Publications by: Biomedical Sciences & Molecular Biology

Up a level
Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0 [feed] RSS 2.0
Group by: No Grouping | Creators | Item Type
Jump to: A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | V | W | Z
Number of items: 129.

A

Aslam, Hajara, Lotfaliany, Mojtaba, So, Daniel, Berding, Kirsten, Berk, Michael, Rocks, Tetyana, Hockey, Meghan, Jacka, Felice N., Marx, Wolfgang, Cryan, John F., and Staudacher, Heidi M (2024) Fiber intake and fiber intervention in depression and anxiety: a systematic review and meta-analysis of observational studies and randomized controlled trials. Nutrition Reviews, 82 (12). pp. 1678-1695.

Athukorala, Ajani, Lacasse, Claude, Curtiss, Jeffrey B., Phalen, David N., and Sarker, Subir (2023) Characterisation of a novel aviadenovirus associated with disease in tawny frogmouths (Podargus strigoides). Virology, 588. 109904.

Alharbi, Adel B., Schmitz, Ulf, Bailey, Charles G., and Rasko, John E.J. (2021) CTCF as a regulator of alternative splicing: new tricks for an old player. Nucleic Acids Research, 49 (14). pp. 7825-7838.

Amminger, G. Paul, Lin, Ashleigh, Kerr, Melissa, Weller, Amber, Spark, Jessica, Pugh, Charlotte, O'Callaghan, Sally, Berger, Maximus, Clark, Scott R., Scott, James G., Baker, Andrea, McGregor, Iain, Cotter, David, Sarnyai, Zoltan, Thompson, Andrew, Yung, Alison R., O'Donoghue, Brian, Killackey, Eoin, Mihalopoulos, Cathy, Yuen, Hok Pan, Nelson, Barnaby, and Mcgorry, Patrick D. (2021) Cannabidiol for at risk for psychosis youth: a randomized controlled trial. Early Intervention in Psychiatry, 16 (4). pp. 419-432.

Aghajani, Marra Jai, Yang, Tao, Schmitz, Ulf, James, Alexander, McCafferty, Charles Eugenio, de Souza, Paul, Niles, Navin, and Roberts, Tara L. (2020) Epithelial-to-mesenchymal transition and its association with PD-L1 and CD8 in thyroid cancer. Endocrine Connections, 9. pp. 1028-1041.

Amirkhah, Raheleh, Naderi-Meshkin, Hojjat, Shah, Jaynish S., Dunne, Philip D., and Schmitz, Ulf (2019) The intricate interplay between epigenetic events, alternative splicing and noncoding RNA deregulation in colorectal cancer. Cells, 8 (8). 929.

Amirkhah, Raheleh, Meshkin, Hojjat Naderi, Farazmand, Ali, Rasko, John E.J., and Schmitz, Ulf (2017) Computational and experimental identification of tissue-specific MicroRNA targets. In: Dalmay, Tamas, (ed.) MicroRNA Detection and Target Identification: methods and protocols. Methods in Molecular Biology, 1580 . Humana Press Inc., New York, NY, USA, pp. 127-147.

Amirkhah, Raheleh, Schmitz, Ulf, Linnebacher, Michael, Wolkenhauer, Olaf, and Farazmand, Ali (2015) MicroRNA-mRNA interactions in colorectal cancer and their role in tumor progression. Genes, Chromosomes and Cancer, 54 (3). pp. 129-141.

Amirkhah, Raheleh, Farazmand, Ali, Gupta, Shailendra K., Ahmadi, Hamed, Wolkenhauer, Olaf, and Schmitz, Ulf (2015) Naïve Bayes classifier predicts functional microRNA target interactions in colorectal cancer. Molecular BioSystems, 11. pp. 2126-2134.

Amirkhah, R., Farazmand, A., Irfan-Maqsood, M., Wolkenhauer, O., and Schmitz, U. (2015) The role of microRNAs in the resistance to colorectal cancer treatments. Cellular and Molecular Biology, 61 (6). pp. 17-23.

B

Bhuiyan, Md Safiul Alam, Gupta, Suman Das, Silip, Juplikely James, Talukder, Saranika, Haque, Md Hakimul, Forwood, Jade K., and Sarker, Subir (2025) Current trends and future potential in the detection of avian coronaviruses: An emphasis on sensors-based technologies. Virology, 604. 110399.

Brennan, Sonja, Rudd, Donna, Watson, David, and Kandasamy, Yogavijayan (2024) The Relationship between maternal health during pregnancy and infant kidney development: A prospective cohort study. Journal of Nephrology, 37. 10.1007/s40620-024-02141-0. pp. 2531-2539.

Browne, Daniel J., Miller, Catherine M., and Doolan, Denise L. (2024) Technical pitfalls when collecting, cryopreserving, thawing, and stimulating human T-cells. Frontiers in Immunology, 15. 1382192.

Brennan, Sonja, Watson, David L., Rudd, Donna M., and Kandasamy, Yogavijayan (2023) Kidney growth following preterm birth: evaluation with renal parenchyma ultrasonography. Pediatric Research, 93. pp. 1302-1306.

Brennan, Sonja, Watson, David, Schneider, Michal, Rudd, Donna, and Kandasamy, Yogavijayan (2022) Fetal renal artery blood flow – Normal ranges. Ultrasound, 30 (1). pp. 62-71.

Blazev, Ronnie, Ashwood, Christopher, Abrahams, Jodie L., Chung, Long H., Francis, Deanne, Yang, Pengyi, Watt, Kevin I., Qian, Hongwei, Quaife-Ryan, Gregory A., Hudson, James E., Gregorevic, Paul, Thaysen-Andersen, Morten, and Parker, Benjamin L. (2021) Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development. Molecular and Cellular Proteomics, 20. 100030.

Bailey, Charles G., Gupta, Shailendra, Metierre, Cynthia, Amarasekera, Punkaja M.S., O'Young, Patrick, Kyaw, Wunna, Laletin, Tatyana, Francis, Habib, Semaan, Crystal, Sharifi Tabar, Mehdi, Singh, Krishna P., Mullighan, Charles G., Wolkenhauer, Olaf, Schmitz, Ulf, and Rasko, John (2021) Structure–function relationships explain CTCF zinc finger mutation phenotypes in cancer. Cellular and Molecular Life Sciences, 78. pp. 7519-7536.

