumber culture, farming and sea ranching in the tropics: progress, problems and opportunities. Aquaculture, 368-369. pp. 68-81.

Gosch, Björn J., Magnusson, Marie, Paul, Nicholas A., and de Nys, Rocky (2012) Total lipid and fatty acid composition of seaweeds for the selection of species for oil-based biofuel and bioproducts. GCB Bioenergy, 4 (6). pp. 919-930.

Watson, Sue-Ann, Peck, Lloyd S., Tyler, Paul A., Southgate, Paul C., Tan, Koh Siang, Day, Robert W., and Morley, Simon A. (2012) Marine invertebrate skeleton size varies with latitude, temperature and carbonate saturation: implications for global change and ocean acidification. Global Change Biology, 18 (10). pp. 3026-3038.

Castine, Sarah A., Erler, Dirk V., Trott, Lindsay A., Paul, Nicholas A., De Nys, Rocky, and Eyre, Bradley D. (2012) Denitrification and anammox in tropical aquaculture settlement ponds: an isotope tracer approach for evaluating N2 production. PLoS ONE, 7 (9). e42810.

de Paula Silva, Pedro H., De Nys, Rocky, and Paul, Nicholas A. (2012) Seasonal growth dynamics and resilience of the green tide alga Cladophora coelothrix in high-nutrient tropical aquaculture. Aquaculture Environment Interactions , 2 (3). pp. 253-266.

Camus, Thomas, and Zeng, Chaoshu (2012) Reproductive performance, survival and development of nauplii and copepodites, sex ratio and adult life expectancy of the harpacticoid copepod, Euterpina acutifrons, fed different microalgal diets. Aquaculture Research, 43 (8). pp. 1159-1169.

Newton, J.R., De Santis, C., and Jerry, D.R. (2012) The gene expression response of the catadromous perciform barramundi Lates calcarifer to an acute heat stress. Journal of Fish Biology, 81 (1). pp. 81-93.

Milione, Michael, and Southgate, Paul C. (2012) Reproductive cycle of the winged pearl oyster, Pteria penguin (Röding 1793) (Pteriidae) in north-eastern Australia. Invertebrate Reproduction and Development, 56 (2). pp. 164-171.

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2012) The marine sponge Ianthella basta can recover from stress-induced tissue regression. Hydrobiologia, 687 (1). pp. 227-235.

Domingos, J.A., Fromm, P., Smith-Keune, C., and Jerry, D.R. (2012) A robust flow-cytometric protocol for assessing growth rate of hatchery-reared barramundi Lates calcarifer larvae. Journal of Fish Biology, 80 (6). pp. 2253-2266.

Tziouveli, V., Hall, M., and Smith, G.G. (2012) Evaluation of lipid-enriched Artemia on the reproductive performance of the white-striped cleaner shrimp, Lysmata amboinensis. Aquaculture International, 20 (2). pp. 201-211.

Jerry, Dean R., Kvingedal, Renate, Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Safari, Alex E. (2012) Donor-oyster derived heritability estimates and the effect of genotype × environment interaction on the production of pearl quality traits in the silver-lip pearl oyster, Pinctada maxima. Aquaculture, 338-341. pp. 66-71.

Romano, Nicholas, and Zeng, Chaoshu (2012) Osmoregulation in decapod crustaceans: implications to aquaculture productivity, methods for potential improvement and interactions with elevated ammonia exposure. Aquaculture, 334-337. pp. 12-23.

McGinty, E.L., Zenger, K.R., Jones, D.B., and Jerry, D.R. (2012) Transcriptome analysis of biomineralisation-related genes within the pearl sac: host and donor oyster contribution. Marine Genomics, 5. pp. 27-33.

Tziouveli, Vasiliki, and Smith, Greg G. (2012) A comparison of the fatty acid profiles of adult tissues, and newly hatched, fed and starved Lysmata amboinensis larvae. Aquaculture Research, 43 (4). pp. 577-587.

Mata, Leonardo, Gaspar, Helena, and Santos, Rui (2012) Carbon/nutrient balance in relation to biomass production and halogenated compound content in the red alga Asparagopsis taxiformis (Bonnemaisoniaceae). Journal of Phycology, 48 (1). pp. 248-253.

Athauda, Saman, Anderson, Trevor, and de Nys, Rocky (2012) Effect of rearing water temperature on protandrous sex inversion in cultured Asian Seabass (Lates calcarifer). General and Comparative Endocrinology, 175 (3). pp. 416-423.

Wu, Xugan, Smith, Greg, and Hall, Michael (2012) Patterns of larval growth, lipid composition and fatty acid deposition during early to mid stages of development in Panulirus ornatus phyllosoma. Aquaculture, 330-333. pp. 63-73.

Abdul Wahab, M.A., de Nys, R., and Whalan, S. (2012) Closing the lifecycle for the sustainable aquaculture of the bath sponge Coscinoderma matthewsi. Aquaculture, 324-325. pp. 281-289.

Whalan, Steve, Webster, Nicole S., and Negri, Andrew P. (2012) Crustose coralline algae and a cnidarian neuropeptide trigger larval settlement in two coral reef sponges. PLoS ONE, 7 (1). e30386. pp. 1-8.

Botté, E.S., Jerry, D.R., King, S. Codi, Smith-Keune, C., and Negri, A.P. (2012) Effects of chlorpyrifos on cholinesterase activity and stress markers in the tropical reef fish Acanthochromis polyacanthus. Marine Pollution Bulletin, 65 (4-9). pp. 384-393.

Yang, Xiaozhen, Wang, Jinfeng, Zhao, Liulan, Fan, Peng, Wu, Xugan, Cheng, Yongxu, and Zeng, Chaoshu (2012) Effects of elevated ambient histamine level on survival, growth, sexual maturity and tissue histamine accumulation of the mysis Neomysis awatschensis and Neomysis japonica Nakazawa. Aquaculture International, 20. pp. 347-356.

Wassnig, Matthew, and Southgate, Paul C. (2012) Effects of settlement cues on behaviour and substrate attachment of hatchery reared winged pearl oyster (Pteria penguin) larvae. Aquaculture, 344. pp. 216-222.

Wassnig, Matthew, and Southgate, Paul C. (2012) Embryonic and larval development of Pteria penguin (Röding, 1798) (Bivalvia: Pteriidae). Journal of Molluscan Studies, 78 (1). pp. 134-141.

Hua, Katheline, and Bureau, Dominique P. (2012) Exploring the possibility of quantifying the effects of plant protein ingredients in fish feeds using meta-analysis and nutritional model simulation-based approaches. Aquaculture, 356-357. pp. 284-301.

Angell, Alex R., Pirozzi, Igor, de Nys, Rocky, and Paul, Nicholas A. (2012) Feeding preferences and the nutritional value of tropical algae for the abalone Haliotis asinina. PLoS ONE, 7 (6). e388547. pp. 1-10.

Milione, Michael, and Southgate, Paul (2012) Growth of the winged pearl oyster, Pteria penguin, at dissimilar sites in northeastern Australia. Journal of Shellfish Research, 31 (1). pp. 13-20.

Wang, Chao, Wang, Hongxia, Li, Yan, and Liu, Baozhong (2012) Identification of a fructose-1,6-bisphosphate aldolase gene and association of the single nucleotide polymorphisms with growth traits in the clam Meretrix meretrix. Molecular Biology Reports, 39 (4). pp. 5017-5024.

Romano, Nicholas, Zeng, Chaoshu, Mat Noordin, Noordiyana, and Ng, Wing-Keong (2012) Improving the survival, growth and hemolymph ion maintenance of early juvenile blue swimmer crabs, Portunus pelagicus, at hypo- and hyper-osmotic conditions through dietary long chain PUFA supplementation. Aquaculture, 342-343. pp. 24-30.

Jimmy, Robert A., Pickering, Timothy D., and Hair, Cathy A. (2012) Overview of sea cucumber aquaculture and stocking research in the Western Pacific region. Australian Centre for International Agricultural Research Proceedings, 136. pp. 12-21.

Hair, Cathy (2012) Sandfish (Holothuria scabra) production and sea-ranching trial in Fiji. Australian Centre for International Agricultural Research Proceedings, 136. pp. 129-141.

Carl, Christina, Poole, Andrew J., Williams, Mike R., and de Nys, Rocky (2012) Where to settle-settlement preferences of Mytilus galloprovincialis and choice of habitat at a micro spatial scale. PLoS One, 7 (12). e52358. pp. 1-10.

Cobcroft, Jennifer M., Shu-Chien, Alexander Chong, Kuah, Meng-Kiat, Jaya-Ram, Annette, and Battaglene, Stephen C. (2012) The effects of tank colour, live food enrichment and greenwater on the early onset of jaw malformation in striped trumpeter larvae. Aquaculture, 356. pp. 61-72.

Fitridge, Isla, Dempster, Tim, Guenther, Jana, and de Nys, Rocky (2012) The impact and control of biofouling in marine aquaculture: a review. Biofouling, 28 (7). pp. 649-669.

Jack, Lucy, Wing, Stephen R., Hu, Yi, and Roberts, May (2011) Natural trace elemental markers for adult red rock lobsters Jasus edwardsii vary among replicate distinct water masses. Marine Ecology Progress Series, 443. pp. 141-151.

Jones, D.B., Zenger, K.R., and Jerry, D.R. (2011) In silico whole-genome EST analysis reveals 2322 novel microsatellites for the silver-lipped pearl oyster, Pinctada maxima. Marine Genomics, 4 (4). pp. 287-290.

Cano-Gómez, Ana, Høj, Lone, Owens, Leigh, and Andreakis, Nikolas (2011) Multilocus sequence analysis provides basis for fast and reliable identification of Vibrio harveyi-related species and reveals previous misidentification of important marine pathogens. Systematic and Applied Microbiology, 34 (8). pp. 561-565.

Distel, Daniel L., Amin, Mehwish, Burgoyne, Adam, Linton, Eric, Mamangkey, Gustaf, Morrill, Wendy, Nove, John, Wood, Nicole, and Yang, Joyce (2011) Molecular phylogeny of Pholadoidea Lamarck, 1809 supports a single origin for xylotrophy (wood feeding) and xylotrophic bacterial endosymbiosis in Bivalvia. Molecular Phylogenetics and Evolution, 61 (2). pp. 245-254.

Mata, Leonardo , Gaspar, Helena, Justino, Fátima, and Santos, Rui (2011) Effects of hydrogen peroxide on the content of major volatile halogenated compounds in the red alga Asparagopsis taxiformis (Bonnemaisoniaceae). Journal of Applied Phycology, 23 (5). pp. 827-832.

Miller, Penny A., Fitch, Alison J., Gardner, Michael, Hutson, Kate S., and Mair, Graham (2011) Genetic population structure of Yellowtail Kingfish (Seriola lalandi) in temperate Australasian waters inferred from microsatellite markers and mitochondrial DNA. Aquaculture, 319 (3-4). pp. 328-336.

Hayakijkosol, O., La Fauce, K., and Owens, L. (2011) Experimental infection of redclaw crayfish (Cherax quadricarinatus) with Macrobrachium rosenbergii nodavirus, the aetiological agent of white tail disease. Aquaculture, 319 (1-2). pp. 25-29.

Tziouveli, Vasiliki, Bastos-Gomez, Giana, and Bellwood, Orpha (2011) Functional morphology of mouthparts and digestive system during larval development of the cleaner shrimp Lysmata amboinensis (de Man, 1888). Journal of Morphology, 272 (9). pp. 1080-1091.

Gribben, Paul E., Jeffs, Andrew G., de Nys, Rocky, and Steinberg, Peter D. (2011) Relative importance of natural cues and substrate morphology for settlement of the New Zealand Greenshell™ mussel, Perna canaliculus. Aquaculture, 319 (1-2). pp. 240-246.

Dang, Vinh T., Li, Yan, Speck, Peter, and Benkendorff, Kirsten (2011) Effects of micro and macroalgal diet supplementations on growth and immunity of greenlip abalone, Haliotis laevigata. Aquaculture, 320 (1-2). pp. 91-98.

De Santis, Christian, Wade, Nicholas M., Jerry, Dean R., Preston, Nigel P., Glencross, Brett D., and Sellars, Melony J. (2011) Growing backwards: an inverted role for the shrimp ortholog of vertebrate myostatin and GDF11. Journal of Experimental Biology, 214 (16). pp. 2671-2677.

Milione, Michael, and Southgate, Paul (2011) Environmental conditions and culture method effects on growth and survival of juvenile winged pearl oyster, Pteria Penguin. Journal of Shellfish Research, 30 (2). pp. 223-229.

Moorhead, Jonathan A., and Zeng, Chaoshu (2011) Breeding of the forktail blenny Meiacanthus atrodorsalis: broodstock management and larval rearing. Aquaculture, 318 (1-2). pp. 248-252.

Romano, Nicholas, and Zeng, Chaoshu (2011) Importance of balanced Na+/K+ ratios for blue swimmer crabs, Portunus pelagicus, to cope with elevated ammonia-N and differences between in vitro and in vivo gill Na+/K+-ATPase responses. Aquaculture, 318 (1-2). pp. 154-161.

Todd, Erica, Blair, David, Hamann, Mark, and Jerry, Dean (2011) Twenty-nine microsatellite markers for two Australian freshwater turtles, Elseya albagula and Emydura macquarii krefftii: development from 454-sequence data and utility in related taxa. Conservation Genetics Resources, 3 (3). pp. 449-456.

Owens, L., La Fauce, K., and Claydon, K. (2011) The effect of Penaeus merguiensis densovirus on Penaeus merguiensis production in Queensland, Australia. Journal of Fish Diseases, 34 (7). pp. 509-515.

McGinty, Erin L., Zenger, Kyall R., Taylor, Joseph U.U., Evans, Brad S., and Jerry, Dean R. (2011) Diagnostic genetic markers unravel the interplay between host and donor oyster contribution in cultured pearl formation. Aquaculture, 316 (1-4). pp. 20-24.

Hayakijkosol, Orachun, and Owens, Leigh (2011) Investigation into the pathogenicity of reovirus to juvenile Cherax quadricarinatus. Aquaculture, 316 (1-4). pp. 1-5.

