Article

Younes, Nicolas, Joyce, Karen E., and Maier, Stefan M. (2021) All models of satellite-derived phenology are wrong, but some are useful: a case study from northern Australia. International Journal of Applied Earth Observation and Geoinformation, 97 (102285).

Hill, Narelle K., Woodworth, Bradley K., Phinn, Stuart R., Murray, Nicholas J., and Fuller, Richard A. (2021) Global protected‐area coverage and human pressure on tidal flats. Conservation Biology, 35 (3). pp. 933-943.

Scott, Abigail L., York, Paul H., and Rasheed, Michael A. (2021) Herbivory has a major influence on structure and condition of a Great Barrier Reef subtropical seagrass meadow. Estuaries and Coasts, 44. pp. 506-521.

Jackson, Emma L., Smith, Timothy M., York, Paul H., Nielsen, Jesper, Irving, Andrew D., and Sherman, Craig D. H. (2021) An assessment of the seascape genetic structure and hydrodynamic connectivity for sub-tropical seagrass restoration. Restoration Ecology, 29 (1). e13269.

Abbott, Brett N., Wallace, Jim, Nicholas, David M., Karim, Fazlul, and Waltham, Nathan J. (2020) Bund removal to re-establish tidal flow, remove aquatic weeds and restore coastal wetland services—North Queensland, Australia. PLoS ONE, 15 (1). e0217531.

Lau, Jacqueline D., Cinner, Joshua E., Fabinyi, Michael, Gurney, Georgina G., and Hicks, Christina C. (2020) Access to marine ecosystem services: examining entanglement and legitimacy in customary institutions. World Development, 126. 104730.

Stewart-Sinclair, Phoebe J., Purandare, Jemma, Bayraktarov, Elisa, Waltham, Nathan, Reeves, Simon, Statton, John, Sinclair, Elizabeth A., Brown, Benjamin M., Shribman, Zoë I., and Lovelock, Catherine E. (2020) Blue restoration - building confidence and overcoming barriers. Frontiers in Marine Science, 7. 541700.

Thomas, Colette R., Bennett, William W., Garcia, Clement, Simmonds, Andrew, Honchin, Carol, Turner, Ryan, Madden Hof, Christine A., and Bell, Ian (2020) Coastal bays and coral cays: multi-element study of Chelonia mydas forage in the Great Barrier Reef (2015–2017). Science of the Total Environment, 740. 140042.

Smallhorn-West, Patrick F., Stone, Karen, Ceccarelli, Daniela M., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13. e12755.

Smallhorn-West, Patrick F., Weeks, Rebecca, Gurney, Georgina, and Pressey, Robert L. (2020) Ecological and socioeconomic impacts of marine protected areas in the South Pacific: assessing the evidence base. Biodiversity and Conservation, 29 (2). pp. 349-380.

Baker, Ronald, Taylor, Matthew D., Able, Kenneth W., Beck, Michael W., Cebrian, Just, Colombano, Denise D., Connolly, Rod M., Currin, Carolyn, Deegan, Linda A., Feller, Ilka C., Gilby, Ben L., Kimball, Matthew E., Minello, Thomas J., Rozas, Lawrence P., Simenstad, Charles, Turner, R. Eugene, Waltham, Nathan J., Weinstein, Michael P., Ziegler, Shelby L., zu Ermgassen, Philine S.E., Alcott, Caitlin, Alford, Scott B., Barbeau, Myriam A., Crosby, Sarah C., Dodds, Kate, Frank, Alyssa, Goeke, Janelle, Goodridge Gaines, Lucy A., Hardcastle, Felicity E., Henderson, Christopher J., James, W. Ryan, Kenworthy, Matthew D., Lesser, Justin, Mallick, Debbrota, Martin, Charles W., McDonald, Ashley E., McLuckie, Catherine, Morrison, Blair H., Nelson, James A., Norris, Gregory S., Ollerhead, Jeff, Pahl, James W., Ramsden, Sarah, Rehage, Jennifer S., Reinhardt, James F., Rezek, Ryan J., Risse, L. Mark, Smith, Joseph A.M., Sparks, Eric L., and Staver, Lorie W. (2020) Fisheries rely on threatened salt marshes. Science, 370 (6517). pp. 670-671.

Grantham, Ruby, Lau, Jacqueline, and Kleiber, Danika (2020) Gleaning: beyond the subsistence narrative. Maritime Studies, 19. pp. 509-524.

Scott, Abigail L., York, Paul H., and Rasheed, Michael A. (2020) Green turtle (Chelonia mydas) grazing plot formation creates structural changes in a multi-species Great Barrier Reef seagrass meadow. Marine Environmental Research, 162. 105183.

Ricart, Aurora M., York, Paul H., Bryant, Catherine V., Rasheed, Michael A., Ierodiaconou, Daniel, and Macreadie, Peter I. (2020) High variability of Blue Carbon storage in seagrass meadows at the estuary scale. Scientific Reports, 10. 5865.

Gilby, Ben L., Weinstein, Michael P., Baker, Ronald, Cebrian, Just, Alford, Scott B., Chelsky, Ariella, Colombano, Denise, Connolly, Rod M., Currin, Carolyn A., Feller, Ilka C., Frank, Alyssa, Goeke, Janelle A., Goodridge Gaines, Lucy A., Hardcastle, Felicity E., Henderson, Christopher J., Martin, Charles W., McDonald, Ashley E., Morrison, Blair H., Olds, Andrew D., Rehage, Jennifer S., Waltham, Nathan J., and Ziegler, Shelby L. (2020) Human actions alter tidal marsh seascapes and the provision of ecosystem services. Estuaries and Coasts.

Arthington, Angela H., Pearson, Richard G., Godfrey, Paul C., Karim, Fazlul, and Wallace, Jim (2020) Integrating freshwater wetland science into planning for Great Barrier Reef sustainability. Aquatic Conservation: Marine and Freshwater Ecosystems, 30 (9). pp. 1727-1733.

Henderson, Christopher J., Gilby, Ben L., Schlacher, Thomas A., Connolly, Rod M., Sheaves, Marcus, Maxwell, Paul S., Flint, Nicole, Borland, Hayden P., Martin, Tyson S.H., and Olds, Andrew D. (2020) Low redundancy and complementarity shape ecosystem functioning in a low-diversity ecosystem. Journal of Animal Ecology, 89. pp. 784-794.

Duke, Norman (2020) Mangrove harbingers of coastal degradation seen in their responses to global climate change coupled with ever-increasing human pressures. Human Ecology Journal of the Commonwealth Human Ecology Council – Mangrove Special Issue, 30 (April 2020). pp. 19-23.

Waltham, Nathan J., Pyott, Merv, Buelow, Christina, and Wearne, Lynise (2020) Mechanical harvester removes invasive aquatic weeds to restore water quality and fish habitat values on the Burdekin floodplain. Ecological Management and Restoration, 21 (3). pp. 187-197.

Duce, Stephanie, Dechnik, Belinda, Webster, Jody M., Hua, Quan, Sadler, James, Webb, Gregory E., Nothdurft, Luke, Salas-Saavedra, Marcos, and Vila-Concejo, Ana (2020) Mechanisms of spur and groove development and implications for reef platform evolution. Quaternary Science Reviews, 231. 106155.

Murray, Nicholas J., Keith, David A., Duncan, Adam, Tizard, Robert, Ferrer-Paris, Jose R., Worthington, Thomas A., Armstrong, Kate, Hlaing, Nyan, Htut, Win Thuya, Oo, Aung Htat, Zay Ya, Kyaw, and Grantham, Hedley (2020) Myanmar's terrestrial ecosystems: status, threats and conservation opportunities. Biological Conservation, 252. 108834.

Waltham, Nathan J., McCann, Jack, Power, Trent, Moore, Matt, and Buelow, Christina (2020) Patterns of fish use in urban estuaries: engineering maintenance schedules to protect broader seascape habitat. Estuarine, Coastal and Shelf Science, 238. 106729.

Morgan, Kyle M., Perry, Chris T., Arthur, Rudy, Williams, Hywel T.P., and Smithers, Scott G. (2020) Projections of coral cover and habitat change on turbid reefs under future sea-level rise. Proceedings Of The Royal Society B-biological Sciences, 287 (1929). 20200541.

Waltham, Nathan J., Coleman, Laura, Buelow, Christina, Fry, Scott, and Burrows, Damien (2020) Restoring fish habitat values on a tropical agricultural floodplain: learning from two decades of aquatic invasive plant maintenance efforts. Ocean and Coastal Management, 198. 105355.

Buelow, Christina A., and Waltham, Nathan J. (2020) Restoring tropical coastal wetland water quality: ecosystem service provisioning by a native freshwater bivalve. Aquatic Sciences, 82. 77.

Jinks, Kristin I., Rasheed, Michael A., Brown, Christopher J., Olds, Andrew D., Schlacher, Thomas A., Sheaves, Marcus, York, Paul H., and Connolly, Rod M. (2020) Saltmarsh grass supports fishery food webs in subtropical Australian estuaries. Estuarine, Coastal and Shelf Science, 238. 106719.

Tan, Yi Mei, Dalby, Oliver, Kendrick, Gary A., Statton, John, Sinclair, Elizabeth A., Fraser, Matthew W., Macreadie, Peter I., Gillies, Chris L., Coleman, Rhys, Waycott, Michelle, van Dijk, Kor-Jent, Vergés, Adriana, Ross, Jeff D., Campbell, Marnie L., Matheson, Fleur E., Jackson, Emma L., Irving, Andrew D., Govers, Laura, Connolly, Rod M., McLeod, Ian M., Rasheed, Michael A., Kirkman, Hugh, Flindt, Morgens R., Lange, Troels, Miller, Adam D,, and Sherman, Craig D.H. (2020) Seagrass restoration is possible: insights and lessons from Australia and New Zealand. Frontiers in Marine Science, 7. 617.

