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Tol, Samantha J., Coles, Rob G., and Congdon, Bradley C. (2016) Dugong dugon feeding in tropical Australian seagrass meadows: implications for conservation planning. PeerJ, 4. e2194.

Pusey, Bradley J., Kennard, Mark J., Larson, Helen K., Alsop, Quentin, Hammer, Michael, and Buckle, Duncan J. (2016) Estuarine fishes of the South Alligator River, Kakadu National Park, northern Australia. Marine and Freshwater Research, 67 (12). pp. 1797-1812.

Udyawer, V., Simpfendorfer, C.A., Read, M., Hamann, M., and Heupel, M.R. (2016) Exploring habitat selection in sea snakes using passive acoustic monitoring and Bayesian hierarchical models. Marine Ecology Progress Series, 546. pp. 249-262.

Epstein, Hannah E., Templeman, Michelle A., and Kingsford, Michael J. (2016) Fine-scale detection of pollutants by a benthic marine jellyfish. Marine Pollution Bulletin, 107 (1). pp. 340-346.

Sheaves, Marcus, Baker, Ronnie, Abrantes, Kátya G., and Connolly, Rod M. (2016) Fish biomass in tropical estuaries: substantial variation in food web structure, sources of nutrition and ecosystem-supporting processes. Estuaries and Coasts, 40 (2). pp. 580-593.

Guo, Zixiao, Huang, Yelin, Chen, Yongmei, Duke, Norman C., Zhong, Cairong, and Shi, Sugua (2016) Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region. Journal of Biogeography, 43. pp. 1856-1868.

Benham, Claudia F., Beavis, Sara G., Hendry, Rebecca A., and Jackson, Emma L. (2016) Growth effects of shading and sedimentation in two tropical seagrass species: implications for port management and impact assessment. Marine Pollution Bulletin, 109 (1). pp. 461-470.

Dutra, Leo X.C., Dichmont, Catherine M., van Putten, Ingrid E., Thébaud, Oliver, Deng, Roy A., Pascual, Ricardo, Owens, Randall, Jebreen, Eddie, Thompson, Carolyn, Warne, M.St.J., Quinn, R., Bennett, J., Read, M., Wachenfeld, D., Collier, Catherine, Waycott, Michelle, Davies, J., Garland, A., Dunning, M., and Playford, J. (2016) How important is the coast? A survey of coastal objectives in an Australian regional city. Marine Policy, 71. pp. 229-241.

Shimada, Takahiro, Jones, Rhondda, Limpus, Colin, Groom, Rachel, and Hamann, Mark (2016) Long-term and seasonal patterns of sea turtle home ranges in warm coastal foraging habitats: implications for conservation. Marine Ecology Progress Series, 562. pp. 163-179.

Howells, E.J., Willis, B.L., Bay, L.K., and van Oppen, M.J.H. (2016) Microsatellite allele sizes alone are insufficient to delineate species boundaries in Symbiodinium. Molecular Ecology, 25 (12). pp. 2719-2723.

Lawn, R.J., and Cottrell, A. (2016) Seeds of Vigna marina (Burm.) Merrill survive up to 25 years flotation in salt water. The Queensland Naturalist, 54 (1-3). pp. 3-13.

Grech, Alana, Wolter, Jolan, Coles, Rob, McKenzie, Len, Rasheed, Michael, Thomas, Christopher, Waycott, Michelle, and Hanert, Emmanuel (2016) Spatial patterns of seagrass dispersal and settlement. Diversity and Distributions, 22 (11). pp. 1150-1162.

Vermeiren, Peter, Abrantes, Kátya, and Sheaves, Marcus (2015) Generalist and specialist feeding crabs maintain discrete trophic niches within and among estuarine locations. Estuaries and Coasts, 38 (6). pp. 2070-2082.

Heenkenda, Muditha K., Joyce, Karen E., Maier, Stefan W., and de Bruin, Sytze (2015) Quantifying mangrove chlorophyll from high spatial resolution imagery. ISPRS Journal of Photogrammetry and Remote Sensing, 108. pp. 234-244.

Udyawer, Vinay, Simpfendorfer, Colin A., and Heupel, Michelle R. (2015) Diel patterns in three-dimensional use of space by sea snakes. Animal Biotelemetry, 3. 29. pp. 1-9.

Negri, Andrew P., Flores, Florita, Mercurio, Phil, Mueller, Jochen F., and Collier, Catherine J. (2015) Lethal and sub-lethal chronic effects of the herbicide diuron on seagrass. Aquatic Toxicology, 165. pp. 73-83.

Baker, Daniel W., Sardella, Brian, Rummer, Jodie L., Sackville, Michael, and Brauner, Colin J. (2015) Hagfish: champions of CO2 tolerance question the origins of vertebrate gill function. Scientific Reports, 5. 11182.

Heenkenda, Muditha K., Joyce, Karen E., and Maier, Stefan W. (2015) Mangrove tree crown delineation from high-resolution imagery. Photogrammetric Engineering & Remote Sensing, 81 (6). pp. 471-479.

Scott, A., and Baird, A.H. (2015) Trying to find Nemo: low abundance of sea anemones and anemonefishes on central and southern mid-shelf reefs in the Great Barrier Reef. Marine Biodiversity, 45 (2). pp. 327-331.

Ow, Y.X., Collier, C.J., and Uthicke, S. (2015) Responses of three tropical seagrass species to CO2 enrichment. Marine Biology, 162 (5). pp. 1005-1017.

Bouwmeester, Jessica, Benzoni, Francesca, Baird, Andrew H., and Berumen, Michael L. (2015) Cyphastrea kausti sp n. (Cnidaria, Anthozoa, Scleractinia), a new species of reef coral from the Red Sea. ZooKeys, 496. pp. 1-13.

Bouwmeester, J., Baird, A.H., Chen, C.J., Guest, J.R., Vicentuan, K.C., and Berumen, M.L. (2015) Multi-species spawning synchrony within scleractinian coral assemblages in the Red Sea. Coral Reefs, 34 (1). pp. 65-77.

Sheaves, Marcus, Baker, Ronald, Nagelkerken, Ivan, and Connolly, Rod M. (2015) True value of estuarine and coastal nurseries for fish: incorporating complexity and dynamics. Estuaries and Coasts, 38 (2). pp. 401-414.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, Mercurio, Phil, O'Brien, Jake, Ralph, Peter J., and Negri, Andrew P. (2015) A miniature bioassay for testing the acute phytotoxicity of Photosystem II herbicides on seagrass. PLoS ONE, 10 (2). e0117541. pp. 1-17.

Abrantes, Kátya G., Johnston, Ross, Connolly, Rod M., and Sheaves, Marcus (2015) Importance of mangrove carbon for aquatic food webs in wet–dry tropical estuaries. Estuaries and Coasts, 38 (1). pp. 383-399.

Vermeiren, Peter, and Sheaves, Marcus (2015) Predictable habitat associations of four crab species across the low intertidal landscape of a tropical estuary over time. Estuaries and Coasts, 38 (1). pp. 285-295.

Buelow, Christina, and Sheaves, Marcus (2015) A birds-eye view of biological connectivity in mangrove systems. Estuarine, Coastal and Shelf Science, 152. pp. 33-43.

Kamrowski, Ruth L., Sutton, Stephen G., Tobin, Renae C., and Hamann, Mark (2015) Balancing artificial light at night with turtle conservation? Coastal community engagement with light-glow reduction. Environmental Conservation, 42 (2). pp. 171-181.

Keith, Sally A., Woolsey, E.S., Madin, J.S., Byrne, M., and Baird, A.H. (2015) Differential establishment potential of species predicts a shift in coral assemblage structure across a biogeographic barrier. Ecography, 38 (12). pp. 1225-1234.

Murray, Nicholas J., and Fuller, Richard A. (2015) Protecting stopover habitat for migratory shorebirds in East Asia. Journal of Ornithology, 156 (Suppl 1). S217-S225.

White, William T., Appleyard, Sharon A., Sabub, Benthly, Kyne, Peter M., Harris, Mark, Lis, Rickson, Baje, Leontine, Usu, Thomas, Smart, Jonathan J., Corrigan, Shannon, Yang, Lei, and Naylor, Gavin J.P. (2015) Rediscovery of the threatened river sharks, Glyphis garricki and G. glyphis, in Papua New Guinea. PLoS ONE, 10. e0140075. pp. 1-15.

Perry, Chris T., Murphy, Gary N., Graham, Nicholas A.J., Wilson, Shaun K., Januchowski-Hartley, Fraser A., and East, Holly K. (2015) Remote coral reefs can sustain high growth potential and may match future sea-level trends. Scientific Reports, 5. 18289. pp. 1-8.

Thomson, Alexandra C.G., York, Paul H., Smith, Timothy M., Sherman, Craig D.H., Booth, David J., Keough, Michael J., Ross, D. Jeff, and Macreadie, Peter I. (2015) Seagrass viviparous propagules as a potential long-distance dispersal mechanism. Estuaries and Coasts, 38. pp. 927-940.

Correia, M., Caldwell, I.R., Koldewey, H.J., Andrade, J.P., and Palma, J. (2015) Seahorse (Hippocampinae) population fluctuations in the Ria Formosa Lagoon, south Portugal. Journal of Fish Biology, 87 (3). pp. 679-690.

Flint, Nicole, Crossland, Michael R., and Pearson, Richard G. (2015) Sublethal effects of fluctuating hypoxia on juvenile tropical Australian freshwater fish. Marine and Freshwater Research, 66 (4). pp. 293-304.

Madin, J.S., Kuo, C-Y., Martinelli, J.C, Mizerek, T., and Baird, A.H. (2015) Very high coral cover at 36° S on the east coast of Australia. Coral Reefs, 34 (1). p. 327.

Nagelkerken, Ivan, Sheaves, Marcus, Baker, Ronald, and Connolly, Rod M. (2015) The seascape nursery: a novel spatial approach to identify and manage nurseries for coastal marine fauna. Fish and Fisheries, 16 (2). pp. 362-371.

Pearson, Richard G. (2014) Dynamics of invertebrate diversity in a tropical stream. Diversity, 6 (4). pp. 771-791.

Jarvis, Jessie C., Moore, Kenneth A., and Kenworthy, W. Judson (2014) Persistence of Zostera marina L. (eelgrass) seeds in the sediment seed bank. Journal of Experimental Marine Biology and Ecology, 459. pp. 126-136.

dei Marcovaldi, Maria A.G., Santos, Armando J.B., Santos, Alexsandro S., Soares, Luciano S., Lopez, Gustave G., Godfrey, Matthew H., López-Mendilaharsu, Milagros, and Fuentes, Mariana M.P.B. (2014) Spatio-temporal variation in the incubation duration and sex ratio of hawksbill hatchlings: implication for future management. Journal of Thermal Biology, 44. pp. 70-77.

Hutchinson, Neil, Jenkins, Gregory P., Brown, Andrew, and Smith, Timothy M. (2014) Variation with depth in temperate seagrass-associated fish assemblages in Southern Victoria, Australia. Estuaries and Coasts, 37 (4). pp. 801-814.

Short, Frederick T., Coles, Robert, Fortes, Miguel D., Victor, Steven, Salik, Maxwell, Isnain, Irwan, Andrew, Jay, and Seno, Aganta (2014) Monitoring in the Western Pacific region shows evidence of seagrass decline in line with global trends. Marine Pollution Bulletin, 83 (2). pp. 408-416.

Collier, C.J., and Waycott, M. (2014) Temperature extremes reduce seagrass growth and induce mortality. Marine Pollution Bulletin, 83 (2). pp. 483-490.

Graham, Nicholas A.J. (2014) Habitat complexity: coral structural loss leads to fisheries declines. Current Biology, 24 (9). R359-R361.

Collier, Catherine J., Villacorta-Rath, Cecilia, van Dijk, Kor-jent, Takahashi, Miwa, and Waycott, Michelle (2014) Seagrass proliferation precedes mortality during hypo-salinity events: a stress-induced morphometric response. PLoS ONE, 9 (4). e94014. pp. 1-11.

Keshavmurthy, Shashank, Meng, Pei-Jie, Wang, Jih-Terng, Kuo, Chao-Yang, Yang, Sung-Yin, Hsu, Chia-Min, Gan, Chai-Hsia, Dai, Chang-Feng, and Chen, Chaolun Allen (2014) Can resistant coral-Symbiodinium associations enable coral communities to survive climate change? A study of a site exposed to long-termhot water input. PeerJ, 2. e327. pp. 1-28.

Baker, Ronald, Buckland, Amanda, and Sheaves, Marcus (2014) Fish gut content analysis: robust measures of diet composition. Fish and Fisheries, 15 (1). pp. 170-177.

Welsh, Stuart A., Jerry, Dean R., and Burrows, Damien W. (2014) A new species of freshwater eel-tailed catfish of the genus Tandanus (Teleostei: Plotosidae) from the wet tropics region of Eastern Australia. Copeia, 1. pp. 136-142.

Macreadie, Peter I., York, Paul H., and Sherman, Craig D.H. (2014) Resilience of Zostera muelleri seagrass to small-scale disturbances: the relative importance of asexual versus sexual recovery. Ecology and Evolution, 4 (4). pp. 450-461.

Hagihara, Rie, Jones, Rhondda E., Grech, Alana, Lanyon, Janet M., Sheppard, James K., and Marsh, Helene (2014) Improving population estimates by quantifying diving and surfacing patterns: a dugong example. Marine Mammal Science, 30 (1). pp. 348-366.

Blair, David, McMahon, Adrian, McDonald, Brenda, Tikel, Daniela, Waycott, Michelle, and Marsh, Helene (2014) Pleistocene sea level fluctuations and the phylogeography of the dugong in Australian waters. Marine Mammal Science, 30 (1). pp. 104-121.

Davis, Ben, Mattone, Carlo, and Sheaves, Marcus (2014) Bottom-up control regulates patterns of fish connectivity and assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 175-186.

Silva, Catarina N.S., and Gardner, Jonathan P.A. (2014) Development and characterisation of 12 microsatellite markers for the New Zealand endemic scallop Pecten novaezelandiae. Conservation Genetics Resources, 6 (2). pp. 327-328.

Trave, Claudia, and Sheaves, Marcus (2014) Ecotone analysis: assessing the impact of vehicle transit on saltmarsh crab population and ecosystem. SpringerPlus, 3 (1). 655. pp. 1-9.

Zamora-Terol, Sara, Mckinnon, A. David, and Saiz, Enric (2014) Feeding and egg production of Oithona spp. in tropical waters of North Queensland, Australia. Journal of Plankton Research, 36 (4). pp. 1047-1059.

Arakaki, Seiji, Hutchinson, Neil, and Tokeshi, Mutsunori (2014) Foraging ecology of a large opportunistic predator (adult Lateolabrax latus) on a temperate-subtropical rocky shore. Coastal Ecosystems, 1. pp. 14-27.

Hsu, Chia-Min, de Palmas, Stéphane, Kuo, Chao-Yang, Denis, Vianney, and Chen, Chaolun Allen (2014) Identification of Scleractinian coral recruits using fluorescent censusing and DNA barcoding techniques. PLoS One, 9 (9). e107366-e107366.

Baker, Ronald, Fujiwara, Masami, and Minello, Thomas J. (2014) Juvenile growth and mortality effects on white shrimp Litopenaeus setiferus population dynamics in the northern Gulf of Mexico. Fisheries Research, 155. pp. 74-82.

Brunnschweiler, Juerg M., Abrantes, Kátya G., and Barnett, Adam (2014) Long-term changes in species composition and relative abundances of sharks at a provisioning site. PLoS ONE, 9 (1). e86682. pp. 1-10.

Meyer Steiger, D.B., Ritchie, S.A., and Laurance, S.G.W. (2014) Overcoming the challenges of mosquito (Diptera: Culicidae) sampling in remote localities: a comparison of CO2 attractants on mosquito communities in three tropical forest habitats. Journal of Medical Entomology, 51 (1). pp. 39-45.

Vermeiren, Peter, and Sheaves, Marcus (2014) Predicting habitat associations of five intertidal crab species among estuaries. Estuarine, Coastal and Shelf Science , 149. pp. 133-142.

Crossley, Roxanne, Collins, C. Matilda, Sutton, Stephen G., and Huveneers, Charlie (2014) Public perception and understanding of shark attack mitigation measures in Australia. Human Dimensions of Wildlife, 19 (2). pp. 154-165.