Carl, Christina, Guenther, Jana, and Magne Sunde, Leif (2011) Larval release and attachment modes of the hydroid Ectopleura larynx on aquaculture nets in Norway. Aquaculture Research, 42 (7). pp. 1056-1060.

Fraser, M.R., and de Nys, R. (2011) A quantitative determination of deformities in barramundi (Lates calcarifer; Bloch) fed a vitamin deficient diet. Aquaculture Nutrition, 17 (3). pp. 235-243.

Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.

Le Vay, Lewis, Shelley, Colin, Zeng, Chaoshu, and Sorgeloos, Patrick (2011) International symposium on aquaculture, biology and management of commercially important crabs, Shanghai (China), 8–11 November 2009 (ISABMC-2009). Aquaculture International, 19 (2). pp. 215-216.

De Santis, Christian, Smith-Keune, Carolyn, and Jerry, Dean R. (2011) Normalizing RT-qPCR data: are we getting the right answers? An appraisal of normalization approaches and internal reference genes from a case study in the Finfish Lates calcarifer. Marine Biotechnology, 13 (2). pp. 170-180.

Milione, Michael, Saucedo, Pedro, and Southgate, Paul (2011) Sexual development, sex ratio and morphometrics of Pteria penguin (Bivalvia: Pteriidae), in north-eastern Australia. Molluscan Research, 31 (1). pp. 30-36.

De Santis, C., and Jerry, D.R. (2011) Differential tissue-regulation of myostatin genes in the teleost fish Lates calcarifer in response to fasting. Evidence for functional differentiation. Molecular and Cellular Endocrinology, 335 (2). 158-165 .

Bannister, Raymond, Hoogenboom, Mia, Anthony, Kenneth R. N., Battershill, Chris, Whalan, Stephen, Webster, Nicole, and De Nys, Rocky (2011) Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series, 423. pp. 95-100.

Shaddick, Kim, Gilligan, Dean M., Burridge, Christopher P., Jerry, Dean R., Truong, Kiet, and Beheregaray, Luciano B. (2011) Historic divergence with contemporary connectivity in a catadromous fish, the estuary perch (Macquaria colonorum). Canadian Journal of Fisheries and Aquatic Sciences, 68 (2). pp. 304-318.

Wu, Xugan, Wang, Zongkai, Cheng, Yong Xu, Zeng, Chaoshu, Yang, Xiaozhen, and Lu, Jianfeng (2011) Effects of dietary phospholipids and highly unsaturated fatty acids on the precocity, survival, growth and hepatic lipid composition of juvenile Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 457-468.

Hasbi, Ghitarina, de Nys, Rocky, Burns, Kathryn, Whalan, Stephen, and Dunlap, Walter C. (2011) Hepatic coenzyme Q redox balance of fishes as a potential bioindicator of environmental contamination by polycyclic aromatic hydrocarbons. Biology Letters, 7 (1). pp. 123-126.

Liu, Zhijun, Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, and Yang, Xiaozhen (2011) Ovarian re-maturation following the first spawning in the Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 417-426.

Munro, J., Callinan, R., and Owens, L. (2011) Gill-associated virus and its association with decreased production of Penaeus monodon in Australian prawn farms. Journal of Fish Diseases, 34 (1). pp. 13-20.

Scardino, Andrew J., and de Nys, Rocky (2011) Mini review: biomimetic models and bioinspired surfaces for fouling control. Biofouling, 27 (1). pp. 73-86.

Poppi, D.A., Quinton, V.M., Hua, K., and Bureau, D.P. (2011) Development of a test diet for assessing the bioavailability of arginine in feather meal fed to rainbow trout (Oncorhynchus mykiss). Aquaculture, 314 (1-4). pp. 100-109.

Milione, Michael, and Southgate, Paul (2011) Seasonal changes in recruitment of Pteria penguin in North Queensland, Australia. Journal of Shellfish Research, 30 (1). pp. 89-94.

Mills, David J., Adhuri, Dedi S., Phillips, Michael J., Ravikumar, Bangarusamy, and Padiyar, Arun P. (2011) Shocks, recovery trajectories and resilience among aquaculture-dependent households in post-tsunami Aceh, Indonesia. Local Environment, 16 (5). pp. 425-444.

Tziouveli, Vasiliki, Hall, Mike, and Smith, Greg (2011) The effect of maturation diets on the reproductive output of the white-striped cleaner shrimp, Lysmata amboinensis. Journal of the World Aquaculture Society, 42 (1). pp. 56-65.

Wassnig, Matthew, and Southgate, Paul (2011) The effects of egg stocking density and antibiotic treatment on survival and development of winged pearl oyster (Pteria Penguin, Röding 1798) embryos. Journal of Shellfish Research, 30 (1). pp. 103-107.

Welladsen, Heather M., Heimann, Kirsten, and Southgate, Paul C. (2011) The effects of exposure to near-future levels of ocean acidification on activity and byssus Production of the Akoya pearl oyster, Pinctada fucata. Journal of Shellfish Research, 30 (1). pp. 85-88.

Rusaini, and Owens, L. (2011) A simple technique to stage the moult of Penaeus monodon. Asian Fisheries Science, 24 (1). pp. 1-11.

Jones, Clive, Nguyen, Long Van, Dao, Hoc Tan, and Priyambodo, Bayu (2010) Exploitation of puerulus settlement for the development of tropical rock lobster aquaculture in the Indo-West Pacific. Journal of the Marine Biological Association of India, 52 (2). pp. 292-303.

Slater, M.J., Carton, A.G., and Jeffs, A.G. (2010) Highly localised distribution patterns of juvenile sea cucumber Australostichopus mollis. New Zealand Journal of Marine and Freshwater Research, 44 (4). pp. 201-216.

Welladsen, Heather M., Southgate, Paul C., and Heimann, Kirsten (2010) The effects of exposure to near-future levels of ocean acidification on shell characteristics of Pinctada fucata (Bivalvia: Pteriidae). Molluscan Research, 30 (3). pp. 125-130.

Camus, Thomas, and Zeng, Chaoshu (2010) Roles of microalgae on total egg production over female lifespan and egg incubation time, naupliar and copepodite survival, sex ratio and female life expectancy of the copepod Bestiolina similis. Aquaculture Research, 41 (11). pp. 1717-1726.

Mata, Leonardo, Schuenhoff, Andreas, and Santos, Rui (2010) A direct comparison of the performance of the seaweed biofilters, Asparagopsis armata and Ulva rigida. Journal of Applied Phycology, 22 (5). pp. 639-644.

Booth, Mark A., Allan, Geoff L., and Pirozzi, Igor (2010) Estimation of digestible protein and energy requirements of yellowtail kingfish Seriola lalandi using a factorial approach. Aquaculture, 307 (3-4). pp. 247-259.

Carton, Alexander G., and Vaughan, Melanie R. (2010) Behavioural and anatomical measures of visual acuity in first-feeding Yellowtail Kingfish (Seriola lalandi)larvae. Environmental Biology of Fishes, 89 (1). pp. 3-10.

Rusaini, and Owens, L. (2010) Insight into the lymphoid organ of penaeid prawns: a review. Fish and Shellfish Immunology, 29 (3). pp. 367-377.

Robinson, Nicholas Andrew, Schipp, Glenn, Bosmans, Jérôme, and Jerry, Dean Robert (2010) Modelling selective breeding in protandrous, batch-reared Asian sea bass (Lates calcarifer, Bloch) using walkback selection. Aquaculture Research, 41 (10). e643-e655.

Slater, Matthew J., and Carton, Alexander G. (2010) Sea cucumber habitat differentiation and site retention as determined by intraspecific stable isotope variation. Aquaculture Research, 41 (10). pp. 695-702.

Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Jerry, Dean R. (2010) The consequences of differential family survival rates and equalizing maternal contributions on the effective population size (Ne) of cultured silver-lipped pearl oysters, Pinctada maxima. Aquaculture Research, 41 (8). pp. 1229-1242.

Kvingedal, Renate, Evans, Brad S., Lind, Curtis E., Taylor, Joseph J.U., Dupont-Nivet, Mathilde, and Jerry, Dean R. (2010) Population and family growth response to different rearing location, heritability estimates and genotype×environment interaction in the silver-lip pearl oyster (Pinctada maxima). Aquaculture, 304 (1-4). pp. 1-6.

Rusaini, and Owens, L. (2010) Effect of moulting and lunar rhythms on the lymphoid organ spheroid (LOS) cells of the black tiger prawn (Penaeus monodon). Journal of Experimental Marine Biology and Ecology, 389 (1-2). pp. 6-12.

Wassnig, Matthew, Roberts, Rodney D., Krsinich, Anton, and Way, Robert W. (2010) Effects of water flow rate on growth rate, mortality and biomass return of abalone in slab tanks. Aquaculture Research, 41 (6). pp. 839-846.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Cui, Zhaoxia (2010) Reproductive performance and offspring quality of the first and the second brood of female swimming crab, Portunus Trituberculatus. Aquaculture, 303 (1-4). pp. 94-100.

Yang, Xiaozhen, Wang, Jinfeng, Fan, Peng, Zhao, Liulan, Cheng, Yongxu, Wu, Xugan, and Zeng, Chaoshu (2010) Survival, growth, sexual maturity and tissue histamine accumulation of the mysis, Neomysis awatschensis and N. japonica Nakazawa, fed histamine supplemented diets. Aquaculture, 302 (3-4). pp. 256-260.

McGinty, Erin L., Evans, Brad S., Taylor, Joseph U.U., and Jerry, Dean R. (2010) Xenografts and pearl production in two pearl oyster species, P. maxima and P. margaritifera: effect on pearl quality and a key to understanding genetic contribution. Aquaculture, 302 (3-4). pp. 175-181.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) A factorial approach to deriving dietary specifications and daily feed intake for mulloway, Argyrosomus japonicus, based on the requirements for digestible protein and energy. Aquaculture, 302 (3-4). pp. 235-242.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Yang, Xiaozhen (2010) Reproductive performance and offspring quality of wild-caught and pond-reared swimming crab Portunus trituberculatus broodstock. Aquaculture, 301 (1-4). pp. 78-84.

Romano, Nicholas, and Zeng, Chaoshu (2010) Changes to the histological gill structure and haemolymph composition of early blue swimmer crab Portunus pelagicus juveniles during elevated ammonia-N exposure and the post-exposure recovery. Aquaculture Research, 41 (4). pp. 468-480.

Wu, Xuang, Zhou, Bo, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Feng, Lang (2010) Comparison of gender differences in biochemical composition and nutritional value of various edible parts of the blue swimmer crab. Journal of Food Composition and Analysis, 23 (2). pp. 154-159.

Andrés, Mireia, Rotllant, Guiomar, and Zeng, Chaoshu (2010) Survival, development and growth of larvae of the blue swimmer crab, Portunus pelagicus, cultured under different photoperiod conditions. Aquaculture, 300 (1-4). pp. 218-222.

Wu, X., Chang, G., Cheng, Y., Zeng, C., Southgate, P.C., and Lu, J. (2010) Effects of dietary phospholipid and highly unsaturated fatty acid on the gonadal development, tissue proximate composition, lipid class and fatty acid composition of precocious Chinese mitten crab, Eriocheir sinensis. Aquaculture Nutrition, 16 (1). pp. 25-36.

Paisley, Larry G., Ariel, Ellen, Lyngstad, Trude, Jónsson, Gísli, Vennerström, Pia, Hellström, Anders, and Østergaard, Peter (2010) An overview of aquaculture in the Nordic countries. Journal of the World Aquaculture Society, 41 (1). pp. 1-17.

Cano-Gómez, Ana, Goulden, Evan F., Owens, Leigh, and Høj, Lone (2010) Vibrio owensii sp. nov., isolated from cultured crustaceans in Australia. FEMS Microbiology Reviews, 302 (2). pp. 175-181.

Hua, K., Birkett, S., De Lange, C.F.M., and Bureau, D.P. (2010) Adaptation of a non-ruminant nutrient-based growth model to rainbow trout (Oncorhynchus mykiss Walbaum). Journal of Agricultural Science, 148 (1). pp. 17-29.

Mamangkey, Noldy Gustaf F., Agatonovic, Snezana, and Southgate, Paul C. (2010) Assessing pearl quality using reflectance UV-Vis spectroscopy: does the same donor produce consistent pearl quality? Marine Drugs, 8 (9). pp. 2517-2525.

Li, Yan, Qin, Jian G., Li, Xiaoxu, and Benkendorff, Kirsten (2010) Assessment of metabolic and immune changes in postspawning Pacific oyster Crassostrea gigas: identification of a critical period of vulnerability after spawning. Aquaculture Research, 41 (9). e155-e165.

Moorhead, Jonathan A., and Zeng, Chaoshu (2010) Development of captive breeding techniques for marine ornamental fish: a review. Reviews in Fisheries Science, 18 (4). pp. 315-343.

Catalano, Sarah R., and Hutson, Kate S. (2010) Harmful parasitic crustaceans infecting wild arripids: A potential threat to southern Australian finfish aquaculture. Aquaculture, 303 (1-4). pp. 101-104.

Andrews, M., Battaglene, S., Cobcroft, J., Adams, M., Noga, E., and Nowak, B. (2010) Host response to the chondracanthid copepod Chondracanthus goldsmidi, a gill parasite of the striped trumpeter, Latris lineata (Forster), in Tasmania. Journal of Fish Diseases, 33 (3). pp. 211-220.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) Protein and energy utilization and the requirements for maintenance in juvenile mulloway (Argyrosomus japonicus). Fish Physiology and Biochemistry, 36 (1). pp. 109-121.

Hua, K., and Bureau, D.P. (2010) Quantification of differences in digestibility of phosphorus among cyprinids, cichlids, and salmonids through a mathematical modelling approach. Aquaculture, 308 (3-4). pp. 152-158.

Newton, James R., Smith-Keune, Carolyn, and Jerry, Dean R. (2010) Thermal tolerance varies in tropical and sub-tropical populations of barramundi (Lates calcarifer) consistent with local adaptation. Aquaculture, 308 (Supplement 1). S128-S132.