Baker, Ronald, and Waltham, Nathan (2020) Tethering mobile aquatic organisms to measure predation: a renewed call for caution. Journal of Experimental Marine Biology and Ecology, 523. 151270.

Waltham, Nathan J., and Sheaves, Marcus (2020) Thermal exposure risks to mobile tropical marine snails: are eco-engineered rock pools on seawalls scale-specific enough for comprehensive biodiversity outcomes? Marine Pollution Bulletin, 156. 111237.

Waltham, Nathan J., Elliott, Michael, Lee, Shing Yip, Lovelock, Catherine, Duarte, Carlos M., Buelow, Christina, Simenstad, Charles, Nagelkerken, Ivan, Claassens, Louw, Wen, Colin K.-C., Barletta, Mario, Connolly, Rod, Gillies, Christopher, Mitsch, William, Ogburn, Matthew B., Purandare, Jemma, Possingham, Hugh, and Sheaves, Marcus (2020) UN decade on ecosystem restoration 2021-2020 - what chance for success in restoring coastal ecosystems? Frontiers in Marine Science, 7. 71. pp. 1-5.

Sheaves, Marcus, Abrantes, Katya, Barnett, Adam, Benham, Claudia, Dale, Patricia, Mattone, Carlo, Sheaves, Alison, Waltham, Nathan, and Bradley, Michael (2020) The consequences of paradigm change and poorly validated science: the example of the value of mangroves to fisheries. Fish and Fisheries, 21 (5). pp. 1067-1075.

Worthington, Thomas A., zu Ermgassen, Philine S.E., Friess, Daniel A., Krauss, Ken W., Lovelock, Catherine E., Thorley, Julia, Tingey, Rick, Woodroffe, Colin D., Bunting, Pete, Cormier, Nicole, Lagomasino, David, Lucas, Richard, Murray, Nicholas J., Sutherland, William J., and Spalding, Mark (2020) A global biophysical typology of mangroves and its relevance for ecosystem structure and deforestation. Scientific Reports, 10 (1). 14652.

Younes, Nicolas, Northfield, Tobin D., Joyce, Karen E., Maier, Stefan W., Duke, Norman C., and Lymburner, Leo (2020) A novel approach to modelling mangrove phenology from satellite images: a case study from Northern Australia. Remote Sensing, 12 (24). 4008.

Stieglitz, Thomas C., Dujon, Antoine M., Peel, Joanne, and Amice, Erwan (2020) The potential of marginal coastal nursery habitats for the conservation of a culturally important Caribbean marine species. Diversity and Distributions, 26 (5). pp. 565-574.

Wongbusarakum, Supin, Brown, Valerie, Loerzel, Adrienne, Gorstein, Matt, Kleiber, Danika, Quinata, Marybelle, Iwane, Mia, and Heenan, Adel (2019) Achieving social and ecological goals of coastal management through integrated monitoring. Journal of Applied Ecology, 56 (11). pp. 2400-2409.

Wu, Paul Pao-Yen, Mengersen, Kerrie, Caley, M. Julian, McMahon, Kathryn, Rasheed, Michael A., and Kendrick, Gary A. (2019) Analysing the dynamics and relative influence of variables affecting ecosystem responses using functional PCA and boosted regression trees: a seagrass case study. Methods in Ecology and Evolution, 10 (10). pp. 1723-1733.

Bradley, Michael, Baker, Ronald, Nagelkerken, Ivan, and Sheaves, Marcus (2019) Context is more important than habitat type in determining use by juvenile fish. Landscape Ecology, 34. pp. 427-442.

Bellwood, David R., Pratchett, Morgan S., Morrison, Tiffany H., Gurney, Georgina G., Hughes, Terry P., Álvarez-Romero, Jorge G., Day, Jon C., Grantham, Ruby, Grech, Alana, Hoey, Andrew S., Jones, Geoffrey P., Pandolfi, John M., Tebbett, Sterling B., Techera, Erika, Weeks, Rebecca, and Cumming, Graeme S. (2019) Coral reef conservation in the Anthropocene: confronting spatial mismatches and prioritizing functions. Biological Conservation, 236. pp. 604-615.

Amir, A. Aldrie, and Duke, Norman C. (2019) Distinct characteristics of canopy gaps in the subtropical mangroves of Moreton Bay, Australia. Estuarine, Coastal and Shelf Science, 222. pp. 66-80.

Dhanjal-Adams, Kiran L., Fuller, Richard A., Murray, Nicholas J., Studds, Colin E., Wilson, Howard B., Milton, David A., and Kendall, Bruce E. (2019) Distinguishing local and global correlates of population change in migratory species. Diversity and Distributions, 25 (5). pp. 797-808.

Dunn, Ryan J.K., Welsh, David T., Teasdale, Peter R., Gilbert, Franck, Poggiale, Jean-Christopher, and Waltham, Nathan J. (2019) Effects of the bioturbating marine yabby Trypaea australiensis on sediment properties in sandy sediments receiving mangrove leaf litter. Journal of Marine Science and Engineering, 7 (12). 426.

Jinks, Kristin I., Brown, Christopher J., Rasheed, Michael A., Scott, Abigail L., Sheaves, Marcus, York, Paul H., and Connolly, Rod M. (2019) Habitat complexity influences the structure of food webs in Great Barrier Reef seagrass meadows. Ecosphere, 10 (11). e02928.

Moneghetti, Joanne, Figueiredo, Joana, Baird, Andrew H., and Connolly, Sean R. (2019) High-frequency sampling and piecewise models reshape dispersal kernels of a common reef coral. Ecology, 100 (8). e02730.

Lal, Alvin, and Datta, Bithin (2019) Multi-objective groundwater management strategy under uncertainties for sustainable control of saltwater intrusion: solution for an island country in the South Pacific. Journal of Environmental Management, 234. pp. 115-130.

Jouffray, Jean Baptiste, Wedding, Lisa M., Norström, Albert V., Donovan, Mary K., Williams, Gareth J., Crowder, Larry B., Erickson, Ashley L., Friedlander, Alan M., Graham, Nicholas A.J., Gove, Jamison M., Kappel, Carrie V., Kittinger, John N., Lecky, Joey, Oleson, Kirsten L.L., Selkoe, Kimberly A., White, Crow, Williams, Ivor D., and Nyström, Magnus (2019) Parsing human and biophysical drivers of coral reef regimes. Proceedings of the Royal Society of London Series B, Biological Sciences, 286 (1896). 20182544.

Dubuc, Alexia, Waltham, Nathan J., Baker, Ronald, Marchand, Cyril, and Sheaves, Marcus (2019) Patterns of fish utilisation in a tropical IndoPacific mangrove-coral seascape, New Caledonia. PLoS ONE, 14 (4). e0207168.

Roycroft, Emily J., Le Port, Agnes, and Lavery, Shane D. (2019) Population structure and male-biased dispersal in the short-tail stingray Bathytoshia brevicaudata (Myliobatoidei: Dasyatidae). Conservation Genetics, 20 (4). pp. 717-728.

Andrisoa, Aladin, Stieglitz, Thomas C., Rodellas, Valenti, and Raimbault, Patrick (2019) Primary production in coastal lagoons supported by groundwater discharge and porewater fluxes inferred from nitrogen and carbon isotope signatures. Marine Chemistry, 210. pp. 48-60.

Duke, Norman C., Field, Colin, Mackenzie, Jock R., Meynecke, Jan-Olaf, and Wood, Apanie L. (2019) Rainfall and its possible hysteresis effect on the proportional cover of tropical tidal wetland mangroves and saltmarsh-saltpans. Marine and Freshwater Research, 70. pp. 1047-1055.

Skerratt, J.H., Mongin, M., Baird, M.E., Wild-Allen, K.A., Robson, Barbara, Schaffelke, Britta, Davies, C.H., Richardson, Anthony, Margvelashvili, N., Soja-Wozniak, M., and Steven, Andrew (2019) Simulated nutrient and plankton dynamics in the Great Barrier Reef (2011-2016). Journal of Marine Systems, 192. pp. 51-74.

Cinner, J.E., Lau, J.D., Bauman, A.G., Feary, D.A., Januchowski-Hartley, F.A., Rojas, C.A., Barnes, M.L., Bergseth, B.J., Shum, E., Lahari, R., Ben, J., and Graham, N.A.J. (2019) Sixteen years of social and ecological dynamics reveal challenges and opportunities for adaptive management in sustaining the commons. Proceedings of the National Academy of Sciences of the United States of America, 116 (52). pp. 26474-26483.

Duffy, J. Emmett, Benedetti-Cecchi, Lisandro, Trinanes, Joaquin, Muller-Karger, Frank E., Ambo-Rappe, Rohani, Boström, Christoffer, Buschmann, Alejandro H., Byrnes, Jarrett, Coles, Robert G., Creed, Joel, Cullen-Unsworth, Leanne C., Diaz-Pulido, Guillermo, Duarte, Carlos M., Edgar, Graham J., Fortes, Miguel, Goni, Gustavo, Hu, Chuanmin, Huang, Xiaoping, Hurd, Catriona L., Johnson, Craig, Konar, Brenda, Krause-Jensen, Dorte, Krumhansl, Kira, Macreadie, Peter, Marsh, Helene, McKenzie, Len J., Mieszkowska, Nova, Miloslavich, Patricia, Montes, Enrique, Nakaoka, Masahiro, Norderhaug, Kjell Magnus, Norlund, Lina M., Orth, Robert J., Prathep, Anchana, Putman, Nathan F., Samper-Villarreal, Jimena, Serrao, Ester A., Short, Frederick, Pinto, Isabel Sousa, Steinberg, Peter, Stuart-smith, Rick, Unsworth, Richard K.F., van Keulen, Mike, van Tussenbroek, Brigitta I., Wang, Mengqiu, Waycott, Michelle, Weatherdon, Lauren V., Wernberg, Thomas, and Yaakub, Siti Maryam (2019) Toward a coordinated global observing system for seagrasses and marine macroalgae. Frontiers in Marine Science, 6. 317. pp. 1-26.