Bangaru, Sandhya, Lang, Shanshan, Schotsaert, Michael, Vanderven, Hillary A., Zhu, Xueyong, Kose, Nurgun, Bombardi, Robin, Finn, Jessica A., Kent, Stephen J., Gilchuk, Pavlo, Gilchuk, Iuliia, Turner, Hannah L., García-Sastre, Adolfo, Li, Sheng, Ward, Andrew B., Wilson, Ian A., and Crowe, James E. (2019) A site of vulnerability on the influenza virus hemagglutinin head domain trimer interface. Cell, 177 (5). e.18. pp. 1136-1152.

Banks, D.J.D., Copeman, D.B., Skerratt, L.F., and Molina, E.C. (2006) Echinococcus granulosus in northern Queensland 1. Prevalence in cattle. Australian Veterinary Journal, 84 (9). pp. 303-307.

C

Casazza, Joseph P., Hofstetter, Amelia R., Costner, Pamela J.M., Holman, LaSonji A., Hendel, Cynthia S., Widge, Alicia T., Wu, Richard L., Whalen, William R., Cunningham, Jennifer, Arthur, Anita, Wang, Xiaolin, Ola, Abidemi, Saunders, Jamie, Mendoza, Floreliz, Novik, Laura, Burgos Florez, Maria C., Ortega-Villa, Ana M., Apte, Preeti J., Strom, Larisa, Wang, Lu, Imam, Marjaan, Basappa, Manjula, Naisan, Mursal, Castro, Mike, Trost, Jessica F., Narpala, Sandeep R., Vanderven, Hillary A., Yamshchikov, Galina V., Berkowitz, Nina M., Gordon, Ingelise J., Plummer, Sarah H., Wycuff, Diane L., Vazquez, Sandra, Gillespie, Rebecca A., Creanga, Adrian, Adams, William C., Carlton, Kevin, Gall, Jason G., McDermott, Adrian B., Serebryannyy, Leonid A., Houser, Katherine V., Koup, Richard A., Graham, Barney S., Ledgerwood, Julie E., Mascola, John R., Pierson, Theodore C., Andrews, Sarah F., Kanekiyo, Masaru, Dropulic, Lesia K., and The VRC 323 study team (2024) Phase 1 dose-escalation trial evaluating a group 2 influenza hemagglutinin stabilized stem nanoparticle vaccine. NPJ Vaccines, 9. 171.

Chin, Tak Gun Jeremy, Ruethers, Thimo, Chan, Bing Aleo, Lopata, Andreas Ludwig, and Du, Juan (2024) Techno-functional properties and allergenicity of mung bean (Vigna radiata) protein isolates from Imara and KPS2 varieties. Food Chemistry, 457. 140069.

Chartrand, K.M., Fletcher-Leonhardt, J.D., and Rasheed, M.A. (2020) Green Island Jetty Repairs Coral Monitoring Report – December 2020. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Cui, Cheng, Chatterjee, Bishwanath, Lozito, Thomas P., Zhang, Zhen, Francis, Richard J., Yagi, Hisato, Swanhart, Lisa M., Sanker, Subramaniam, Francis, Deanne, Yu, Qing, San Agustin, Jovenal T., Puligilla, Chandrakala, Chatterjee, Tania, Tansey, Terry, Liu, Xiaoqin, Kelley, Matthew W., Spiliotis, Elias T., Kwiatkowski, Adam V., Tuan, Rocky, Pazour, Gregory J., Hukriede, Neil A., and Lo, Cecilia W. (2013) Wdpcp, a PCP Protein Required for Ciliogenesis, Regulates Directional Cell Migration and Cell Polarity by Direct Modulation of the Actin Cytoskeleton. PLoS Biology, 11. e1001720.

Cui, Cheng, Chatterjee, Bishwanath, Francis, Deanne, Yu, Qing, SanAgustin, Jovenal T., Francis, Richard, Tansey, Terry, Henry, Charisse, Wang, Baolin, Lemley, Bethan, Pazour, Gregory J., and Lo, Cecilia W. (2011) Disruption of Mks1 localization to the mother centriole causes cilia defects and developmental malformations in Meckel-Gruber syndrome. Disease Models & Mechanisms, 4. pp. 43-56.

D

Diggins, Rebecca L., Grimm, Jessica, Mendez, Diana, Jones, Karina, Hamann, Mark, Bell, Ian, and Ariel, Ellen (2023) Confirmed feasibility of a satellite tracker attachment method on small juvenile hawksbill turtles Eretmochelys imbricata. Marine Ecology Progress Series, 704. pp. 119-130.

Du Plessis, Cole, Ganswindt, Andre, Joone, Carolynne, Pageat, Patrick, Paris, Damien B.B.P., Paris, Monique, and Riddell, Pia (2022) Improving social cohesion and survival of translocated African wild dogs using appeasing pheromones – Could the solution be right under our nose? In: [Presented at African Wild Dogs United 2022]. From: African Wild Dogs United 2022, 14-18 February 2022, Virtual.

Diggins, R., Burrie, R., Ariel, E., Ridley, J., Olsen, J., Schultz, S., Pettett-Willmett, G., Hemming, G., and Lloyd, J. (2022) A review of welfare indicators for sea turtles undergoing rehabilitation, with emphasis on environmental enrichment. Animal Welfare, 31 (2). pp. 219-230.

Dewdney, Brittany, Alanzay, Mohammed, Gillman, Rhys, Walker, Sarah, Wankell, Miriam, Qiao, Liang, George, Jacob, Roberts, Alex, and Hebbard, Lionel (2020) The effects of fructose and metabolic inhibition on hepatocellular carcinoma. Scientific Reports, 10. 16769.

Dewdney, Brittany, Roberts, Alexandra, Qiao, Liang, George, Jacob, and Hebbard, Lionel (2020) A sweet connection? Fructose’s role in hepatocellular carcinoma. Biomolecules, 10 (4). 496.