Bureau, Dominique P., and Hua, Katheline (2010) Towards effective nutritional management of waste outputs in aquaculture, with particular reference to salmonid aquaculture operations. Aquaculture Research, 41 (5). pp. 777-792.

Jones, Clive (2010) Tropical spiny lobster aquaculture development in Vietnam, Indonesia and Australia. Journal of the Marine Biological Association of India, 52 (2). pp. 304-315.

Pirozzi, I., Booth, M.A., and Allan, G.L. (2010) The interactive effects of dietary protein and energy on feed intake, growth and protein utilization of juvenile mulloway (Argyrosomus japonicus). Aquaculture Nutrition, 16 (1). pp. 61-71.

Duckworth, Alan R., Wolff, Carsten W., and Luter, Heidi (2009) Patterns of abundance and size across varying spatial scales for the coral reef sponge Coscinoderma matthewsi. Marine Ecology Progress Series, 396. pp. 27-33.

Camus, Thomas, Zeng, Chaoshu, and McKinnon, A. David (2009) Egg production, egg hatching success and population increase of the tropical paracalanid copepod, Bestiolina similis (Calanoida: Paracalanidae) fed different microalgal diets. Aquaculture, 297 (1). pp. 169-175.

Jones, Clive M. (2009) Temperature and salinity tolerances of the tropical spiny lobster, Panulirus ornatus. Journal of the World Aquaculture Society, 40 (6). pp. 744-752.

Gusmão, Luiz Felipe Mendes, and McKinnon, A. David (2009) The effect of food type and quantity on egg production and nucleic acid content of Acartia sinjiensis. Aquaculture, 296 (1-2). pp. 71-80.

Craven, Andrea, Carton, Alexander G., McPherson, Craig, and McPherson, Geoff (2009) Determining and quantifying components of an aquaculture soundscape. Aquacultural Engineering, 41 (3). pp. 158-165.

Partridge, G.J., Jenkins, G.I., Doupe, R.G., De Lestang, S., Ginbey, B.M., and French, D. (2009) Factors affecting mark quality of alizarin complexone-stained otoliths in juvenile black bream Acanthopagrus butcheri and a prescription for dosage. Journal of Fish Biology, 75 (6). pp. 1518-1523.

Nguyen, Thuy T.T., Davy, F. Brian, Rimmer, Michael A., and De Silva, Sena S. (2009) Use and exchange of genetic resources of emerging species for aquaculture and other purposes. Reviews in Aquaculture, 1 (3-4). pp. 260-274.

Pirozzi, Igor, and Booth, Mark A. (2009) The effect of temperature and body weight on the routine metabolic rate and postprandial metabolic response in mulloway, Argyrosomus japonicus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 154 (1). pp. 110-118.

Watson, Sue-Ann, Southgate, Paul C., Tyler, Paul A., and Peck, Lloyd (2009) Early larval development of the Sydney rock oyster Saccostrea glomerata under near-future predictions of CO2 driven ocean acidification. Journal of Shellfish Research, 28 (3). pp. 431-437.

Slater, Matthew J., and Carton, Alexander G. (2009) Effect of sea cucumber (Australostichopus mollis) grazing on coastal sediments impacted by mussel farm deposition. Marine Pollution Bulletin, 58 (8). pp. 1123-1129.

Holme, May-Helen, Brock, Ian, Southgate, Paul C., and Zeng, Chaoshu (2009) Effects of starvation and feeding on lipid class and fatty acid profile of late stage mud crab, Scylla serrata, larvae. Journal of the World Aquaculture Society, 40 (4). pp. 493-504.

Mamangkey, N. Gustaf F., and Southgate, Paul C. (2009) Regeneration of excised mantle tissue by the silver-lip pearl oyster, Pinctada maxima (Jameson). Fish and Shellfish Immunology, 27 (2). pp. 164-174.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Liying, Sui, Southgate, Paul, Zhou, Gang, and Bian, Wenji (2009) Reproductive performance and offspring quality of Chinese mitten crab Eriocheir sinensis (H. Milne-Edwards) females fed an optimized formulated diet and the razor clam Sinonovacula constricta. Aquaculture Research, 40 (12). pp. 1335-1349.

Guenther, Jana, Carl, Christina, and Sunde, Leif Magne (2009) The effects of colour and copper on the settlement of the hydroid Ectopleura larynx on aquaculture nets in Norway. Aquaculture, 292 (3-4). pp. 252-255.

Slater, Matthew J., Jeffs, Andrew G., and Carton, Alexander G. (2009) The use of the waste from green-lipped mussels as a food source for juvenile sea cucumber, Australostichopus mollis. Aquaculture, 292 (3-4). pp. 219-224.

Guy, Jeffrey A., Jerry, Dean R., and Rowland, Stuart J. (2009) Heterosis in fingerlings from a diallel cross between two wild strains of silver perch (Bidyanus bidyanus). Aquaculture Research, 40 (11). pp. 1291-1300.

Smith-Keune, Carolyn, and Jerry, Dean R. (2009) High levels of intra-specific variation in the NG repeat region of the Pinctada maxima N66 organic matrix protein. Aquaculture Research, 40 (9). pp. 1054-1063.

Romano, Nicholas, and Zeng, Chaoshu (2009) Evaluating the newly proposed protocol of incorporated potassium in nitrate toxicity experiments at different salinities: a case study with the tiger prawn, Penaeus monodon, juveniles. Aquaculture, 289 (3). pp. 304-309.

Lober, Malwine, and Zeng, Chaoshu (2009) Effect of microalgae concentration on larval survival, development and growth of an Australian strain of giant freshwater prawn Macrobrachium rosenbergii. Aquaculture, 289 (1). pp. 95-100.

Nankervis, L., and Southgate, P.C. (2009) Enzyme and acid treatment of fish meal for incorporation into formulated microbound diets for barramundi (Lates calcarifer) larvae. Aquaculture Nutrition, 15 (2). pp. 135-143.

Pirozzi, Igor, Booth, Mark A, and Pankhurst, Patricia M. (2009) The effect of stocking density and repeated handling on the growth of juvenile mulloway, Argyrosomus japonicus (Temminck & Schlegel 1843). Aquaculture International, 17 (2). pp. 199-205.

Pirozzi, Igor, and Booth, Mark A. (2009) The routine metabolic rate of mulloway (Argyrosomus japonicus: Sciaenidae) and yellowtail kingfish (Seriola lalandi: Carangidae) acclimated to six different temperatures. Comparative Biochemistry and Physiology: Part A, 152 (4). pp. 586-592.

Mamangkey, N. Gustav F., Acosta-Salmon, Hector, and Southgate, Paul C. (2009) Use of anaesthetics with the silver-lip pearl oyster, Pinctada maxima (Jameson). Aquaculture, 288 (3-4). pp. 280-284.

Camus, Thomas, and Zeng, Chaoshu (2009) The effects of stocking density on egg production and hatching success, cannibalism rate, sex ratio and population growth of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 287 (1). pp. 145-151.

Smith, Greg G., Hall, Michael W., and Salmon, Matthew (2009) Use of microspheres, fresh and microbound diets to ascertain dietary path, component size, and digestive gland functioning in phyllosoma of the spiny lobster Panulirus ornatus. New Zealand Journal of Marine and Freshwater Research, 43 (1). pp. 205-215.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul C. (2009) A review of recent progress toward development of a formulated microbound diet for mud crab, Scylla serrata, larvae and their nutritional requirements. Aquaculture, 286 (3). pp. 164-175.

Lind, Curtis E., Evans, Brad S., Knauer, Jens, Taylor, Joseph J.U., and Jerry, Dean R. (2009) Decreased genetic diversity and a reduced effective population size in cultured silver-lipped pearl oysters (Pinctada maxima). Aquaculture, 286 (1-2). pp. 12-19.

Li, Yan, Qin, Jian G., Li, Xiaoxu, and Benkendorff, Kirsten (2009) Spawning-dependent stress response to food deprivation in Pacific oyster Crassostrea gigas. Aquaculture, 286 (3-4). pp. 309-317.

Edmunds, Richard C., van Herwerden, Lynne, Smith-Keune, Carolyn, and Jerry, Dean R. (2009) Comparative characterization of a temperature responsive gene (lactate dehydrogenase-B, ldh-b) in two congeneric tropical fish, Lates calcarifer and Lates niloticus. International Journal of Biological Sciences, 5 (6). pp. 558-569.

Hua, Katheline, and Bureau, Dominique P. (2009) Development of a model to estimate digestible lipid content of salmonid fish feeds. Aquaculture, 286 (3-4). pp. 271-276.

Cobcroft, Jennifer M., and Battaglene, Stephen C. (2009) Jaw malformation in striped trumpeter Latris lineata larvae linked to walling behaviour and tank colour. Aquaculture, 289 (3-4). pp. 274-282.

Owens, Leigh, La Fauce, Kathy , Juntunen, Karen, Hayakijkosol, Orachun, and Zeng, Chaoshu (2009) Macrobrachium rosenbergii nodavirus disease (white tail disease) in Australia. Diseases of Aquatic Organisms, 85 (3). pp. 175-180.

Li , Yan, Qin, Jian G., Li, Xiaoxu, and Benkendorff, Kirsten (2009) Monthly variation of condition index, energy reserves and antibacterial activity in Pacific oysters, Crassostrea gigas, in Stansbury (South Australia). Aquaculture, 286 (1-2). pp. 64-71.

Tziouveli, Vasiliki, and Smith, Greg (2009) Sexual maturity and environmental sex determination in the white-striped cleaner shrimp Lysmata amboinensis. Invertebrate Reproduction and Development, 53 (3). pp. 155-163.

Li, Yan, Qin, Jian G., Li, Xiaoxu, and Benkendorff, Kirsten (2009) Spawning-dependent stress responses in pacific oysters Crassostrea gigas: a simulated bacterial challenge in oysters. Aquaculture, 293 (3-4). pp. 164-171.

Bell, Johann D., Clua, Eric, Hair, Cathy A., Galzin, Rene, and Doherty, Peter J. (2009) The capture and culture of post-larval fish and invertebrates for the marine ornamental trade. Reviews in Fisheries Science, 17 (2). pp. 223-240.

Hua, Katheline, and Bureau, Dominique P. (2009) A mathematical model to explain variations in estimates of starch digestibility and predict digestible starch content of salmonid fish feeds. Aquaculture, 294 (3-4). pp. 282-287.

de Paula Silva, Pedro H., McBride, S., de Nys, Rocky, and Paul, Nicholas (2008) Integrating filamentous 'green tide' algae into tropical pond-based aquaculture. Aquaculture, 284 (1-4). pp. 74-80.

Norris, A., Foyle, L., and Ratcliff, J. (2008) Heritability of mortality in response to a natural pancreas disease (SPDV) challenge in Atlantic salmon, Salmo salar L., post-smolts on a West of Ireland sea site. Journal of Fish Diseases, 31 (12). pp. 913-920.

Carton, Guy, and Slater, Matthew (2008) Utilising the wastestream: determinning the suitability of the sea cucumber Stichopus mollis for co-culture with Greenshell mussels. World Aquaculture, 39 (4). pp. 17-19.

Figueiredo, Joana, Penha-Lopes, Gil, Lin, Junda, and Narciso, Luís (2008) Productivity and profitability of Mithraculus forceps aquaculture. Aquaculture, 283 (1-4). pp. 43-49.

Figueroa, Félix L., Bueno, Agustín, Korbee, Nathalie, Santos, Rui, Mata, Leonardo, and Schuenhoff, Andreas (2008) Accumulation of mycosporine-like amino acids in Asparagopsis armata grown in tanks with fishpond effluents of gilthead sea bream, Sparus aurata. Journal of the World Aquaculture Society, 39 (5). pp. 692-699.

Paul, Nicholas, and de Nys, Rocky (2008) Promise and pitfalls of locally abundant seaweeds as biofilters for integrated aquaculture. Aquaculture, 281 (1-4). pp. 49-55.

Camus, Thomas, and Zeng, Chaoshu (2008) Effects of photoperiod on egg production and hatching success, naupliar and copepodite development, adult sex ratio and life expectancy of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 280 (1-4). pp. 220-226.

Kvingedal, Renate, Evans, Bradley S., Taylor, Joseph J.U., Knauer, Jens, and Jerry, Dean R. (2008) Family by environment interactions in shell size of 43-day old silver-lip pearl oyster (Pinctada maxima), five families reared under different nursery conditions. Aquaculture, 279 (1-4). pp. 23-28.

Fielder, D. Stewart, Allan, Geoff L., and Pankhurst, Patricia M. (2008) Comparison of two environmental regimes for culture of Australian snapper, Pagrus auratus, larvae in commercial-scale tanks. Journal of the World Aquaculture Society, 39 (3). pp. 364-374.

Visvanathan, C., Phong, D.D., and Jegatheesan, V. (2008) Hydrogenotrophic denitrification of highly saline aquaculture wastewater using hollow fiber membrane bioreactor. Environmental Technology, 29 (6). pp. 701-707.

Visvanathan, C., Hung, N.Q., and Jegatheesan, V. (2008) Hydrogenotrophic denitrification of synthetic aquaculture wastewater using membrane bioreactor. Process Biochemistry, 43 (6). pp. 673-682.

Ballagh, D.A., Pankhurst, P.M., and Fielder, D.S. (2008) Photoperiod and feeding interval requirements of juvenile mulloway, Argyrosomus japonicus. Aquaculture, 277 (1-2). pp. 52-57.

Jamal Khan, S., Visvanathan, C., Jegatheesan, V., and BenAim, R. (2008) Influence of mechanical mixing rates on sludge characteristics and membrane fouling in MBRs. Separation Science and Technology, 43 (7). pp. 1826-1838.

Tan, Matthew (2008) Water quality and the ornamental aquatic sector. Aquarama Magazine, 5 (10). pp. 8-11.

La Fauce, Kathy A., and Owens, Leigh (2008) The use of insects as a bioassay for Penaeus merguiensis densovirus (PmergDNV). Journal of Invertebrate Pathology, 98 (1). pp. 1-6.