Lau, Jacqueline D., Hicks, Christina C., Gurney, Georgina G., and Ginner, Joshua E. (2019) What matters to whom and why? Understanding the importance of coastal ecosystem services in developing coastal communities. Ecosystem Services, 35. pp. 219-230.

Murray, Nicholas J., Phinn, Stuart R., DeWitt, Michael, Ferrari, Renata, Johnston, Renee, Lyons, Mitchell B., Clinton, Nicholas, Thau, David, and Fuller, Richard A. (2019) The global distribution and trajectory of tidal flats. Nature, 565 (7738). pp. 222-225.

Bahadori, Mohammad, Chen, Chengrong, Lewis, Stephen, Rashti, Mehran Rezaei, Cook, Freeman, Parnell, Andrew, Esfandbod, Maryam, and Boyd, Sue (2019) A novel approach of combining isotopic and geochemical signatures to differentiate the sources of sediments and particulate nutrients from different land uses. Science of the Total Environment, 655. pp. 129-140.

Hernandez-Agreda, Alejandra, Leggat, William, and Ainsworth, Tracy D. (2019) A place for taxonomic profiling in the study of the coral prokaryotic microbiome. FEMS Microbiology Letters, 366 (6). fnz063.

Wolff, Nicholas H., Da Silva, Eduardo Teixeira, Devlin, Michelle, Anthony, Kenneth R.N., Lewis, Stephen, Tonin, Hemerson, Brinkman, Richard, and Mumby, Peter J. (2018) Contribution of individual rivers to Great Barrier Reef nitrogen exposure with implications for management prioritization. Marine Pollution Bulletin, 133. pp. 30-43.

Abrantes, Kátya G., Brunnschweiler, Juerg M., and Barnett, Adam (2018) You are what you eat: examining the effects of provisioning tourism on shark diets. Biological Conservation, 224. pp. 300-308.

Grech, Alana, Hanert, Emmanuel, McKenzie, Len, Rasheed, Michael, Thomas, Christopher, Tol, Samantha, Wang, Mingzhu, Waycott, Michelle, Wolter, Jolan, and Coles, Rob (2018) Predicting the cumulative effect of multiple disturbances on seagrass connectivity. Global Change Biology, 24 (7). pp. 3093-3104.

Howley, C., Devlin, M., and Burford, M. (2018) Assessment of water quality from the Normanby River catchment to coastal flood plumes on the northern Great Barrier Reef, Australia. Marine and Freshwater Research, 69 (6). pp. 859-873.

Choi, Chi-Yeung, Jackson, Micha V., Gallo-Cajiao, Eduardo, Murray, Nicholas J., Clemens, Robert S., Gan, Xiaojing, and Fuller, Richard A. (2018) Biodiversity and China's new Great Wall. Diversity and Distributions, 24 (2). pp. 137-143.

Harris, R.M.B., Beaumont, L.J., Vance, T.R., Tozer, C.R., Remenyi, T.A., Perkins-Kirkpatrick, S.E., Mitchell, P.J., Nicotra, A.B., McGregor, S., Andrew, N.R., Letnic, M., Kearney, M.R., Wernberg, T., Hutley, L.B., Chambers, L.E., Fletcher, M.-S., Keatley, M.R., Woodward, Clifford, Williamson, G., Duke, N.C., and Bowman, D.M.J.S. (2018) Biological responses to the press and pulse of climate trends and extreme events. Nature Climate Change, 8. pp. 579-587.

Duke, N.C., and Kudo, H. (2018) Bruguiera × dungarra, a new hybrid between mangrove species B. exaristata and B. gymnorhiza (Rhizophoraceae) recently discovered in north-east Australia. Blumea, 63. pp. 279-285.

Bland, Lucie M., Rowland, Jessica A., Regan, Tracey J., Keith, David A., Murray, Nicholas J., Lester, Rebecca E., Linn, Matt, Rodriguez, Jon Paul, and Nicholson, Emily (2018) Developing a standardized definition of ecosystem collapse for risk assessment. Frontiers in Ecology and the Environment, 16 (1). pp. 29-36.

Waltham, Nathan J., and Sheaves, Marcus (2018) Eco-engineering rock pools to a seawall in a tropical estuary: microhabitat features and fine sediment accumulation. Ecological Engineering, 120. pp. 631-636.

Wu, Paul Pao-Yen, McMahon, Kathryn, Rasheed, Michael A., Kendrick, Gary A., York, Paul H., Chartrand, Kathryn, Caley, M. Julian, and Mengersen, Kerrie (2018) Managing seagrass resilience under cumulative dredging affecting light: predicting risk using dynamic Bayesian networks. Journal of Applied Ecology, 55 (3). pp. 1339-1350.

Salmo, Severino G., Tibbetts, Ian R., and Duke, Norman C. (2018) Nekton communities as indicators of habitat functionality in Philippine mangrove plantations. Marine and Freshwater Research, 69 (3). pp. 477-485.

Egan, Joshua P., Bloom, Devin D., Kuo, Chien-Hsien, Hammer, Michael P., Tongnunui, Prasert, Iglésias, Samuel P., Sheaves, Marcus, Grudpan, Chaiwut, and Simons, Andrew M. (2018) Phylogenetic analysis of trophic niche evolution reveals a latitudinal herbivory gradient in Clupeoidei (herrings, anchovies, and allies). Molecular Phylogenetics and Evolution, 124. pp. 151-161.

Novic, Andrew Joseph, Ort, Christopher, O'Brien, Dominique S., Lewis, Stephen E., Davis, Aaron M., and Mueller, Jochen F. (2018) Understanding the uncertainty of estimating herbicide and nutrient mass loads in a flood event with guidance on estimator selection. Water Research, 132. pp. 99-110.

Caron, Alexandra G.M., Thomas, Colette R., Berry, Kathryn L.E., Motti, Cherie A., Ariel, Ellen, and Brodie, Jon E. (2018) Validation of an optimised protocol for quantification of microplastics in heterogenous samples: a case study using green turtle chyme. MethodsX, 5. pp. 812-823.

Zhang, Yu-Yang, McCook, Laurence, Jiang, Lei, Lian, Jian-Sheng, Liu, Sheng, and Huang, Hui (2018) An outbreak of sea cucumbers hinders coral recruitment. Coral Reefs, 37 (2). pp. 321-326.

Scott, Abigail L., York, Paul H., Duncan, Clare, Macreadie, Peter I., Connolly, Rod M., Ellis, Megan T., Jarvis, Jessie C., Jinks, Kristin I., Marsh, Helene, and Rasheed, Michael A. (2018) The role of herbivory in structuring tropical seagrass ecosystem service delivery. Frontiers in Plant Science, 9. 127.

Boyden, James, Wurm, Penelope, Joyce, Karen E., and Boggs, Guy (2018) A spatial vulnerability assessment of monsoonal wetland habitats to para grass invasion in Kakadu National Park, northern Australia. International Journal of Applied Earth Observation and Geoinformation, 71. pp. 43-55.

Phong, Nguyen Tan, Parnell, Kevin E., and Cottrell, Alison (2017) Human activities and coastal erosion on the Kien Giang coast, Vietnam. Journal of Coastal Conservation, 21 (6). pp. 967-979.

Younes Cárdenas, Nicolás, Joyce, Karen E., and Maier, Stefan W. (2017) Monitoring mangrove forests: are we taking full advantage of technology? International Journal of Applied Earth Observation and Geoinformation, 63. pp. 1-14.

Wu, Paul Pao-Yen, Mengersen, Kerrie, McMahon, Kathryn, Kendrick, Gary A., Chartrand, Katie, York, Paul H., Rasheed, Michael A., and Caley, M. Julian (2017) Timing anthropogenic stressors to mitigate their impact on marine ecosystem resilience. Nature Communications, 8. 1263.

Munsch, Stuart H., Cordell, Jeffery R., and Toft, Jason D. (2017) Effects of shoreline armouring and overwater structures on coastal and estuarine fish: opportunities for habitat improvement. Journal of Applied Ecology, 54 (5). pp. 1373-1384.

Waltham, Nathan J., and Sheaves, Marcus (2017) Acute thermal tolerance of tropical estuarine fish occupying a man-made tidal lake, and increased exposure risk with climate change. Estuarine, Coastal and Shelf Science, 196. pp. 173-181.

Rowen, David J., Templeman, Michelle A., and Kingsford, Michael J. (2017) Herbicide effects on the growth and photosynthetic efficiency of Cassiopea maremetens. Chemosphere, 182. pp. 143-148.

Brodersen, Kasper E., Hammer, Katherine J., Schrameyer, Verena, Floytrup, Anja, Rasheed, Michael, Ralph, Peter J., Kühl, Michael, and Pedersen, Ole (2017) Sediment resuspension and deposition on seagrass leaves impedes internal plant aeration and promotes phytotoxic H2S intrusion. Frontiers in Plant Science, 8. 657. pp. 1-13.

Ferrari, Renata, Figueira, Will F., Pratchett, Morgan S., Boube, Tatiana, Adam, Arne, Kobelkowsky-Vidrio, Tania, Doo, Steve S., Atwood, Trisha Brooke, and Byrne, Maria (2017) 3D photogrammetry quantifies growth and external erosion of individual coral colonies and skeletons. Scientific Reports, 7.

Duke, Norman (2017) Climate calamity along Australia's gulf coast. Landscape Architecture Australia, 153. pp. 66-71.