Sheaves, Marcus, Sheaves, Janine, Stegemann, Krista, and Molony, Brett (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Marine and Freshwater Research, 65 (2). pp. 114-123.

Davis, Ben, Baker, Ronald, and Sheaves, Marcus (2014) Seascape and metacommunity processes regulate fish assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 187-202.

Shimada, Takahiro, Aoki, Shigeru, Kameda, Kazunari, Hazel, Julia, Reich, Kimberly, and Kamezaki, Naoki (2014) Site fidelity, ontogenetic shift and diet composition of green turtles Chelonia mydas in Japan inferred from stable isotope analysis. Endangered Species Research, 25 (2). 151-164.

Parsons, D.M., Sim-Smith, C.J., Cryer, M., Francis, M.P., Hartill, B., Jones, E.G., Le Port, A., Lowe, M., McKenzie, J., Morrison, M., Paul, L.J., Radford, C., Ross, P.M., Spong, K.T., Trnski, T., Usmar, N., Walsh, C., and Zeldis, J. (2014) Snapper (Chrysophrys auratus): a review of life history and key vulnerabilities in New Zealand. New Zealand Journal of Marine and Freshwater Research, 48 (2). pp. 256-283.

Abrantes, Kátya G., Barnett, Adam, and Bouillon, Steven (2014) Stable isotope-based community metrics as a tool to identify patterns in food web structure in east African estuaries. Functional Ecology, 28 (1). pp. 270-282.

Arrigoni, Roberto, Richards, Zoe T., Chen, Chaolun Allen, Baird, Andrew H., and Benzoni, Francesca (2014) Taxonomy and phylogenetic relationships of the coral genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae). Contributions to Zoology, 83 (3). pp. 195-215.

Huang, Danwei, Benzoni, Francesca, Arrigoni, Roberto, Baird, Andrew H., Berumen, Michael, Bouwmeester, Jessica, Chou, Loke Ming, Fukami, Hironobu, Licuanan, Wilfredo Y., Lovell, Edward R., Meier, Rudolf, Todd, Peter A., and Budd, Ann F. (2014) Towards a phylogenetic classification of reef corals: the Indo-Pacific genera Merulina, Goniastrea and Scapophyllia (Scleractinia, Merulinidae). Zoologica Scripta, 43 (5). pp. 531-548.

Vermeiren, Peter, and Sheaves, Marcus (2014) A remote photographic technique for high replication, large scale understanding of spatial distribution patterns of intertidal crabs. Hydrobiologia, 724 (1). pp. 79-89.

Madsen, Alisha, Madin, Joshua S., Tan, Chun-Hong, and Baird, Andrew H. (2014) The reproductive biology of the scleractinian coral Plesiastrea versipora in Sydney Harbour, Australia. Sexuality and Early Development in Aquatic Organisms, 1 (1). pp. 25-33.

Kessel, S.T., Cooke, S.J., Heupel, M.R., Hussey, N.E., Simpfendorfer, C.A., Vagle, S., and Fisk, A.T. (2014) A review of detection range testing in aquatic passive acoustic telemetry studies. Reviews in Fish Biology and Fisheries, 24 (1). pp. 199-218.

Ma, Ka Yan, Sadovy de Mitcheson, Yvonne, and Chu, Ka Hou (2013) Isolation and characterization of microsatellite markers from the camouflage grouper, Epinephelus polyphekadion (Epinephelidae). Conservation Genetics Resources, 5 (4). pp. 1129-1132.

Calver, Michael C., Beatty, Stephen J., Bryant, Kate A., Dickman, Christopher R., Ebner, Brendan C., and Morgan, David L. (2013) Users beware: implications of database errors when assessing the individual research records of ecologists and conservation biologists. Pacific Conservation Biology, 19 (3/4). pp. 320-330.

Ryan, Katie Anne, Lintermans, Mark, Ebner, Brendan C., and Norris, Richard (2013) Using fine-scale overlap in predator–prey distribution to assess avian predation risk to a reservoir population of threatened Macquarie Perch. Freshwater Science, 32 (4). pp. 1057-1072.

Woolsey, Erika S., Byrne, Maria, and Baird, Andrew H. (2013) The effects of temperature on embryonic development and larval survival in two scleractinian corals. Marine Ecology Progress Series, 493. pp. 179-184.

Baird, Andrew H., Cumbo, Vivian R., Figueiredo, Joana, and Harii, Saki (2013) A pre-zygotic barrier to hybridization in two con-generic species of scleractinian corals. F1000Research, 2. 193. pp. 1-5.

Cumbo, Vivian R., Baird, Andrew H., Moore, Robert B., Negri, Andrew P., Neilan, Brett A., Salih, Anya, van Oppen, Madeleine J.H., Wang, Yan, and Marquis, Christopher P. (2013) Chromera velia is endosymbiotic in larvae of the reef corals Acropora digitifera and A. tenuis. Protist, 164 (2). pp. 237-244.

Knight, Jon M., Griffin, Lachlan, Dale, Pat E.R., and Sheaves, Marcus (2013) Short-term dissolved oxygen patterns in sub-tropical mangroves. Estuarine, Coastal and Shelf Science, 131. pp. 290-296.

Bridge, Tom C.L., Hoey, Andrew S., Campbell, Stuart J., Muttaquin, Efin, Rudi, Edi, Fadli, Nur, and Baird, Andrew H. (2013) Depth-dependent mortality of reef corals following a severe bleaching event: implications for thermal refuges and population recovery. F1000Research, 2. 187. pp. 1-12.

Thiem, Jason D., Broadhurst, Ben T., Lintermans, Mark, Ebner, Brendan C., Clear, Rhian C., and Wright, Daniel (2013) Seasonal differences in the diel movements of Macquarie perch (Macquaria australasica) in an upland reservoir. Ecology of Freshwater Fish, 22 (1). pp. 145-156.

Le Port, A., Pawley, M.D.M., and Lavery, S.D. (2013) Speciation of two stingrays with antitropical distributions: low levels of divergence in mitochondrial DNA and morphological characters suggest recent evolution. Aquatic Biology, 19. pp. 153-165.

Broadhurst, B.T., Ebner, B.C., Lintermans, M., Thiem, J.D., and Clear, R.C. (2013) Jailbreak: a fishway releases the endangered Macquarie perch from confinement below an anthropogenic barrier. Marine and Freshwater Research, 64 (9). pp. 900-908.

Baker, Ronald, Fry, Brian, Rozas, Lawrence P., and Minello, Thomas J. (2013) Hydrodynamic regulation of salt marsh contributions to aquatic food webs. Marine Ecology Progress Series, 490. pp. 37-52.

Horne, John B., Momigliano, Paolo, van Herwerden, Lynne, and Newman, Stephen J. (2013) Murky waters: searching for structure in genetically depauperate blue threadfin populations of Western Australia. Fisheries Research, 146. pp. 1-6.

Wen, Colin Kuo-Chang, Chen, Kao-Song, Hsieh, Hernyi Justin, Hsu, Chia-Min, and Chen, Chaolun Allen (2013) High coral cover and subsequent high fish richness on mature breakwaters in Taiwan. Marine Pollution Bulletin, 72 (1). pp. 55-63.

Starrs, D., Ebner, B.C., and Fulton, C.J. (2013) Can backcalculation models unravel complex larval growth histories in a tropical freshwater fish? Journal of Fish Biology, 83 (1). pp. 96-110.

Beasley, I., Pollock, K., Jefferson, T.A., Arnold, P., Morse, L., Sim, Y., Lor Kim, S., and Marsh, H. (2013) Likely future extirpation of another Asian river dolphin: the critically endangered population of the Irrawaddy dolphin in the Mekong River is small and declining. Marine Mammal Science, 29 (3). E226-E252.

Underwood, Avril H., Taylor, Sandra, and Seymour, Jamie E. (2013) Range extension of the Cubozoan, Tripedalia binata Moore (Cnideria: Carybdeida: Carybdeidae) from far north Queensland, Australia. Memoirs of the Queensland Museum - Nature, 56 (2). pp. 607-614.

McMahon, Kathryn, Collier, Catherine, and Lavery, Paul S. (2013) Identifying robust bioindicators of light stress in seagrasses: a meta-analysis. Ecological Indicators, 30. pp. 7-15.

Berg Soto, Alvaro, Cagnazzi, Daniele, Everingham, Yvette, Parra, Guido J., Noad, Michael, and Marsh, Helene (2013) Acoustic alarms elicit only subtle responses in the behaviour of tropical coastal dolphins in Queensland, Australia. Endangered Species Research, 20 (3). pp. 271-282.

Cooke, Steven J., Midwood, Jonathan D., Thiem, Jason D., Klimley, Peter, Lucas, Martin C., Thorstad, Eva B., Eiler, John, Holbrook, Chris, and Ebner, Brendan C. (2013) Tracking animals in freshwater with electronic tags: past, present and future. Animal Biotelemetry, 1 (May). 5. pp. 1-19.

Ebner, B.C., and Morgan, D.L. (2013) Using remote underwater video to estimate freshwater fish species richness. Journal of Fish Biology, 82 (5). pp. 1592-1612.

Udyawer, Vinay, Chin, Andrew, Knip, Danielle M., Simpfendorfer, Colin A., and Heupel, Michelle R. (2013) Variable response of coastal sharks to severe tropical storms: environmental cues and changes in space use. Marine Ecology Progress Series, 480. pp. 171-183.

Davis, Aaron M., Unmack, Peter. J., Pusey, Bradley J., Pearson, Richard G., and Morgan, David L. (2013) Ontogenetic development of intestinal length and relationships to diet in an Australasian fish family (Terapontidae). BMC Evolutionary Biology, 13. 53. pp. 1-16.

Donaldson, James A., Ebner, Brendan C., and Fulton, Christopher J. (2013) Flow velocity underpins microhabitat selection by gobies of the Australian Wet Tropics. Freshwater Biology, 58 (5). pp. 1038-1051.

Bell, Kris, Blomberg, Simon, and Schwarzkopf, Lin (2013) Detrimental influence on performance of high temperature incubation in a tropical reptile: is cooler better in the tropics? Oecologia, 171 (1). pp. 83-91.

Abrantes, Kátya, Barnett, Adam, Marwick, Trent R., and Bouillon, Steven (2013) Importance of terrestrial subsidies for estuarine food webs in contrasting East African catchments. Ecosphere, 4 (1). 14. pp. 1-33.

Waltham, Nathan J., and Connolly, Rod M. (2013) Artificial tidal lakes: built for humans, home for fish. Ecological Engineering, 60. pp. 414-420.

Baird, Andrew H., Nakamura, Takashi, and Yamasaki, Hideo (2013) Evolution of thermal thresholds: can corals adapt to projected rates of change in sea surface temperatures? Galaxea, Journal of Coral Reef Studies, 15 (Special Issue). pp. 366-372.

Smith, Timothy M., York, Paul, Stanley, Annalise M., Macreadie, Peter, Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2013) Microsatellite primer development for the seagrass Zostera nigricaulis (Zosteraceae). Conservation Genetics Resources, 5 (3). pp. 607-610.

Iwamura, Takuya, Possingham, Hugh P., Chadès, Iadine, Minton, Clive, Murray, Nicholas J., Rogers, Danny I., Treml, Eric A., and Fuller, Richard A. (2013) Migratory connectivity magnifies the consequences of habitat loss from sea-level rise for shorebird populations. Tohoku Journal of Experimental Medicine, 230 (1761). 20130325.

Sheaves, Marcus, Johnston, Ross, Johnson, Ashlee, Baker, Ronald, and Connolly, Rod M. (2013) Nursery function drives temporal patterns in fish assemblage structure in four tropical estuaries. Estuaries and Coasts, 36 (5). pp. 893-905.

Chin, A., Heupel, M.R., Simpfendorfer, C.A., and Tobin, A.J. (2013) Ontogenetic movements of juvenile blacktip reef sharks: evidence of dispersal and connectivity between coastal habitats and coral reefs. Aquatic Conservation, 23 (3). pp. 468-474.

Chick, Rowan C., Worthington, Duncan G., and Kingsford, Michael J. (2013) Restocking depleted wild stocks—long-term survival and impact of released blacklip abalone (Haliotis rubra) on depleted wild populations in New South Wales, Australia. Reviews in Fisheries Science, 21 (3-4). pp. 321-340.

Wen, Colin K.C., Pratchett, Morgan S., Almany, Glenn R., and Jones, Geoffrey P. (2013) Role of prey availability in microhabitat preferences of juvenile coral trout (Plectropomus: Serranidae). Journal of Experimental Marine Biology and Ecology, 443. pp. 39-45.

Yuen, Yeong Shyan, Yamazaki, Seitaro S., Baird, Andrew H., Nakamura, Takashi, and Yamasaki, Hideo (2013) Sulfate-reducing bacteria in the skeleton of the massive coral Goniastrea aspera from the Great Barrier Reef. Galaxea, Journal of Coral Reef Studies, 15 (Special Issue). pp. 154-159.

Salmo, Severino G., Lovelock, Catherine, and Duke, Norman C. (2013) Vegetation and soil characteristics as indicators of restoration trajectories in restored mangroves. Hydrobiologia, 720 (1). pp. 1-18.

Alquezar, Ralph, Glendenning, Lionel, and Costanzo, Simon (2013) The use of the brown macroalgae, Sargassum flavicans, as a potential bioindicator of industrial nutrient enrichment. Marine Pollution Bulletin, 77 (1-2). pp. 140-146.

Baird, Andrew, Sommer, Brigitte, and Madin, Joshua (2012) Pole-ward range expansion of Acropora spp. along the east coast of Australia. Coral Reefs, 31 (4). p. 1063.

Fulton, Christopher J., Starrs, Danswell, Ruibal, Monica P., and Ebner, Brendan C. (2012) Counting crayfish: active searching and baited cameras trump conventional hoop netting in detecting Euastacus armatus. Endangered Species Research, 19 (1). pp. 39-45.

Campbell, Stuart, Cinner, Joshua, Ardiwijaya, Rizya, Pardede, Shinta, Kartawijaya, Tasrif, Mukminin, Ahmad, Herdiana, Yudi, Hoey, Andrew S., Pratchett, Morgan, and Baird, Andrew (2012) Avoiding conflicts and protecting coral reefs: Customary management benefits marine habitats and fish biomass. Oryx, 46 (4). 486-494 .

Rudi, Edi, Campbell, Stuart J., Hoey, Andrew S., Fadli, Nur, Linkie, Matthew, and Baird, Andrew H. (2012) The Coral Triangle Initiative: What are we missing? A case study from Aceh. Oryx, 46 (4). 482-485.

Bellwood, David R., Baird, Andrew H., Depczynski, Martial, González-Cabello, Alonso, Hoey, Andrew S., Lefevre, Carine D., and Tanner, Jennifer K. (2012) Coral recovery may not herald the return of fishes on damaged coral reefs. Oecologia, 170 (2). 1- 7.

Palmer, C. V., Graham, E., and Baird, A. H. (2012) Immunity through early development of coral larvae. Developmental and Comparative Immunology, 38 (2). pp. 395-399.

Fadli, Nur, Campbell, Stuart J., Ferguson, Kathryn, Keyse, Jude, Rudi, Edi, Riedel, Arthur, and Baird, Andrew H. (2012) The role of habitat creation in coral reef conservation: a case study from Aceh, Indonesia. Oryx, 46 (4). pp. 501-507.

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Kuo, Chao-yang, Yuen, Yeong Shyan, Meng, Pei-Jie , Ho, Ping-Ho , Wang, Jih-Terng, Liu, Pi-Jen, Chang, Yang-Chi, Dai, Chang-Feng , Fan, Tung-Yung , Lin, Hsing-Juh, Baird, Andrew Hamilton, and Chen, Chaolun Allen (2012) Recurrent disturbances and the degradation of hard coral communities in Taiwan. PLoS ONE, 7 (8). 44364. e44364- .

Sheaves, Marcus (2012) Ecosystem equivalence and the ability to generalise: insights from global consistencies in mangrove fish assemblages. Marine Ecology Progress Series, 461. pp. 137-149.

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Hazen, Elliott L., Maxwell, Sara M., Bailey, Helen, Bograd, Steven J., Hamann, Mark, Gaspar, Philippe, Godley, Brendan J., and Shillinger, George L. (2012) Ontogeny in marine tagging and tracking science: technologies and data gaps. Marine Ecology-Progress Series, 457. pp. 221-240.