McGinty, Erin L., Smith-Keune, Carolyn, and Jerry, Dean R. (2008) A high through-put protocol for quantifying nucleic acids in individual microcrustaceans using new generation RNA and DNA specific dyes. Journal of Shellfish Research, 27 (2). pp. 449-455.

Milione, Michael, and Zeng, Chaoshu (2008) The effects of temperature and salinity on population growth and egg hatching success of the tropical calanoid copepod, Acartia sinjiensis. Aquaculture, 275 (1-4). pp. 116-123.

Pankhurst, N.W., Ludke, S.L., King, H.R., and Peter, R.E. (2008) The relationship between acute stress, food intake, endocrine status and life history stage in juvenile farmed Atlantic salmon, Salmo salar. Aquaculture, 275 (1-4). pp. 311-318.

Figueiredo, Joana, Penha-Lopes, Gil, Narciso, Luís, and Lin, Junda (2008) Effect of starvation during late megalopa stage of Mithraculus forceps (Brachyura: Majidae) on larval duration, synchronism of metamorphosis, survival to juvenile, and newly metamorphosed juvenile size. Aquaculture, 274 (1). pp. 175-180.

Lee, Anne M., Williams, Ashley J., and Southgate, Paul C. (2008) Modelling and comparison of growth of the silver-lip pearl oyster Pinctada maxima (Jameson) (Mollusca: Pteriidae) cultured in West Papua, Indonesia. Marine and Freshwater Research, 59. pp. 22-31.

Jegatheesan, V., Steicke, C., Pulefou, T., Zeng, C., and Shu, L. (2008) Recirculating aquaculture systems (RAS): performance of granular media filtration and membrane bioreactors. Journal of Science, Technology and Management, 1 (1). pp. 31-45.

Romano, Nicholas, and Zeng, Chaoshu (2008) Blue swimmer crabs: emerging species in Asia. Global Aquaculture Advocate, 11 (3). pp. 34-36.

Beer, Andrew C., and Southgate, Paul C. (2008) Effect of mesh coverings on retention and growth of blacklip pearl oyster (Pinctada margaritifera) spat during early nursery culture. Aquatic Living Resources, 21 (4). pp. 441-445.

Johnston, Matthew D., Johnston, Danielle J., and Jones, Clive M. (2008) Evaluation of partial replacement of live and fresh feeds with a formulated diet and the influence of weaning Panulirus ornatus phyllosomata onto a formulated diet during early ontogeny. Aquaculture International, 16 (1). pp. 33-47.

Dworjanyn, Symon A., and Pirozzi, Igor (2008) Induction of settlement in the sea urchin Tripneustes gratilla by macroalgae, biofilms and conspecifics: a role for bacteria? Aquaculture, 274 (2-4). pp. 268-274.

de Santis, Christian, Evans, Brad S., Smith-Keune, Carolyn, and Jerry, Dean R. (2008) Molecular characterization, tissue expression and sequence variability of the barramundi (Lates calcarifer) myostatin gene. BMC Genomics, 9. pp. 82-96.

Ueda, Ryutaro, Krabsetsve, Kjersti, and Owens, Leigh (2008) Polymerase chain reaction detection of Taura Syndrome virus and infectious hypodermal and haematopoietic necrosis virus in frozen commodity tails of Penaeus vannamei Boone. Aquaculture Research, 39 (15). pp. 1606-1611.

Repullés-Albelda, Aigües, Montero, Francisco E., Holzer, Astrid S., Ogawa, Kazuo, Hutson, Kate S., and Raga, Juan A. (2008) Speciation of the Paradeontacylix spp. (Sanguinicolidae) of Seriola dumerili. Two new species of the genus Paradeontacylix from the Mediterranean. Parasitology International, 57 (3). pp. 405-414.

Bureau, Dominique P., Hua, Katheline, and Harris, Andrew M. (2008) The effect of dietary lipid and long-chain n-3 PUFA levels on growth, energy utilization, carcass quality, and immune function of rainbow trout, Oncorhynchus mykiss. Journal of the World Aquaculture Society, 39 (1). pp. 1-21.

Hua, Katheline, de lange, Cornelis F.M., Niimi, Arthur J., Cole, Gordon, Moccia, Richard D., Fan, Ming Z., and Bureau, Dominique P. (2008) A factorial model to predict phosphorus waste output of rainbow trout (Oncorhynchus mykiss). Aquaculture Research, 39 (10). pp. 1059-1068.

Wu, Xugan, Cheng, Yongxu, Sui, Liying, Zeng, Chaoshu, Southgate, Paul C., and Yang, Xiaozhen (2007) Effect of dietary supplementation of phospholipids and highly unsaturated fatty acids on reproductive performance and offspring quality of Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards), female broodstock. Aquaculture, 273 (4). pp. 602-613.

Milione, Michael, and Zeng, Chaoshu (2007) The effects of algal diets on population growth and egg hatching success of the tropical calanoid copepod, Acartia sinjiensis. Aquaculture, 273 (4). pp. 656-664.

Romano, Nicholas, and Zeng, Chaoshu (2007) Effects of potassium on nitrate mediated alterations of osmoregulation in marine crabs. Aquatic Toxicology, 85 (3). pp. 202-208.

Holme, M-H., Southgate, P.C., and Zeng, C. (2007) Assessment of dietary lecithin and cholesterol requirements of mud crab, Scylla serrata, megalopa using semi-purified microbound diets. Aquaculture Nutrition, 13 (6). pp. 413-423.

Steicke, C., Jegatheesan, V., and Zeng, C. (2007) Mechanical mode floating medium filters for recirculating systems in aquaculture for higher solids retention and lower freshwater usage. Bioresource Technology, 98 (17). pp. 3375-3383.

Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Jerry, Dean R. (2007) Population genetics of a marine bivalve, Pinctada maxima, throughout the Indo-Australian Archipelago shows differentiation and decreased diversity at range limits. Molecular Ecology, 16 (24). pp. 5193-5203.

De Santis, Christian, and Jerry, Dean R. (2007) Candidate growth genes in finfish - where should we be looking? Aquaculture, 272 (1-4). pp. 22-38.

Slater, Matthew J, and Carton, Alexander G. (2007) Survivorship and growth of the sea cucumber Australostichopus (Stichopus) mollis (Hutton 1872) in polyculture trials with green-lipped mussel farms. Aquaculture, 272 (1). pp. 389-398.

Fielder, D. Stewart, Allan, Geoff L., Pepperall, Debbie, and Pankhurst, Patricia M. (2007) The effects of changes in salinity on osmoregulation and chloride cell morphology of juvenile Australian snapper, Pagrus auratus. Aquaculture, 272 (1-4). pp. 656-666.

Cooper, A., Layton, R., Owens, L., Ketheesan, N., and Govan, B. (2007) Evidence for the classification of a crayfish pathogen as a member of the genus Coxiella. Letters in Applied Microbiology, 45 (5). pp. 558-563.

Louden, D., Inderbitzin, Stefanie, Peng, Z., and de Nys, R. (2007) Development of a new protocol for testing bath sponge quality. Aquaculture, 271 (1-4). pp. 275-285.

La Fauce, Kathy, and Owens, Leigh (2007) Investigation into the pathogenicity of Penaeus merguiensis densovirus (PmergDNV) to juvenile Cherax quadricarinatus. Aquaculture, 271 (1-4). pp. 31-38.

Hutson, K.S., Ernst, I., and Whittington, I.D. (2007) Risk assessment for metazoan parasites of yellowtail kingfish Seriola lalandi (Perciformes: Carangidae) in South Australian sea-cage aquaculture. Aquaculture, 271 (1-4). pp. 85-99.

Romano, Nicholas, and Zeng, Chaoshu (2007) Acute toxicity of ammonia and its effects on the haemolymph osmolality, ammonia-N, pH and ionic composition of early juvenile mud crabs, Scylla serrata (Forskål). Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 148 (2). pp. 278-285.

Nurdiani, Rahmi, and Zeng, Chaoshu (2007) Effects of temperature and salinity on the survival and development of mud crab, Scylla serrata (Forsskål), larvae. Aquaculture Research, 38 (14). pp. 1529-1538.

Zeng, Chaoshu (2007) Induced out-of-season spawning of the mud crab, Scylla paramamosain (Estampador) and effects of temperature on embryo development. Aquaculture Research, 38 (14). pp. 1478-1485.

Genodepa, Jerome, Zeng, Chaoshu, and Southgate, Paul C. (2007) Influence of binder type on leaching rate and ingestion of microbound diets by mud crab, Scylla serrata (Forsskål), larvae. Aquaculture Research, 38 (14). pp. 1486-1494.

Louden, D., Whalan, S., Evans-Illidge, E., Wolff, C., and de Nys, R. (2007) An assessment of the aquaculture potential of the tropical sponges Rhopaloeides odorabile and Coscinoderma sp. Aquaculture, 270 (1-4). pp. 57-67.

Li, Yan, Qin, Jian G., Abbott, Catherine A., Li, Xiaoxu, and Benkendorff, Kirsten (2007) Synergistic impacts of heat shock and spawning on the physiology and immune health of Crassostrea gigas: an explanation for summer mortality in Pacific oysters. American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 293 (6). pp. 2353-2362.

Holme, May-Helen, Southgate, Paul C., and Zeng, Chaoshu (2007) Survival, development and growth response of mud crab, Scylla serrata, megalopae fed semi-purified diets containing various fish oil:corn oil ratios. Aquaculture, 269 (1-4). pp. 427-435.

Romano, Nicholas, and Zeng, Chaoshu (2007) Acute toxicity of sodium nitrate, potassium nitrate, and potassium chloride and their effects on the hemolymph composition and gill structure of early juvenile blue swimmer crabs (Portunus pelagicus Linnaeus, 1758) (Decapoda, Brachyura, Portunidae). Environmental Toxicology and Chemistry, 26 (9). pp. 1955-1962.

Bannister, R.J., Brinkman, R., Wolff, C., Battershill, C., and de Nys, R. (2007) The distribution and abundance of dictyoceratid sponges in relation to hydrodynamic features: identifying candidates and environmental conditions for sponge aquaculture. Marine and Freshwater Research, 58 (7). pp. 624-633.

La Fauce, Kathy A., Elliman, Jennifer, and Owens, Leigh (2007) Molecular characterisation of hepatopancreatic parvovirus (PmergDNV) from Australian Penaeus merguiensis. Virology, 362 (2). pp. 397-403.

Romano, Nicholas, and Zeng, Chaoshu (2007) Ontogenetic changes in tolerance to acute ammonia exposure and associated gill histological alterations during early juvenile development of the blue swimmer crab, Portunus pelagicus. Aquaculture, 266 (1-4). pp. 246-254.

Munro, James, and Owens, Leigh (2007) Yellow head-like viruses affecting the penaeid aquaculture industry: a review. Aquaculture Research, 38 (9). pp. 893-908.

Penha-Lopes, Gil, Figueiredo, Joana, and Narciso, Luís (2007) Modelling survival and growth of Mithraculus forceps' larvae and juveniles (A. Milne Edwards, 1875) (Decapoda: Brachyura: Majidae) in aquaculture. Aquaculture, 264 (1-4). pp. 285-296.

La Fauce, Kathy A., Layton, Ramon, and Owens, Leigh (2007) TaqMan real-time PCR for detection of hepatopancreatic parvovirus from Australia. Journal of Virological Methods, 140 (1-2). pp. 10-16.

Carton, A.G., Jeffs, A.G., Foote, G., Palmer, H., and Bilton, J. (2007) Evaluation of methods for assessing the retention of seed mussels (Perna canaliculus) prior to seeding for grow-out. Aquaculture, 262 (2-4). pp. 521-527.

Munro, James, and Owens, Leigh (2007) Production of polyclonal and monoclonal antibodies against gill-associated virus and the development of an ELISA. Aquaculture, 262 (2-4). pp. 173-182.

Acosta-Salmón, Héctor , Jerry, Dean R., and Southgate, Paul C. (2007) Effects of cryoprotectant agents and freezing protocol on motility of black-lip pearl oyster (Pinctada margaritifera L.) spermatozoa. Cryobiology, 54 (1). pp. 13-18.

King, H.R., Pankhurst, N.W., and Watts, M. (2007) Reproductive sensitivity to elevated water temperatures in female Atlantic salmon is heightened at certain stages of vitellogenesis. Journal of Fish Biology, 70 (1). pp. 190-205.

Kaunda, Emmanuel K.W., Anderson, Jessica L., Kang'ombe, Jeremiah, and Jere, Wilson W.L. (2007) Effect of clear plastic pond sheeting on water temperatures and growth of Tilapia rendalli in earthen ponds. Aquaculture Research, 38. pp. 1113-1116.

Raine, J.C., Hua, K., Bureau, D.P., Vijayan, M.M., and Leatherland, J.F. (2007) Influence of ration level and rearing temperature on hepatic GHR1 and 2, and hepatic and intestinal TR alpha and TR beta gene expression in late stages of rainbow trout embryos. Journal of Fish Biology, 71 (1). pp. 148-162.

Li , Yan, Li, Xiaoxu, and Qin, Jian G. (2007) Triploidy induction in Australian greenlip abalone Haliotis laevigata (Donovan) with cytochalasin B. Aquaculture Research, 38 (5). pp. 487-492.

Doupe, R.G. (2007) Where are they now? A baseline distributional description of introduced redclaw crayfish Cherax quadricarinatus (von Marens) in the east Kimberley region. Journal of the Royal Society of Western Australia, 90. pp. 215-218.

Dworjanyn, Symon A., Pirozzi, Igor, and Liu, Wenshan (2007) The effect of the addition of algae feeding stimulants to artificial diets for the sea urchin Tripneustes gratilla. Aquaculture, 273 (4). pp. 624-633.

Tang, Danny, Andrews, Melanie, and Cobcroft, Jennifer (2007) The first Chondracanthid (Copepoda : Cyclopoida) reported from cultured finfish, with a revised key to the species of Chondracanthus. Journal of Parasitology, 93 (4). pp. 788-795.