Salmo III, Severino G., Tibbetts, Ian, and Duke, Norman C. (2017) Colonization and shift of mollusc assemblages as a restoration indicator in planted mangroves in the Philippines. Biodiversity and Conservation, 26 (4). pp. 865-881.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, Langlois, Lucas, Ralph, Peter J., and Negri, Andrew P. (2017) Combined effects of temperature and the herbicide diuron on Photosystem II activity of the tropical seagrass Halophila ovalis. Scientific Reports, 7. 45404. pp. 1-11.

Petit, Graciela Pulido, Wildermann, Natalie, and Barrios Garrido, Hector (2017) Comunidades de macroinvertebrados asociadas a piscinas de marea del litoral rocoso Punta Perret, estado Zulia, Venezuela // Macroinvertebrates community's structure associated to tide pools in the rocky shore of Punta Perret, Zulia State, Venezuela. Ciencia, 25 (1). pp. 15-28.

Van Oosterzee, Penny, and Duke, Norman (2017) Extreme weather likely behind worst recorded mangrove dieback in northern Australia. The Conversation, 14 March 2017. pp. 1-6.

Sheaves, Marcus (2017) How many fish use mangroves? The 75% rule an ill-defined and poorly validated concept. Fish and Fisheries, 18 (4). pp. 778-789.

York, Paul H., Smith, Timothy M., Coles, Rob G., McKenna, Skye A., Connolly, Rod M., Irving, Andrew D., Jackson, Emma L., McMahon, Kathryn, Runcie, John W., Sherman, Craig D.H., Sullivan, Brooke K., Trevathan-Tackett, Stacy M., Brodersen, Kasper E., Carter, Alex B., Ewers, Carolyn J., Lavery, Paul S., Roelfsema, Chris M., Sinclair, Elizabeth A., Strydom, Simone, Tanner, Jason E., van Dijk, Kor-jent, Warry, Fiona Y., Waycott, Michelle, and Whitehead, Sam (2017) Identifying knowledge gaps in seagrass research and management: an Australian perspective. Marine Environmental Research, 127. pp. 163-172.

Melbourne-Thomas, Jessica, Constable, Andrew J., Fulton, Elizabeth A., Corney, Stuart P., Trebilco, Rowan, Hobday, Alistair J., Blanchard, Julia L., Boschetti, Fabio, Bustamante, Rodrigo H., Cropp, Roger, Everett, Jason D., Fleming, Aysha, Galton-Fenzi, Ben, Goldsworthy, Simon D., Lenton, Andrew, Lara-Lopez, Ana, Little, Rich, Marzloff, Martin P., Matear, Richard, Mongin, Mathieu, Plagányi, Eva, Proctor, Roger, Risbey, James S., Robson, Barbara J., Smith, David C., Sumner, Michael D., and van Putten, E. Ingrid (2017) Integrated modelling to support decision-making for marine social-ecological systems in Australia. ICES Journal of Marine Science, 74 (9). pp. 2298-2308.

Duke, Norman C., Kovacs, John M., Griffiths, Anthony D., Preece, Luke, Hill, Duncan J. E., Van Oosterzee, Penny, Mackenzie, Jock, Morning, Hailey S., and Burrows, Damien (2017) Large-scale dieback of mangroves in Australia’s Gulf of Carpentaria: a severe ecosystem response, coincidental with an unusually extreme weather event. Marine and Freshwater Research, 68 (10). MF16322. pp. 1816-1829.

Duke, Norman (2017) Love at low tide: why mangroves deserve our admiration. Wildlife Australia, 54 (3). pp. 29-33.

Nguyen, Phong Tan, Luom, Thai Thanh, and Parnell, Kevin E. (2017) Mangrove transplantation in Brebes Regency, Indonesia: lessons and recommendations. Ocean & Coastal Management, 149. pp. 12-21.

Novic, Andrew Joseph, O'Brien, Dominique S., Kaserzon, Sarit L., Hawker, Darryl W., Lewis, Stephen E., and Mueller, Jochen F. (2017) Monitoring herbicide concentrations and loads during a flood event: a comparison of grab sampling with passive sampling. Environmental Science and Technology, 51 (7). pp. 3880-3891.

Brodie, Jon, Devlin, Michelle, and Lewis, Stephen (2017) Potential enhanced survivorship of crown of thorns starfish larvae due to near-annual nutrient enrichment during secondary outbreaks on the central mid-shelf of the Great Barrier Reef, Australia. Diversity, 9 (17).

Benzeev, Rayna, Hutchinson, Neil, and Friess, Daniel A. (2017) Quantifying fisheries ecosystem services of mangroves and tropical artificial urban shorelines. Hydrobiologia, 803 (1). pp. 225-237.

Harvey, Nick, Dew, Romana E.C., and Hender, Sarah (2017) Rapid land use change by coastal wind farm development: Australian policies, politics and planning. Land Use Policy, 61. pp. 368-378.

Studds, Colin E., Kendall, Bruce E., Murray, Nicholas J., Wilson, Howard B., Rogers, Danny I., Clemens, Robert S., Gosbell, Ken, Hassell, Chris J., Jessop, Rosalind, Melville, David S., Milton, David A., Minton, Clive D.T., Possingham, Hugh P., Riegen, Adrian C., Straw, Phil, Woehler, Eric J., and Fuller, Richard A. (2017) Rapid population decline in migratory shorebirds relying on Yellow Sea tidal mudflats as stopover sites. Nature Communications, 8. 14895.

Brodie, Jon E., Lewis, Stephen E., Collier, Catherine J., Wooldridge, Scott, Bainbridge, Zoe, Waterhouse, Jane, Rasheed, Michael, Honchin, Carol, Holmes, Glen, and Fabricius, Katharina (2017) Setting ecologically relevant targets for river pollutant loads to meet marine water quality requirements for the Great Barrier Reef, Australia: a preliminary methodology and analysis. Ocean & Coastal Management, 143. pp. 136-147.

Dunn, Ryan J.K., Waltham, Nathan, Teasdale, Peter R., Roberston, David, and Welsh, David T. (2017) Short-term nitrogen and phosphorus release during the disturbance of surface sediments: a case study in an urbanised estuarine system (Gold Coast Broadwater, Australia). Journal of Marine Science and Engineering, 5 (2). pp. 1-13.

Cooper, Michelle, Lewis, Stephen E., and Smithers, Scott G. (2017) Spatial and temporal dynamics of suspended sediment causing persistent turbidity in a large reservoir: Lake Dalrymple, Queensland, Australia. Marine and Freshwater Research, 68 (7). pp. 1377-1390.

Warnakulasooriya, Kanchana Niwanthi, Butler, Edward Charles Villers, Gibb, Karen Susanne, and Munksgaard, Niels Crosley (2017) Stable isotopes in biota reflect the graduated influence of sewage effluent along a tropical macro-tidal creek. Marine and Freshwater Research, 68 (10). pp. 1855-1866.

Bland, Lucie M., Regan, Tracey J., Dinh, Minh Ngoc, Ferrari, Renata, Keith, David A., Lester, Rebecca, Mouillot, David, Murray, Nicholas J., Nguyen, Hoang Anh, and Nicholson, Emily (2017) Using multiple lines of evidence to assess the risk of ecosystem collapse. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1863). 20170660.

Stieglitz, Thomas C., and Dujon, Antoine M. (2017) A groundwater-fed coastal inlet as habitat for the Caribbean queen conch Lobatus gigas—an acoustic telemetry and space use analysis. Marine Ecology Progress Series, 571. pp. 139-152.

Mustika, Putu, Welters, Riccardo, Ryan, Gerard Edward, D'Lima, Coralie, Sorongon-Yap, Patricia, Jutapruet, Suwat, and Peter, Cindy (2017) A rapid assessment of wildlife tourism risk posed to cetaceans in Asia. Journal of Sustainable Tourism, 25 (8). pp. 1138-1158.

Li, Xinnian, Duke, Norman C., Yang, Yuchen, Huang, Lishi, Zhu, Yuxiang, Zhang, Zhang, Zhou, Renchao, Zhong, Cairong, Huang, Yelin, and Sia, Suhua (2016) Re-evaluation of phylogenetic relationships among species of the mangrove genus Avicennia from Indo-West Pacific based on multilocus analyses. PLoS ONE, 11 (10). e0164453. pp. 1-14.

Rogers, Kerrylee, Boon, Paul I., Branigan, Simon, Duke, Norman C., Field, Colin D., Fitzsimons, James A., Kirkman, Hugh, Mackenzie, Jock R., and Saintilan, Neil (2016) The state of legislation and policy protecting Australia's mangrove and salt marsh and their ecosystem services. Marine Policy, 72. pp. 139-155.

Yan, Yu-Bin, Duke, Norm C., and Sun, Mei (2016) Comparative analysis of the pattern of population genetic diversity in three Indo-West Pacific Rhizophora mangrove species. Frontiers in Plant Science, 7. 1434. pp. 1-17.

Serrano, Oscar, Lavery, Paul S., Duarte, Carlos M., Kendrick, Gary A., Calafat, Antoni, York, Paul H., Steven, Andy, and Macreadie, Peter I. (2016) Can mud (silt and clay) concentration be used to predict soil organic carbon content within seagrass ecosystems? Biogeosciences, 13. pp. 4915-4926.

Brandl, Simon J., and Bellwood, David R. (2016) Microtopographic refuges shape consumer‑producer dynamics by mediating consumer functional diversity. Oecologia, 182 (1). pp. 203-217.

Smith, Timothy M., York, Paul H., Macreadie, Peter I., Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2016) Spatial variation in reproductive effort of a southern Australian seagrass. Marine Environmental Research, 120. pp. 214-224.

Gladish, Daniel W., Kuhnert, Petra M., Pagendam, Daniel E., Wikle, Christopher K., Bartley, Rebecca, Searle, Ross D., Ellis, Robin J., Dougall, Cameron, Turner, Ryan D.R., Lewis, Stephen E., Bainbridge, Zoe T., and Brodie, Jon E. (2016) Spatio-temporal assimilation of modelled catchment loads with monitoring data in the Great Barrier Reef. Annals of Applied Statistics, 10 (3). pp. 1590-1618.