Shillinger, George L., Bailey, Helen, Bograd, Stephen J., Hazen, Elliot L., Hamann, Mark, Gaspar, Philippe, Godley, Brendan J., Wilson, Rory P., and Spotila, James R. (2012) Tagging through the stages: technical and ecological challenges in observing life histories through biologging. Marine Ecology Progress Series, 457. pp. 165-170.

Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., and Jones, Geoffrey P. (2012) Larval export from marine reserves and the recruitment benefit for fish and fisheries. Current Biology, 22 (11). pp. 1023-1028.

Buston, Peter M., Jones, Geoffrey P., Planes, Serge, and Thorrold, Simon R. (2012) Probability of successful larval dispersal declines fivefold over 1 km in a coral reef fish. Proceedings of the Royal Society of London B: Biological Sciences, 279 (1735). pp. 1883-1888.

Hughes, Terry P., Baird, Andrew H., Dinsdale, Elizabeth A., Moltschaniwskyj, Natalie A., Pratchett, Morgan S., Tanner, Jason E., and Willis, Bette L. (2012) Assembly rules of reef corals are flexible along a steep climatic gradient. Current Biology, 22 (8). pp. 736-741.

York, Paul H., Kelaher, Brendan P., Booth, David J., and Bishop, Melanie J. (2012) Trophic responses to nutrient enrichment in a temperate seagrass food chain. Marine Ecology Progress Series, 449. pp. 291-296.

Guest, James, Baird, Andrew, Maynard, Jeffrey, Muttaqin, Efin, Edwards, Alasdair, Campbell, Stuart, Yewdall, Katie, Affendi, Yang Amri, and Chou, Loke Ming (2012) Contrasting Patterns of Coral Bleaching Susceptibility in 2010 Suggest an Adaptive Response to Thermal Stress. PLoS ONE, 7 (3). e33353- .

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Chin, Andrew, White, Jimmy, and Dulvy, Nick K (2012) Aquatic conservation: environment in Queensland at risk. Nature, 490 (7419). p. 176.

Jarvis, Jessie C., Moore, Kenneth, and Kenworthy, W. Judson (2012) Characterization and ecological implication of ­eelgrass life history strategies near the species' southern limit in the western North Atlantic. Marine Ecology Progress Series, 444. pp. 43-56.

Le Port, A., Lavery, S., and Montgomery, J.C. (2012) Conservation of coastal stingrays: seasonal abundance and population structure of the short-tailed stingray Dasyatis brevicaudata at a Marine Protected Area. ICES Journal of Marine Science, 69 (8). pp. 1427-1435.

Murray, Nicholas J., and Fuller, Richard A. (2012) Coordinated effort to maintain East Asian-Australasian flyway. Oryx, 46 (4). pp. 479-480.

Laurance, Susan, Baider, Claudia, Florens, F. B. Vincent, Ramrekha, Shyamduth, Sevathian, Jean-Claude, and Hammond, David S. (2012) Drivers of wetland disturbance and biodiversity impacts on a tropical oceanic island. Biological Conservation, 149 (1). pp. 136-142.

Davis, Benjamin, Johnston, Ross, Baker, Ronnie, and Sheaves, Marcus (2012) Fish utilisation of wetland nurseries with complex hydrological connectivity. PLoS ONE, 7 (11). e49107. pp. 1-11.

Minello, Thomas J., Rozas, Lawrence P., and Baker, Ronald (2012) Geographic variability in salt marsh flooding patterns may affect nursery value for fishery species. Estuaries and Coasts, 35 (2). pp. 501-514.

Sheaves, Marcus, Johnston, Ross, Connolly, Rod M., and Baker, Ronald (2012) Importance of estuarine mangroves to juvenile banana prawns. Estuarine, Coastal and Shelf Science , 114. pp. 208-219.

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Collier, C.J., Waycott, M., and McKenzie, L.J. (2012) Light thresholds derived from seagrass loss in the coastal zone of the northern Great Barrier Reef, Australia. Ecological Indicators, 23. pp. 211-219.

Abrantes, Kátya G., Semmens, Jayson M., Lyle, Jeremy M., and Nichols, Peter D. (2012) Normalisation models for accounting for fat content in stable isotope measurements in salmonid muscle tissue. Marine Biology, 159 (1). pp. 57-64.

Llewelyn, John, Bell, Kris, Schwarzkopf, Lin, Alford, Ross A., and Shine, Richard (2012) Ontogenetic shifts in a prey's chemical defences influence feeding responses of a snake predator. Oecologia, 169 (4). pp. 965-973.

Clark, Nicholas J., and Russ, Garry R. (2012) Ontogenetic shifts in the habitat associations of butterflyfishes (F. Chaetodontidae). Environmental Biology of Fishes, 94 (4). pp. 579-590.

Le Port, Agnès, and Lavery, Shane (2012) Population structure and phylogeography of the short-tailed stingray, Dasyatis brevicaudata (Hutton 1875), in the Southern Hemisphere. Journal of Heredity, 103 (2). pp. 174-185.

Auge, A. A., Moore, A. B., and Chilvers, B. L. (2012) Predicting interactions between recolonising marine mammals and fisheries: defining precautionary management. Fisheries Management and Ecology, 19 (5). pp. 426-433.

Carpenter, Stephen R., Folk, Carl, Norstrom, Albert, Olsson, Olof, Schultz, Lisen, Agarwal, Bina, Balvanera, Patricia, Campbell, Bruce, Carlos Castilla, Juan, Cramer, Wolfgang, DeFries, Ruth, Eyzaguirre, Pablo, Hughes, Terry P., Polasky, Stephen, Sanusi, Zainal, Scholes, Robert, and Spierenburg, Marja (2012) Program on ecosystem change and society: an international research strategy for integrated social-ecological systems. Current Opinion in Environmental Sustainability, 4 (1). pp. 134-138.

Eagle, Janelle V., Baird, Andrew H., Jones, Geoffrey P., and Kingsford, Michael J. (2012) Recruitment hotspots: consistent spatial patterns in the relative abundance of coral recruits at One Tree Island, Australia. Galaxea, Journal of Coral Reef Studies, 14 (1). pp. 5-22.

Wei, Nuwei Vivian, Hsieh, Hernyi Justin, Dai, Chang-Feng, Wallace, Carden C., Baird, Andrew H., and Chen, Chaolun Allen (2012) Reproductive isolation among Acropora Species (Scleractinia: Acroporidae) in a marginal coral assemblage. Zoological Studies, 51 (1). pp. 85-92.

Collier, Catherine J., Waycott, Michelle, and Ospina, Ana Giraldo (2012) Responses of four Indo-West Pacific seagrass species to shading. Marine Pollution Bulletin, 65 (4-9). pp. 342-354.

Caldwell, I.R., and Vincent, A.C.J. (2012) Revisiting two sympatric European seahorse species: apparent decline in the absence of exploitation. Aquatic Conservation: marine and freshwater ecosystems, 22 (4). pp. 427-435.

Guest, J.R., Baird, A.H., Goh, B.P.L., and Chou, L.M. (2012) Sexual systems in scleractinian corals: an unusual pattern in the reef-building species Diploastrea heliopora. Coral Reefs, 31 (3). pp. 705-713.

Dupont, Sam, Moya, Aurélie, and Bailly, Xavier (2012) Stable photosymbiotic relationship under CO2-induced acidification in the acoel worm Symsagittifera roscoffensis. PLoS ONE, 7 (1). e29568. pp. 1-8.

Hsu, Chia-Min, Keshavmurthy, Shashank, Denis, Vianney, Kuo, Chao-Yang, Wang, Jih-Terng, Meng, Pei-Jie, and Chen, Chaolun Allen (2012) Temporal and Spatial Variations in spatial variations in symbiont communities of catch bowl coral Isopora palifera (Scleractinia: Acroporidae) on reefs in Kenting National Park, Taiwan. Zoological Studies, 51 (8). pp. 1343-1353.

Palmer, C.V., and Traylor-Knowles, N. (2012) Towards an integrated network of coral immune mechanisms. Proceedings of the Royal Society of London Series B, Biological Sciences, 279 (1745). pp. 4106-4114.

Davis, Aaron M., Pusey, Bradley, and Pearson, Richard G. (2012) Trophic ecology of terapontid fishes (Pisces: Terapontidae): the role of morphology and ontogeny. Marine and Freshwater Research, 63 (2). pp. 128-141.

Broadhurst, B.T. , Ebner, B.C., and Clear, R.C. (2012) A rock-ramp fishway expands nursery grounds of the endangered Macquarie perch (Macquaria australasica). Australian Journal of Zoology, 60 (2). pp. 91-100.

Clague, Gillian E., Cheney, Karen L., Goldizen, Anne W., McCormick, Mark I., Waldie, Peter A., and Grutter, Alexandra S. (2011) Long-term cleaner fish presence affects growth of a coral reef fish. Biology Letters, 7 (6). pp. 863-865.

Guerra-Castro, E., Cruz-Motta, J.J., and Conde, J.E. (2011) Quantitative analisys of fouling diversity associated with roots of Rhizophora mangle L. in La Restinga Lagoon National Park. Interciencia, 36 (12). pp. 923-930.

Lukoschek, Vimoksalehi, Osterhage, Jennifer L., Karns, Daryl R., Murphy, John C., and Voris, Harold K. (2011) Phylogeography of the Mekong mud snake (Enhydris subtaeniata): the biogeographic importance of dynamic river drainages and fluctuating sea levels for semiaquatic taxa in Indochina. Ecology and Evolution, 1 (3). pp. 330-342.

Sutaria, Dipani, and Marsh, Helene (2011) Abundance estimates of Irrawaddy dolphins in Chilika Lagoon, India, using photo-identification based mark-recapture methods. Marine Mammal Science, 27 (4). E338-E348.

Kool, Johnathan T., Paris, Claire B., Barber, Paul H., and Cowen, Robert K. (2011) Connectivity and the development of population genetic structure in Indo-West Pacific coral reef communities. Global Ecology and Biogeography, 20 (5). pp. 695-706.

Johansen, J.L., and Jones, G.P. (2011) Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17 (9). pp. 2971-2979.

Ma, Ka Yan, Chan, Tin-Yam, and Chu, Ka Hau (2011) Refuting the six-genus classification of Penaeus s.l. (Dendrobranchiata, Penaeidae): a combined analysis of mitochondrial and nuclear genes. Zoologica Scipta, 40 (5). pp. 498-508.

Prado, Patricia, Collier, Catherine J., Romero, Javier, and Alcoverro, Teresa (2011) Distinctive types of leaf tissue damage influence nutrient supply to growing tissues within seagrass shoots. Marine Biology, 158 (7). pp. 1473-1482.

Barnett, Adam, Abrantes, Kátya G., Stevens, John D., and Semmens, Jayson M. (2011) Site fidelity and sex-specific migration in a mobile apex predator: implications for conservation and ecosystem dynamics. Animal Behaviour, 81 (5). pp. 1039-1048.

Grech, Alana, Sheppard, James, and Marsh, Helene (2011) Informing species conservation at multiple scales using data collected for marine mammal stock assessments. PLoS ONE, 6 (3). e17993. pp. 1-8.

Le Grand, Helen M, and Fabricius, Katharina (2011) Relationship of internal macrobioeroder densities in living massive Porites to turbidity and chlorophyll on the Australian Great Barrier Reef. Coral Reefs, 30 (1). pp. 97-107.

Duke, N.C., and Ge, X.-J. (2011) Bruguiera (Rhizophoraceae) in the Indo-West Pacific: a morphometric assessment of hybridization within single-flowered taxa. Blumea, 56 (1). pp. 36-48.

Abrantes, Kátya Gisela, Lyle, Jeremy Martin, Nichols, Peter D., and Semmens, Jayson Mark (2011) Do exotic salmonids feed on native fauna after escaping from aquaculture cages in Tasmania, Australia? Canadian Journal of Fisheries and Aquatic Sciences, 68 (9). pp. 1539-1551.

Keith, Sally, Herbert, Roger J.H., Norton, Paul A., Hawkins, Stephen J., and Newton, Adrian C. (2011) Individualistic species limitations of climate-induced range expansions generated by meso-scale dispersal barriers. Diversity and Distributions, 17 (2). pp. 275-286.

Abrantes, Kátya G., and Barnett, Adam (2011) Intrapopulation variations in diet and habitat use in a marine apex predator, the broadnose sevengill shark Notorynchus cepedianus. Marine Ecology Progress Series, 442. pp. 133-148.

Sparks, Tim H., Butchart, Stuart H.M., Balmford, Andrew, Bennun, Leon, Stanwell-Smith, Damon, Walpole, Matt, Bates, Nicholas R., Bomhard, Bastian, Buchanan, Graeme M., Chenery, Anna M., Collen, Ben, Csirke, Jorge, Diaz, Robert J., Dulvy, Nicholas K., Fitzgerald, Claire, Kapos, Valerie, Mayaux, Philippe, Tierney, Megan, Waycott, Michelle, Wood, Louisa, and Green, Rhys E. (2011) Linked indicator sets for addressing biodiversity loss. Oryx, 45 (3). pp. 411-419.

Mackenzie, Jock, Duke, Norman, Baba, Karin, Wood, Apanie, Rogers, Britt, Haller, Alex, and O'Mara, Julian (2011) MangroveWatch Burnett Mary region is one year old: outcomes and lessons learned. Wetlands Australia, National Wetlands Update, 19. pp. 26-27.

Zhou, Renchao, Ling, Shaoping, Zhao, Wenming, Osada, Naoki, Chen, Sufang, Zhang, Meng, He, Ziwen, Bao, Hua, Zhong, Cairong, Zhang, Bing, Lu, Xuemei, Turissini, David, Duke, Norman C., Lu, Jian, Shi, Suhua, and Wu, Chung-I (2011) Population genetics in nonmodel organisms: II. natural selection in marginal habitats revealed by deep sequencing on dual platforms. Molecular Biology and Evolution, 28 (10). pp. 2833-2842.

Silva, Catarina NS, Broadhurst, Matt K., Schwingel, Andréia, Dias, José H., Cattani, André P., and Spach, Henry L. (2011) Refining a Nordmøre-grid for a Brazilian artisanal penaeid-trawl fishery. Fisheries Research, 109 (1). pp. 168-178.

Baker, Ronald, and Minello, Thomas J. (2011) Trade-offs between gear selectivity and logistics when sampling nekton from shallow open water habitats: a gear comparison study. Gulf and Caribbean Research, 23. pp. 37-48.

Magurran, Anne, and Dornelas, Maria (2010) Biological diversity in a changing world: introduction. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1558). pp. 3593-3597.

Barbosa, M., Dornelas, M., and Magurran, A.E. (2010) Effects of polyandry on male phenotypic diversity. Journal of Evolutionary Biology, 23 (11). pp. 2442-2452.

Dale, Patricia E.R., Dale, Michael B., Dowe, David L., Knight, Jon M., Lemckert, Charles J., Low Choy, Darryl C., Sheaves, Marcus J., and Sporne, Ilva (2010) A conceptual model for integrating physical geography research and coastal wetland management, with an Australian example. Progress in Physical Geography, 34 (5). pp. 605-624.

Campbell, Hamish A., Watts, Matthew E., Sullivan, Scott, Read, Mark A., Choukroun, Severine, Irwin, Steve R., and Franklin, Craig E. (2010) Estuarine crocodiles ride surface currents to facilitate long-distance travel. Journal of Animal Ecology, 79 (5). pp. 955-964.

Abrantes, Kátya Gisela, and Sheaves, Marcus (2010) Importance of freshwater flow in terrestrial–aquatic energetic connectivity in intermittently connected estuaries of tropical Australia. Marine Biology, 157 (9). pp. 2071-2086.

Sheaves, Marcus, Johnston, Ross, and Connolly, Rod M. (2010) Temporal dynamics of fish assemblages of natural and artificial tropical estuaries. Marine Ecology Progress Series, 410. pp. 143-157.

Hutchinson, N., and Rhodes, K.L. (2010) Home range estimates for squaretail coralgrouper, Plectropomus areolatus (Rüppell 1830). Coral Reefs, 29 (2). pp. 511-519.

Karns, Daryl R., Lukoschek, Vimoksalehi, Osterhage, Jennifer, Murphy, John C., and Voris, Harold K. (2010) Phylogeny and biogeography of the Enhydris clade (Serpentes: Homalopsidae). Zootaxa, 2452. pp. 18-30.

Sheaves, Marcus, and Johnston, Ross (2010) Implications of spatial variability of fish assemblages for monitoring of Australia’s tropical estuaries. Aquatic Conservation: marine and freshwater ecosystems , 20 (3). pp. 348-356.