Figueiredo, Joana, and Narciso, Luís (2006) Productivity improvement of Lysmata seticaudata (Risso, 1816) larval rearing protocol through modelling. Aquaculture, 261 (4). pp. 1249-1258.

McLoughlin, M.F., Graham, D.A., Norris, A., Matthews, D., Foyle, L., Rowley, H.M., Jewhurst, H., MacPhee, J., and Todd, D. (2006) Virological, serological and histopathological evaluation of fish strain susceptibility to experimental infection with salmonid alphavirus. Diseases of Aquatic Organisms, 72 (2). pp. 125-133.

Evans, B.S., Knauer, J., Taylor, J.U., and Jerry, D.R. (2006) Development and characterization of six new microsatellite markers for the silver-or gold-lipped pearl oyster, Pinctada maxima (Pteriidae). Molecular Ecology Notes, 6 (3). pp. 835-837.

Penha-Lopes, Gil, Rhyne, Andrew L., Figueiredo, Joana, Lin, Junda, and Narciso, Luís (2006) Can larvae produced from stored sperm in the ornamental crab Mithraculus forceps (A. Milne Edwards, 1875) (Decapoda: Brachyura: Majidae) be used in aquaculture? Aquaculture, 257 (1-4). pp. 282-286.

Guenther, J., Southgate, P.C., and de Nys, R. (2006) The effect of age and shell size on accumulation of fouling organisms on the Akoya pearl oyster Pinctada fucata (Gould). Aquaculture, 253 (1). pp. 366-373.

Acosta-Salmon, Héctor, and Southgate, Paul C. (2006) Wound healing after excision of mantle tissue from the Akoya pearl oyster, Pinctada fucata. Comparative Biochemistry and Physiology-Part A: molecular & integrative physiology, 143 (2). pp. 264-268.

Lymbery, Alan J., Doupé, Robert G., Bennett, Thomas, and Starcevich, Mark R. (2006) Efficacy of a subsurface-flow wetland using the estuarine sedge Juncus kraussii to treat effluent from inland saline aquaculture. Aquacultural Engineering, 34. pp. 1-7.

Battaglene, S.C., Morehead, D.T., Cobcroft, J.M., Nichols, P.D., Browne, M.R., and Carson, J. (2006) Combined effects of feeding enriched rotifers and antibiotic addition on performance of striped trumpeter (Latris lineata) larvae. Aquaculture, 251 (2-4). pp. 456-471.

Bureau, Dominique P., Hua, Katheline, and Cho, C. Young (2006) Effect of feeding level on growth and nutrient deposition in rainbow trout (Oncorhynchus mykiss Walbaum) growing from 150 to 600g. Aquaculture Research, 37 (11). pp. 1090-1098.

Pujolar, J.M., Maes, G.E., Vancoillie, C., and Volckaert, F.A.M. (2006) Environmental stress and life-stage dependence on the detection of heterozygosity–fitness correlations in the European eel, Anguilla anguilla. Genome, 49 (11). pp. 1428-1437.

Liu, W., Heasman, M., Simpson, R., Dworjanyn, S., and Pirozzi, I. (2006) Growth and feeding in juvenile triploid and diploid blacklip abalone, Haliotis rubra (Leach, 1814), at two temperatures. Aquaculture Nutrition, 12 (6). pp. 410-417.

Hua, K., and Bureau, D.P. (2006) Modelling digestible phosphorus content of salmonid fish feeds. Aquaculture, 254 (1-4). pp. 455-465.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul (2006) Towards development of formulated diets for mud crab larvae and a better understanding of their nutritional requirements. Aqua Feeds: Formulation & beyond, 3 (1). pp. 3-6.

Nankervis, L., and Southgate, P.C. (2006) The influence of dietary protein and energy levels on growth, survival and thyroid hormone (T3 and T4) composition of Lates calcarifer larvae. Aquaculture Nutrition, 12 (3). pp. 219-226.

Carton, Alexander G. (2005) The impact of light intensity and algal-induced turbidity on first-feeding Seriola lalandi larvae. Aquaculture Research, 36 (16). pp. 1588-1594.

Fraser, M.R., and de Nys, R. (2005) The morphology and occurrence of jaw and operculum deformities in cultured barramundi (Lates calcarifer) larvae. Aquaculture, 250 (1-2). pp. 496-503.

Fielder, D. Stewart, Bardsley, William J., Allan, Geoff L., and Pankhurst, Patricia M. (2005) The effects of salinity and temperature on growth and survival of Australian snapper, Pagrus auratus larvae. Aquaculture, 250 (1-2). pp. 201-214.

Gui-Zhong, Wang, Shao-Jing, Li, Chao-shu, Zeng, Shu-Jun, Lin, Xiang-Hui, Kong, Chun-Xiang, Ai, and Qiong-Wu, Lin (2005) Status of biological studies and aquaculture development of the mud crab, scylla serrata, in China: an experimental ecological studies. Aquaculture International, 13 (5). pp. 459-468.

Doupe, Robert G., and Lymbery, Alan J. (2005) Environmental risks associated with beneficial end uses of mine lakes in southwestern Australia. Mine Water and the Environment, 24 (3). pp. 134-138.

Huggett, Megan J., de Nys, Rocky, Williamson, Jane E., Heasman, Mike, and Steinberg, Peter D. (2005) Settlement of larval blacklip abalone, Haliotis rubra, in response to green and red macroalgae. Marine Biology, 147 (5). pp. 1155-1163.

Acosta-Salmon, Hector, and Southgate, Paul C. (2005) Histological changes in the gonad of the blacklip pearl oyster (Pinctada margaritifera Linnaeus, 1758) during the reproductive season in North Queensland, Australia. Molluscan Research, 25 (2). pp. 71-74.

Jerry, Dean R., Purvis, Ian W., Piper, Laurie R., and Dennis, Chris A. (2005) Selection for faster growth in the freshwater crayfish Cherax destructor. Aquaculture, 247 (1-4). pp. 169-176.

Robertson, D.R., Ackerman, J.L., Choat, J.H., Posada, J.M., and Pitt, J. (2005) Ocean surgeonfish Acanthurus bahianus. I. The geography of demography. Marine Ecology Progress Series, 295. pp. 229-244.

Robertson, D.R., Choat, J.H., Posada, J.M., Pitt, J., and Ackerman, J.L. (2005) Ocean surgeonfish Acanthurus bahianus. II. Fishing effects on longevity, size and abundance? Marine Ecology Progress Series, 295. pp. 245-256.

Acosta-Salmón, Héctor, and Southgate, Paul C. (2005) Mantle regeneration in the pearl oysters Pinctada fucata and Pinctada margaritifera. Aquaculture, 246 (1-4). pp. 447-453.

Acosta-Salmón, Héctor, Martínez-Fernández, Erika, and Southgate, Paul C. (2005) Use of relaxants to obtain saibo tissue from the blacklip pearl oyster (Pinctada margaritifera) and the Akoya pearl oyster (Pinctada fucata). Aquaculture, 246 (1-4). pp. 167-172.

Smith, Alastair, Chan, Shu Jin, and Gutierrez, Joaquim (2005) Autoradiographic and immunohistochemical localization of insulin-like growth factor-I receptor binding sites in brain of the brown trout, Salmo trutta. General and Comparative Endocrinology , 141 (3). pp. 203-213.

Ruscoe, I.M., Jones, C.M., Jones, P.L., and Caley, P. (2005) The effects of various binders and moisture content on pellet stability of research diets for freshwater crayfish. Aquaculture Nutrition, 11 (2). pp. 87-93.

Calado, R., Figueiredo, J., Rosa, R., Nunes, M.L., and Narciso, L. (2005) Effects of temperature, density, and diet on development, survival, settlement synchronism, and fatty acid profile of the ornamental shrimp Lysmata seticaudata. Aquaculture, 245 (1-4). pp. 221-237.

Watts, M., Pankhurst, N.W., King, H.R., and Geraghty, D.P. (2005) Differential effects of temperature and maturity stage on hepatic estrogen receptor characteristics of Atlantic salmon. Comparative Biochemistry and Physiology-Part A: molecular & integrative physiology, 140 (3). pp. 377-383.

Saucedo, Pedro E., Bervera-Leon, Horacio, Monteforte, Mario, Southgate, Paul C., and Monsalvo-Spencer, Pablo (2005) Factors influencing recruitment of hatchery reared pearl oyster (Pinctada Mazatlanica; Hanley 1856) spat. Journal of Shellfish Research, 24 (1). pp. 215-219.

Doupe, Robert G., and Lymbery, Alan J. (2005) Additive genetic and other sources of variation in growth traits of juvenile black bream Acanthopagrus butcheri. Aquaculture Research, 36 (7). pp. 621-626.

Hua, Katheline, Liu, Linjuan, and Bureau, Dominique P. (2005) Determination of phosphorus fractions in animal protein ingredients. Journal of Agricultural and Food Chemistry, 53 (5). pp. 1571-1574.

Rabbani, Abed Golam, and Zeng, Chaoshu (2005) Effects of tank colour on larval survival and development of mud crab Scylla serrata (Forskal). Aquaculture Research, 36 (11). pp. 1112-1119.

Doupe, Robert G., and Lymbery, Alan J. (2005) Genetic covariation in production traits of sub-adult black bream Acanthopagrus butcheri after grow-out. Aquaculture Research, 36 (11). pp. 1128-1132.

Pujolar, J.M., Maes, G.E., Vancoillie, C., and Volckaert, F.A.M. (2005) Growth rate correlates to individual heterozygosity in the european eel, Anguilla anguilla L. Evolution, 59 (1). pp. 189-199.

Munro, James, and Owens, Leigh (2005) Haemagglutination as a low-cost detection method for gill-associated virus and by inference, yellowhead virus in Penaeus monodon Fabricius, 1798. Aquaculture Research, 36 (14). pp. 1369-1373.

McDowall, R.M., and Pankhurst, N.W. (2005) Loss of negative eye-size allometry in a population of Aplochiton zebra (Teleostei: Galaxiidae) from the Falkland Islands. New Zealand Journal of Zoology, 32 (1). pp. 17-22.

Doupe, Robert G., Morgan, David L., and Gill, Howard S. (2005) Prospects for a restorative fishery enhancement of Lake Kununurra: a high-level tropical impoundment on the Ord River, Western Australia. Pacific Conservation Biology, 11 (2). pp. 136-146.

Fraser, M.R., Anderson, T.A., and de Nys, R. (2004) Ontogenic development of the spine and spinal deformities in larval barramundi (Lates calcarifer) culture. Aquaculture, 242 (1-4). pp. 697-711.

Pujolar, J.M., Maes, G.E., and Volckaert, F.A.M. (2004) Distribution of genetic variation in farmed and natural stocks of European eel. Journal of Fish Biology, 65 (Supplement s1). pp. 333-334.

Doupe, R.G., Morgan, D.L., Gill, H.S., and Rowland, A.J. (2004) Introduction of redclaw crayfish Cherax quadricarinatus (von Martens)to Lake Kununurra, Ord River, Western Australia: prospects for a ‘yabby’ in the Kimberley. Journal of the Royal Society of Western Australia, 87 (4). pp. 187-191.

Doupe, Robert G., and Lymbery, Alan J. (2004) Indicators of genetic variation for feed conversion efficiency in black bream. Aquaculture Research, 35 (14). pp. 1305-1309.

Taylor, Joseph J., Southgate, Paul C., and Rose, Robert A. (2004) Effects of salinity on growth and survival of silver-lip pearl oyster, Pinctada maxima, spat. Journal of Shellfish Research, 23 (2). pp. 375-377.

McPhee, Cameron P., Jones, C.M., and Shanks, Scott A. (2004) Selection for increased weight at 9 months in redclaw crayfish (Cherax quadricarinatus). Aquaculture, 237 (1-4). pp. 131-140.

Genodepa, Jerome, Zeng, Chaoshu, and Southgate, Paul C. (2004) Preliminary assessment of a microbound diet as an Artemia replacement for mud crab, Scylla serrata, megalopa. Aquaculture, 236 (1-4). pp. 497-509.

Acosta-Salmon, Hector, Martinez-Fernandez, Erika, and Southgate, Paul C. (2004) A new approach to pearl oyster broodstock selection: can saibo donors be used as future broodstock? Aquaculture, 231 (1 - 4). pp. 205-214.

Genodepa, Jerome, Southgate, Paul C., and Zeng, Chaoshu (2004) Diet particle size preference and optimal ration for mud crab, Scylla serrata, larvae fed microbound diets. Aquaculture, 230 (1-4). pp. 493-505.

Bransden, M.P., Cobcroft, J.M., Battaglene, S.C., Dunstan, G.A., Nichols, P.D., and Bell, J.G. (2004) Dietary arachidonic acid alters tissue fatty acid profile, whole body eicosanoid production and resistance to hypersaline challenge in larvae of the temperate marine fish, striped trumpeter (Latris lineata). Fish Physiology and Biochemistry, 30 (3-4). pp. 241-256.

Bransden, M.P., Dunstan, G.A., Battaglene, S.C., Cobcroft, J.M., Morehead, D.T., Kolkovski, S., and Nichols, P.D. (2004) Influences of dietary n-3 long-chain PUFA on body concentrations of 20 : 5n-3, 22 : 5n-3, and 22 : 6n-3 in the larvae of a marine teleost fish from Australian waters, the striped trumpeter (Latris lineata). Lipids, 39 (3). pp. 215-222.

Cobcroft, Jennifer M., Pankhurst, Patricia M., Poortenaar, Carolyn, Hickman, Bob, and Tait, Mike (2004) Jaw malformation in cultured yellowtail kingfish (Seriola lalandi) larvae. New Zealand Journal of Marine and Freshwater Research, 38 (1). pp. 67-71.

Zeng, Chaoshu, Li, Shaojing, and Zeng, Hui (2004) Occurrence of additional Zoea-VI larvae in the mud crab, Scylla paramamosain (Estampador), reared in the laboratory. Hydrobiologia, 529 (1-3). pp. 49-58.