Ryan, E.J., Smithers, S.G., Lewis, S.E., Clark, T.R., and Zhao, J.X. (2016) The influence of sea level and cyclones on Holocene reef flat development: Middle Island, central Great Barrier Reef. Coral Reefs, 35 (3). pp. 805-818.

Duke, Norman C. (2016) Oil spill impacts on mangroves: recommendations for operational planning and action based on a global review. Marine Pollution Bulletin, 109 (2). pp. 700-715.

Collier, C.J., Adams, M.P., Langlois, L., Waycott, M., O'Brien, K.R., Maxwell, P.S., and McKenzie, L. (2016) Thresholds for morphological response to light reduction for four tropical seagrass species. Ecological Indicators, 67. pp. 358-366.

Caronni, Sarah, Delaria, Maria Anna, Heimann, Kirsten, Macri, Giovanni, Navone, Augusto, Panzalis, Pieraugusto, and Ceccherelli, G (2016) The role of floating mucilage in the invasive spread of the benthic microalga Chrysophaeum taylorii. Marine Ecology, 37 (4). pp. 867-876.

Sheaves, Marcus, Sporne, Ilva, Dichmont, Catherine M., Bustamante, Rodrigo, Dale, Pat, Deng, Roy, Dutra, Leo X.C., van Putten, Ingrid, Savina-Rollan, Marie, and Swinbourne, Anne (2016) Principles for operationalizing climate change adaptation strategies to support the resilience of estuarine and coastal ecosystems: an Australian perspective. Marine Policy, 68. pp. 229-240.

Lewis, Stephen E., Silburn, D. Mark, Kookana, Rai S., and Shaw, Melanie (2016) Pesticide behavior, fate, and effects in the Tropics: an overview of the current state of knowledge. Journal of Agricultural and Food Chemistry, 64 (20). pp. 3917-3924.

Dichmont, Catherine M., Dutra, Leo X.C., Owens, Randall, Jebreen, Eddie, Thompson, Carolyn, Deng, Roy A., van Putten, Elizabeth I., Pascual, Ricardo, Dambacher, Jeffrey M., Warne, Michael St.J., Quinn, Ross H., Thébaud, Olivier, Bennett, John, Read, Mark, Wachenfeld, David, Davies, Julia, Garland, Anna, Dunning, Malcolm, Collier, Catherine, Waycott, Michelle, and Playford, Julia (2016) A generic method of engagement to elicit regional coastal management options. Ocean & Coastal Management, 124. pp. 22-32.

Sheaves, Marcus (2016) Simple processes drive unpredictable differences in estuarine fish assemblages: baselines for understanding site-specific ecological and anthropogenic impacts. Estuarine, Coastal and Shelf Science , 170. pp. 61-69.

Smith, Timothy M., York, Paul H., Macreadie, Peter I., Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2016) Recovery pathways from small scale disturbance in a temperate Australian seagrass. Marine Ecology Progress Series, 542. pp. 97-108.

Nguyen, T.P., Nguyen, Van Tam, Le, Phat Quoi, and Parnell, Kevin E. (2016) Community perspectives on an internationally funded mangrove restoration project: Kien Giang province, Vietnam. Ocean & Coastal Management, 119. pp. 146-154.

Yang, Yuchen, Duke, Norman C., Peng, Fangfang, Li, Jianfang, Yang, Shuhuan, Zhong, Cairong, Zhou, Renchao, and Shi, Suhua (2016) Ancient geograpical barriers drive differentiation among Sonneratia caseolaris populations and recent divergence from S. Ianceolata. Frontiers in Plant Science, 7. 1618. pp. 1-14.

Sheaves, Janine, Dingle, Liliana, and Mattone, Carlo (2016) Biotic hotspots in mangrove-dominated estuaries: macro-invertebrate aggregation in unvegetated lower intertidal flats. Marine Ecology Progress Series, 556. pp. 31-43.

Cooper, W.E., Kudo, H., and Duke, Norman C. (2016) Bruguiera hainesii C.G.Rogers (Rhizophoraceae), an endangered species recently discovered in Australia. Austrobaileya, 9 (4). pp. 481-488.

Harvey, Nick, and Dew, Romana E.C. (2016) Coastal impact of onshore wind farms in Australia. Journal of Coastal Research, 75. pp. 992-996.

Clemens, Robert S., Rogers, Danny I., Hansen, Birgita D., Gosbell, Ken, Minton, Clive D.T., Straw, Phil, Bamford, Mike, Woehler, Eric J., Milton, David A., Weston, Michael A., Venables, Bill, Weller, Dan, Hassell, Chris, Rutherford, Bill, Onton, Kimberly, Herrod, Ashley, Studds, Colin E., Choi, Chi Yeung, Dhanjal-adams, Kiran L., Murray, Nicholas J., Skilleter, Gregory A., and Fuller, Richard A. (2016) Continental-scale decreases in shorebird populations in Australia. Emu, 116 (2). pp. 119-135.

Pascoe, Sean, Tobin, Renae, Windle, Jill, Cannard, Toni, Marshall, Nadine, Kabir, Zobaidul, and Flint, Nicole (2016) Developing a social, cultural and economic report card for a regional industrial harbour. PLoS ONE, 11 (2). e0148271. pp. 1-19.

Poulos, Davina E., Gallen, Christopher, Davis, Tom, Booth, David J., and Harasti, David (2016) Distribution and spatial modelling of a soft coral habitat in the Port Stephens-Great Lakes Marine Park: implications for management. Marine and Freshwater Research, 67 (2). pp. 256-265.

Nash, Kirsty L., and Graham, Nicholas A.J. (2016) Ecological indicators for coral reef fisheries management. Fish and Fisheries, 17 (4). pp. 1029-1054.

Sheaves, Marcus, Coles, Rob, Dale, Pat, Grech, Alana, Pressey, Robert L., and Waltham, Nathan J. (2016) Enhancing the value and validity of EIA: serious science to protect Australia's Great Barrier Reef. Conservation Letters, 9 (5). pp. 377-383.

Petus, Caroline, Devlin, Michelle, Thompson, Angus, McKenzie, Len, Da Silva, Eduardo Teixeira, Collier, Catherine, Tracey, Dieter, and Martin, Katherine (2016) Estimating the exposure of coral reefs and seagrass meadows to land-sourced contaminants in river flood plumes of the Great Barrier Reef: validating a simple satellite risk framework with environmental data. Remote Sensing, 8 (3). 210.

Sheaves, Marcus, Baker, Ronnie, Abrantes, Kátya G., and Connolly, Rod M. (2016) Fish biomass in tropical estuaries: substantial variation in food web structure, sources of nutrition and ecosystem-supporting processes. Estuaries and Coasts, 40 (2). pp. 580-593.

MacMillan, Hamish, Moore, Antoni, Augé, Amélie A., and Chilvers, B. Louise (2016) GIS-based multi-criteria analysis of breeding habitats for recolonising species: New Zealand sea lions. Ocean and Coastal Management, 130. pp. 162-171.

Guo, Zixiao, Huang, Yelin, Chen, Yongmei, Duke, Norman C., Zhong, Cairong, and Shi, Sugua (2016) Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region. Journal of Biogeography, 43. pp. 1856-1868.

Jimenez, Haizea, Dumas, Pascal, Mouillot, David, Bigot, Lionel, and Ferraris, Jocelyne (2016) Harvesting effects on functional structure and composition of tropical invertebrate assemblages. ICES Journal of Marine Science, 73 (2). pp. 420-428.

Vermeiren, P., Munoz, C., Zimmer, M., and Sheaves, M. (2016) Hierarchical toolbox: ensuring scientific accuracy of citizen science for tropical coastal ecosystems. Ecological Indicators, 66. pp. 242-250.

Leonard, Nicole D., Zhao, J-x, Welsh, K.J., Feng, Y-x, Smithers, S.G., Pandolfi, J.M., and Clark, T.R. (2016) Holocene sea level instability in the southern Great Barrier Reef, Australia: high-precision U-Th dating of fossil microatolls. Coral Reefs, 35 (2). pp. 625-639.

Lau, Jacqueline D., and Scales, Ivan R. (2016) Identity, subjectivity and natural resource use: how ethnicity, gender and class intersect to influence mangrove oyster harvesting in The Gambia. Geoforum, 69. pp. 136-146.

Last, K.S., Hendrick, V.J., Beveridge, C.M., Roberts, D.A., and Wilding, T.A. (2016) Lethal and sub-lethal responses of the biogenic reef forming polychaete Sabellaria alveolata to aqueous chlorine and temperature. Marine Environmental Research, 117. pp. 44-53.

Chartrand, Kathryn M., Bryant, Catherine V., Carter, Alexandra B., Ralph, Peter J., and Rasheed, Michael A. (2016) Light thresholds to prevent dredging impacts on the Great Barrier Reef seagrass, Zostera muelleri ssp. capricorni. Frontiers in Marine Science, 3. 106.

Stocker, L., Harvey, N., and Metcalf, S.J. (2016) Management of coastal canal estates in Australia: challenges and opportunities. Ocean and Coastal Management, 130. pp. 148-161.

Nguyen, T.P., Tong, V.A., Quoi, L.P., and Parnell, K.E. (2016) Mangrove restoration: establishment of a mangrove nursery on acid sulphate soils. Journal of Tropical Forest Science, 28 (3). pp. 275-284.

Pernice, Mathieu, Sinutok, Sutinee, Sablok, Gaurav, Commault, Audrey S., Schliep, Martin, Macreadie, Peter I., Rasheed, Michael A., and Ralph, Peter J. (2016) Molecular physiology reveals ammonium uptake and related gene expression in the seagrass Zostera muelleri. Marine Environmental Research, 122. pp. 126-134.