Polidoro, Beth A., Carpenter, Kent E., Collins, Lorna, Duke, Norman C., Ellison, Aaron M., Ellison, Joanna C., Farnsworth, Elizabeth J., Fernando, Edwino S., Kathiresan, Kandasamy, Koedam, Nico E., Livingstone, Suzanne, Miyagi, Toyohiko, Moore, Gregg E., Nam, Vien Ngoc, Ong, Jin Eong, Primavera, Jurgenne H., Salmo, Severino G., Sanciangco, Jonnell C., Sukardjo, Sukristijono, Wang, Yamin, and Hong Yong, Jean Wan (2010) The loss of species: mangrove extinction risk and geographic areas of global concern. PLoS ONE, 5 (4). e10095. pp. 1-10.

Evangelista, Carla, Mills, Morena, Siebeck, Ulrike E., and Collin, Shaun P. (2010) A comparison of the external morphology of the membranous inner ear in elasmobranchs. Journal of Morphology, 271 (4). pp. 483-495.

Van Dijk, Jent Kornelis, and van Tussenbroek, Brigitta I. (2010) Clonal diversity and structure related to habitat of the marine angiosperm Thalassia testudinum along the Atlantic coast of Mexico. Aquatic Botany, 92 (1). pp. 63-69.

Siebert, S.J., Zobolo, A.M., and Dowe, J.L. (2010) Arecaceae. Bothalia, 40 (1). pp. 55-57.

Lach, Lori, Tillberg, Chadwick V., and Suarez, Andrew V. (2010) Contrasting effects of an invasive ant on a native and an invasive plant. Biological Invasions, 12 (9). pp. 3123-3133.

Kovacs, Carolyn J., Daskin, Joshua H., Patterson, Heather, and Carmichael, Ruth H. (2010) Crassostrea virginica shells record local variation in wastewater inputs to a coastal estuary. Aquatic Biology, 9 (1). pp. 77-84.

Dornelas, Maria (2010) Disturbance and change in biodiversity. Philosophical Transactions of the Royal Society B, 365 (1558). pp. 3719-3727.

Duke, N.C. (2010) Overlap of eastern and western mangroves in the South-western Pacific: hybridization of all three Rhizophora (Rhizophoraceae) combinations in New Caledonia. Blumea, 55 (2). pp. 171-188.

Adjeroud, M., Fernandez, J.M., Carroll, A.G., Harrison, P.L., and Penin, L. (2010) Spatial patterns and recruitment processes of coral assemblages among contrasting environmental conditions in the southwestern lagoon of New Caledonia. Marine Pollution Bulletin, 61 (7-12). pp. 375-386.

Abrantes, Kátya, and Sheaves, Marcus (2010) Use of a δ13C–δ15N relationship to determine animal trophic positions in a tropical Australian estuarine wetland. Austral Ecology, 35 (1). pp. 96-103.

Moore, Kenneth A., Shields, Erin C., and Jarvis, Jessie C. (2010) The role of habitat and herbivory on the restoration of tidal freshwater submerged aquatic vegetation populations. Restoration Ecology, 18 (4). pp. 596-604.

Jarvis, Jessie C., and Moore, Kenneth A. (2010) The role of seedlings and seed bank viability in the recovery of Chesapeake Bay, USA, Zostera marina populations following a large-scale decline. Hydrobiologia, 649 (1). pp. 55-68.

Gusmão, Luiz Felipe Mendes, and McKinnon, A. David (2009) The effect of food type and quantity on egg production and nucleic acid content of Acartia sinjiensis. Aquaculture, 296 (1-2). pp. 71-80.

McMahon, K.M., and Waycott, M. (2009) New record for Halophila decipiens Ostenfeld in Kenya based on morphological and molecular evidence. Aquatic Botany, 91 (4). pp. 318-320.

Paton, D.C., Rogers, D.J., Hill, B.M., Bailey, C.P., and Ziembicki, M. (2009) Temporal changes to spatially stratified waterbird communities of the Coorong, South Australia: implications for the management of heterogenous wetlands. Animal Conservation, 12 (5). pp. 408-417.

Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Waycott, Michelle, Duarte, Carlos M., Carruthers, Tim J.B., Orth, Robert J., Dennison, William C., Olyarnik, Suzanne, Calladine, Ainsley, Fourqurean, James W., Heck Jr., Kenneth L., Hughes, A. Randall, Kendrick, Gary A., Kenworthy, W. Judson, Short, Frederick T, and Williams, Susan L. (2009) Accelerating loss of seagrasses across the globe threatens coastal ecosystems. Proceedings of the National Academy of Sciences, 106 (30). pp. 12377-12381.

Hughes, A. Randall, Williams, Susan L., Duarte, Carlos M., Heck Jr, Kenneth L., and Waycott, Michelle (2009) Associations of concern: declining seagrasses and threatened dependent species. Frontiers in Ecology and the Environment, 7 (5). pp. 242-246.

Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.

Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.

Clements, Kendall D., Raubenheimer, David, and Choat, J. Howard (2009) Nutritional ecology of marine herbivorous fishes: ten years on. Functional Ecology, 23 (1). pp. 79-92.

Dowe, John Leslie (2009) Archontophoenix (Arecaceae) description of species and notes. The Palm Journal, 192. pp. 4-11.

Griffith, M. Patrick, Dowe, John L., Noblick, Larry R., and Danielson, I. Laurie (2009) Archontophoenix at Montgomery Botanical Center. The Palm Journal, 192. pp. 12-14.

Sheaves, Marcus (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Marine Ecology Progress Series, 391. pp. 107-115.

Dowe, J.L. (2009) A taxonomic account of Livistona R.Br. (Arecaceae). Garden's Bulletin Singapore, 60 (2). pp. 185-344.

Prebble, M., and Dowe, J.L. (2008) The late Quaternary decline and extinction of palms on oceanic Pacific islands. Quaternary Science Reviews, 27 (27). pp. 2546-2567.

Carlson, John K., Heupel, Michelle R., Bethea, Dana M., and Hollensead, Lisa D. (2008) Coastal habitat use and residency of juvenile Atlantic sharpnose sharks (Rhizoprionodon terraenovae). Estuaries and Coasts, 31 (5). pp. 931-940.

Horne, John B., van Herwerden, Lynne, Choat, J. Howard, and Robertson, D.R. (2008) High population connectivity across the Indo-Pacific: congruent lack of phylogeographic structure in three reef fish congeners. Molecular Phylogenetics and Evolution, 49 (2). pp. 629-638.

Pike, David A. (2008) Environmental correlates of nesting in loggerhead turtles, Caretta caretta. Animal Behaviour, 76 (3). pp. 603-610.

Ettinger-Epstein, Piers, and Kingsford, Michael J. (2008) Effects of the El Nino southern oscillation on Turbo torquatus (Gastropoda) and their kelp habitat. Austral Ecology, 33 (5). pp. 594-606.

Cannicci, Stefano, Burrows, Damien, Fratini, Sara, Smith III, Thomas J., Offenberg, Joachim, and Dahdouh-Guebas, Farid (2008) Faunal impact on vegetation structure and ecosystem function in mangrove forests: a review. Aquatic Botany, 89 (2). pp. 189-200.

VanDerWal, Jeremy, Murphy, Helen T., and Lovett-Doust, Jon (2008) Three-dimensional mid-domain predictions: geometric constraints in North American amphibian, bird, mammal and tree species richness patterns. Ecography, 31 (4). pp. 435-449.

Yeiser, B.G., Heupel, M.R., and Simpfendorfer, C.A. (2008) Occurrence, home range and movement patterns of juvenile bull (Carcharhinus leucas) and lemon (Negaprion brevirostris) sharks within a Florida estuary. Marine and Freshwater Research, 59 (6). pp. 489-501.

Grech, A., and Marsh, H. (2008) Rapid assessment of risks to a mobile marine mammal in an ecosystem-scale marine protected area. Conservation Biology, 22 (3). pp. 711-720.

Le Port, Agnès, Sippel, Tim, and Montgomery, John C. (2008) Observations of mesoscale movements in the short-tailed stingray, Dasyatis brevicaudata from New Zealand using a novel PSAT tag attachment method. Journal of Experimental Marine Biology and Ecology, 359 (2). pp. 110-117.

Figueiredo, Joana, Penha-Lopes, Gil, Anto, Justin, Narciso, Luís, and Lin, Junda (2008) Fecundity, brood loss and egg development through embryogenesis of Armases cinereum (Decapoda: Grapsidae). Marine Biology, 154 (2). pp. 287-294.

Rayner, Thomas S., Pusey, Bradley J., and Pearson, Richard G. (2008) Seasonal flooding, instream habitat structure and fish assemblages in the Mulgrave River, north-east Queensland: towards a new conceptual framework for understanding fish-habitat dynamics in small tropical rivers. Marine and Freshwater Research, 59 (2). pp. 97-116.

Rummer, J.L., and Brauner, C.J. (2008) Beyond buoyancy and vision: the potential for the Root effect to deliver oxygen to tissues other than the swim bladder and eye. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 150 (Suppl 3). S52-S53.

Alieva, Naila O., Konzen, Karen A., Field, Steven F., Meleshkevitch, Ella A., Hunt, Marguerite E., Beltran Ramirez, Victor, Miller, David J., Wiedenmann, Jorg, Salih, Anya, and Matz, Mikhail V. (2008) Diversity and evolution of coral fluorescent proteins. Public Library of Science ONE , 3 (7). pp. 1-12.

Moore, Kenneth A., and Jarvis, Jessie C. (2008) Environmental factors affecting recent summertime eelgrass diebacks in the lower Chesapeake Bay: implications for long-term persistence. Journal of Coastal Research, Special Issue 55. pp. 135-147.

Simpfendorfer, C. A., Poulakis, G. R., O'Donnell, P. M, and Wiley, T. R. (2008) Growth rates of juvenile smalltooth sawfish Pristis pectinata Latham in the western Atlantic. Journal of Fish Biology, 72 (3). pp. 711-723.

Rowe, Cassandra (2008) Holocene vegetation change on Mua. Memoirs of the Queensland Museum, Cultural Heritage Series, 4 (2). pp. 469-480.

Jarvis, Jessie C., and Moore, Kenneth A. (2008) Influence of environmental factors on Vallisneria americana seed germination. Aquatic Botany, 88 (4). pp. 283-294.

Pitt, Kylie A., Kingsford, Michael, Rissik, David, and Koop, Klaus (2007) Jellyfish modify the response of planktonic assemblages to nutrient pulses. Marine Ecology Progress Series, 351. pp. 1-13.

Rowe, Cassandra (2007) Vegetation change following mid-Holocene marine transgression of the Torres Strait shelf: a record from the island of Mua, northern Australia. Holocene, 17 (7). pp. 927-937.

Schwarzkopf, L., and Alford, R.A. (2007) Acoustic attractants enhance trapping success for cane toads. Wildlife Research, 34 (5). pp. 366-370.

Sherbrooke, Wade C., Scardino, Andrew J., de Nys, Rocky, and Schwarzkopf, Lin (2007) Functional morphology of scale hinges used to transport water: convergent drinking adaptations in desert lizards (Moloch horridus and Phrynosoma cornutum). Zoomorphology, 126 (2). pp. 89-102.

Harvey, Mark S., and Volschenk, Erich S. (2007) A review of some Australasian Chernetidae: Sundochernes, Troglochernes and a new genus (Pseudoscorpiones). Journal of Arachnology, 35 (2). pp. 238-277.

Duke, N.C., Meynecke, J.-O., Dittmann, S., Ellison, A.M., Anger, K., Berger, U., Cannicci, S., Diele, K., Ewel, K.C., Field, C.D., Koedam, N., Lee, S.Y., Marchand, C., Nordhaus, I., and Dahdouh-Guebas, F. (2007) A world without mangroves? Science, 317. pp. 41-42.

Campbell, Stuart, McKenzie, Len J., Kerville, Simon P., and Bite, Juanita S. (2007) Patterns in tropical seagrass photosynthesis in relation to light, depth and habitat. Estuarine, Coastal and Shelf Science, 73 (3-4). pp. 551-562.

Valentine, Leonie E., Schwarzkopf, Lin, Johnson, Christopher N., and Grice, Anthony C. (2007) Burning season influences the response of bird assemblages to fire in tropical savannas. Biological Conservation, 137 (1). pp. 90-101.

Valentine, Leonie E., Roberts, Brady, and Schwarzkopf, Lin (2007) Mechanisms driving avoidance of non-native plants by lizards. Journal of Applied Ecology, 44 (1). pp. 228-237.

Hodgson, Amanda J., and Marsh, Helene (2007) Response of dugongs to boat traffic: the risk of disturbance and displacement. Journal of Experimental Marine Biology and Ecology, 340 (1). pp. 50-61.

Van Dijk, Jent Kornelis, Waycott, Michelle, van Tussenbroek, Brigitta I., and Ouborg, Joop (2007) Polymorphic microsatellite markers for the Caribbean seagrass Thalassia testudinum Banks ex König. Molecular Ecology Notes, 7 (1). pp. 89-91.

Wiley, Tonya R., and Simpfendorfer, Colin A. (2007) The ecology of elasmobranchs occurring in the Everglades National Park, Florida: implications for conservation and management. Bulletin of Marine Science, 80 (1). pp. 171-189.

Kelaher, Brendan P., Castilla, Juan Carlos, Prado, Luis, York, Paul, Schwindt, Evangelina, and Bortolus, Alejandro (2007) Spatial variation in molluscan assemblages from coralline turfs of Argentinean Patagonia. Journal of Molluscan Studies, 73 (2). pp. 139-146.

Bishop, Melanie J., Kelaher, Brendan P., Alquezar, Ralph, York, Paul H., Ralph, Peter J., and Skilbeck, C. Greg (2007) Trophic cul-de-sac, Pyrazus ebeninus, limits trophic transfer through an estuarine detritus-based food web. Oikos, 116 (3). pp. 427-438.

Hazel, Julia, Lawler, Ivan R ., Marsh, Helene, and Robson, Simon (2007) Vessel speed increases collision risk for the green turtle Chelonia mydas. Endangered Species Research, 3 (2). pp. 105-113.

Grant, Lauryne J., Sluys, Ronald, and Blair, David (2006) Biodiversity of Australian freshwater planarians (Platyhelminthes: Tricladida: Paludicola): new species and localities, and a review of paludicolan distribution in Australia. Systematics and Biodiversity, 4 (4). pp. 435-471.

Hamann, Mark, Schäuble, Chloe S., Simons, Tom, and Evans, Sammy (2006) Demographic and health parameters of green sea turtles Chelonia mydas foraging in the Gulf of Carpentaria, Australia. Endangered Species Research, 2. pp. 81-88.

Hamann, Mark, Schauble, Chloe, Simon, Tom, Johnson, Johnny, Evans, Sammy, Dorr, Tony, and Kennett, Rod (2006) Sea turtles nesting in the Sir Edward Pellew Islands, Gulf of Carpentaria, Northern Territory. Memoirs of the Queensland Museum, 52 (1). pp. 71-78.

Sewell, Kim B., Cannon, Lester R.G., and Blair, David (2006) A review of Temnohaswellia and Temnosewellia (Platyhelminthes: Temnocephalida: Temnocephalidae), ectosymbionts from Australian crayfish Euastacus (Parastacidae). Memoirs of the Queensland Museum, 52 (1). pp. 199-279.

Sheaves, Marcus (2006) Is the timing of spawning in sparid fishes a response to sea temperature regimes? Coral Reefs, 25 (4). pp. 655-669.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Consequences of inappropriate criteria for accepting age estimates from otoliths, with a case study for a long-lived tropical reef fish. Canadian Journal of Fisheries and Aquatic Sciences, 63 (10). pp. 2259-2274.

Hamann, Mark, Cuong, Chu The, Hong, Nguyen Duy, Thuoc, Pham, and Thu Hien, Bui Thi (2006) Distribution and abundance of marine turtles in the Socialist Republic of Viet Nam. Biodiversity and Conservation, 15 (11). pp. 3703-3720.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Geographic influences on and the accuracy and precision of age estimates for the red bass, Lutjanus bohar (Forsskal 1775): a large tropical reef fish. Fisheries Research, 80 (2-3). pp. 322-328.

Choat, J.H., Davies, C.R., Ackerman, J.L., and Mapstone, B.D. (2006) Age structure and growth in a large teleost, Cheilinus undulatus, with a review of size distribution in labrid fishes. Marine Ecology Progress Series, 318. pp. 237-246.