Pit, Josiah H., and Southgate, Paul C. (2003) Should slow growing pearl oyster (Pinctada margaritifera) spat (Runts) be discarded? Journal of Shellfish Research, 22 (3). pp. 773-775.

Pit, Josiah H., and Southgate, Paul C. (2003) Fouling and predation; how do they affect growth and survival of the blacklip pearl oyster, Pinctada margaritifera, during nursery culture? Aquaculture International, 11 (6). pp. 545-555.

Doupe, Robert G., and Lymbery, Alan J. (2003) Toward the genetic improvement of feed conversion efficiency in fish. Journal of the World Aquaculture Society, 34 (3). pp. 245-254.

Doupe, R.G., Partridge, G.J., and Lymbery, A J (2003) Visible implant fluorescent elastomer tags as pedigree markers for applied aquaculture: an evaluation using black bream Acanthopagrus butcheri. Aquaculture Research, 34 (8). pp. 681-683.

McKinnon, A.D., Duggan, S., Nichols, P.D., Rimmer, M.A., Semmens, G., and Robino, B. (2003) The potential of tropical paracalanid copepods as live feeds in aquaculture. Aquaculture, 223 (1-4). pp. 89-106.

Doroudi, M.S., Southgate, P.C., and Lucas, J.S. (2003) Variation in clearance and ingestion rates by larvae of the black-lip pearl oyster (Pinctada margaritifera, L.) feeding on various microalgae. Aquaculture Nutrition, 9 (1). pp. 11-16.

Strugnell, Jan M., and Southgate, Paul C. (2003) Changes in tissue composition during larval development of the blacklip pearl oyster, Pinctada margaritifera (L.). Molluscan Research, 23 (2). pp. 179-183.

Lymbery, A.J., Doupe, R.G., and Pettit, N. E. (2003) Effects of salinisation on riparian plant communities in experimental catchments on the Collie River, Western Australia. Australian Journal of Botany, 51 (6). pp. 667-672.

Doupe, R.G., Lymbery, A.J., and Greeff, J. (2003) Genetic variation in the growth traits of straight-bred and crossbred black bream (Acanthopagrus butcheri Munro) at 90 days of age. Aquaculture Research, 34. pp. 1297-1301.

Starcevich, Mark R., Lymbery, Alan J., and Doupe, Robert G. (2003) Potential environmental impacts from farming rainbow trout using inland saline water in Western Australia. Australasian Journal of Environmental Management, 10 (1). pp. 15-24.

Owens, Leigh, McElnea, Catriona, Snape, Natale, Harris, Lachlan, and Smith, Malcolm (2003) Prevalence and effect of spawner-isolated mortality virus on the hatchery phases of Penaeus monodon and P. merguiensis in Australia. Diseases of Aquatic Organisms, 53 (2). pp. 101-106.

Doupe, Robert G., Lymbery, Alan J., and Starcevich, Mark R. (2003) Rethinking the land: the development of inland saline aquaculture in Western Australia. International Journal of Agricultural Sustainability, 1 (1). pp. 30-37.

Cobcroft, J.M., and Pankhurst, P.M. (2003) Sensory organ development in cultured striped trumpeter larvae Latris lineata: implications for feeding behaviour. Marine and Freshwater Research, 54 (5). pp. 669-682.

Austin, C.M., Nguyen, T.T.T., Meewan, M. M., and Jerry, D.R. (2003) The taxonomy and phylogeny of the 'Cherax destructor' complex (Decapoda: Parastacidae) examined using mitochondrial 16S sequences. Australian Journal of Zoology, 51 (2). pp. 99-110.

Steinberg, Peter D., de Nys, Rocky, and Kjelleberg, Staffan (2002) Chemical cues for surface colonization. Journal of Chemical Ecology, 28 (10). pp. 1935-1951.

Doroudi, Mehdi S., Southgate, Paul C., and Mayer, Robert J. (2002) Evaluation of partial substitution of live algae with dried Tetraselmis for larval rearing of black-lip pearl oyster, Pinctada margaritifera (L.). Aquaculture International, 10 (4). pp. 265-277.

Cullen, B.R., and Owens, L. (2002) Experimental challenge and clinical cases of Bohle iridovirus (BIV) in native Australian anurans. Diseases of Aquatic Organisms, 49 (2). pp. 83-92.

Tang, Kathy F.-J., Spann, Kirsten M., Owens, Leigh, and Lightner, Donald V. (2002) In situ detection of Australian gill-associated virus with a yellow head virus gene probe. Aquaculture, 205 (1-2). pp. 1-5.

Oxley, A.P.A., Shipton, W.A., Owens, L., and McKay, D. (2002) Bacterial flora from the gut of the wild and cultured banana prawn, Penaeus merguiensis. Journal of Applied Microbiology, 93 (2). pp. 214-223.

Jones, Clive M., and Ruscoe, Ian M. (2002) Biological and aquaculture characteristics of five stocks of redclaw, Cherax quadricarinatus (von Martens) (Decapoda: Parastacidae) from northern Queensland, Australia. Freshwater Crayfish, 13. pp. 115-135.

Steinberg, Peter D., and de Nys, Rocky (2002) Chemical mediation of colonization of seaweed surfaces. Journal of Phycology, 38 (4). pp. 621-629.

Roekring, Songsak, Nielsen, Linda, Owens, Leigh, Pattanakitsakul, Sa-nga, Malasit, Prida, and Flegel, T.W. (2002) Comparison of penaeid shrimp and insect parvoviruses suggests that viral transfers may occur between two distantly related arthropod groups. Virus Research, 87 (1). pp. 79-87.

Ruscoe, Ian M., Jones, Paul L., and Jones, Clive M. (2002) Effects of feeding moist and dry diets to redclaw crayfish Cherax quadricarinatus, in tanks. Freshwater Crayfish, 13. pp. 164-176.

Elliott, Nicholas G., Bartlett, Jason, Evans, Brad, and Sweijd, Neville A (2002) Identification of southern hemisphere abalone (Haliotis) species by PCR-RFLP analysis of mitochondrial DNA. Journal of Shellfish Research, 21 (1). pp. 219-226.

Bromage, E.S., and Owens, L. (2002) Infection of barramundi Lates calcarifer with Streptococcus iniae: effects of different routes of exposure. Diseases of Aquatic Organisms, 52 (3). pp. 199-205.

de Nys, Rocky, and Steinberg, Peter D. (2002) Linking marine biology and biotechnology. Current Opinion in Biotechnology, 13 (3). pp. 244-248.

Edgerton, Brett F., Evans, Louis H., Stephens, Frances J., and Overstreet, Robin M. (2002) Synopsis of freshwater crayfish diseases and commensal organisms. Aquaculture, 206 (1-2). pp. 57-135.

Oakey, H.J., Cullen, B.R., and Owens, L. (2002) The complete nucleotid sequence of the Vibrio harveyi bacteriophage VHML. Journal of Applied Microbiology, 93 (6). pp. 1089-1098.

Doroudi, Mehdi S., and Southgate, Paul C. (2002) The effect of chemical cues on settlement behaviour of blacklip pearl oyster (Pinctada margaritifera) larvae. Aquaculture, 209 (1-4). pp. 117-124.

Cimino, Elizabeth J., Owens, Leigh, Bromage, Erin, and Anderson, Trevor A. (2002) A newly developed ELISA showing the effect of environmental stress on levels of hsp86 in Cherax quadricarinatus and Penaeus monodon. Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology, 132 (3). pp. 591-598.

Jones, Clive M., and Ruscoe, Ian M. (2001) Assessment of five shelter types in the production of redclaw crayfish Cherax quadricarinatus (Decapoda: Parastacidae) under earthen pond conditions. Journal of the World Aquaculture Society, 32 (1). pp. 41-52.

Kesarcodi-Watson, A., Lucas, J.S., and Klumpp, D. (2001) Comparative feeding and physiological energetics of diploid and triploid Sydney rock oysters, Saccostrea commercialis. Aquaculture, 203 (1-2). pp. 177-193.

Kesarcodi-Watson, A., Lucas, J.S., and Klumpp, D. (2001) Comparative feeding and physiological energetics of diploid and triploid Sydney rock oysters, Saccostrea commercialis. II. Influences of food concentration and tissue energy distribution. Aquaculture, 203 (1-2). pp. 195-216.

Jones, C.M., Linton, L., Horton, D., and Bowman, W. (2001) Effect of density on growth and survival of ornate rock lobster, Panulirus ornatus (Fabricius, 1798), in a flow-through raceway system. Marine and Freshwater Research, 52 (8). pp. 1425-1429.

Cobcroft, J.M., Pankhurst, P.M., Sadler, J., and Hart, P.R. (2001) Jaw development and malformation in cultured striped trumpeter Latris lineata. Aquaculture, 199 (3-4). pp. 267-282.

Mendez, E, Smith, Alastair, Figuere-Garutti, M, Navarro, I, Planas, JV, and Gutierrez, J (2001) Receptors for insulin-like growth factor-I (IGF-I) predominate over insulin receptors in skeletal muscle throughout the life cycle of Brown Trout, Salmo trutta. General and Comparative Endocrinology , 122 (2). pp. 148-157.

Cobcroft, J.M., Pankhurst, P.M., Hart, P.R., and Battalene, S.C. (2001) The effects of light intensity and algae-induced turbidity on feeding behaviour of larval striped trumpeter. Journal of Fish Biology, 59 (5). pp. 1181-1197.

Roper, K.G., Owens, L., and West, L. (2001) The media used in primary cell cultures of prawn tissues: a review and a comparative study. Asian Fisheries Science, 14 (1). pp. 61-75.

Pit, J.H., and Southgate, P.C. (2000) When should pearl oyster, Pinctada margaritifera (L.), spat be transferred from the hatchery to the ocean? Aquaculture Research, 31 (10). pp. 773-778.

Jones, Clive M., and Ruscoe, Ian M. (2000) Assessment of stocking size and density in the production of redclaw crayfish, Cherax quadricarinatus (von Martens) (Decapoda: Parastacidae), cultured under earthen pond conditions. Aquaculture, 189 (1-2). pp. 63-71.

Doroudi, M.S., and Southgate, P.C. (2000) The influence of algal ration and larval density on growth and survival of blacklip pearl oyster Pinctada margaritifera (L.) larvae. Aquaculture Research, 31 (8-9). pp. 621-626.

Southgate, Paul C., and Beer, Andrew C. (2000) Growth of blacklip pearl oyster (Pinctada margaritifera) juveniles using different nursery culture techniques. Aquaculture, 187 (1-2). pp. 97-104.

Jones, C.M., McPhee, C.P., and Ruscoe, I.M. (2000) A review of genetic improvement in growth rate in redclaw crayfish Cherax quadricarinatus (von Martens) (Decapoda: Parastacidae). Aquaculture Research, 31 (1). pp. 61-67.

Beer, Andrew C., and Southgate, Paul C. (2000) Collection of pearl oyster (family Pteriidae) spat at Orpheus Island, Great Barrier Reef (Australia). Journal of Shellfish Research, 19 (2). pp. 821-826.

Friedman, Kim J., and Southgate, Paul C. (1999) Growout of blacklip pearl oysters, Pinctada margaritifera collected as wild spat in the Solomon Islands. Journal of Shellfish Research, 18 (1). pp. 159-167.

Yukihira, H., Klumpp, D.W., and Lucas, J.S. (1998) Comparative effects of microalgal species and food concentration on suspension feeding and energy budgets of the pearl oysters Pinctada margaritifera and P. maxima (Bivalvia: Pteriidae). Marine Ecology Progress Series, 171. pp. 71-84.

Geddes, Michael C., and Jones, Clive M. (1997) Australian freshwater crayfish exploitation by fishing and aquaculture. Australian Biologist, 10 (1). pp. 70-75.

McPhee, C.P., and Jones, C.M. (1997) Selection for weight gain in Redclaw crayfish. Proceedings of the Association for the Advancement of Animal Breeding and Genetics, 12. pp. 81-84.

Jones, Clive M. (1995) Production of juvenile redclaw crayfish, Cherax quadricarinatus (von Martens)(Decapoda, Parastacidae) III. managed pond production trials. Aquaculture, 138 (1-4). pp. 247-255.

Curtis, Millin C., and Jones, Clive M. (1995) Observations on monosex culture of redclaw crayfish Cherax quadricarinatus von Martens (Decapoda: Parastacidae) in earthen ponds. Journal of the World Aquaculture Society, 26 (2). pp. 154-159.

Jones, Clive M. (1995) Production of juvenile redclaw crayfish, Cherax quadricarinatus (von Martens)(Decapoda, Parastacidae) I. development of hatchery and nursery procedures. Aquaculture, 138 (1-4). pp. 221-238.

Jones, Clive M. (1995) Production of juvenile redclaw crayfish, Cherax quadricarinatus (von Martens)(Decapoda, Parastacidae) II. juvenile nutrition and habitat. Aquaculture, 138 (1-4). pp. 239-245.

Rimmer, M.A., Reed, A.W., Levitt, M.S., and Lisle, A.T. (1994) Effects of nutritional enhancement of live food organisms on growth and survival of barramundi, Lates calcarifer (Bloch), larvae. Aquaculture Research, 25 (2). pp. 143-156.

Rimmer, Michael A. (1993) Ectogenic meromixis in a brackish water pond in tropical northern Australia. Journal of Applied Aquaculture, 2 (1). pp. 125-130.

Rasheed, M.A., and Bull, C.M (1992) Behaviour of the western king prawn, Penaeus latisulcatus Kishinouye: effect of food dispersion and crowding. Australian Journal of Marine and Freshwater Research, 43 (4). pp. 745-752.

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Book Chapter

Zeng, Chaoshu, Lucas, John, and Southgate, Paul C. (2019) Freshwater decapod crustaceans. In: Lucas, John S., Southgate, Paul C., and Tucker, Craig S., (eds.) Aquaculture: farming aquatic animals and plants. John Wiley & Sons., Hoboken, NJ, USA, pp. 527-548.

Hutson, Kate S., and Cain, Kenneth D. (2019) Pathogens and Parasites. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, Hoboken, NJ, USA, pp. 217-246.