Benham, Claudia F., and Daniell, Katherine A. (2016) Putting transdisciplinary research into practice: a participatory approach to understanding change in coastal social-ecological systems. Ocean & Coastal Management, 128. pp. 29-39.

Mackenzie, Jock R., Duke, Norman C., and Wood, Apanie L. (2016) The Shoreline Video Assessment Method (S-VAM): using dynamic hyperlapse image acquisition to evaluate shoreline mangrove forest structure, values, degradation and threats. Marine Pollution Bulletin, 109 (2). pp. 751-763.

Melland, Alice R., Silburn, D. Mark, McHugh, Allen D., Fillols, Emilie, Rojas-Ponce, Samuel, Baillie, Craig, and Lewis, Stephen (2016) Spot spraying reduces herbicide concentrations in runoff. Journal of Agricultural and Food Chemistry, 60 (20). pp. 4009-4020.

Whittock, Paul, Pendoley, Kellie L., and Hamann, Mark (2016) Using habitat suitability models in an industrial setting: the case for internesting flatback turtles. Ecosphere, 7 (11). pp. 1-19.

D'Lima, Coralie, Welters, Riccardo, Hamann, Mark, and Marsh, Helene (2016) Using regional geographic scale substitution to value coastal wildlife tourism: implications for stakeholders, conservation and management. Ocean & Coastal Management, 128. pp. 52-60.

Baird, Mark E., Adams, Matthew P., Babcock, Russell C., Oubelkheir, Kadija, Mongin, Mathieu, Wild-Allen, Karen A., Skerratt, Jennifer, Robson, Barbara J., Petrou, Katherina, Ralph, Peter J., O’Brien, Katherine R., Carter, Alex B., Jarvis, Jessie C., and Rasheed, Michael A. (2016) A biophysical representation of seagrass growth for application in a complex shallow-water biogeochemical model. Ecological Modelling, 325. pp. 13-27.

Sheaves, M., Baker, R., McLeod, I., Abrantes, K., Wani, J., and Barnett, A. (2016) The conservation status of Niugini black bass: a world-renowned sport fish with an uncertain future. Fisheries Management and Ecology, 23 (3-4). pp. 243-252.

Dhanjal-adams, Kiran L., Hanson, Jeffrey O., Murray, Nicholas J., Phinn, Stuart R., Wingate, Vladimir R., Mustin, Karen, Lee, Jasmine R., Allan, James R., Cappadonna, Jessica L., Studds, Colin E., Clemens, Robert S., Roelfsema, Chris M., and Fuller, Richard A. (2016) The distribution and protection of intertidal habitats in Australia. Emu, 116 (2). pp. 208-214.

Jones, K., Ariel, E., Burgess, G., and Read, M. (2016) A review of fibropapillomatosis in green turtles (Chelonia mydas). The Veterinary Journal, 212. pp. 48-57.

Malerba, Martino E., Connolly, Sean R., and Heimann, Kirsten (2015) An experimentally validated nitrate–ammonium–phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake. Ecological Modelling, 317. pp. 30-40.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, and Negri, Andrew P. (2015) Acute and additive toxicity of ten photosystem-II herbicides to seagrass. Scientific Reports, 5. 17443. pp. 1-11.

Schliep, M., Pernice, M., Sinutok, S., Bryant, C.V., York, P.H., Rasheed, M.A., and Ralph, P.J. (2015) Evaluation of reference genes for RT-QPCR studies in the seagrass Zostera muelleri exposed to light limitation. Scientific Reports, 5. 17051. pp. 1-11.

Ricart, Aurora M., York, Paul H., Rasheed, Michael A., Pérez, Marta, Romero, Javier, Bryant, Catherine V., and Macreadie, Peter I. (2015) Variability of sedimentary organic carbon in patchy seagrass landscapes. Marine Pollution Bulletin, 100 (1). pp. 476-482.

Heenkenda, Muditha K., Joyce, Karen E., Maier, Stefan W., and de Bruin, Sytze (2015) Quantifying mangrove chlorophyll from high spatial resolution imagery. ISPRS Journal of Photogrammetry and Remote Sensing, 108. pp. 234-244.

Baena, Martha L., Escobar, Federico, Halffter, Gonzalo, and García–Chávez, Juan H. (2015) Distribution and feeding behavior of Omorgus suberosus (Coleoptera: Trogidae) in Lepidochelys olivacea turtle nests. PLoS ONE, 10 (9). e0139538.

Connolly, Rod M., and Waltham, Nathan J. (2015) Spatial analysis of carbon isotopes reveals seagrass contribution to fishery food web. Ecosphere, 6 (9). 148. pp. 1-12.

Dafforn, Katherine A., Mayer-Pinto, Mariana, Morris, Rebecca L., and Waltham, Nathan J. (2015) Application of management tools to integrate ecological principles with the design of marine infrastructure. Journal of Environmental Management, 158. pp. 61-73.

Caronni, Sarah, Bresciani, Alessia, Delaria, Maria Anna, Meloni, Federico, Navone, Augusto, Panzalis, Pieraugusto, Heimann, Kirsten, and Ceccherelli, Giulia (2015) Ecology of the benthic mucilage-forming microalga Chrysophaeum taylorii in the W Mediterranean Sea: substratum and depth preferences. Estuarine, Coastal and Shelf Science , 161. pp. 38-45.

Negri, Andrew P., Flores, Florita, Mercurio, Phil, Mueller, Jochen F., and Collier, Catherine J. (2015) Lethal and sub-lethal chronic effects of the herbicide diuron on seagrass. Aquatic Toxicology, 165. pp. 73-83.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding coastal urban and industrial seascape in the Great Barrier Reef World Heritage Area: critical need for coordinated planning and policy. Marine Policy, 57. pp. 78-84.

Bartley, Rebecca, Croke, Jacky, Bainbridge, Zoe T., Austin, Jenet M., and Kuhnert, Petra M. (2015) Combining contemporary and long-term erosion rates to target erosion hot-spots in the Great Barrier Reef, Australia. Anthropocene, 10. pp. 1-12.

Abrantes, Kátya G., Barnett, Adam, Baker, Ronald, and Sheaves, Marcus (2015) Habitat-specific food webs and trophic interactions supporting coastal-dependent fishery species: an Australian case study. Reviews in Fish Biology and Fisheries, 25 (2). pp. 337-363.

Heenkenda, Muditha K., Joyce, Karen E., and Maier, Stefan W. (2015) Mangrove tree crown delineation from high-resolution imagery. Photogrammetric Engineering & Remote Sensing, 81 (6). pp. 471-479.

Hettiarachchi, Missaka, Morrison, T.H., and McAlpine, Clive (2015) Forty-three years of Ramsar and urban wetlands. Global Environmental Change, 32. pp. 57-66.

Weeks, Scarla J., Magno-Canto, Marites M., Jaine, Fabrice R.A., Brodie, Jon, and Richardson, Anthony J. (2015) Unique sequence of events triggers manta ray feeding frenzy in the Southern Great Barrier Reef, Australia. Remote Sensing, 7 (3). pp. 3138-3152.

McKenna, Skye, Jarvis, Jessie, Sankey, Tonia, Reason, Carissa, Coles, Robert, and Rasheed, Michael (2015) Declines of seagrasses in a tropical harbour, North Queensland, Australia, are not the result of a single event. Journal of Biosciences, 40 (2). pp. 389-398.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding urban and industrial development in tropical seascapes necessitates green engineering and spatial planning thinking. Environmental Science and Technology, 49 (5). pp. 2598-2599.

Janssen, Annette B.G., Arhonditsis, George B., Beusen, Arthur, Bolding, Karsten, Bruce, Louise, Bruggeman, Jorn, Couture, Raoul-Marie, Downing, Andrea S., Elliott, J. Alex, Frassl, Marieke A., Gal, Gideon, Gerla, Daan J., Hipsey, Matthew R., Hu, Fenjuan, Ives, Stephen C., Janse, Jan H., Jeppesen, Erik, Joehnk, Klaus D., Kneis, David, Kong, Xiangzhen, Kuiper, Jan J., Lehmann, Moritz K., Lemmen, Carsten, Ozkundakci, Deniz, Petzoldt, Thomas, Rinke, Karsten, Robson, Barbara J., Sachse, Rene, Schep, Sebastiaan A., Schmid, Martin, Scholten, Huub, Teurlincx, Sven, Trolle, Dennis, Troost, Tineke A., Van Dam, Anne A., Van Gerven, Luuk P. A., Weijerman, Mariska, Wells, Scott A., and Mooij, Wolf M. (2015) Exploring, exploiting and evolving diversity of aquatic ecosystem models: a community perspective. Aquatic Ecology, 49 (4). pp. 513-548.

Baker, Ronald, Sheaves, Marcus, and Johnston, Ross (2015) Geographic variation in mangrove flooding and accessibility for fishes and nektonic crustaceans. Hydrobiologia, 762 (1). pp. 1-14.

Rajamani, Leela, and Marsh, Helene (2015) Mapping seagrass cost-effectively in the Coral Triangle: Sabah, Malaysia as a case study. Pacific Conservation Biology, 21 (2). pp. 113-121.

Templeman, Michelle A., and Kingsford, Michael J. (2015) Predicting aqueous copper and zinc accumulation in the upside-down jellyfish Cassiopea maremetens through the use of biokinetic models. Environmental Monitoring and Assessment, 187 (416). pp. 1-8.

Robson, Barbara J., and Dourdet, Vincent (2015) Prediction of sediment, particulate nutrient and dissolved nutrient concentrations in a dry tropical river to provide input to a mechanistic coastal water quality model. Environmental Modelling & Software, 63. pp. 97-108.

Hughes, Terry P., Day, Jon C., and Brodie, Jon (2015) Securing the future of the Great Barrier Reef. Nature Climate Change, 5. pp. 508-511.