Sheaves, Marcus, Baker, Ronnie, and Johnston, Ross (2006) Marine nurseries and effective juvenile habitats: an alternative view. Marine Ecology Progress Series , 318. pp. 303-306.

van Tussenbroek, Brigitta I., Barba Santos, M. Guadalupe, and van Dijk, Jent Kornelis (2006) Unusual synchronous spawning by green algae (Bryopsidales), after the passage of Hurricane Wilma (2005). Botanica Marina, 49 (3). pp. 270-271.

Mahony, Michael, Donnellan, Stephen C., Richards, Stephen J., and McDonald, Keith (2006) Species boundaries among barred river frogs, Mixophyes (Anura: Myobatrachidae) in north-eastern Australia, with descriptions of two new species. Zootaxa, 1228. pp. 35-60.

Sheaves, Marcus (2006) Scale-dependent variation in composition of fish fauna among sandy tropical estuarine embayments. Marine Ecology Progress Series, 310. pp. 173-184.

Rummer, J.L., Regan, M., and Brauner, C.J. (2006) Characterization of the hemoglobin and red blood cell system in the copper rockfish, Sebastes caurinus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 143 (Suppl 4). S74-S74.

Munday, Philip L., Buston, Peter M., and Warner, Robert R. (2006) Diversity and flexibility of sex-change strategies in animals. Trends in Ecology and Evolution, 21 (2). pp. 89-95.

Roberts, David, and Poore, Alistair (2006) Habitat configuration affects colonisation of epifauna in a marine algal bed. Biological Conservation, 127 (1). pp. 18-26.

York, P.H., Booth, D.J., Glasby, T.M., and Pease, B.C. (2006) Fish assemblages in habitats dominated by Caulerpa taxifolia and native seagrasses in south-eastern Australia. Marine Ecology Progress Series, 312. pp. 223-234.

Hazel, Julia, and Gyuris, Emma (2006) Vessel-related mortality of sea turtles in Queensland, Australia. Wildlife Research, 33 (2). pp. 149-154.

Rowe, Cassandra (2006) A holocene history of vegetation change in the western Torres Strait region, Queensland, Australia. Quaternary Australasia, 24 (1). pp. 14-15.

Dowe, John Leslie (2005) Observations of palms made by the botanist and explorer Ludwig Leichhardt, during the Australian Overland Expedition of 1844-1845. Palms, 49 (4). pp. 167-182.

Kintner, Anna H., Seymour, Jamie E., and Edwards, Susan L. (2005) Variation in lethality and effects of two Australian chirodropid jellyfish venoms in fish. Toxicon, 46 (6). pp. 699-708.

Wong, Marian Y.L., Munday, Philip L., and Jones, Geoffrey P. (2005) Habitat patch size, facultative monogamy and sex change in a coral-dwelling fish, Caracanthus unipinna. Environmental Biology of Fishes, 74 (2). pp. 141-150.

Kroon, Frederiecke J., Munday, Philip L., Westcott, David A., Hobbs, Jean-Paul A., and Liley, N. Robin (2005) Aromatase pathway mediates sex change in each direction. Proceedings of the Royal Society of London Series B, Biological Sciences, 272 (1570). pp. 1399-1405.

Wittenrich, Matthew L., and Munday, Philip L. (2005) Bi-directional sex change in coral reef fishes from the family Pseudochromidae: an experimental evaluation. Zoological Science, 22 (7). pp. 797-803.

Beasley, Isabel, Robertson, Kelly M., and Arnold, Peter (2005) Description of a new dolphin, the Australian snubfin dolphin Orcaella heinsohni sp. N. (cetacea, delphinidae). Marine Mammal Science, 21 (3). pp. 365-400.

Scott, Graham R., Claiborne, James B., Edwards, Susan L., Schulte, Patricia M., and Wood, Chris M. (2005) Gene expression after freshwater transfer in gills and opercular epithelia of killifish: insight into divergent mechanisms of ion transport. Journal of Experimental Biology, 208 (14). pp. 2719-2729.

Baird, Ian G., and Beasley, Isabel L. (2005) Irrawaddy dolphin Orcaella brevirostris in the Cambodian Mekong River: an initial survey. Oryx, 39 (3). pp. 301-310.

Edwards, Susan L., Wall, Brian P., Morrison-Shetlar, Alison, Sligh, Samuel, Weakly, Jill C., and Claiborne, James B. (2005) The effect of environmental hypercapnia and salinity on the expression of NHE-like isoforms in the gills of a euryhaline fish (Fundulus heteroclitus). Journal of Experimental Zoology, Part A, 303A (6). pp. 464-475.

Hernaman, V., and Munday, P.L. (2005) Life-history characteristics of coral reef gobies. I. Growth and life-span. Marine Ecology Progress Series, 290. pp. 207-221.

Hernaman, V., and Munday, P.L. (2005) Life-history characteristics of coral reef gobies. II. Mortality rate, mating system and timing of maturation. Marine Ecology Progress Series, 290. pp. 223-237.

Pelis, Ryan M., Edwards, Susan L., Kunigelis, Stan C., Claiborne, James B., and Renfro, J. Larry (2005) Stimulation of renal sulfate secretion by metabolic acidosis requires Na+/H+ exchange induction and carbonic anhydrase. American Journal of Physiology: renal physiology, 289 (3). pp. 208-216.

Flores, Augusto A.V., Abrantes, Katya G., and Paula, José (2005) Estimating abundance and spatial distribution patterns of the bubble crab Dotilla fenestrata (Crustacea: Brachyura). Austral Ecology, 30 (1). pp. 14-23.

McMahon, Kathryn, Bengston-Nash, Susan, Eaglesham, Geoff, Müller, Jochen F., Duke, Norman C., and Winderlich, Steve (2005) Herbicide contamination and the potential impact to seagrass meadows in Hervey Bay, Queensland, Australia. Marine Pollution Bulletin, 51 (1-4). pp. 325-334.

Chilvers, B.L., Lawler, I.R., Macknight, F., Marsh, H., Noad, M., and Paterson, R. (2005) Moreton Bay, Queensland, Australia : an example of the co-existence of significant marine mammal populations and large-scale coastal development. Biological Conservation, 122 (4). pp. 559-571.

Johnson, Megan L., and Speare, Richard (2005) Possible modes of dissemination of the amphibian chytrid Batrachochytrium dendrobatidis in the environment. Diseases of Aquatic Organisms, 65 (3). pp. 181-186.

Mellors, Jane, Waycott, Michelle, and Marsh, Helene (2005) Variation in biogeochemical parameters across intertidal seagrass meadows in the central Great Barrier Reef region. Marine Pollution Bulletin, 51 (1). pp. 335-342.

Schaffelke, Britta, Mellors, Jane, and Duke, Norman C. (2005) Water quality in the Great Barrier Reef region: responses of mangrove, seagrass and macroalgal communities. Marine Pollution Bulletin, 51 (1-4). pp. 279-296.

Barfod, Anders S., and Dowe, John Leslie (2005) The enigmatic Australian fan-palm Licuala ramsayi. Palms, 49 (1). pp. 15-23.

Hobbs, Jean-Paul A., Munday, Philip L., and Jones, Geoffrey P. (2004) Social induction of maturation and sex determination in a coral reef fish. Proceedings of the Royal Society of London Series B: biological sciences, 271 (1553). pp. 2109-2114.

Munday, Philip L. (2004) Habitat loss, resource specialization, and extinction on coral reefs. Global Change Biology, 10 (10). pp. 1642-1647.

Hobbs, J.-P., and Munday, P.L. (2004) Intraspecific competition controls spatial distribution and social organisation of the coral-dwelling goby Gobiodon histrio. Marine Ecology Progress Series, 278. pp. 253-259.

Marantelli, Gerry, Berger, Lee, Speare, Rick, and Keegan, Leigh (2004) Distribution of the amphibian chytrid Batrachochytrium dendrobatidis and keratin during tadpole development. Pacific Conservation Biology, 10 (3). pp. 173-179.

Dowe, John L., and Mogea, Johanis P. (2004) New species of Livistona (Arecaceae) from New Guinea. Palms, 48 (4). pp. 197-203.

Corkeron, Peter. J., and Martin, Anthony R. (2004) Ranging and diving behaviour of two 'offshore' bottlenose dolphins, Tursiops sp., off eastern Australia. Journal of the Marine Biological Association of the United Kingdom, 84 (2). pp. 465-468.

Rasheed, Michael (2004) Recovery and succession in a multi-species tropical seagrass meadow following experimental disturbance: the role of sexual and asexual reproduction. Journal of Experimental Marine Biology and Ecology, 310 (1). pp. 13-45.

Brodie, Gilianne D. (2004) An unusual dendrodorid: redescription of the tropical nudibranch Dendrodoris atromaculata (Adler & Hancock, 1864) (Anthobranchia: Doridoidea: Dendrodorididae). Zootaxa, 503. pp. 1-13.

André, Jessica, and Lawler, Ivan R. (2003) Near infrared spectroscopy as a rapid and inexpensive means of dietary analysis for a marine herbivore, dugong Dugong dugon. Marine Ecology Progress Series, 257. pp. 259-266.

Cabral, Henrique, Catarino, Ana Isabel, Figueiredo, Joana, Garcia, Joana, and Henriques, Miguel (2003) Feeding ecology, age, growth and sexual cycle of the Portuguese sole, Synaptura lusitanica. Journal of the Marine Biological Association of the United Kingdom, 83 (3). pp. 613-618.

Fisher, R., and Sheaves, M.J. (2003) Community structure and spatial variability of marine nematodes in tropical Australian pioneer seagrass meadows. Hydrobiologia, 495 (1-3). pp. 143-158.

Cabral, Henrique N., Marques, Joana F., Rego, Ana Luisa, Catarino, Ana Isabel, Figueiredo, Joana, and Garcia, Joana (2003) Genetic and morphological variation of Synaptura lusitanica Capello, 1868, along the Portuguese coast. Journal of Sea Research, 50 (2-3). pp. 167-175.

Chilvers, B. Louise, Corkeron, Peter J., and Puotinen, Marji L. (2003) Influence of trawling on the behaviour and spatial distribution of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Moreton Bay, Australia. Canadian Journal of Zoology, 81 (12). pp. 1947-1955.

Macia, A, Abrantes, K.G.S., and Paula, J. (2003) Thorn fish Terapon jarbua (Forskål) predation on juvenile white shrimp Penaeus indicus H. Milne Edwards and brown shrimp Metapenaeus monoceros (Fabricius): the effect of turbidity, prey density, substrate type and pneumatophore density. Journal of Experimental Marine Biology and Ecology, 291 (1). pp. 29-56.

Duke, Norman C. (2002) Sustained high levels of foliar herbivory of the mangrove Rhizophora stylosa by a moth larva Doratifera stenosa (Limacodidae) in north-eastern Australia. Wetlands Ecology and Management, 10 (5). pp. 403-419.

Thompson, A.A., and Mapstone, B.D. (2002) Intra- versus inter-annual variation in counts of reef fishes and interpretations of long-term monitoring studies. Marine Ecology Progress Series, 232. pp. 247-257.

Duke, Norman C., Lo, Eugenia Yuk Ying, and Sun, Mei (2002) Global distribution and genetic discontinuities of mangroves: emerging patterns in the evolution of Rhizophora. Trees, 16 (2). pp. 65-79.

Kritzer, Jacob P. (2002) Stock structure, mortality and growth of the decorated goby, Istigobius decoratus (Gobiidae), at Lizard Island, Great Barrier Reef. Environmental Biology of Fishes, 63 (2). pp. 211-216.

Parra Vergara, Guido J., Azuma, Chieko, Preen, Anthony R., Corkeron, Peter J., and Marsh, Helene (2002) Distribution of Irrawaddy dolphins, Orcaella brevirostris, in Australian waters. Raffles Bulletin of Zoology, Supplement 10. pp. 141-154.

Limpus, Colin J., Limpus, Duncan J., and Hamann, Mark (2002) Freshwater turtle population in the area to be flooded by the Walla Weir, Burnett River, Queensland: baseline study. Memoirs of the Queensland Museum, 48 (1). pp. 155-168.

Sheaves, Marcus (2001) Are there really few piscivorous fishes in shallow estuarine habitats? Marine Ecology-Progress Series, 222. pp. 279-290.

Wilson, Shaun K., Burns, Kathryn, and Codi, Susan (2001) Sources of dietary lipids in the coral reef blenny Salarias patzneri. Marine Ecology-Progress Series, 222. pp. 291-296.

Bay, L.K., Jones, G.P., and McCormick, M.I. (2001) Habitat selection and aggression as determinants of spatial segregation among damselfish on a coral reef. Coral Reefs, 20 (3). pp. 289-298.

Brodie, Gilianne D., Klussmann-Kolb, Annette, and Gosliner, Terrence M. (2001) Anatomy and histology of a new species of Enotepteron (Cephalaspidea: Gastropteridae) from tropical northeastern Australia. The Veliger, 44 (4). pp. 362-369.

Wilson, Shaun, Burns, Kathryn, and Codi, Susan (2001) Identifying sources of organic matter in sediments from a detritivorous coral reef fish territory. Organic Geochemistry, 32 (10). pp. 1257-1269.

Wilson, J.P., and Sheaves, M. (2001) Short-term temporal variations in taxonomic composition and trophic structure of a tropical estuarine fish assemblage. Marine Biology, 139 (4). pp. 787-796.

Pratchett, M.S., Gust, N., Goby, G., and Klanten, S.O. (2001) Consumption of coral propagules represents a significant trophic link between corals and reef fish. Coral Reefs, 20 (1). pp. 13-17.

Jackson, Jeremy B. C., Kirby, Michael X., Berger, Wolfgang H., Bjorndal, Karen A., Botsford, Louis W., Bourque, Bruce J., Bradbury, Roger H., Cooke, Richard, Erlandson, Jon, Estes, James A., Hughes, Terence P., Kidwell, Susan, Lange, Carina B., Lenihan, Hunter S., Pandolfi, John M., Peterson, Charles H., Steneck, Robert S., Tegner, Mia J., and Warner, Robert R. (2001) Historical overfishing and the recent collapse of coastal ecosystems. Science, 293 (5530). pp. 629-637.

Ferry-Graham, Lara A., Wainwright, Peter C., Westneat, Mark W., and Bellwood, David R. (2001) Modulation of prey capture kinematics in the cheeklined wrasse Oxycheilinus digrammus (Teleostei: Labridae). Journal of Experimental Zoology, 290 (2). pp. 88-100.

van Oppen, Madeleine J.H., McDonald, Brenda J., Willis, Bette, and Miller, David J. (2001) The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence? Molecular Biology and Evolution, 18 (7). pp. 1315-1329.

Adams, S., and Williams, A.J. (2001) A preliminary test of the transitional growth spurt hypothesis using the protogynous coral trout Plectropomus maculatus. Journal of Fish Biology, 59 (1). pp. 183-185.

Caley, M. Julian, Schwarzkopf, Lin, and Shine, Richard (2001) Does total reproductive effort evolve independently of offspring size? Evolution: international journal of organic evolution, 55 (6). pp. 1245-1248.

Bellwood, David R., and Hughes, Terry P. (2001) Regional-scale assembly rules and biodiversity of coral reefs. Science, 292 (5521). pp. 1532-1534.

Ferry-Graham, Lara A., Wainwright, Peter C., Hulsey, C. Darrin, and Bellwood, David R. (2001) Evolution and mechanics of long jaws in butterflyfishes (Family Chaetodontidae). Journal of Morphology, 248 (2). pp. 120-143.

Pratchett, Morgan S. (2001) Influence of coral symbionts on feeding preferences of crown-of-thorns starfish Acanthaster planci in the western Pacific. Marine Ecology-Progress Series, 214. pp. 111-119.

Gust, Nick, Choat, J. Howard, and Mccormick, Mark I. (2001) Spatial variability in reef fish distribution, abundance, size and biomass : a multi-scale analysis. Marine Ecology Progress Series, 214. pp. 237-251.

Eagle, Janelle V., Jones, Geoffrey P., and McCormick, Mark I. (2001) A multi-scale study of the relationships between habitat use and the distribution and abundance patterns of three coral reef angelfishes (Pomacanthidae). Marine Ecology-Progress Series, 214. pp. 253-265.

Meekan, M.G., Ackerman, J.L., and Wellington, G.M. (2001) Demography and age structures of coral reef damselfishes in the tropical eastern Pacific Ocean. Marine Ecology-Progress Series, 212. pp. 223-232.