E

Emran, Abdullah Al, Nsengimana, Jérémie, Punnia-Moorthy, Gaya, Schmitz, Ulf, Gallagher, Stuart J., Newton-Bishop, Julia, Tiffen, Jessamy C., and Hersey, Peter (2020) Study of the female sex survival advantage in melanoma—a focus on x-linked epigenetic regulators and immune responses in two cohorts. Cancers, 12. 2082.

Edwards, Christopher R., Ritchie, William, Wong, Justin J-L., Schmitz, Ulf, Middleton, Robert, An, Xiuli, Mohandas, Narla, Rasko, John E.J., and Blobel, Gerd A. (2016) A dynamic intron retention program in the mammalian megakaryocyte and erythrocyte lineages. Blood, 127 (17). e24-e34.

Eales, Katie, Ketheesan, Natkunam, and Norton, Robert (2011) Problems with the use of a lateral flow assay in the serodiagnosis of brucellosis. Pathology, 43 (7). pp. 755-757.

Esmaili, S., George, J., and Hebbard, L. (2011) The role of adiponectin in NAFLD progression. Journal of Gastroenterology and Hepatology, 26 (s4). p. 9.

F

Finlay, Sabine, Adegboye, Oyelola, McDermott, Brett, Rudd, Donna, and Sarnyai, Zoltan (2025) Linking childhood allostatic load, early adversity and the emergence of mental health symptoms in early adulthood: Analysis of the ALSPAC longitudinal birth cohort. Psychoneuroendocrinology, 172. 107276.

Foyle, Leo, Burnett, Matthew, Creaser, Abbey, Hens, Rachel, Keough, Julia, Madin, Lauren, Price, Ruby, Smith, Hayley, Stone, Samuel, and Kinobe, Robert T. (2023) Prevalence and distribution of antimicrobial resistance in effluent wastewater from animal slaughter facilities: A systematic review. Environmental Pollution, 318. 120848.

Foster, J'Belle, Marais, Ben, Martin, Rotona L., Peniyamina, Dunstan, Mendez, Diana, Warner, Jeffrey, and McBryde, Emma (2021) Tuberculosis in the Torres Strait: the lady doth test too much. Rural and Remote Health, 21 (1). 6317.

Francis, Deanne, Krycer, James R, Cooney, Gregory J, and James, David E (2019) A modified gas-trapping method for high-throughput metabolic experiments in Drosophila melanogaster. BioTechniques, 67. pp. 123-125.

G

Gillman, Rhys, Schmitz, Ulf, Field, Matt A., and Hebbard, Lionel (2025) TARGET-SL: precision essential gene prediction using driver prioritisation and synthetic lethality. Briefings in Bioinformatics, 26 (3). bbaf255.

Green, Jessica Emily, Berk, Michael, Mohebbi, Mohammadreza, Loughman, Amy, McGuinness, Amelia J., Castle, David, Chatterton, Mary Lou, Perez, Joahna, Strandwitz, Philip, Athan, Eugene, Hair, Christopher, Nierenberg, Andrew A., Cryan, John F., and Jacka, Felice (2023) Feasibility, Acceptability, and Safety of Faecal Microbiota Transplantation in the Treatment of Major Depressive Disorder: A Pilot Randomized Controlled Trial. Canadian Journal of Psychiatry, 68 (5). pp. 315-326.

Green, Jessica E., McGuinness, Amelia J., Berk, Michael, Castle, David, Athan, Eugene, Hair, Christopher, Strandwitz, Philip, Loughman, Amy, Nierenberg, Andrew A., Cryan, John F., Mohebbi, Mohammadreza, and Jacka, Felice (2023) Safety and feasibility of faecal microbiota transplant for major depressive disorder: study protocol for a pilot randomised controlled trial. Pilot and Feasibility Studies, 9. 5.

Ganswindt, Andre, Joone, Carolynne, Pageat, Patrick, Paris, Damien, Paris, Monique, Riddell, Pia, and du Plessis, Cole (2022) Appeasing pheromones to improve social cohesion and survival of translocated African wild dogs. In: [Presented at the Department of Zoology and Entomology Seminar Series of the University of Pretoria]. From: Department of Zoology and Entomology Seminar Series of the University of Pretoria, 10 June 2022, Pretoria, South Africa.

Green, Jessica E., Berk, Michael, Loughman, Amy, Marx, Wolfgang, Castle, David, McGuinness, Amelia J., Cryan, John F., Nierenberg, Andrew A., Athan, Eugene, Hair, Christopher, and Jacka, Felice (2021) FMT for psychiatric disorders: following the brown brick road into the future. Bipolar Disorders, 23 (7). pp. 651-655.

González-Paredes, Daniel, Ariel, Ellen, David, Maria Florencia, Ferrando, Virginia, Marsh, Helene, and Hamann, Mark (2021) Gastrointestinal transit times in juvenile green turtles: an approach for assessing digestive motility disorders. Journal of Experimental Marine Biology and Ecology, 544. 151616.

Green, Jessica Emily, Davis, Jessica A., Berk, Michael, Hair, Christopher, Loughman, Amy, Castle, David, Athan, Eugene, Nierenberg, Andrew A., Cryan, John F., Jacka, Felice, and Marx, Wolfgang (2020) Efficacy and safety of fecal microbiota transplantation for the treatment of diseases other than Clostridium difficile infection: a systematic review and meta-analysis. Gut Microbes, 12 (1). 1854640.

Gillman, Rhys, and Hebbard, Lionel (2020) Independent regulation of tumorigenesis and fibrosis in non-alcoholic fatty liver disease. HepatoBiliary Surgery and Nutrition, 9 (1). pp. 106-108.

Green, Immanuel D., Pinello, Natalia, Song, Renhua, Lee, Quitin, Halsted, James M., Kwok, Chau-To, Wong, Alex C. H., Nair, Shalima S., Clark, Susan J., Roediger, Ben, Schmitz, Ulf, Larance, Mark, Hayashi, Rippei, Rasko, John E. J., and Wong, Justin J.-L. (2020) Macrophage development and activation involve coordinated intron retention in key inflammatory regulators. Nucleic Acids Research, 48 (12). pp. 6513-6529.