Heimann, Kirsten, and Huerlimann, Roger (2015) Microalgal classification: major classes and genera of commercial microalgal species. In: Kim, Se-Kwon, (ed.) Handbook of Marine Microalgae: Biotechnolgy Advances. Academic Press, London, UK, pp. 25-41.

Heimann, Kirsten, and Cirés, Samuel (2015) N2-fixing cyanobacteria: ecology and biotechnological applications. In: Kim, Se-Kwon, (ed.) Handbook of Marine Microalgae: Biotechnolgy Advances. Academic Press, London, UK, pp. 501-515.

De Jesus-Ayson, Evelyn Grace, Ayson, Felix G., and Thepot, Valentin (2014) Early development and seed production of Asian seabass, Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 16-30.

Hutson, Kate S. (2014) Infectious diseases of Asian seabass and health management. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 102-136.

Sharp, Michael, and Lopata, Andreas L. (2014) Muscle proteins in Asian seabass-Parvalbumin's role as a physiological protein and fish allergen. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 293-305.

Carton, Alexander G., and Jones, Ben (2014) Post-harvest quality in farmed Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 229-257.

Jerry, Dean R., and Smith-Keune, Carolyn (2014) The genetics of Asian seabass. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 137-177.

Nuez-Ortín, Waldo G. (2013) Natural growth promoters in aquaculture practices. In: Sieiro Piñeiro, Maria Pilar, Vazquez Ferreiro, Uxía, Estévez Calvar, Noelia, and Maroto Leal, Julio, (eds.) New Additives and Ingredients in the Formulation of Aquafeeds. Centro Tecnológico del Mar-Fundación, Pontevedra, Spain, pp. 9-26.

Ahmed, Faruq, Li, Yan, and Schenk, Peer M. (2012) Algal biorefinery: sustainable production of biofuels and aquaculture feed? In: Gordon, Richard, and Seckbach, Joseph, (eds.) The Science of Algal Fuels: phycology, geology, biophotonics, genomics and nanotechnology. Cellular Origin, Life in Extreme Habitats and Astrobiology, 25 . Springer, Dordrecht, the Netherlands, pp. 21-41.

Southgate, Paul C. (2012) Foods and feeding. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 188-213.

Appleford, Peter, Lucas, John S., and Southgate, Paul C. (2012) General principles. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 18-51.

Moorhead, Jonathan, and Knop, Daniel (2012) Ornamentals. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 583-605.

Zeng, Chaoshu, Cheng, Yongxu, Lucas, John S., and Southgate, Paul C. (2012) Other decapod crustaceans. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 514-540.

Southgate, Paul C., and Lucas, John S. (2012) Reproduction, life cycles and growth. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 126-137.

Barki, Assaf, Jones, Clive, and Karplus, Ilan (2011) Chemical communication and aquaculture of decapod crustaceans: needs, problems, and possible solutions. In: Breithaupt, Thomas, and Thiel, Martin, (eds.) Chemical Communication in Crustaceans. Springer, New York, USA, pp. 485-506.

Pickering, Timothy D., Ponia, Ben, Hair, Cathy A., Southgate, Paul C., Poloczanska, Elvira S., Della Patrona, Luc, Teitelbaum, Antoine, Mohan, Chadag V., Phillips, Michael J., Bell, Johann D., and De Silva, Sena (2011) Vulnerability of aquaculture in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 647-731.

de Nys, R., and Guenther, J. (2009) The impact and control of biofouling in marine finfish aquaculture. In: Hellio, Claire, and Yebra, Diego, (eds.) Advances in Marine Antifouling Coatings and Technologies. Woodhead Publishing, Cambridge,UK, pp. 177-221.

Jones, C.M. (2009) Advances in the culture of lobsters. In: Burnell, Gavin, and Allan, Geoff, (eds.) New Technologies in Aquaculture: improving production efficiency, quality and environmental management. Woodhead Publishing, Cambridge, UK, pp. 822-844.

Steicke, C.R., Jegatheesan, V., and Zeng, C. (2009) Recirculating aquaculture systems - a review. In: Vigneswaran, S., (ed.) Water and Wastewater Treatment Technologies. Encyclopedia of Life Support Systems , 1-2 . EOLSS, Oxford, UK, pp. 1-25.

de Nys, Rocky, and Ison, Odette (2008) Biofouling. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 527-553.

Southgate, Paul C., Strack, Elisabeth, Hart, Anthony, Wada, Katsuhiko T., Monteforte, Mario, Cariño , Micheline, Langy, Sandra, Lo, Cedrik, Acosta-Salmon, Hector, and Wang, Aimin (2008) Exploitation and culture of major commercial species. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 303-355.

Southgate, Paul C., Lucas, John S., and Torrey, Richard D. (2008) Future developments. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 555-565.

Pankhurst, Ned W. (2008) Gonadal steroids: functions and patterns of change. In: Rocha, Maria João, Arukwe, Augustine, and Kapoor, B.G., (eds.) Fish Reproduction. Science Publishers, Enfield, NH, USA, pp. 67-111.

Pankhurst, Patricia M. (2008) Mechanoreception. In: Finn, R.N., and Kapoor, B.G., (eds.) Fish Larval Physiology. Science Publishers, New Hampshire, USA, pp. 305-329.

Southgate, Paul C. (2008) Pearl oyster culture. In: Southgate, Paul C., and Lucas, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 231-272.

Gutierrez, J., Navarro, I., Planas, J.V., Monserrat, N., Rojas, P., Castillo, J., Chystiakova, O.V., Gabillard, J.C., Smith, A., Chan, S.J., and Leibush, N.B. (2006) Insulin and IGF receptors in fish. In: Reinecke, Manfred, Zaccone, Giacomo, and Kapoor, B.G., (eds.) Fish Endocrinology. Science Publishers, Enfield, New Hampshire, USA, pp. 131-163.

Owens, Leigh (2003) Diseases. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 199-214.

Southgate, Paul C. (2003) Feeds and feed production. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 172-198.

Appleford, Peter, Lucas, John S., and Southgate, Paul (2003) General principles. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 11-46.

Southgate, Paul C., and Lucas, John S. (2003) Reproduction, life cycles and growth. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: farming aquatic animals and plants. Blackwell Publishing, Oxford, UK, pp. 111-122.

O'Sullivan, David, Fielder, Don, and Jones, Clive (2003) Freshwater crustaceans. In: Lucas, John S., and Southgate, Paul C., (eds.) Aquaculture: Farming Aquatic Animals and Plants. Blackwell Publishing, Oxford, UK, pp. 420-442.

Lawrence, Craig, and Jones, Clive (2002) Cherax. In: Holdich, David M., (ed.) Biology of Freshwater Crayfish. Blackwell Science Ltd, Oxford UK, pp. 635-670.

Hair, Cathy, Bell, Johann, and Doherty, Peter (2002) The use of wild-caught juveniles in coastal aquaculture and its application to coral reef fishes. In: Stickney, Robert R., and McVey, James P., (eds.) Responsible Marine Aquaculture. CABI, Oxon, UK, pp. 327-353.

Jones, Clive (1998) Redclaw Crayfish. In: Hyde, K.W., (ed.) The New Rural Industries: A Handbook for Farmers and Investors. Rural Industries Research and​ Development Corporation, Canberra, ACT, Australia, pp. 127-133.

Curtis, Millin C., and Jones, Clive M. (1995) Overview of redclaw crayfish, Cherax quadricarinatus, farming practices in northern Australia. In: Geddes, Michael C., Fielder, Donald R., and Richardson, Alastair M.M., (eds.) Freshwater Crayfish X: Papers from the 10th International Symposium on Astacology. Louisiana State University, Baton Rouge, LA, USA, pp. 447-455.

Medley, Paul B., Jones, Clive M., and Avault, James W. (1995) A bibliography of the Australian redclaw crayfish, Cherax quadricarinatus (von Martens 1868) (Decapoda: Parastacidae). In: Geddes, Michael C., Fielder, Donald R., and Richardson, Alastair M.M., (eds.) Freshwater Crayfish X: Papers from the 10th International Symposium on Astacology. Louisiana State University, Baton Rouge, Louisiana, USA, pp. 532-549.

Barker, J.R., Crawford, C.M., Shelley, C.C., Braley, R.D., Lucas, J.S., Nash, W.J., and Lindsay, S. (1988) Ocean-nursery technology and production data for the giant clam Tridacna gigas. In: Copland, J.W., and Lucas, J.S., (eds.) Giant clams in Asia and the Pacific. ACIAR Monograph Series (9). Australian Centre for International Agricultural Research (ACIAR), Canberra, ACT, Australia, pp. 225-228.

Report

Jones, Clive, Huong, Le Lan, Tuan, Le Anh, Bahrawi, Samsul, and Irvin, Simon (2015) Spiny lobster aquaculture development in eastern Indonesia, Vietnam and Australia. Report. Australian Centre for International Agricultural Research (ACIAR), Canberra, ACT, Australia.

Zeng, Chaoshu, Thobejane, Tubake , and Nguyen, Thi Thu Thuy (2014) Improving feeds and feeding practices for the redclaw aquaculture industry. Report. Rural Industries Research and Development Corporation, Barton, ACT, Australia.

Jerry R., Dean, Smith-Keune, Carolyn, Hodgson, Lauren, Pirozzi, Igor, Carton, A. Guy, Hutson, Kate S., Brazenor, Alexander K., Trujillo Gonzalez, Alejandro, Gamble, Stephen, Collins, Geoff, and Vanderwal, Jeremy (2013) Vulnerability of an Iconic Australian Finfish (Barramundi - Lates calcarifer) and Aligned Industries to Climate Change across Tropical Australia. Report. Fisheries Research and Development Corporation, Douglas, QLD, Australia.

Graham, Peter, Nash, Warwick, Vira, Havini, and Zeng, Chaoshu (2012) Promising Indigenous Fish Species and Bioremediation for Barramundi Aquaculture in Northern Australia. Report. Australian Centre for International Agricultural Research (ACIAR), Canberrra, ACT.

Booth, Mark A., Pirozzi, Igor, Allan, Geoff L., and Fielder, D. Stewart (2010) Aquafin CRC Project 1B5: Feed Technology for Temperate f\Fish Species. Volume 2: Diet Development. Report. Industry and Investment NSW, NSW, Australia.

Heasman, Mike, Diggles, Ben K., Hurwood, David, Mather, Peter, Pirozzi, Igor, and Dworjanyn, Symon (2004) Paving the way for continued rapid development of the flat (angasi) oyster (Ostrea angasi) farming industry in New South Wales. Report. NSW Fisheries, Nelson Bay, NSW.

Conference Item

Marc, A., Guppy, J., Jerry, D., Mulvey, P., Bauer, P., and Paris, D. (2019) Evaluating barramundi (Lates calcarifer) sperm quality using high throughput advanced reproductive tools. In: [Abstracts from Aquaculture Europe]. From: Aquaculture Europe 19, 8-10 October 2019, Berlin, Germany.

Paris, Damien B.B.P. (2016) Fertility in adverse environments: correlating sperm quality with fertility in barramundi. In: Australian Barramundi Farmers Association Workshop. From: Australian Barramundi Farmers Association Workshop, 10-13 April 2016, Townsville, QLD, Australia. (Unpublished)

Jones, Clive M. (2015) Spiny lobster aquaculture development in Indonesia, Vietnam and Australia. In: ACIAR Proceedings (145) From: International Lobster Aquaculture Symposium, 22-25 April 2014, Lombok, Indonesia.

Heimann, Kirsten, and Huerlimann, Roger (2015) The benefits and advantages of commercial algal biomass harvesting. In: Proceedings of the Biosafety and the Environmental Uses of Micro-Organisms Conference. pp. 73-92. From: OECD Conference on the Environmental Uses of Micro-organisms, 26-27 March 2012, Paris, France.

Berner, Florian, Heimann, Kirsten, and Sheehan, Madoc (2015) A perfused membrane biofilm reactor for microalgae cultivation in tropical conditions. In: Proceedings of the 16th Asia Pacific Confederation of Chemical Engineering Congress (2015) 3133047. pp. 291-301. From: APCChE 2015: 16th Asia Pacific Confederation of Chemical Engineering Congress, 27 September - 1 October 2015, Melbourne, VIC, Australia.

Hair, Cathy A., Pickering, Timothy D., and Mills, David J. (2012) Asia-Pacific Tropical Sea Cucumber Aquaculture: proceedings of an International Symposium held in Noumea, New Caledonia, 15-17 February, 2011. In: ACIAR Proceedings (136) pp. 1-209. From: Asia–Pacific Tropical Sea Cucumber Aquaculture, 15-17 February 2011, Noumea, New Caledonia.

Steicke, C., Jegatheesan, V., and Zeng, C. (2009) Performance of a recirculating tank-based system utilizing floating and submerged filters with a denitrification column for the culture of barramundi (Lates calcarifer). In: Proceedings of the Fourth International Symposium on Southeast Asian Water Environment (4) pp. 253-260. From: Fourth International Symposium on Southeast Asian Water Environment, 6-8 December 2006, Bangkok, Thailand.

Foyle, Leo (2005) Fin fish farming: significant diseases and trends. In: Proceedings of the Fish Vaccine Training Meeting for Assessors of Competent Authorities of the European Economic Area. pp. 5-7. From: Proceedings of the Fish Vaccine Training Meeting for Assessors of Competent Authorities of the European Economic Area, 21-22 September 2005, Dublin, Ireland.

Zeng, Chaoshu, and Li, Shaojing (1999) Effects of density and different combinations of diets on survival, development, dry weight and chemical composition of larvae of the mud crab, Scylla paramamosain. In: Australian Centre for International Agricultural Research (ACIAR) Proceedings (78) pp. 159-166. From: Mud Crab Aquaculture and Biology, 21-24 April 1997, Darwin, NT, Australia.

Li, Shaojing, Zeng, Chaoshu, Tang, Hong, Wang, Guizhong, and Lin, Qiongwu (1999) Investigations into the reproductive and larval culture biology of the mud crab, Scylla paramamosain: a research overview. In: Australian Centre for International Agricultural Research (ACIAR) Proceedings. pp. 121-124. From: Mud Crab Aquaculture and Biology, 21-24 April 1997, Darwin, NT, Australia.