Stewart, B.D., and Jones, G.P. (2001) Associations between the abundance of piscivorous fishes and their prey on coral reefs: implications for prey-fish mortality. Marine Biology, 138 (2). pp. 383-397.

Ferry-Graham, Lara A., Wainwright, Peter C., and Bellwood, David R. (2001) Prey capture in long-jawed butterflyfishes (Chaetodontidae): the functional basis of novel feeding habits. Journal of Experimental Marine Biology and Ecology, 256 (2). pp. 167-184.

Waycott, M., and Barnes, P.A.G. (2001) AFLP diversity within and between populations of the Caribbean seagrass Thalassia testudinum (Hydrocharitaceae). Marine Biology, 139 (6). pp. 1021-1028.

Schulz, Melissa K., and Alexander, C.G. (2001) Aggressive behaviour of Caprella Scaura Typica Mayer, 1890. (Crustacea: Amphipoda). Marine and Freshwater Behaviour and Physiology, 34 (3). pp. 181-187.

Molony, Brett W., and Sheaves, Marcus J. (2001) Challenges of external insemination in a tropical sparid fish, Acanthopagrus berda. Environmental Biology of Fishes, 61 (1). pp. 65-71.

Kritzer, J.P., Davies, C.R., and Mapstone, B.D. (2001) Characterizing fish populations: effects of sample size and population structure on the precision of demographic parameter estimates. Canadian Journal of Fisheries and Aquatic Sciences, 58 (8). pp. 1557-1568.

Sheaves, Marcus, and Molony, Brett (2001) Coherent patterns of abundance and size of a tropical snapper in dynamic estuary systems. Wetlands Ecology and Management, 9 (5). pp. 429-439.

Crossman, David J., Choat, J. Howard, Clements, Kendall D., Hardy, Tom, and McConochie, Jason (2001) Detritus as food for grazing fishes on coral reefs. Limnology and Oceanography, 46 (7). pp. 1596-1605.

Fisher, R., and Bellwood, D.R. (2001) Effects of feeding on the sustained swimming abilities of late-stage larval Amphiprion melanopus. Coral Reefs, 20 (2). pp. 151-154.

Vytopil, E., and Willis, B.L. (2001) Epifaunal community structure in Acropora spp. (Scleractinia) on the Great Barrier Reef: implications of coral morphology and habitat complexity. Coral Reefs, 20 (3). pp. 281-288.

Munday, Philip L. (2001) Fitness consequences of habitat use and competition among coral-dwelling fishes. Oecologia, 128 (4). pp. 585-593.

Pecl, G. (2001) Flexible reproductive strategies in tropical and temperate Sepioteuthis squids. Marine Biology, 138 (1). pp. 93-101.

Bastidas, C., Benzie, J.A.H., Uthicke, S., and Fabricius, K. (2001) Genetic differentiation among populations of a broadcast spawning soft coral, Sinularia flexibilis, on the Great Barrier Reef. Marine Biology, 138 (3). pp. 517-525.

Michalek-Wagner, K., and Willis, B.L. (2001) Impacts of bleaching on the soft coral Lobophytum compactum. I. Fecundity, fertilization and offspring viability. Coral Reefs, 19 (3). pp. 231-239.

Michalek-Wagner, K., and Willis, B.L. (2001) Impacts of bleaching on the soft coral Lobophytum compactum. II. Biochemical changes in adults and their eggs. Coral Reefs, 19 (3). pp. 240-246.

Munday, Philip L., Jones, Geoffrey P., and Caley, M. Julian (2001) Interspecific competition and coexistence in a guild of coral-dwelling fishes. Ecology, 82 (8). pp. 2177-2189.

Bellwood, D.R., and Wainwright, P.C. (2001) Locomotion in labrid fishes: implications for habitat use and cross-shelf biogeography on the Great Barrier Reef. Coral Reefs, 20 (2). pp. 139-150.

Neil, Kerry M. (2001) Microhabitat segregation of co-existing gastropod species. The Veliger, 44 (3). pp. 294-300.

Wilson, S.K. (2001) Multiscale habitat associations of detrivorous blennies (Blenniidae: Salariini). Coral Reefs, 20 (3). pp. 245-251.

Green, Bridget S., and Mccormick, Mark I. (2001) Ontogeny of the digestive and feeding systems in the anemonefish Amphiprion melanopus. Environmental Biology of Fishes, 61 (1). pp. 73-83.

Emslie, Michael J., and Jones, Geoffrey P. (2001) Patterns of embryo mortality in a demersally spawning coral reef fish and the role of predatory fishes. Environmental Biology of Fishes, 60 (4). pp. 363-373.

Haine, Olivia S., Ridd, Peter V., and Rowe, Richard J. (2001) Range of electrosensory detection of prey by Carcharhinus melanopterus and Himantura granulata. Marine and Freshwater Research, 52 (3). pp. 291-296.

Bellwood, David R., and Fisher, Rebecca (2001) Relative swimming speeds in reef fish larvae. Marine Ecology-Progress Series, 211. pp. 299-303.

Michalek-Wagner, K. (2001) Seasonal and sex-specific variations in levels of photo-protecting mycosporine-like amino acids (MAAs) in soft corals. Marine Biology, 139 (4). pp. 651-660.

Caley, M. Julian, Buckley, Kathryn A., and Jones, Geoffrey P. (2001) Separating ecological effects of habitat fragmentation, degradation, and loss on coral commensals. Ecology, 82 (12). pp. 3435-3448.

Syms, Craig, and Jones, Geoffrey P. (2001) Soft corals exert no direct effects on coral reef fish assemblages. Oecologia, 127 (4). pp. 560-571.

Brodie, Gilianne D. (2001) Some comparative histological aspects of the dendrodorid genera Doriopsilla and Dendrodoris (Opisthobranchia: Nudibranchia). Bollettino Malacologico, 37 (5-8). pp. 99-104.

Purcell, S.W., and Bellwood, D.R. (2001) Spatial patterns of epilithic algal and detrital resources on a windward coral reef. Coral Reefs, 20 (2). pp. 117-125.

Job, Suresh D., and Shand, Julia (2001) Spectral sensitivity of larval and juvenile coral reef fishes: implications for feeding in a variable light environment. Marine Ecology-Progress Series, 214. pp. 267-277.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2001) Territorial damselfishes as determinants of the structure of benthic communities on coral reefs. Oceanography and Marine Biology: an annual review, 39. pp. 355-389.

St John, Jill, Russ, Gary R., Brown, Ian W., and Squire, Lyle C. (2001) The diet of the large coral reef serranid Plectropomus leopardus in two fishing zones on the Great Barrier Reef, Australia. Fishery Bulletin, 99 (1). pp. 180-192.

Michalek-Wagner, K., Bourne, D.J., and Bowden, B.F. (2001) The effects of different strains of zooxanthellae on the secondary-metabolite chemistry and development of the soft-coral host Lobophytum compactum. Marine Biology, 138 (4). pp. 753-760.

Fulton, C.J., Bellwood, D.R., and Wainwright, P.C. (2001) The relationship between swimming ability and habitat use in wrasses (Labridae). Marine Biology, 139 (1). pp. 25-33.

Marnane, M.J. (2000) Site fidelity and homing behaviour in coral reef cardinalfishes. Journal of Fish Biology, 57 (6). pp. 1590-1600.

Ackerman, John L., and Bellwood, David R. (2000) Reef fish assemblages: a re-evaluation using enclosed rotenone stations. Marine Ecology-Progress Series, 206. pp. 227-237.

Ayre, David J., and Hughes, Terence P. (2000) Genotypic diversity and gene flow in brooding and spawning corals along the Great Barrier Reef, Australia. Evolution, 54 (5). pp. 1590-1605.

Anthony, Kenneth R.N., and Fabricius, Katharina E. (2000) Shifting roles of heterotrophy and autotrophy in coral energetics under varying turbidity. Journal of Experimental Marine Biology and Ecology, 252 (2). pp. 221-253.

Fisher, Rebecca, Bellwood, David R., and Job, Suresh (2000) Development of swimming abilities in reef fish larvae. Marine Ecology-Progress Series, 202. pp. 163-173.

Baird, A.H., and Hughes, T.P. (2000) Competitive dominance by tabular corals: an experimental analysis of recruitment and survival of understorey assemblages. Journal of Experimental Marine Biology and Ecology, 251 (1). pp. 117-132.

Koh, Esther G. L., and Sweatman, Hugh (2000) Chemical warfare among scleractinians: bioactive natural products from Tubastraea faulkneri Wells kill larvae of potential competitors. Journal of Experimental Marine Biology and Ecology, 251 (2). pp. 141-160.

Hughes, Terence P., and Tanner, Jason E. (2000) Recruitment failure, life histories, and long-term decline of Caribbean corals. Ecology, 81 (8). pp. 2250-2263.

Marshall, P.A., and Baird, A.H. (2000) Bleaching of corals on the Great Barrier Reef: differential susceptibilities among taxa. Coral Reefs, 19 (2). pp. 155-163.

Adams, S., Mapstone, B.D., Russ, G.R., and Davies, C.R. (2000) Geographic variation in the sex ratio, sex specific size, and age structure of Plectropomus leopardus (Serranidae) between reefs open and closed to fishing on the Great Barrier Reef. Canadian Journal of Fisheries and Aquatic Sciences, 57 (7). pp. 1448-1458.

Baird, A.H., and Babcock, R.C. (2000) Morphological differences among three species of newly settled pocilloporid coral recruits. Coral Reefs, 19 (2). pp. 179-183.

Sheaves, Marcus, and Molony, Brett (2000) Short-circuit in the mangrove food chain. Marine Ecology Progress Series, 199. pp. 97-109.

Stewart, Bryce D., and Beukers, Joanne S. (2000) Baited technique improves censuses of cryptic fish in complex habitats. Marine Ecology-Progress Series, 197. pp. 259-272.

Grutter, Alexandra S. (2000) Ontogenetic variation in the diet of the cleaner fish Labroides dimidiatus and its ecological consequences. Marine Ecology-Progress Series, 197. pp. 241-246.

Kavanagh, Kathryn D. (2000) Larval brooding in the marine damselfish Acanthochromis polyacanthus (Pomacentridae) is correlated with highly divergent morphology, ontogeny and life-history traits. Bulletin of Marine Science, 66 (2). pp. 321-337.

Semmens, Jayson M., and Moltschaniwskyj, Natalie A. (2000) An examination of variable growth in the loliginid squid Sepioteuthis lessoniana: a whole animal and reductionist approach. Marine Ecology-Progress Series, 193. pp. 135-141.

Purcell, Steven W. (2000) Association of epilithic algae with sediment distribution on a windward reef in the Northern Great Barrier Reef, Australia. Bulletin of Marine Science, 66 (1). pp. 199-214.

Campey, M.L., Waycott, M., and Kendrick, G.A. (2000) Re-evaluatingspeciesboundaries among members of the Posidoniaostenfeldiispeciescomplex (Posidoniaceae): morphological and geneticvariation. Aquatic Botany, 66 (1). pp. 41-56.

Allen, James A., Krauss, Ken W., Duke, Norman C., Herbst, Derral R., Björkman, Olle, and Shih, Connie (2000) Bruguiera species in Hawai'i: systematic considerations and ecological implications. Pacific Science, 54 (4). pp. 331-343.

Munday, Philip L. (2000) Changing sex. Nature Australia, 26 (11). pp. 51-60.

Samoilys, Melita A., and Carlos, Gary (2000) Determining methods of underwater visual census for estimating the abundance of coral reef fishes. Environmental Biology of Fishes, 57 (3). pp. 289-304.

Bigelow, P.R., and Alexander, C.G. (2000) Diatoms on the cirri of tropical barnacles. Journal of the Marine Biological Association of the United Kingdom, 80 (4). pp. 737-738.

Syms, Craig, and Jones, Geoffrey P. (2000) Disturbance, habitat structure, and the dynamics of a coral-reef fish community. Ecology, 81 (10). pp. 2714-2729.

Michalek-Wagner, Kirsten, and Bowden, Bruce F. (2000) Effects of bleaching on secondary metabolite chemistry of alcyonacean soft corals. Journal of Chemical Ecology, 26 (7). pp. 1543-1562.

Anthony, K.R.N. (2000) Enhanced particle-feeding capacity of corals on turbid reefs (Great Barrier Reef, Australia). Coral Reefs, 19 (1). pp. 59-67.

Inglis, Graeme J., and Kross, Jacob E. (2000) Evidence for systemic changes in the benthic fauna of tropical estuaries as a result of urbanization. Marine Pollution Bulletin, 41 (7-12). pp. 367-376.

Si, Aung, Alexander, C.G., and Bellwood, O. (2000) Habitat partitioning by two wood-boring invertebrates in a mangrove system in tropical Australia. Journal of the Marine Biological Association of the United Kingdom, 80 (6). pp. 1131-1132.

Arvedlund, Michael, Bundgaard, Ingvar, and Nielsen, Lis E. (2000) Host imprinting in anemonefishes (Pisces: Pomacentridae): does it dictate spawning site preferences? Environmental Biology of Fishes, 58 (2). pp. 203-213.

Munday, Philip L. (2000) Interactions between habitat use and patterns of abundance in coral-dwelling fishes of the genus Gobiodon. Environmental Biology of Fishes, 58 (4). pp. 355-369.

Job, Suresh D., and Bellwood, David R. (2000) Light sensitivity in larval fishes: implications for vertical zonation in the pelagic zone. Limnology and Oceanography, 45 (2). pp. 362-371.

Moltschaniwskyj, Natalie A., and Semmens, Jayson M. (2000) Limited use of stored energy reserves for reproduction by the tropical loliginid squid Photololigo sp. Journal of Zoology, 251 (3). pp. 307-313.

McCauley, R.D., and Cato, D.H. (2000) Patterns of fish calling in a nearshore environment in the Great Barrier Reef. Philosophical Transactions of the Royal Society of London Series B-Biological SciencesPhilosophical Transactions of the Royal Society of London Series, 355. pp. 1289-1293.

Zeller, D.C., and Russ, G.R. (2000) Population estimates and size structure of Plectropomus leopardus (Pisces : Serranidae) in relation to no-fishing zones: mark-release-resighting and underwater visual census. Marine and Freshwater Research, 51 (3). pp. 221-228.

Bellwood, David R., and Randall, John E. (2000) Pseudojuloides severnsi, a new species of wrasse from Indonesia and Sri Lanka (Perciformes: Labridae). Journal of South Asian Natural History, 5 (1). pp. 1-5.

Tanner, Jason E. (2000) Stochastic density dependence in population size of a benthic clonal invertebrate: the regulating role of fission. Oecologia, 122 (4). pp. 514-520.

Omundsen, S.L., Sheaves, M.J., and Molony, B.W. (2000) Temporal population dynamics of the swarming shrimp, Acetes sibogae australis, in a tropical near-shore system. Marine and Freshwater Research, 51 (3). pp. 249-254.

Wilson, S.K. (2000) Trophic status and feeding selectivity of blennies (Blenniidae: Salariini). Marine Biology, 136 (3). pp. 431-437.

Hernaman, V., Munday, P.L., and Schläppy, M. (2000) Validation of otolith growth-increment periodicity in tropical gobies. Marine Biology, 137 (4). pp. 715-726.

Arvedlund, Michael, Larsen, Kim, and Winsor, Heather (2000) The embryonic development of the olfactory system in Amphiprion melanopus (Perciformes: Pomacentridae) related to the host imprinting hypothesis. Journal of the Marine Biological Association of the United Kingdom, 80 (6). pp. 1103-1109.

Stobart, Ben (2000) A taxonomic reappraisal of Montipora digitata based on genetic and morphometric evidence. Zoological Studies, 39 (3). pp. 179-190.

Zeng, Chaoshu, Abello, Pere, and Naylor, Ernest (1999) Endogenous tidal and semilunar moulting rhythms in early juvenile shore crabs Carcinus maenas: implications for adaptation to a high intertidal habitat. Marine Ecology Progress Series, 191. pp. 257-266.

Rasheed, Michael A. (1999) Recovery of experimentally created gaps within a tropical Zostera capricorni (Aschers.) seagrass meadow, Queensland Australia. Journal of Experimental Marine Biology and Ecology, 235 (2). pp. 183-200.

Sheaves, M.J., Molony, B.W., and Tobin, A.J. (1999) Spawning migrations and local movements of a tropical sparid fish. Marine Biology, 133 (1). pp. 123-128.