Gupta, Sunil, Read, Scott A., Shackel, Nicholas A., Hebbard, Lionel, George, Jacob, and Ahlenstiel, Golo (2019) The role of micronutrients in the infection and subsequent response to hepatitis C virus. Cells, 8 (6). 603.

Grech, A., Bos, M., Brodie, J., Coles, R., Dale, A., Gilbert, R., Hamann, M., Marsh, H., Neil, K., Pressey, R.L., Rasheed, M.A., Sheaves, M., and Smith, A. (2013) Guiding principles for the improved governance of port and shipping impacts in the Great Barrier Reef. Marine Pollution Bulletin, 75 (1). pp. 8-20.

Gutierrez, J., Navarro, I., Planas, J.V., Monserrat, N., Rojas, P., Castillo, J., Chystiakova, O.V., Gabillard, J.C., Smith, A., Chan, S.J., and Leibush, N.B. (2006) Insulin and IGF receptors in fish. In: Reinecke, Manfred, Zaccone, Giacomo, and Kapoor, B.G., (eds.) Fish Endocrinology. Science Publishers, Enfield, New Hampshire, USA, pp. 131-163.

H

Hong, Yaoqin, Qin, Jilong, Doyle, Matthew Thomas, and Reeves, Richard (2025) Sequestration of dead-end undecaprenyl phosphate-linked oligosaccharide intermediate. Microbiology, 171 (1). 001530.

Havula, E., Ghazanfar, S., Lamichane, N., Francis, D., Hasygar, K., Liu, Y., Alton, L.A., Johnstone, J., Needham, E.J., Pulpitel, T., Clark, T., Niranjan, H.N., Shang, V., Tong, V., Jiwnani, N., Audia, G., Alves, A.N., Sylow, L., Mirth, C., Neely, G.G., Yang, J., Hietakangas, V., Simpson, S.J., and Senior, A.M. (2022) Genetic variation of macronutrient tolerance in Drosophila melanogaster. Nature Communications, 13. 1637.

Hollander, Jonathan A., Cory-Slechta, Deborah A., Jacka, Felice N., Szabo, Steven T., Guilarte, Tomás R., Bilbo, Staci D., Mattingly, Carolyn J., Moy, Sheryl S., Haroon, Ebrahim, Hornig, Mady, Levin, Edward D., Pletnikov, Mikhail V., Zehr, Julia L., McAllister, Kimberly A., Dzierlenga, Anika L., Garton, Amanda E., Lawler, Cindy P., and Ladd-Acosta, Christine (2020) Beyond the looking glass: recent advances in understanding the impact of environmental exposures on neuropsychiatric disease. Neuropsychopharmacology, 45 (7). pp. 1086-1096.

Hokke, Stacey, de Zoysa, Natasha, Carr, Bethany L., Abruzzo, Veronica, Coombs, Peter R., Allan, Carolyn A., East, Christine, Ingelfinger, Julie R., Puelles, Victor P., Black, Mary J., Ryan, Danica, Armitage, James A., Wallace, Euan M., Bertram, John F., and Cullen‐McEwen, Luise A. (2019) Normal foetal kidney volume in offspring of women treated for gestational diabetes. Endocrinology, Diabetes & Metabolism, 2 (4). e00091. pp. 1-9.

Hernandez-Agreda, Alejandra, Leggat, William, Bongaerts, Pim, Herrera, Cesar, and Ainsworth, Tracy D. (2018) Rethinking the coral microbiome: simplicity exists within a diverse microbial biosphere. mBio, 9 (5).

Han, Shuanglin, Latchoumanin, Olivier, Wu, Guang, Zhou, Gang, Hebbard, Lionel, George, Jacob, and Qiao, Liang (2017) Recent clinical trials utilizing chimeric antigen receptor T cells therapies against solid tumors. Cancer Letters, 390. pp. 188-200.

Huo, Xiaoqi, Han, Shuanglin, Wu, Guang, Latchoumanin, Oliveir, Zhou, Gang, Hebbard, Lionel, George, Jacob, and Qiao, Liang (2017) Dysregulated long noncoding RNAs(lncRNAs) in hepatocellular carcinoma: implications for tumorigenesis, disease progression, and liver cancer stem cells. Molecular Cancer, 16. 165.

Heebøll, Sara, Thomsen, Karen Louise, Clouston, Andrew, Sundelin, Elias Immanuel, Radko, Yulia, Christensen, Lars Porskjær, Ramezani-Moghadam, Mehdi, Kreutzfeldt, Martin, Pedersen, Steen Bønløkke, Jessen, Niels, Hebbard, Lionel, George, Jacob, and Grønbæk, Henning (2015) Effect of resveratrol on experimental non-alcoholic steatohepatitis. Pharmacological research, 95-96. pp. 34-41.

I

Ingle, Danielle J., Walsh, Calum J., Samuel, Genevieve R., Wick, Ryan R., Davidovich, Nadav, Fiocchi, Eleonora, Judd, Louise M., Elliman, Jennifer, Owens, Leigh, Stinear, Timothy P., Basso, Andrea, Pretto, Tobia, and Newton, Hayley J. (2025) The complete genome sequence of the crayfish pathogen Candidatus Paracoxiella cheracis n.g. n.sp. provides insight into pathogenesis and the phylogeny of the Coxiellaceae family. mSphere, 10 (4). e01002-24.

J

Jordan, Margaret A., Gresle, Melissa M., Gemiarto, Adrian T., Stanley, Dragana, Smith, Letitia D., Laverick, Louise, Spelman, Tim, Stankovich, Jim, Willson, Annie M.L., Dinh, Xuyen T., Johnson, Laura, Robertson, Kylie, Reid, Christopher A.R., Field, Judith, Butzkueven, Helmut, and Baxter, Alan G. (2024) Transcriptional network analysis of peripheral blood leukocyte subsets in multiple sclerosis identifies a pathogenic role for a cytotoxicity‐associated gene network in myeloid cells. Immunology & Cell Biology, 102 (8). pp. 702-720.