Murray, Nicholas J., Ma, Zhijun, and Fuller, Richard A. (2015) Tidal flats of the Yellow Sea: a review of ecosystem status and anthropogenic threats. Austral Ecology, 40 (4). pp. 472-481.

Bell, Justine, Saunders, Megan I., Leon, Javier X., Mills, Morena, Kythreotis, Andrew, Phinn, Stuart, Mumby, Peter, Lovelock, Catherine E., Hoegh-Guldberg, Ove, and Morrison, T.H. (2014) Maps, laws and planning policy: working with biophysical and spatial uncertainty in the case of sea level rise. Environmental Science & Policy, 44. pp. 247-257.

Perry, C.T., Smithers, S.G., Kench, P.S., and Pears, B. (2014) Impacts of Cyclone Yasi on nearshore, terrigenous sediment-dominated reefs of the central Great Barrier Reef, Australia. Geomorphology, 222. pp. 92-105.

Kamrowski, Ruth L., Limpus, Colin, Jones, Rhondda, Anderson, Sharolyn, and Hamann, Mark (2014) Temporal changes in artificial light exposure of marine turtle nesting areas. Global Change Biology, 20. pp. 2437-2449.

Petus, Caroline, Collier, Catherine, Devlin, Michelle, Rasheed, Michael, and McKenna, Skye (2014) Using MODIS data for understanding changes in seagrass meadow health: a case study in the Great Barrier Reef (Australia). Marine Environmental Research, 98. 68- 85.

Sheaves, Marcus, Brookes, Justin, Coles, Robert, Freckelton, Marnie, Groves, Paul, Johnston, Ross, and Wingberg, Pia (2014) Repair and revitalisation of Australia's tropical estuaries and coastal wetlands: opportunities and constraints for the reinstatement of lost function and productivity. Marine Policy, 47. pp. 23-38.

Trave, Claudia, and Sheaves, Marcus (2014) Bimini Islands: a characterization of the two major nursery areas; status and perspectives. SpringerPlus, 3. 270. pp. 1-9.

Brodie, Jon (2014) Dredging the Great Barrier Reef: use and misuse of science. Estuarine, Coastal and Shelf Science , 142. pp. 1-3.

Jarvis, Jessie C., Brush, Mark J., and Moore, Kenneth A. (2014) Modeling loss and recovery of Zostera marina beds in the Chesapeake Bay: the role of seedlings and seed-bank viability. Aquatic Botany, 113. pp. 32-45.

Van Bressem, Marie-Francoise, Minton, Gianna, Sutaria, Dipani, Kelkar, Nachiket, Peter, Cindy, Zulkarnaen, Mohammad, Mansur, Rubaiyat M., Porter, Lindsay, Vargas, Luz H. Rodriguez, and Rajamani, Leela (2014) Cutaneous nodules in Irrawaddy dolphins: an emerging disease in vulnerable populations. Diseases of Aquatic Organisms, 107 (3). pp. 181-189.

Andutta, Fernando P., Ridd, Peter V., Deleersnijder, Eric, and Prandle, David (2014) Contaminant exchange rates in estuaries: new formulae accounting for advection and dispersion. Progress in Oceanography, 120. pp. 139-153.

Rasheed, Michael A., McKenna, Skye A., Carter, Alexandra B., and Coles, Robert G. (2014) Contrasting recovery of shallow and deep water seagrass communities following climate associated losses in tropical north Queensland, Australia. Marine Pollution Bulletin, 83. pp. 491-499.

Larson, Silva, Farr, Marina, Stoeckl, Natalie, Chacon, Adriana, and Esparon, Michelle (2014) Does participation in outdoor activities determine residents' appreciation of nature: a case study from the Great Barrier Reef, Australia. Environment and Natural Resources Research, 4 (3). pp. 211-226.

Kumar, Lalit, Sinha, Priyakant, and Taylor, Subhashni (2014) Improving image classification in a complex wetland ecosystem through image fusion techniques. Journal of Applied Remote Sensing, 8. 083616.

Heenkenda, Muditha K., Joyce, Karen E., Maier, Stefan W., and Bartolo, Renee (2014) Mangrove species identification: comparing WorldView-2 with aerial photographs. Remote Sensing, 6. pp. 6064-6088.

Macreadie, P.I., Schliep, M.T., Rasheed, M.A., Chartrand, K.M., and Ralph, P.J. (2014) Molecular indicators of chronic seagrass stress: A new era in the management of seagrass ecosystems? Ecological Indicators, 38. pp. 279-281.

Macreadie, Peter I., York, Paul H., Sherman, Craig D.H., Keough, Michael J., Ross, D. Jeff, Ricart, Aurora M., and Smith, Timothy M. (2014) No detectable impact of small‑scale disturbances on 'blue carbon' within seagrass beds. Marine Biology, 161 (12). pp. 2939-2944.

Gal, Gideon, Hipsey, Matthew, Rinke, Karsten, and Robson, Barbara (2014) Novel approaches to address challenges in modelling aquatic ecosystems. Environmental Modelling and Software, 61. pp. 246-248.

Sheaves, Marcus, Sheaves, Janine, Stegemann, Krista, and Molony, Brett (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Marine and Freshwater Research, 65 (2). pp. 114-123.

Waltham, Nathan J., Reichelt-Brushett, Amanda, McCann, Damian, and Eyre, Bradley D. (2014) Water and sediment quality, nutrient biochemistry and pollution loads in an urban freshwater lake: balancing human and ecological services. Environmental Science Processes and Impacts, 16 (12). pp. 2804-2813.

Sardá, Rafael, O'Higgins, Tim, Cormier, Roland, Diedrich, Amy, and Tintoré, Joaquin (2014) A proposed ecosystem-based management system for marine waters: linking the theory of environmental policy to the practice of environmental management. Ecology and Society, 19 (4). 51. pp. 1-14.

Ridd, Peter V., da Silva, Eduardo Teixeira, and Stieglitz, Thomas (2013) Have coral calcification rates slowed in the last twenty years? Marine Geology, 346. pp. 392-399.

Browne, N.K., Smithers, S.G., and Perry, C.T. (2013) Carbonate and terrigenous sediment budgets for two inshore turbid reefs on the central Great Barrier Reef. Marine Geology, 346. pp. 101-123.

Perry, C.T., Smithers, S.G., and Gulliver, P. (2013) Rapid vertical accretion on a 'young' shore-detached turbid zone reef: Offshore Paluma Shoals, central Great Barrier Reef, Australia. Coral Reefs, 32 (4). pp. 1143-1148.

Davis, A.M., Thorburn, P.J., Lewis, S.E., Bainbridge, Z.T., Attard, S.J., Milla, R., and Brodie, J.E. (2013) Environmental impacts of irrigated sugarcane production: Herbicide run-off dynamics from farms and associated drainage systems. Agriculture, Ecosystems and Environment, 180. pp. 123-135.

Silva, Catarina N.S., Broadhurst, Matt K., Medeiroa, Rodrigo P., and Dias, José H. (2013) Resolving environmental issues in the southern Brazilian artisanal penaeid-trawl fishery through adaptive co-management. Marine Policy, 42. pp. 133-141.

Wood, Apanie L., Butler, James R.A., Sheaves, Marcus, and Wani, Jacob (2013) Sport fisheries: opportunities and challenges for diversifying coastal livelihoods in the Pacific. Marine Policy, 42. pp. 305-314.

Devlin, Michelle J., da Silva, Eduardo Teixeira, Petus, Caroline, Wenger, Amelia, Zeh, Daniel, Tracey, Dieter, Álvarez-Romero, Jorge G., and Brodie, Jon (2013) Combining in-situ water quality and remotely sensed data across spatial and temporal scales to measure variability in wet season chlorophyll-a: Great Barrier Reef lagoon (Queensland, Australia). Ecological Processes, 2. 31. pp. 1-22.

Momigliano, Paolo, Sparrow, Leanne, Blair, David, and Heimann, Kirsten (2013) The diversity of Coolia spp. (Dinophyceae Ostreopsidaceae) in the central Great Barrier Reef region. PLoS ONE, 8 (10). e799278. pp. 1-11.

Knight, Jon M., Griffin, Lachlan, Dale, Pat E.R., and Sheaves, Marcus (2013) Short-term dissolved oxygen patterns in sub-tropical mangroves. Estuarine, Coastal and Shelf Science, 131. pp. 290-296.

Flores, Florita, Collier, Catherine J., Mercurio, Philip, and Negri, Andrew P. (2013) Phytotoxicity of four photosystem II herbicides to tropical seagrasses. PLoS ONE, 8 (9). e75798. pp. 1-12.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2013) Pesticide contamination and phytotoxicity of sediment interstitial water to tropical benthic microalgae. Water Research, 47 (14). pp. 5211-5221.

Brandl, S.J., and Bellwood, D.R. (2013) Morphology, sociality, and ecology: can morphology predict pairing behavior in coral reef fishes? Coral Reefs, 32 (3). pp. 835-846.

Kelaher, Brendan P., Van Den Broek, James, York, Paul H., Bishop, Melanie J., and Booth, David J. (2013) Positive responses of a seagrass ecosystem to experimental nutrient enrichment. Marine Ecology Progress Series, 487. pp. 15-25.

Diedrich, Amy, Terrados, Jorge, Arroyo, Nina Larissa, and Balaguer, Pablo (2013) Modeling the influence of attitudes and beliefs on recreational boaters' use of buoys in the Balearic Islands. Ocean & Coastal Management, 78. pp. 112-120.

Stieglitz, Thomas (2013) Habitat engineering by decadal-scale bioturbation around shipwrecks on the Great Barrier Reef mid-shelf. Marine Ecology Progress Series, 477. . pp. 29-40.

Bell, Ian (2013) Algivory in hawksbill turtles: Eretmochelys imbricata food selection within a foraging area on the Northern Great Barrier Reef. Marine Ecology, 34 (1). pp. 43-55.