Duke, Norman C., Benzie, John A.H., Goodall, John A., and Ballment, Elizabeth R. (1998) Genetic structure and evolution of species in the mangrove genus Avicennia (Avicenniaceae) in the Indo-West Pacific. Evolution: international journal of organic evolution, 52 (6). pp. 1612-1626.

Duke, Norman, Ball, Marilyn, and Ellison, Joanna (1998) Factors influencing biodiversity and distributional gradients in mangroves. Global Ecology and Biogeography, 7 (1). pp. 27-47.

Molony, B.W., and Sheaves, M.J. (1998) Otolith increment widths and lipid contents during starvation and recovery feeding in adult Ambassis vachelli (Richardson). Journal of Experimental Marine Biology and Ecology, 221. pp. 257-276.

Sheaves, Marcus (1998) Spatial patterns in estuarine fish faunas in tropical Queensland: a reflection of interaction between long-term physical and biological processes? Marine and Freshwater Research, 49 (1). pp. 31-40.

Molony, Brett W., and Sheaves, Marcus J. (1998) Variations in condition and body constitution in a tropical estuarine fish with year-round recruitment. Mangroves and Salt Marshes , 2 (3). pp. 177-185.

Zeng, Chaoshu, and Naylor, Ernest (1997) Rhythms of larval release in the shore crab Carcinus maenas (Decapoda: Brachyura). Journal of the Marine Biological Association of the United Kingdom, 77 (2). pp. 451-461.

Lloyd, N. J., and Elgar, M. A. (1997) Costs and benefits of facultative aggregating behaviour in the orb-spinning spider Gasteracantha minax Thorell (Araneae: Araneidae). Australian Journal of Ecology, 22 (3). pp. 256-261.

Zeng, C., Naylor, E., and Abello, P. (1997) Endogenous control of timing of metamorphosis in megalopae of the shore crab Carcinus maenas. Marine Biology, 128 (2). pp. 299-305.

Sheaves, Marcus (1996) Do spatial differences in the abundance of two serranid fishes in estuaries of tropical Australia reflect long-term salinity patterns? Marine Ecology Progress Series, 137. pp. 39-49.

Zeng, Chaoshu, and Naylor, Ernest (1996) Endogenous tidal rhythms of vertical migration in field collected zoea-1 larvae of Carcinus maenas: implications for ebb tide offshore dispersal. Marine Ecology Progress Series, 132. pp. 71-82.

Sheaves, M.J. (1996) Habitat-specific distributions of some fishes in a tropical estuary. Marine and Freshwater Research, 47 (6). pp. 827-830.

Zeng, Chaoshu, and Naylor, Ernest (1996) Heritability of circatidal vertical migration rhythms in zoea larvae of the crab Carcinus maenas. Journal of Experimental Marine Biology and Ecology, 202 (2). pp. 239-257.

Zeng, Chaoshu, and Naylor, Ernest (1996) Occurrence in coastal waters and endogenous tidal swimming rhythms of late megalopae of Carcinus maenas: implications for onshore recruitment. Marine Ecology Progress Series, 136. pp. 69-79.

Zeng, Chaoshu, and Naylor, Ernest (1996) Synchronization of endogenous tidal vertical migration rhythms in laboratory-hatched larvae of the crab Carcinus maenas. Journal of Experimental Marine Biology and Ecology, 198 (2). pp. 269-289.

Sheaves, Marcus John (1995) Effect of design modifications and soak time variations on Antillean-Z fish trap performance in a tropical estuary. Bulletin of Marine Science, 56 (2). pp. 475-489.

Duke, Norman C. (1995) Genetic diversity, distributional barriers and rafting continents - more thoughts on the evolution of mangroves. Hydrobiologia, 295 (1). pp. 167-181.

Sheaves, Marcus (1995) Large lutjanid and serranid fishes in tropical estuaries: are they adults or juveniles? Marine Ecology Progress Series, 129. pp. 31-40.

Congdon, Bradley C., and Catterall, Carla P. (1994) Factors influencing the eastern curlews distribution and choice of foraging sites among tidal flats of Moreton Bay, South-east Queensland. Wildlife Research, 21 (5). pp. 507-518.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1994) Los manglares / The swamps. Scientia, 8 (2). pp. 80-98.

Duke, Norman C. (1994) A mangrove hybrid, Sonneratia x urama (Sonneratiaceae) from northern Australia and southern New Guinea. Australian Systematic Botany, 7 (5). pp. 521-526.

Sheaves, M.J. (1993) Patterns of movement of some fishes within an estuary in Tropical Australia. Australian Journal of Marine and Freshwater Research, 44 (6). pp. 867-880.

Sheaves, M.J. (1992) Patterns of distribution and abundance of fishes in different habitats of a mangrove-lined tropical estuary, as determined by fish trapping. Australian Journal of Marine and Freshwater Research, 43 (6). pp. 1461-1479.

Duke, N.C. (1991) A systematic revision of the mangrove genus Avicennia (Avicenniaceae) in Australasia. Australian Systematic Botany, 4 (2). pp. 299-324.

Robertson, A.I., and Duke, N.C. (1990) Mangrove fish communities in tropical Queensland, Australia: spatial and temporal patterns in densities, biomass and community structure. Marine Biology, 104 (3). pp. 369-379.

Duke, N.C. (1990) Morphological variation in the mangrove genus Avicennia in Australasia: systematic and ecological considerations. Australian Systematic Botany, 3 (2). pp. 221-239.

Hughes, Terence P. (1990) Recruitment limitation, mortality, and population regulation in open systems: a case-study. Ecology, 71 (1). pp. 12-20.

Robertson, Alistar I., and Duke, Norman C. (1990) Recruitment, growth and residence time of fishes in a tropical Australian mangrove system. Estuarine, Coastal and Shelf Science, 31 (5). pp. 723-743.

Hughes, Terence P. (1989) Community structure and diversity of coral reefs: the role of history. Ecology, 70 (1). pp. 275-279.

Duke, N.C. (1988) Phenologies and litter fall of two mangrove trees, Sonneratia alba Sm. and S. caseolaris (L.) Engl., and their putative hybrid, S. X gulngai N.C. Duke. Australian Journal of Botany, 36 (4). pp. 473-482.

Duke, Norman (1988) An endemic mangrove species, Avicennia integra sp. nov. (Avicenniaceae), in northern Australia. Australian Systematic Botany, 1 (2). pp. 177-180.

Hughes, Terence P. (1987) Skeletal density and growth form of corals. Marine Ecology Progress Series, 35 (3). pp. 259-266.

Hughes, Terence P., Reed, Daniel C., and Boyle, Mary-Jo (1987) Herbivory on coral reefs: community structure following mass mortalities of sea urchins. Journal of Experimental Marine Biology and Ecology, 113 (1). pp. 39-59.

Smith, Thomas J. III, and Duke, Norman C. (1987) Physical determinants of inter-estuary variation in mangrove species richness around the tropical coastline of Australia. Journal of Biogeography, 14 (1). pp. 9-19.

Hughes, Terence P., and Connell, Joseph H. (1987) Population dynamics based on size or age? A reef-coral analysis. American Naturalist, 129 (6). pp. 818-829.

Duke, N.C., and Jackes, Betsy R. (1987) A systematic revision of the mangrove genus Sonneratia (Sonneratiaceae) in Australasia. Blumea, 32 (2). pp. 277-302.

Jackson, Jeremy B.C., and Hughes, Terence P. (1985) Adaptive strategies of coral reef invertebrates: coral reef environments that are regularly disturbed by storms and by predation often favor the very organisms most susceptible to damage by these processes. American Scientist, 73 (3). pp. 265-274.

Hughes, T.P., Keller, B.D., Jackson, J.B.C., and Boyle, M.J. (1985) Mass mortality of the echinoid Diadema antillarum Philippi in Jamaica. Bulletin of Marine Science, 36. pp. 377-384.

Hughes, T.P., and Jackson, J.B.C. (1985) Population dynamics and life histories of foliaceeous corals. Ecological Monographs, 55 (2). pp. 141-166.

Hughes, Terence P. (1984) Population dynamics based on individual size rather than age: a general model with a reef coral example. American Naturalist, 123 (6). pp. 778-795.

Duke, N.C. (1984) A mangrove hybrid, Sonneratia X gulngai (Sonneratiaceae), from north-eastern Australia. Austrobaileya, 2 (1). pp. 103-105.

Bunt, J.S., Williams, W.T., and Duke, N.C. (1982) Mangrove distributions in north-east Australia. Journal of Biogeography, 9 (2). pp. 111-120.

Primack, Richard B., Duke, Norman C., and Tomlinson, P.B. (1981) Floral morphology in relation to pollination ecology in five Queensland coastal plants. Austrobaileya, 1 (4). pp. 346-355.

Hughes, Terry, and Jackson, Jeremy (1980) Do corals lie about their age: some demographic consequences of partial mortality, fission, and fusion. Science, 209 (4457). pp. 713-715.

Duke, N.C., and Bunt, J.S. (1979) The genus Rhizophora (Rhizophoraceae) in north-eastern Australia. Australian Journal of Botany, 27 (5). pp. 657-678.

Tomlinson, P.B., Bunt, J.S, Primack, R.B., and Duke, N.C. (1978) Lumnitzera rosea (Combretaceae) - its status and floral morphology. Journal of the Arnold Herbarium, 59. pp. 342-351.

Book Chapter

Zeng, Chaoshu, Rotllant, Guiomar, Giménez, Luis, and Romano, Nicholas (2021) Effects of environmental conditions on larval growth and development. In: Anger, Klaus, Harzsch, Steffen, and Thiel, Martin, (eds.) Developmental Biology and Larval Ecology. The Natural History of the Crustacea, 7 . Oxford University Press, Oxford, UK, pp. 195-222.

McLeod, Ian Michael, zu Ermgassen, Philine S.E., Gillies, Chris L., Hancock, Boze, and Humphries, Austin (2019) Can bivalve babitat restoration improve degraded estuaries? In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, UK, pp. 427-442.

Duke, N.C., and Larkum, A.W.D. (2019) Mangroves and seagrasses. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO, Melbourne, VIC, Australia, pp. 219-228.

Kingsford, M. J., and Mckinnon, A. D. (2019) Plankton. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 191-206.

Dunn, Ryan J.K., Waltham, Nathan J., Huang, Jianyin, Teasdale, Peter R., and King, Brian A. (2019) Protecting water quality in urban estuaries: Australian case studies. In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, United Kingdom, pp. 69-86.

York, Paul H., Hyndes, Glenn A., Bishop, Melanie J., and Barnes, Richard S.K. (2018) Faunal assemblages of seagrass ecosystems. In: Larkum, Anthony W.D., Kendrick, Gary A., and Ralph, Peter J., (eds.) Seagrasses of Australia: Structure, Ecology and Conservation. Springer, Cham, Switzerland, pp. 541-588.

Sherman, Craig C.D., Smith, Timothy M., York, Paul H., Jarvis, Jessie C., Ruiz-Montoya, Leonardo, and Kendrick, Gary A. (2018) Reproductive, dispersal and recruitment strategies in Australian seagrasses. In: Larkum, Anthony A.W., Kendrick, Gary A., and Ralph, Peter J., (eds.) Seagrasses of Australia: Structure, Ecology and Conservation. Springer, Cham, Switzerland, pp. 213-256.

Marsh, Helene, Brooks, Lyndon, and Hagihara, Rie (2018) The challenge of monitoring coastal marine mammals. In: Legge, Sarah, Lindenmayer, David B., Robinson, Natasha M., Scheele, Benjamin C., Southwell, Darren M., and Wintle, Brendan A., (eds.) Monitoring Threatened Species and Ecological Communities. CSIRO, Melbourne, VIC, Australia, pp. 291-302.

Duke, Norman C. (2017) Mangrove floristics and biogeography revisited: further deductions from biodiversity hot spots, ancestral discontinuities and common evolutionary processes. In: Rivera-Monroy, Victor H., Lee, Shing Yip, Kristensen, Erik, and Twilley, Robert R., (eds.) Mangrove Ecosystems: A Global Biogeographic Perspective - Structure, Function and Services. Springer International Publishing, Cham, Switzerland, pp. 17-53.

Duke, Norman C., and Schmitt, Klaus (2015) Mangroves: unusual forests at the seas edge. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-24.

Suárez Castillo, Alvin N., Torre, Jorge, and Álvarez Romero, Jorge (2014) Diseño de una red de reservas marinas para los arrecifes costeros en la Región de las Grandes Islas, Golfo de California. In: Comisión Nacional para el Conocimiento y Uso de la Biodiversidad, (CONABIO), (ed.) Quinto Informe Nacional de México ante el Convenio Sobre la Diversidad Biológica. Comisión Nacional para el Conocimiento y Uso de la Biodiversidad (CONABIO), Mexico City, Mexico, pp. 247-249.

Duke, Norman (2014) Mangrove coast. In: Harff, Jan, Meschede, Martin, Petersen, Sven, and Thiede, Jörn, (eds.) Encyclopedia of Marine Geosciences. Encyclopedia of Earth Sciences Series . Springer, The Netherlands, pp. 412-422.

Duke, Norm (2012) Mangroves of South-East Australia. In: Sainty, Geoff, Hosking, John, Carr, Geoff, and Adam, Paul, (eds.) Estuary plants and what's happening to them in south-east Australia. Sainty and Associates, Potts Point, Sydney, pp. 132-139.

Pratchett, Morgan S., Bay, Line K., Coker, Darren J., Cole, Andrew J., and Lawton, Rebecca J. (2012) Effects of coral bleaching on coral habitats and associated fishes. In: Lunney, Daniel, and Hutchings, Pat, (eds.) Wildlife and Climate Change: towards robust conservation strategies for Australian fauna. RZS Forum Series . Royal Zoological Society New South Wales, Sydney, NSW, pp. 59-67.

Marsh, Helene, Weiss, Kristen, and Grech, Alana (2012) Dugongs. In: Curtis, Lee K., Dennis, Andrew J., McDonald, Keith R., Kyne, Peter M., and Debus, Stephen J.S., (eds.) Queensland's Threatened Animals. CSIRO Publishing, Collingwood, NSW, Australia, pp. 410-411.

Rowe, Cassandra (2012) Modern surface pollen from the Torres Strait Islands: exploring north Australian vegetation heterogeneity. In: Haberle, Simon G., and David, Bruno, (eds.) Peopled Landscapes: archaeological and biogeographic approaches to landscape. Terra Australis, 34 . ANU E Press, Canberra, ACT, Australia, pp. 413-434.

Coles, Rob, Grech, Alana, Rasheed, Mike, McKenzie, Len, Unsworth, Richard, and Short, Fred (2011) Seagrass ecology and threats in the tropical Indo-Pacific bioregion. In: Pirog, Robert S., (ed.) Seagrass: Ecology Uses and Threats. Oceanography and Ocean Engineering . Nova Science Publishers, New York, NY, USA, pp. 225-239.

Dowe, John L., and Jones, David L. (2011) Arecaceae. In: Wilson, Annette, (ed.) Flora of Australia. Flora of Australia Series, 39 . Australian Biological Resources Study/CSIRO, Melbourne, VIC, Australia, pp. 145-210.

Duke, Norman C. (2011) Mangroves. In: Hopley, David C., (ed.) Encyclopedia of Modern Coral Reefs. Structure, Form and Process. Encyclopedia of Earth Sciences Series . Springer, Dordrecht, The Netherlands, pp. 655-663.

Duke, N.C., and Larkum, A.W.D. (2008) Mangroves and seagrasses. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Collingwood, VIC, pp. 156-170.

Heatwole, H., and Lukoschek, V. (2008) Reptiles. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 342-348.

Goudkamp, Katrina, and Chin, Andrew (2006) Mangroves and saltmarshes. In: Chin, Andrew, (ed.) The State of the Great Barrier Reef Online. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 1-36.

Turner, Malcolm, Green, Rachel, and Chin, Andrew (2006) Birds. In: Chin, Andrew, (ed.) The State of the Great Barrier Reef Online. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 1-33.

Duke, Norman C., and Allen, James A. (2006) Atlantic-East Pacific red mangroves: Rhizophora mangle, R. samoensis, R. racemosa, R. X harrisonii. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-18.

Duke, Norman C. (2006) Indo-West Pacific stilt mangroves: Rhizophora apiculata, R. mucronata, R. stylosa, R. X annamalai, R. X lamarckii. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 641-660.

Allen, James A., and Duke, Norman C. (2006) Large-leafed mangrove: Bruguiera gymnorrhiza. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-15.