Jensen, Sacha A., Atwa, Ondine, and Handford, Penny A. (2021) Assembly assay identifies a critical region of human fibrillin-1 required for 10 - 12 nm diameter microfibril biogenesis. PLoS ONE, 16 (3). e0248532.

K

Kuddus, Md Abdul, McBryde, Emma S., Adekunle, Adeshina I., White, Lisa J., and Meehan, Michael T. (2022) Mathematical analysis of a two-strain tuberculosis model in Bangladesh. Scientific Reports, 12. 3634.

Krishnan, Anirudh, Chilton, Emily, Raman, Jaishankar, Saxena, Pankaj, McFarlane, Craig, Trollope, Alexandra F., Kinobe, Robert, and Chilton, Lisa (2021) Are interactions between epicardial adipose tissue, cardiac fibroblasts and cardiac myocytes instrumental in atrial fibrosis and atrial fibrillation? Cells, 10 (9). 2501.

Kreuter, Roxane, Wankell, Miriam, Ahlenstiel, Golo, and Hebbard, Lionel (2019) The role of obesity in inflammatory bowel disease. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 1865 (1). pp. 63-72.

L

Lopes Floro, Kylie, Gillman, Rhys, Wankell, Miriam, Dewdney, Brittany, Chilkuri, Madhavi, Shackelford, Ashley, Kuma, Leslie, Powers, Marcus, and Hebbard, Lionel (2025) A New Model to Investigate the Action of Radiation and Cigarette Smoke on Head and Neck Cancer Cells. Cancers, 17. 1346.

Lane, Melissa M., Travica, Nikolaj, Gamage, Elizabeth, Marshall, Skye, Trakman, Gina L., Young, Claire, Teasdale, Scott B., Dissanayaka, Thusharika, Dawson, Samantha L., Orr, Rebecca, Jacka, Felice N., O'Neil, Adrienne, Lawrence, Mark, Baker, Phillip, Rebholz, Casey M., Du, Shutong, and Marx, Wolfgang (2024) Sugar-Sweetened Beverages and Adverse Human Health Outcomes: An Umbrella Review of Meta-Analyses of Observational Studies. Annual Review of Nutrition, 44. pp. 383-404.

Longhitano, Calogero, Finlay, Sabine, Peachey, Isabella, Swift, Jaymee-Leigh, Fayet-Moore, Flavia, Bartle, Toby, Vos, Gideon, Rudd, Donna, Shareef, Omer, Gordon, Shaileigh, Azghadi, Mostafa Rahimi, Campbell, Iain, Sethi, Shebani, Palmer, Christopher, and Sarnyai, Zoltan (2024) The effects of ketogenic metabolic therapy on mental health and metabolic outcomes in schizophrenia and bipolar disorder: a randomized controlled clinical trial protocol. Frontiers in Nutrition, 11. 1444483.

Liu, Zhiwei, Sarathkumara, Yomani, Chan, John K.C., Kwong, Yok-Lam, Lam, Tai Hing, Ip, Dennis Kai Ming, Chiu, Brian C.-H., Xu, Jun, Su, Yu-Chieh, Proietti, Carla, Cooper, Martha, Yu, Kelly J., Bassig, Bryan, Liang, Raymond, Hu, Wei, Ji, Bu-Tian, Coghill, Anna E., Pfeiffer, Ruth M., Hildesheim, Allan, Rothman, Nathaniel, Doolan, Denise, and Lan, Qing (2021) Characterization of the humoral immune response to the EBV proteome in extranodal NK/T-cell lymphoma. Scientific Reports, 11. 23664.

Lai, Xin, Eberhardt, Martin, Schmitz, Ulf, and Vera, Julio (2019) Systems biology-based investigation of cooperating microRNAs as monotherapy or adjuvant therapy in cancer. Nucleic Acids Research, 47 (15). pp. 7753-7766.

Lai, Xin, Gupta, Shailendra K., Schmitz, Ulf, Marquardt, Stephan, Knoll, Susanne, Spitschak, Alf, Wolkenhauer, Olaf, Pützer, Brigitte M., and Vera, Julio (2018) MiR-205-5p and miR-342-3p cooperate in the repression of the E2F1 transcription factor in the context of anticancer chemotherapy resistance. Theranostics, 8 (4). pp. 1106-1120.

Lloyd, Janice, Ariel, Ellen, Adams, Dayna, and Owens, Leigh (2012) Environmental enrichment for sea turtles in rehabilitation: preliminary study. In: Australian Wildlife Rehabilitation Council. pp. 1-2. From: 2012 Australian Wildlife Rehabilitation Council, 16-20 July 2012, Townsville, QLD, Australia.

Lloyd, Janice, Ariel, Ellen, Adams, Dayna, and Owens, Leigh (2012) Environmental enrichment in hospitalised sea turtles. In: Sea Turtle Health and Rehabilitation Workshop. p. 1. From: 2nd Annual Sea Turtle Health and Rehabilitation Workshop, 18-20 July 2012, Townsville, QLD, Australia. (Unpublished)

M

McGuinness, Amelia J., O’Hely, Martin, Stupart, Douglas, Watters, David, Dawson, Samantha L., Hair, Christopher, Berk, Michael, Mohebbi, Mohammadreza, Loughman, Amy, Guest, Glenn, and Jacka, Felice N. (2024) Depressive Symptoms and Gut Microbiota after Bowel Preparation and Colonoscopy: A Pre–Post Intervention Study. Microorganisms, 12. 1960.

Moran, Megan N., Jones, D.B., Jensen, S.A., Marcoli, R., and Jerry, D. R. (2024) Optimising commercial traits through gene editing in aquaculture: Strategies for accelerating genetic improvement. Reviews in Aquaculture, 16 (3). pp. 1127-1159.

McGuinness, Amelia J., O’Hely, Martin, Stupart, Douglas, Watters, David, Dawson, Samantha L., Hair, Christopher, Berk, Michael, Mohebbi, Mohammadreza, Loughman, Amy, Guest, Glenn, and Jacka, Felice N. (2024) Prior Appendicectomy and Gut Microbiota Re-Establishment in Adults after Bowel Preparation and Colonoscopy. Biomedicines, 12 (9). 1938.