Jones, Clive M. (1995) Effect of temperature on growth and survival of the tropical freshwater crayfish, Cherax quadricarinatus (von Martens)(Decapoda, Parastacidae). In: Freshwater Crayfish VIII: Papers from the 8th International Symposium on Astacology. pp. 391-398. From: 8th International Symposium on Astacology, 22-26 April 1990, Baton Rouge, LA, USA.

Jones, Clive (1995) Evaluation of six diets fed to redclaw, Cherax quadricarinatus (von Martens), held in pond enclosures. In: Freshwater Crayfish X: Papers from the 10th International Symposium on Astacology. pp. 469-479. From: 10th International Symposium on Astaclogy, 10-15 April 194, Adelaide, SA, Australia.

Jones, Clive (1995) Salinity tolerance of the tropical freshwater crayfish, Cherax quadricarinatus (von Martens)(Decapoda, Parastacidae). In: Freshwater Crayfish VIII: Papers from the 8th International Symposium on Astacology. pp. 399-409. From: 8th International Symposium on Astacology, 22-26 April 1990, Baton Rouge, LA, USA.

Book

Jerry, Dean R. (2014) Biology and Culture of Asian Seabass Lates calcarifer. CRC Press, Boca Raton, FL, USA.

Lucas, John, and Southgate, Paul (2012) Aquaculture: farming aquatic animals and plants. Wiley-Blackwell, West Sussex, UK, pp. 1-648.

Southgate, Paul C., and Lucas, John S. (2008) The Pearl Oyster. Elsevier, Oxford, UK.

Jones, Clive M., and Grady, Jo-Anne (2000) Redclaw from harvest to market: a manual of handling procedures. Information Series, Q199083 . Department of Primary Industries Queensland, Brisbane, QLD, Australia.

Jones, Clive M., McPhee, Cam P., and Ruscoe, Ian M. (1998) Breeding redclaw: management and selection of broodstock. Queensland Information Series, Q198016 . Department of Primary Industries Queensland, Brisbane, QLD, Australia.

Jones, Clive (1990) The Biology and Aquaculture Potential of the Tropical Freshwater Crayfish, Cherax quadricarinatus. Queensland Information Series, QI90028 . Department of Primary Industries Queensland, Brisbane, QLD, Australia.

Thesis

Hair, Catherine Ann (2020) Development of community-based mariculture of sandfish, Holothuria scabra, in New Ireland Province, Papua New Guinea. PhD thesis, James Cook University.

Budd, Alyssa (2020) Epigenetic effects of temperature on sex change in barramundi, Lates calcarifer. PhD thesis, James Cook University.

Vaughan, David Brendan (2018) Cleaner shrimp as biocontrols in aquaculture. PhD thesis, James Cook University.

Sakuna, Kitikarn (2018) Novel RNA viruses causing muscle lesions in red claw crayfish (Cherax quadricarinatus). PhD thesis, James Cook University.

Noble, Tansyn Honi (2018) Selective breeding for tolerance to gill-associated virus in the black tiger shrimp, Penaeus monodon. PhD thesis, James Cook University.

Moorhead, Jonathan Allyn (2017) Broodstock management, development of rearing systems, and feeding regimes for larvae of the forktail blenny, Meiacanthus atrodorsalis. PhD thesis, James Cook University.

Nguyen Dinh Quang, Duy (2017) Developing hatchery culture of the tropical sea cucumber, Holothuria scabra, using micro-algae concentrates. PhD thesis, James Cook University.

Bastos Gomes, Giana (2017) Ecology and detection of harmful freshwater fish ciliate parasites Chilodonella spp. in aquaculture. PhD thesis, James Cook University.

Ram, Ravinesh (2017) Influence of processing techniques on quality and nutritional composition of the tropical sea cucumber Holothuria scabra. PhD thesis, James Cook University.

Malara, Danilo (2017) Photodynamic antimicrobial chemotherapy for pathogenic vibrio control in prawn hatcheries. PhD thesis, James Cook University.

Shao, Luchang (2016) Development of larval fish rearing techniques and nutrient requirements for the green mandarin, Synchiropus splendidus: a popular marine ornamental fish. PhD thesis, James Cook University.

Basiita, Rose Komugisha (2016) Genetic structure and biogeography of three commercially important African freshwater fishes: Lates niloticus, Bagrus docmak and Bagrus bayad. PhD thesis, James Cook University.

Lal, Monal M. (2016) Genetic structure, population connectivity and taxonomic identity of the black-lip pearl oyster Pinctada margaritifera (Bivalvia: Pteriidae), across its Indo-Pacific distribution. PhD thesis, James Cook University.

Dao, Hoc Tan (2016) Recruitment and genetic population genetics of spiny lobsters, Panulirus ornatus and P. homarus in the south-east Asian archipelago. PhD thesis, James Cook University.

Angell, Alex Raymond (2016) Seaweeds as an alternative crop for the production of protein. PhD thesis, James Cook University.

Berner, Florian (2015) Assessment & design of perfused microalgal biofilm cultivation processes. PhD thesis, James Cook University.

Trujillo González, Alejandro (2015) Behaviour, histopathology and immunobiology: interactions between the ectoparasite Neobenedenia (Monogenea: Capsalidae) and its host, Lates calcarifer (Perciformes: Latidae). Masters (Research) thesis, James Cook University.

Alajmi, Fahad F. (2015) Developing intensive culture techniques for the tropical copepod Parvocalanus crassirostris as a live feed for aquaculture. PhD thesis, James Cook University.

Genodepa, Jerome G. (2015) Digestive enzyme dynamics during early life stages of the mud crab, Scylla serrata and the spiny lobster, Panulirus ornatus. PhD thesis, James Cook University.

Thobejane, Tubake Refiloe (2015) Improvement of formulated feeds and feeding management for redclaw aquaculture in Australia. Masters (Research) thesis, James Cook University.

Kishore, Pranesh (2015) Improving the quality of cultured round pearls produced by Pinctada margaritifera in Fiji (Linnaeus, 1758). PhD thesis, James Cook University.

Lober, Malwine (2015) Investigation of the aquaculture potential of an Australian freshwater prawn, Macrobrachium spinipes (Schenkel, 1902), with emphasis on spawning induction, larval and nursery culture. Masters (Research) thesis, James Cook University.

von Alvensleben, Nicolas (2015) Microalgal species prospecting and characterisation for salinity tolerance, nutrient remediation and bio-product potential. PhD thesis, James Cook University.

Gosch, Björn Jürgen (2015) Oil content and quality in tropical seaweeds. PhD thesis, James Cook University.

Athauda, A.R. Saman Bandara (2014) Effect of culture environmental conditions on sex inversion of Asian seabass (barramundi), Lates calcarifer (Bloch). PhD thesis, James Cook University.

Ngo, Diu Thi (2014) Evaluation of canola meal as an aquafeed ingredient for barramundi (Asian seabass; Lates calcarifer). Masters (Research) thesis, James Cook University.

Domingos, Jose A.S. (2014) Filling in the gaps impeding the instigation of selective breeding programs in barramundi Lates calcarifer: fate of genetic diversity through to harvest, estimation of genetic parameters and early prediction of family growth based on cellular processes. PhD thesis, James Cook University.

Jones, David Byron (2013) Genomic resources and genetic dissection of complex quantitative traits in the silver-lipped pearl oyster, Pinctada maxima. PhD thesis, James Cook University.

Wu, Xugan (2013) Lipid nutrition of early life history of two commercially important tropical crustaceans, the blue swimmer crab (Portunus pelagicus) and the ornate rock lobster (Panulirus ornatus), with emphasis on highly unsaturated fatty acids. PhD thesis, James Cook University.

Castine, Sarah (2013) Nitrogen removal and reuse in land-based aquaculture. PhD thesis, James Cook University.

Rusaini (2013) Suppression subtractive hybridization to investigate viruses in the lymphoid organ of Penaeus merguiensis and the gills of Cherax quadricarinatus. PhD thesis, James Cook University.

de Paula Silva, Pedro Henrique (2012) Green tide algae integrated aquaculture for nitrogen bioremediation. PhD thesis, James Cook University.

Cano-Gómez, Ana (2012) Molecular identification of Vibrio harveyi-related bacteria and Vibrio owensii sp. nov., pathogenic to larvae of the ornate spiny lobster Panulirus ornatus. PhD thesis, James Cook University.

Carl, Christina (2012) Surface-based technologies and the settlement of Mytilus galloprovincialis. PhD thesis, James Cook University.

Camus, Thomas (2012) The improvement of copepods intensive culture protocols as live feeds for aquaculture hatcheries. PhD thesis, James Cook University.

Tziouveli, Vasiliki (2011) Broodstock conditioning and larval rearing of the marine ornamental white-striped cleaner shrimp, Lysmata amboinensis (de Man, 1888). PhD thesis, James Cook University.

Kvingedal, Renate (2011) Environment, genes and the effects of genotype by environment (G x E) interactions, on the expression of commercially important traits in the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.

McGinty, Erin Louise (2011) Genetic contribution to pearl formation. PhD thesis, James Cook University.

Ballagh, Debra Anne (2011) Intensive rearing techniques and feeding behaviour of larval and juvenile mulloway, Argyrosomus japonicus. PhD thesis, James Cook University.

De Santis, Christian (2011) Regulation of growth: understanding the myostatin functioning in two important aquaculture species, barramundi (Lates calcarifer) and black tiger shrimp (Penaeus monodon). PhD thesis, James Cook University.

Milione, Michael (2011) Reproduction and growth of the winged pearl oyster, Pteria penguin (Röding, 1798) in the Great Barrier Reef lagoon. PhD thesis, James Cook University.

Mat Noordin, Noordiyana (2011) Towards development of a formulated diet for blue swimmer crab, Portunus pelagicus with emphasis on lipid nutrition. PhD thesis, James Cook University.

Sabetian, Armagan (2010) Parrotfish fisheries and population dynamics: a case-study from Solomon Islands. PhD thesis, James Cook University.

Lee, Anne Michelle (2010) Spatio-temporal factors affecting the growth of cultured silver-lip pearl oyster, Pinctada maxima (Jameson) (Mollusca: Pteriidae) in West Papua, Indonesia. PhD thesis, James Cook University.

Craven, Andrea (2010) A life submerged in sound: determining if aquaculture sounds induce stress in fish. Masters (Research) thesis, James Cook University.

Claydon, Kerry (2009) Advances in crustacean cell culture. PhD thesis, James Cook University.

Mamangkey, Noldy (2009) Improving the quality of pearls from Pinctada maxima. PhD thesis, James Cook University.

Lind, Curtis E. (2009) Population genetics, phylogeography and the effects of aquaculture on genetic diversity of the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.

Pirozzi, Igor (2009) A factorial approach to defining the dietary protein and energy requirements of mulloway, Argyrosomus japonicus : optimising feed formulations and feeding strategies. PhD thesis, James Cook University.

Elliott, Elisabeth (2008) Role of shock protein 70 (hsp70), ubiquitin and gill-associated virus in loss of production on prawn farms. PhD thesis, James Cook University.

Holme, May-Helen (2008) Towards development of a formulated diet for mud crab (Scylla serrata) larvae, with emphasis on lipid nutrition. PhD thesis, James Cook University.

Louden, Daniel James (2006) Bath sponge aquaculture: aspects of culture and quality. Masters (Research) thesis, James Cook University.

Munro, James Leslie (2006) The epidemiology of gill-associated virus in Penaeus monodon and the development of alternative detection methods. PhD thesis, James Cook University.

Rusaini, (2006) The lymphoid organ in penaeids and it's interaction with moulting. Masters (Research) thesis, James Cook University.

Herbert, Brett (2005) Feeding and growth of golden perch (Macquaria ambigua), and assessment of its potential for aquaculture. PhD thesis, James Cook University.

Horne, Michael Gary (2005) Investigation into development and preparation of 'artificial' food particles for tropical rock lobster, Panulirus ornatus, phyllosoma. Masters (Research) thesis, James Cook University.

Nankervis, Leo (2005) Quantitative and qualitative aspects of the protein nutrition of barramundi (Lates calcarifer) larvae fed formulated foods. PhD thesis, James Cook University.

Acosta-Salmon, Hector (2004) Broodstock management and egg quality of the pearl oysters Pinctada margaritifera and Pinctada fucata. PhD thesis, James Cook University.

Genodepa, Jerome (2004) Development of a formulated diet for mud crab, Scylla sewata, larvae. Masters (Research) thesis, James Cook University.

Pit, Josiah Henk (2004) Feasibility of Akoya pearl oyster culture in Queensland. PhD thesis, James Cook University.

Badger, Amanda Catherine (2004) The effects of nutrition on reproduction in the Eastern Rainbowfish, Melanotaenia splendida splendida. Masters (Research) thesis, James Cook University.

Littik, Semuel Ayub Mathias (2003) Quantitative histopathology and epidemiology of prawn viral diseases. PhD thesis, James Cook University.

Gamage, Kumudu Radampola (2001) The effect of nutrition on reproductive parameters in male barramundi, Lates calcarifer (Bloch). PhD thesis, James Cook University.

Chang, Marshall C. (2000) Improvement of culture techniques for the seahorse Hippocampus sp. Masters (Research) thesis, James Cook University.

Taylor, Joseph James Uel (1999) Juvenile production and culture of the silver-lip pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.

Rimmer, Michael Albert (1996) Factors affecting survival and growth of larval barramaundi Lates calcarifer (Bloch) in aquaculture, with particular reference to feeding and extensive rearing. PhD thesis, James Cook University of North Queensland.

Cowden, Kenneth Lawrence (1995) Induced spawning and culture of yellowfin bream, Acanthopagrus australis (Günther, 1859) and mangrove jack, Lutjanus argentimaculatus (Forsskål, 1775). PhD thesis, James Cook University.

Smith, Ross Edward William (1987) The ecology of Australatya striolata (McCulloch and McNeill) (Decapoda: Atyidae). PhD thesis, James Cook University.