Chin, Andrew (2005) Sharks and rays. In: Chin, Andrew, (ed.) The State of the Great Barrier Reef Online. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 1-33.

Chin, Andrew (2005) Seagrasses. In: Chin, Andrew, (ed.) The State of the Great Barrier Reef Online. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 1-15.

Marsh, Helene, Arnold, Peter , Freeman, Milton, Haynes, David, Laist, David, Read, Andrew , Reynolds, John , and Kasuya, Toshio (2003) Strategies for conserving marine mammals. In: Gales, Nick, Hindell, Mark, and Kirkwood, Roger, (eds.) Marine Mammals: fisheries, tourism and management issues. CSIRO Publishing, Collingwood, VIC, Australia, pp. 1-19.

Marsh, Helene, Penrose, Helen, and Eros, Carole (2003) A future for the dugong. In: Gales, Nick, Hindell, Mark, and Kirkwood, Roger, (eds.) Marine Mammals: fisheries, tourism and management issues. CSIRO Publishing, Collingwood, VIC, Australia, pp. 383-399.

Inglis, Graeme J., and Waycott, Michelle (2001) Methods for assessing seagrass seed ecology and population genetics. In: Short, F.T., and Coles, R.G., (eds.) Global Seagrass Research Methods. Elsevier Science, Amsterdam, The Netherlands, pp. 123-140.

Wainwright, Peter C., Westneat, Mark W., and Bellwood, David R. (2000) Linking feeding behaviour and jaw mechanics in fishes. In: Domenici, P., and Blake, R.W., (eds.) Biomechanics in Animal Behaviour. BIOS Scientific Publishers Ltd, pp. 207-221.

Duke, Norman (1997) Mangroves in the Great Barrier Reef World Heritage Area: current status, long-term trends, management implications and research. In: Wachenfeld, David, Oliver, Jamie, and Davis, Kim, (eds.) State of the Great Barrier Reef World Heritage Area Workshop. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 288-299.

Duke, Norman C. (1992) Mangrove floristics and biogeography. In: Robertson, A.I., and Alongi, D.M., (eds.) Tropical Mangrove Ecosystems. Coastal and Estuarine Studies Series (41). American Geophysical Union, Washington, D.C., pp. 63-100.

Hughes, T.P. (1988) Long-term dynamics of coral populations: contrasting reproductive modes. In: Choat, J.H., Barnes, D., Borowitzka, M.A., Coll, J.C., Davies, P.J., Flood, P., Hatcher, B.G., Hopley, D., Hutchings, P.A., Kinsey, D., Orme, G.R., Pichon, M., Sale, P..F, Sammarco, P., Wallace, C.C., Wilkinson, C., Wolanski, E., and Bellwood, O., (eds.) Proceedings of the 6th International Coral Reef Symposium. International Society for Reef Studies, Townsville, QLD, Australia, pp. 721-725.

Hughes, T.P. (1985) Life histories and population dynamics of early successional corals. In: Gabrie, C., and Salvat, B., (eds.) Proceedings of the Fifth International Coral Reef Congress. Antenne Museum-EPHE, Moorea, French Polynesia, pp. 101-106.

Hughes, Terence (1983) Life histories and growth of corals over a depth gradient. In: Reaka, Marjorie L., (ed.) The Ecology of Deep and Shallow Water Coral Reefs. Symposia Series for Undersea Research, 1 . National Oceanic and Atmospheric Administration, Washington, DC, USA, pp. 17-20.

Report

Collier, Catherine J., Langlois, Lucas, Zemoi, Rahel, Martin, Katherine, and McKenzie, Len (2016) Developing and refining biological indicators for condition assessments in an integrated monitoring program. Report. James Cook University, Cairns, Australia.

Collier, Catherine J., Chartrand, Katie, Honchin, Carol, Fletcher, Adam, and Rasheed, Michael (2016) Light thresholds for seagrasses of the GBRWHA: a synthesis and guiding document. Report. James Cook University, Cairns, Australia.

Bryant, C.V., Carter, A.B., Jarvis, J.C., and Rasheed, M.A. (2016) Port Curtis seagrass seed bank density and viability studies: year 2 report. Report. James Cook University, Cairns, QLD, Australia.

Jarvis, J.C., Scott, E.L., Bryant, C.V., and Rasheed, M.A. (2015) Port Curtis seagrass seed bank density and viability studies: year 1. Report. James Cook University, Cairns, QLD, Australia.

Collier, Catherine J., Devlin, Michelle, Langlois, Lucas, McKenzie, Len J., Petus, Caroline, Da Silva, Eduardo Teixeira, McMahon, Kathryn, Adams, Matthew, O'Brien, Kate, Statton, John, and Waycott, Michelle (2014) Final report on thresholds and indicators of declining water quality as tools for tropical seagrass management. Report. James Cook University, Townsville, Australia.

Augé, Amélie A. (2013) Conservation goals and objectives for the Great Barrier Reef coastal zone. Report. Reef and Rainforest Research Centre , Cairns, QLD, Australia.

Jarvis, Jessie C. (2010) Vertical Accretion Rates in Coastal Louisiana: a review of the scientific literature. Report. U.S. Army Engineer Research and Development Center, Vicksburg, MS, USA.

Boyle, M.J., Alvarez-Romero, J.G., and Hughes, T.P. (2008) Ningaloo Coast World Heritage Nomination: a comparative analysis with similar properties. Report. Australian Research Council Centre of Excellence for Coral Reef Studies, Townsville, QLD, Australia.

Dowe, John Leslie (2008) Botanical Inventory of the Mungalla Coastal Habitats. Report. James Cook University, Townsville, QLD, Australia.

Wolstenholme, Jacqueline K., and Wallace, Carden C. (2004) Australian anemones final report accompanied by attribution database of Australian anemones (on CD rom): prepared for the Department of Environment and Heritage, Heritage Division. Report. Museum of Tropical Queensland, Townsville.

Conference Item

Hess, Sybille, Wenger, Amelia, Ainsworth, Tracy, and Rummer, Jodie (2015) Too turbid for nemo: suspended sediment impacts gills and favours pathogenic bacteria in clownfish larvae. In: [Presented at 145th Annual Meeting of the American Fisheries Society]. From: AFS 2015: 145th Annual Meeting of the American Fisheries Society, 16-20 August 2015, Portland, OR, USA.

Augé, Amélie A., Maughan, Mirjam, Pressey, Robert L., Brodie, Jon, Dale, Allan, and Yorkston, Hugh (2013) Spatially explicit scenarios for conservation planning in the Great Barrier Reef coastal zone, Australia. In: Proceedings of the CoastGIS Conference 2013: monitoring and adapting to change on the coast. pp. 179-182. From: CoastGIS 2013: 11th International Symposium for GIS and Computer Cartography for Coastal Zone Management, 18-21 June 2013, Victoria, BC, Canada.

McCowan, Dominique M., Pratchett, Morgan S., and Baird, Andrew H. (2012) Bleaching susceptibility and mortality among corals with differing growth forms. In: Proceedings of the 12th International Coral Reef Symposium. 9A_7. pp. 1-6. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Coles, Robert, Grech, Alana, Rasheed, Michael, and McKenzie, Len (2012) Evaluating risk to seagrasses in the Tropical Indo-Pacific Region. In: Proceedings of the 12th International Coral Reef Symposium. 15B_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Baird, Andrew H., Emslie, Michael J., and Lewis, Andrew R. (2012) Extended periods of coral recruitment on the Great Barrier Reef. In: Proceedings of the 12th International Coral Reef Symposium. 12A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Tan, James C.H., Pratchett, Morgan S., Bay, Line K., and Baird, Andrew H. (2012) Massive coral mortality following a large flood event. In: Proceedings of the 12th International Coral Reef Symposium. 11E_1. pp. 1-4. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Anderson, Kristen, Pratchett, Morgan, and Baird, Andrew (2012) Summer growth rates of corals at Lord Howe Island, Australia. In: Proceedings of the 12th International Coral Reef Symposium. 4C_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Stieglitz, T., Chauvaud, L., Amice, E., Thebault, J., Peel, J., Aldana-Aranda, D., and Enriquez Diaz, M. (2011) Habitat usage of a groundwater-fed coastal inlet by the iconic and endangered queen conch Strombus gigas, Yucatan Peninsula, Mexico. In: Abstracts from 25th International Union of Geodesy and Geophysics General Assembly. p. 1. From: IUGG 2011 25th International Union of Geodesy and Geophysics General Assembly, 28 June - 7 July 2011, Melbourne, VIC, Australia.

Salih, Anya, Cox, Guy, Szymczak, Ron, Coles, Steve, Baird, Andrew, Dunstan, Andy, Cocco, Giordana, Mills, Jacqui, and Larkum, Anthony (2006) The role of host-based color and fluorescent pigments in photoprotection and in reducing bleaching stress in corals. In: Proceedings of 10th International Coral Reef Symposium. pp. 746-756. From: 10th International Coral Reef Symposium, 28 June - 2 July, 2004, Okinawa, Japan.

Hughes, T.P. (2006) Biogeography, climate change and evolution of corals reefs. In: Proceedings of the Tenth International Coral Reef Symposium. p. 1. From: Tenth International Coral Reef Symposium, 28 June - 02 July 2004, Okinawa, Japan.

McCormick, Mark I., and Hoey, Andrew S. (2006) Biological and physical correlates of settlement and survival for a coral reef fish, Pomacentrus amboinensis (Pomacentridae). In: Proceedings of the 10th International Coral Reef Symposium. pp. 425-430. From: 10th International Coral Reef Symposium, 28 June -2 July 2004, Okinawa Convention Center, Okinawa, Japan.

Pinca, S., Beger, M., Muller, B., Reeves, E., and White, M. (2006) Community analysis of reef habitats in the Marshall Islands. In: Proceedings of 10th International Coral Reef Symposium. pp. 300-305. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa, Japan.

Hoey, Andrew S., and McCormick, Mark I. (2006) Effects of subcutaneous fluorescent tags on the growth and survival of a newly settled coral reef fish, Pomacentrus amboiensis (Pomacentridae). In: Proceedings of 10th International Coral Reef Symposium. pp. 420-424. From: 10th International Coral Reef Symposium, 28 June-2 July 2004, Okinawa Convention Center, Okinawa, Japan.

Gilmour, James P., Baird, Andrew H., Pratchett, Morgan S., and Smith, Luke D. (2006) The maintenance of populations of the mushroom coral Fungia fungites under different disturbance regimes: sexual versus asexual recruitment. In: Proceedings of the 10th International Coral Reef Symposium. pp. 351-358. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa, Japan.

Thomas, C., Hart, B., Nicholson, A., Grace, M., Brodie, J., and Pollino, C. (2005) Development of criteria for simplifying ecological risk models. In: MODSIM05 International Conference on Modelling and Simulation. pp. 772-778. From: MODSIM05 International Conference on Modelling and Simulation, 12-15 December 2005, Melbourne, Australia.

Duke, Norman, and Khan, M. Ajmal (1999) Structure and composition of the seaward mangrove forest at Mai Po Marshes Nature Reserve, Hong Kong. In: The mangrove ecosystem of Deep Bay and the Mai Po marshes, Hong Kong : proceedings of the International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, Hong Kong. pp. 83-104. From: International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, 3-20 September 1993, Hong Kong.

Warner, Robert R., and Hughes, Terence P. (1988) The population dynamics of reef fishes. In: Proceedings of the International Coral Reef Symposium (6) pp. 149-155. From: 6th International Coral Reef Symposium, 8-12 August 1988, Townsville, QLD, Australia.

Book

Hooker, Nanette B. (2016) Grasses of Townsville. James Cook University, Townsville, QLD, Australia.

Duke, Norman (2013) Mangroves of the Kien Giang Biosphere Reserve Vietnam. Conservation and Development of the Kien Giang Biosphere Reserve . Agricultural Publishing House, Hanoi, Vietnam.

Dowe, John (2010) Australian Palms: Biogeography, Ecology and Systematics. CSIRO Publishing, Collingwood, Victoria, Australia.

Duke, Norman (2006) Australia's Mangroves: an authoritative guide to Australia’s mangrove plants. University of Queensland and Norman C. Duke, Brisbane, QLD, Australia.

Thesis

Fries, Jakob (2019) Measuring productivity of Australian tropical estuaries using standing stock analysis. Masters (Research) thesis, James Cook University.

Trave, Claudia (2019) Novel approach for the classification of habitats in tropical estuaries exposed to urban and industrial development. PhD thesis, James Cook University.

Buelow, Christina Amy (2017) Integrated assessment of ecosystem connectivity and functioning: coastal forest avifauna of northeast Australia. PhD thesis, James Cook University.

Mattone, Carlo (2016) Benthic infauna of mangrove forests: dissolved oxygen and environmental settings determine their community composition and function. PhD thesis, James Cook University.

Almeida Magris, Rafael (2015) Advancing conservation planning for persistence: design of a conservation strategy for Brazilian coral reefs. PhD thesis, James Cook University.

Sheaves, Janine (2015) Influence of seasonal variability and salinity gradients on benthic invertebrate assemblages in tropical and subtropical Australian estuaries. PhD thesis, James Cook University.

Udyawer, Vinay (2015) Spatial ecology of true sea snakes (Hydrophiinae) in coastal waters of North Queensland. PhD thesis, James Cook University.

Davis, Benjamin James (2014) Patterns and processes at multiple scales shape fish assemblage structure in tropical estuaries. PhD thesis, James Cook University.

Abdul Wahab, Muhammad Azmi (2014) A holistic approach towards understanding population dynamics of a coral reef sponge. PhD thesis, James Cook University.

Chin, Andrew (2013) The biology and ecology of the blacktip reef shark Carcharhinus melanopterus (Quoy & Gaimard, 1824) and implications for management. PhD thesis, James Cook University.

Berg Soto, Alvaro (2012) Evaluation of different management approaches to reduce the bycatch of Indo-Pacific humpback dolphins (Sousa chinensis) and Australian snubfin dolphins (Orcaella heinsohni) in Queensland, Australia. PhD thesis, James Cook University.

Blanchette, Melanie Lise (2012) The ecology of rivers in the Australian dry tropics. PhD thesis, James Cook University.

Vermeiren, Peter Elisa Juliaan (2012) A landscape level understanding of habitat associations to integrate intertidal crabs into ecosystem models of tropical estuaries. PhD thesis, James Cook University.

Heatwole, Harold (2010) Distribution and geographic variation of sea kraits in the Laticauda colubrina complex (Serpentes, Elapidae, Laticaudinae). PhD thesis, James Cook University.

Chick, Rowan C. (2010) Stock enhancement of local populations of blacklip abalone (Haliotis rubra Leach) in New South Wales, Australia. PhD thesis, James Cook University.

Abrantes, Kátya Gisela dos Santos (2008) Trophic structure and the importance of terrestrial wetland producers for aquatic food webs in tropical Australian estuaries. PhD thesis, James Cook University.

Baker, Ronald (2006) Piscivory and the functioning of shallow tropical estuarine nursery grounds. PhD thesis, James Cook University.

Salkeld, Daniel Joseph (2004) The ecology of a host-parasite relationship: haemogregarines and the eastern water skink, Eulamprus quoyii. PhD thesis, James Cook University.

Haycock, Lucy Jessica (2004) The reproduction and recruitment of the sand dollar Arachnoides placenta (L.) (Echinoidea: Echinodermata) from differing habitats on the North Queensland coast. Masters (Research) thesis, James Cook University.

Rosser, Zoe Catherine (1998) The role of disturbance in community dynamics and structuring of tropical rainforest stream communities. PhD thesis, James Cook University.

Crossland, Michael Richard (1997) Impact of eggs, hatchlings and tadpoles of the introduced cane toad Bufo marinus (Anura: Bufonidae) on native aquatic fauna in Northern Queensland. PhD thesis, James Cook University.

Sheaves, Marcus John (1995) Estuaries as juvenile habitats for lutjanid and serranid fishes in tropical northeastern Australia. PhD thesis, James Cook University.

Lovelock, Catherine Ellen (1991) Adaptation of tropical mangroves to high solar radiation. PhD thesis, James Cook University.

Hearnden, Mark Nelson (1991) The reproductive and larval ecology of Bufo marinus (Anura: Bufonidae). PhD thesis, James Cook University of North Queensland.

Spenceley, Anthony Phillip (1980) The geomorphological and zonational development of mangrove swamps in the Townsville area, North Queensland. PhD thesis, James Cook University.