Marx, Wolfgang, Veronese, Nicola, Kelly, Jaimon T., Smith, Lee, Hockey, Meghan, Collins, Sam, Trakman, Gina L., Hoare, Erin, Teasdale, Scott B., Wade, Alexandra, Lane, Melissa, Aslam, Hajara, Davis, Jessica A., O'Neil, Adrienne, Shivappa, Nitin, Hebert, James R., Blekkenhorst, Lauren C., Berk, Michael, Segasby, Toby, and Jacka, Felice (2021) The Dietary Inflammatory Index and human health: an umbrella review of meta-analyses of observational studies. Advances in Nutrition, 12 (5). pp. 1681-1690.

Monteuuis, Geoffray, Schmitz, Ulf, Petrova, Veronika, Kearney, Padraic S., and Rasko, John E.J. (2020) Holding on to junk bonds: intron retention in cancer and therapy. Cancer Research, 81 (4). pp. 779-789.

Marshall, Kristy, Shakya, Sabina, Greenhill, Andrew R., Padilla, Gabriel, Baker, Anthony, and Warner, Jeffrey M. (2010) Antibiosis of burkholderia ubonensis againist burkholderia pseudomallei, the causative agent for melioidosis. Southeast Asian Journal of Tropical Medicine and Public Health, 41 (4). pp. 904-912.

Munday, J.S., French, A.F., Smith, A., Wang, J., and Squires, R.A. (2008) Probable malignant catarrhal fever presented as transient generalised crusting dermatitis in a cow. New Zealand Veterinary Journal, 56 (2). pp. 89-93.

Mϋnch, G. (2005) Glycation and physiological mechanisms of its prevention in Alzheimer's disease. In: Sames, Klaus, Sethe, Sebastian, and Stolzing, Alexandra, (eds.) Extending the Lifespan: biotechnical, gerontological and social problems. LIT Verlag, Mϋnster, Germany, pp. 103-106.

Munro, James Leslie (2006) The epidemiology of gill-associated virus in Penaeus monodon and the development of alternative detection methods. PhD thesis, James Cook University.

N

Nezafati, Pouya, Saxena, Pankaj, Raman, Jaishankar, Hebbard, Lionel, and McFarlane, Craig (2025) Getting to the heart of sarcopenia and cardiovascular disease. Aging-US. (In Press)

Nezafati, Pouya, McFarlane, Craig, Hebbard, Lionel, Saxena, Pankaj, and Raman, Jai (2024) Abstract 4145958: Quantification of Sarcopenia in Chest Computed Tomography Prognosticates Cardiac Surgery Outcome. Circulation, 150 (Suppl_1). A4145958.

Németh, Dezső, Vékony, Teodóra, Orosz, Gábor, Sarnyai, Zoltan, and Zmigrod, Leor (2024) The interplay between subcortical and prefrontal brain structures in shaping ideological belief formation and updating. Current Opinion in Behavioral Sciences, 57. 101385.

Nugraha, Ari, Wongso, Hendris, Pratoko, Dwi Koko, and Wangchuk, Phurpa (2023) Enokitake (Flammulina velutipes). In: Sharma, Ajay, Bhardwaj, Garima, and Nayik, Gulzar Ahmad, (eds.) Phytochemistry and Nutritional Composition of Significant Wild Medicinal and Edible Mushrooms: Traditional Uses and Pharmacology. Royal Society of Chemistry, London, UK, pp. 165-200.

Naseem, Muhammad Noman, Allavena, Rachel, Raza, Ali, Constantinoiu, Constantin, McGowan, Michael, Turni, Conny, Kamran, Muhammad, Tabor, Ala E., and James, Peter (2023) Pathology and pathogenesis of cutaneous lesions in beef cattle associated with buffalo fly infestation. Frontiers in Veterinary Science, 9. 971813.

Naseem, Muhammad Noman, Turni, Conny, Gilbert, Rosalind, Raza, Ali, Allavena, Rachel, McGowan, Michael, Constantinoiu, Constantin, Ong, Chian Teng, Tabor, Ala E., and James, Peter (2022) Role of Staphylococcus agnetis and Staphylococcus hyicus in the Pathogenesis of Buffalo Fly Skin Lesions in Cattle. Microbiology Spectrum, 10 (4). e00873-22.

Naseem, Muhammad Noman, Raza, Ali, Allavena, Rachel, McGowan, Michael, Morgan, Jess A.T., Constantinoiu, Constantin, Tabor, Ala E., and James, Peter (2021) Development and validation of novel PCR assays for the diagnosis of bovine Stephanofilariasis and detection of Stephanofilaria sp. nematodes in vector flies. Pathogens, 10 (9). 1211.

O

Owens, Leigh, and Elliman, Jennifer (2025) Effect of husbandry on the emergence of pathogens in the aquaculture of redclaw crayfish (Cherax quadricarinatus) in Australia. Aquaculture, 603. 742380.

O'Brien, Paul A., Robbins, Steven J., Tan, Shangjin, Rix, Laura, Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2024) Comparative genomics identifies key adaptive traits of sponge‐associated microbial symbionts. Environmental Microbiology, 26 (9). e16690.

Oehler, Josphine B., Wright, Helen, Stark, Zornitza, Mallett, Andrew, and Schmitz, Ulf (2023) The application of long‑read sequencing in clinical settings. Human Genomics, 17. 73.

Obeid, Stephanie, Wankell, Miriam, Charrez, Berenice, Sternberg, Jade, Kreuter, Roxane, Esmaili, Saeed, Ramezani-Moghadam, Mehdi, Devine, Carol, Read, Scott, Bhathal, Prithi, Lopata, Andreas, Ahlenstiel, Golo, Qiao, Liang, George, Jacob, and Hebbard, Lionel (2017) Adiponectin confers protection from acute colitis and restricts a B cell immune response. Journal of Biological Chemistry, 292 (16). pp. 6569-6582.

Owens, Leigh, and Busico-Salcedo, Nancy (2006) Vibrio harveyi: pretty problems in paradise. In: Thompson, Fabiano L., Austin, Brian, and Swings, Jean, (eds.) The Biology of Vibrios. ASM Press, Washington, DC, pp. 266-280.

P

Pertiwi, Kartika R., Hillman, Rachael M., Scott, Coralie A., and Chilton, Lisa (2019) Ischemia Reperfusion Injury Produces, and Ischemic Preconditioning Prevents, Rat Cardiac Fibroblast Differentiation: Role of KATP Channels. Journal of Cardiovascular Development and Disease, 6 (2). 22.

Paris, D.B.B.P., Taggart, D.A., Paris, M.C.J., Temple-Smith, P.D., and Renfree, M.B. (2005) Distribution of spermatozoa and copulatory plug in relation to the time of mating and ovulation in the female tammar wallaby (Macropus eugenii). Reproduction, Fertility and Development, 17 (2). p. 249.

Paris, D.B.B.P., Taggart, D.A., Shimmin, G.A., Renfree, M.B., and Paris, M.C.J. (2003) Anatomical considerations for the development of artificial insemination by catheter in two marsupials. Theriogenology, 59 (1). p. 401.

Paris, Damien B.B.P., Taggart, David A., Temple-Smith, Peter D., Shaw, Geoffrey, and Renfree, Marilyn B. (2003) Timing of intrauterine artificial insemination (IUAI) in relation to ovulation in the tammar wallaby, Macropus eugenii. In: Abstracts from the Australian Mammal Society Annual General Meeting. p. 25. From: 49th Australian Mammal Society Annual General Meeting, 7-9 July 2003, Sydney, NSW, Australia.

Q

Qin, Jilong, Hong, Yaoqin, Maczuga, Nicholas T., Morona, Renato, and Totsika, Makrina (2025) Tolerance mechanisms in polysaccharide biosynthesis: Implications for undecaprenol phosphate recycling in Escherichia coli and Shigella flexneri. PLoS Genetics, 21 (1). e1011591.

R

Ross, Ailie, Wight, Joel, and Rudd, Donna (2025) Low flow: Selecting a limited flow cytometry panel where resources are constrained. Blood Reviews. 101284. (In Press)

Rahaman, Md. Mizanur, Sharma, Bhavya, Talukder, Saranika, Uddin, Muhammad Jasim, Siddik, Muhammad A.B., and Sarker, Subir (2025) Viral Threats to Australian Fish and Prawns: Economic Impacts and Biosecurity Solutions—A Systematic Review. Viruses, 17 (5). 692.

Rahaman, Md. Mizanur, Wangchuk, Phurpa, and Sarker, Subir (2025) A systematic review on the role of gut microbiome in inflammatory bowel disease: Spotlight on virome and plant metabolites. Microbial Pathogenesis, 205. 107608.

Raza, Ali, Schulz, Benjamin L., Nouwens, Amanda, Naseem, Muhammad Noman, Kamran, Muhammad, Mantilla Valdivieso, Emily F., Kerr, Edward D., Constantinoiu, Constantin, Jonsson, Nicholas N., James, Peter, and Tabor, Ala E. (2023) Application of quantitative proteomics to discover biomarkers for tick resistance in cattle. Frontiers in Immunology, 14. 1091066.

Robertson, Ian B., Dias, Hans F., Osuch, Isabelle H., Lowe, Edward D., Jensen, Sacha A., Redfield, Christina, and Handford, Penny A. (2017) The N-terminal region of Fibrillin-1 mediates a bipartite interaction with LTBP1. Structure, 25 (8). 1208-1221.e5.

Ryan, Danica, and Black, Mary Jane (2015) Preterm birth and/or factors that lead to preterm delivery: effects on the neonatal kidney. Journal of Neonatal Biology, 4 (1). pp. 93-104.

Rusaini (2006) The lymphoid organ in penaeids and it's interaction with moulting. Masters (Research) thesis, James Cook University.

S

Sarker, Subir, Talukder, Saranika, Athukorala, Ajani, and Whiteley, Pam L. (2025) The Spleen Virome of Australia’s Endemic Platypus Is Dominated by Highly Diverse Papillomaviruses. Viruses, 17 (2). 176.

Sarker, Subir, Talukder, Saranika, Athukorala, Ajani, and Whiteley, Pam L. (2025) The Spleen Virome of Australia’s Endemic Platypus Is Dominated by Highly Diverse Papillomaviruses. Viruses, 17 (2). 176.

Sarker, Subir, Talukder, Saranika, Bhuiyan, Md Safiul Alam, and Haque, Md Hakimul (2024) Genomic characterization of parvovirus and beak and feather disease virus in cockatiel (Nymphicus hollandicus). Microbiology Resource Announcements, 13 (12). e00820-24.

Sorenson, A.E., and Schaeffer, P.M. (2024) A self-assembling protein–DNA complex with an inbuilt DNA release system for quantitative immuno-PCR applications. Sensors & Diagnostics, 3. pp. 1976-1983.

Sunarto, Agus, Grimm, Jessica, McColl, Kenneth A., Ariel, Ellen, Krishnankutty Nair, Kiran, Corbeil, Serge, Hardaker, Talia, Tizard, Mark, Strive, Tanja, and Holmes, Bonnie (2022) Bioprospecting for biological control agents for invasive tilapia in Australia. Biological Control, 174. 105020.

Schmitz, Ulf, Monteuuis, Geoffray, Petrova, Veronika, Shah, Jaynish S., and Rasko, John E.J. (2021) Computational methods for intron retention identification and quantification. In: Wolkenhauer, Olaf, Cai, Yudong, and Rozman, Damjana, (eds.) Systems Medicine: integrative, qualitative and computational approaches. Academic Press, London Wall, United Kingdom, pp. 63-74.

Sweet, Michael, Villela, Helena, Keller-Costa, Tina, Costa, Rodrigo, Romano, Stefano, Bourne, David G., Cárdenas, Anny, Huggett, Megan J., Kerwin, Allison H., Kuek, Felicity, Medina, Monica, Meyer, Julie L., Müller, Moritz, Pollock, F. Joseph, Rappé, Michael S., Sere, Mathieu, Sharp, Koty H., Voolstra, Christian R., Zaccardi, Nathan, Ziegler, Maren, and Peixoto, Raquel (2021) Insights into the cultured bacterial fraction of corals. mSystems, 6 (3). e01249-20.

Sutherland, Megan R., Vojisavljevic, Danica, and Black, Mary Jane (2020) A practical guide to the stereological assessment of glomerular number, size, and cellular composition. The Anatomical Record, 303 (10). pp. 2679-2692.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., and Strugnell, Jan M. (2017) Epipodial tentacle gene expression and predetermined resilience to summer mortality in the commercially important greenlip abalone, Haliotis laevigata. Marine Biotechnology, 19 (2). pp. 191-205.

Schmitz, Ulf, Pinello, Natalia, Jia, Fangzhi, Alasmari, Sultan, Ritchie, William, Keightley, Maria-Cristina, Shini, Shaniko, Lieschke, Graham J., Wong, Justin J-L., and Rasko, John E.J. (2017) Intron retention enhances gene regulatory complexity in vertebrates. Genome Biology, 18. 216.

Sutherland, Megan R., Ryan, Danica, Dahl, Mar Janna, Albertine, Kurt, and Black, Mary Jane (2016) Effects of preterm birth and ventilation on glomerular capillary growth in the neonatal lamb kidney. Journal of Hypertension, 34 (10). pp. 1988-1997.

Schmitz, Ulf, and Wolkenhauer, Olaf (2016) Systems medicine. Methods in Molecular Biology, 1386 . Springer, New York, USA.

Sutherland, Megan, Ryan, Dana, Black, Mary Jane, and Kent, Alison (2014) Long-term renal consequences of preterm birth. Clinics in Perinatology, 41 (3). pp. 561-573.

Smith, A., Bourdeau, I., Wang, J., and Bondy, C.A. (2005) Expression of Catenin family members CTNNA1, CTNNA2, CTNNB1 and JUP in the primate prefrontal cortex and hippocampus. Molecular Brain Research, 135 (1-2). pp. 225-231.

Smith, A., Wang, J., Cheng, C.M., Weickert, C.S., and Bondy, C.A. (2004) High-level expression of Dok-1 in neurons of the primate prefrontal cortex and hippocampus. Journal of Neuroscience Research, 75 (2). pp. 218-224.

Shinzato, Chuya (2007) Cnidarian Sox genes and the evolution of function in the Sox gene family. PhD thesis, James Cook University.

T

Trace, Angela, Wankell, Miriam, McFarlane, Craig, and Hebbard, Lionel (2025) The challenges of using fish cells for cultivated seafood production. Food Science and Biotechnology, 34. pp. 1565-1579.

V

Vojisavljevic, Danica, Rudd, Donna, Smith, Roger, and Kandasamy, Yogavijayan (2024) The Relationship between Maternal Smoking and Infant Birth Weight: Improving Accuracy through Urine Cotinine Analysis and Effective Medical Record Strategies. Children, 11 (8). 1028.

Vanichkina, Darya P., Schmitz, Ulf, Wong, Justin J.-L., and Rasko, John E.J. (2018) Challenges in defining the role of intron retention in normal biology and disease. Seminars in Cell and Developmental Biology, 75. pp. 40-49.

W

Whyte, Stephen, Kaburagi, Ryotaro, Gan, Victor, Candido, Christhina, Avazpour, Behnaz, Fatourehchi, Dorsa, Chan, Ho Fai, Dong, Yue, Dulleck, Uwe, Finlay, Sabine, Zhou, Jin, Hewson, Nick, Li, Tong, Maxwell, Duncan, McNulty, Craig, and Sarnyai, Zoltan (2024) Exploring the Benefits of Mass Timber Construction in the Workplace: A Novel Primer for Research. Buildings, 14. 2072.

Walker, Sarah, Wankell, Miriam, White, Rose, Ho, Vikki, Deo, Nikita, Devine, Carol, Dewdney, Brittany, Bhathal, Prithi, Govaere, Olivier, Roskams, Tania, Qiao, Liang, George, Jacob, and Hebbard, Lionel (2019) Targeting mTOR and Src restricts hepatocellular carcinoma growth in a novel murine liver cancer model. PLoS One, 14 (2). e0212860.

Wu, Guang, Wilson, George, George, Jacob, Liddle, Christopher, Hebbard, Lionel, and Liang, Qiao (2017) Overcoming treatment resistance in cancer: current understanding and tactics. Cancer Letters, 387. pp. 69-76.

Wong, Justin J.-L., Au, Amy Y.M., Gao, Dada, Pinello, Natalia, Kwok, Chau-To, Thoeng, Annora, Lau, Katherine A., Gordon, Jane E.A., Schmitz, Ulf, Feng, Yue, Nguyen, Trung V., Middleton, Robert, Bailey, Charles G., Holst, Jeff, Rasko, John E.J., and Ritchie, William (2016) RBM3 regulates temperature sensitive miR-142-5p and miR-143 (thermomiRs), which target immune genes and control fever. Nucleic Acids Research, 44 (6). pp. 2888-2897.

Wang, J., Cheng, C.M., Zhou, J., Smith, A., Shannon Weickert, C., Perlman, W.R., Becker, K.G., Powell, D., and Bondy, C.A. (2004) Estradiol alters transcription factor gene expression in primate prefrontal cortex. Journal of Neuroscience Research, 76 (3). pp. 306-314.

Z

Zhou, Gang, Da Won Bae, Sarah, Nguyen, Romario, Huo, Xiaoqi, Han, Shuanglin, Zhang, Zhiqiang, Hebbard, Lionel, Duan, Wei, Eslam, Mohammed, Liddle, Christopher, Yuen, Lawrence, Lam, Vincent, Qiao, Liang, and George, Jacob (2021) An aptamer-based drug delivery agent (CD133-apt-Dox) selectively and effectively kills liver cancer stem-like cells. Cancer Letters, 501. pp. 124-132.

This list was generated on Mon Aug 11 22:26:16 2025 AEST.