Jiang, Jie-Lan, Wang, Gui-Zhong, Mao, Ming-Guang, Wang, Ke-Jian, Li, Shao-Jing, and Zeng, Chao-Shu (2013) Differential gene expression profile of the calanoid copepod, Pseudodiaptomus annandalei, in response to nickel exposure. Comparative Biochemistry and Physiology - Part C, 157 (2). pp. 203-211.

DeBose, J.L., Nuttall, M.F., Hickerson, E.L., and Schmahl, G.P. (2013) A high-latitude coral community with an uncertain future: Stetson Bank, northwestern Gulf of Mexico. Coral Reefs, 32 (1). pp. 225-267.

Andutta, Fernando P. , Ridd, Peter V., and Wolanski, E. (2013) The age and the flushing time of the Great Barrier Reef Waters. Continental Shelf Research, 53. pp. 11-19.

Huerlimann, Roger, and Heimann, Kirsten (2013) Comprehensive guide to acetyl-carboxylases in algae. Critical reviews in Biotechnology, 33 (1). pp. 49-65.

Cinner, Joshua (2013) Conservation focus: human dimensions of coral reefs. Conservation Biology, 27 (3). pp. 441-442.

Macneil, M. Aaron, and Cinner, Joshua E. (2013) Hierarchical livelihood outcomes among co-managed fisheries. Global Environmental Change, 23 (6). pp. 1393-1401.

Smith, Timothy M., York, Paul, Stanley, Annalise M., Macreadie, Peter, Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2013) Microsatellite primer development for the seagrass Zostera nigricaulis (Zosteraceae). Conservation Genetics Resources, 5 (3). pp. 607-610.

Zeng, Chaoshu, and Romano, Nicholas (2013) Nitrogenous wastes: often overlooked pollutants in aquatic environments. Journal of Marine Science Research and Development, 3 (3). 1000e118. p. 1.

Sheaves, Marcus, Johnston, Ross, Johnson, Ashlee, Baker, Ronald, and Connolly, Rod M. (2013) Nursery function drives temporal patterns in fish assemblage structure in four tropical estuaries. Estuaries and Coasts, 36 (5). pp. 893-905.

Boyden, James, Joyce, Karen E., Boggs, Guy, and Wurm, Penny (2013) Object-based mapping of native vegetation and para grass (Urochloa mutica) on a monsoonal wetland of Kakadu NP using a Landsat 5 TM Dry-season time series. Journal of Spatial Science, 58 (1). pp. 53-77.

Limpus, Col, and Kamrowski, Ruth L. (2013) Ocean-finding in marine turtles: the importance of low horizon elevation as an orientation cue. Behaviour, 150 (8). pp. 863-893.

Sheaves, M., and Molony, B. (2013) Reproductive periodicity of the sparid, Acanthopagrus pacificus, on a hierarchy of temporal scales. Journal of Fish Biology, 82 (2). pp. 538-554.

MacIntyre, Martha, and Foale, Simon (2013) Science, traditional ecological knowledge, and anthropology: managing the impacts of mining in Papua New Guinea. Collaborative Anthropologies, 6. pp. 399-418.

Perry, C.T., Kench, P.S., Smithers, S.G., Yamano, H., O'Leary, M., and Gulliver, Pauline (2013) Time scales and modes of reef lagoon infilling in the Maldives and controls on the onset of reef island formation. Geology, 41 (10). pp. 1111-1114.

Romano, Nicholas, and Zeng, Chaoshu (2013) Toxic effects of ammonia, nitrite, and nitrate to decapod crustaceans: a review on factors influencing their toxicity, physiological consequences, and coping mechanisms. Reviews in Fisheries Science, 21 (1). pp. 1-21.

Stieglitz, Thomas C., Clarke, Jordan F., and Hancock, Gary J. (2013) The mangrove pump: the tidal flushing of animal burrows in a tropical mangrove forest determined from radionuclide budgets. Geochimica et Cosmochimica Acta, 102. pp. 12-22.

Dunn, Ryan J.K., Welsh, David T., Jordan, Mark A., Waltham, Nathan J., Lemckert, Charles J., and Teasdale, Peter R. (2012) Benthic metabolism and nitrogen dynamics in a sub-tropical coastal lagoon: microphytobenthos stimulate nitrification and nitrate reduction through photosynthetic oxygen evolution. Estuarine, Coastal and Shelf Science , 113. pp. 272-282.

Thomas, Alexander L., Fujita, Kazuhiko, Iryu, Yasufumi, Bard, Edouard, Cabioch, Guy, Camoin, Gilbert, Cole, Julia E., Deschamps, Pierre, Durand, Nicolas, Hamelin, Bruno, Heindel, Katrin, Henderson, Gideon M., Mason, Andrew J., Matsuda, Hiroki, Menabreaz, Lucie, Omori, Akitoshi, Quinn, Terry, Sakai, Saburo, Sato, Tokiyuki, Sugihara, Kaoru, Takahashi, Yasunari, Thouveny, Nicolas, Tudhope, Alexander W., Webster, Jody, Westphal, Hildegard, and Yokoyama, Yusuke (2012) Assessing subsidence rates and paleo water-depths for Tahiti reefs using U-Th chronology of altered corals. Marine Geology, 295-298. pp. 86-94.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2012) Chronic herbicide exposures affect the sensitivity and community structure of tropical benthic microalgae. Marine Pollution Bulletin, 65 (4-9). pp. 363-372.

de Miranda, Luiz Bruner, Olle, Eugenio Dalle, Bergamo, Alessandro Luvizon, dos Santos Silva, Lourval, and Pinheiro Andutta, Fernando (2012) Circulation and salt intrusion in the Piacaguera Channel, Santos (SP). Brazilian Journal of Oceanography, 60 (1). pp. 11-23.

Murray, Nicholas J., Phinn, Stuart R., Clemens, Robert S., Roelfsema, Chris M., and Fuller, Richard A. (2012) Continental scale mapping of tidal flats across east Asia using the landsat archive. Remote Sensing, 4 (11). pp. 3417-3426.

Browne, N.K., Smithers, S.G., and Perry, C.T. (2012) Coral reefs of the turbid inner-shelf of the Great Barrier Reef, Australia: an environmental and geomorphic perspective on their occurrence, composition and growth. Earth-Science Reviews, 115 (1-2). pp. 1-20.

Davis, Aaron M., Lewis, Stephen E., Bainbridge, Zoë T., Glendenning, Lionel, Turner, Ryan D.R., and Brodie, Jon E. (2012) Dynamics of herbicide transport and partitioning under event flow conditions in the lower Burdekin region, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 182-193.

Perry, C.T., Smithers, S.G., Gulliver, P., and Browne, N.K. (2012) Evidence of very rapid reef accretion and reef growth under high turbidity and terrigenous sedimentation. Geology, 40 (8). pp. 719-722.

Davis, Benjamin, Johnston, Ross, Baker, Ronnie, and Sheaves, Marcus (2012) Fish utilisation of wetland nurseries with complex hydrological connectivity. PLoS ONE, 7 (11). e49107. pp. 1-11.

Chipchase, T., and Awal, S. (2012) Investigation into the suitability of inland ground saline water for the growth of marine microalgae for industrial purposes. International Journal on Algae, 14 (1). pp. 79-92.

Collier, C.J., Waycott, M., and McKenzie, L.J. (2012) Light thresholds derived from seagrass loss in the coastal zone of the northern Great Barrier Reef, Australia. Ecological Indicators, 23. pp. 211-219.

Woodroffe, Colin D., McGregor, Helen V., Lambeck, Kurt, Smithers, Scott G., and Fink, David (2012) Mid-Pacific microatolls record sea-level stability over the past 5000 yr. Geology, 40 (10). pp. 951-954.

Diedrich, Amy, and Tintore, Joaquin (2012) Multi-method approach to exploring social-ecological dimensions in a Mediterranean suburban beach setting. Coastal Management, 40 (3). pp. 301-311.

Webster, A.J., Bartley, R., Armour, J.D., Brodie, J.E., and Thorburn, P.J. (2012) Reducing dissolved inorganic nitrogen in surface runoff water from sugarcane production systems. Marine Pollution Bulletin, 65 (4-9). pp. 128-135.

Collier, Catherine J., Waycott, Michelle, and Ospina, Ana Giraldo (2012) Responses of four Indo-West Pacific seagrass species to shading. Marine Pollution Bulletin, 65 (4-9). pp. 342-354.

Unsworth, Richard K.F., Rasheed, Michael A., Chartrand, Kathryn M., and Roelofs, Anthony J. (2012) Solar radiation and tidal exposure as environmental drivers of Enhalus acoroides dominated seagrass meadows. PLoS One, 7 (3). e34133. pp. 1-8.

Kennedy, Karen, Devlin, Michelle, Bentley, Christie, Lee-Chue, Kristie, Paxman, Chris, Carter, Steve, Lewis, Stephen, Brodie, Jon, Guy, Ellia, Vardy, Suzanne, Martin, Katherine C., Jones, Alison, Packett, Robert, and Mueller, Jochen F. (2012) The influence of a season of extreme wet weather events on exposure of the World Heritage Area Great Barrier Reef to pesticides. Marine Pollution Bulletin, 64 (7). pp. 1495-1507.

Brodie, J.E., Devlin, M., Haynes, D., and Waterhouse, J. (2011) Assessment of the eutrophication status of the Great Barrier Reef lagoon (Australia). Biogeochemistry, 106 (2). pp. 281-302.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2011) Connectivity dominates larval replenishment in a coastal reef fish metapopulation. Proceedings of the Royal Society of London Series B, Biological Sciences, 278 (1720). pp. 2954-2961.

Heupel, Michelle R., and Simpfendorfer, Colin A. (2011) Estuarine nursery areas provide a low-mortality environment for young bull sharks Carcharhinus leucas. Marine Ecology Progress Series, 433. pp. 237-244.

Diedrich, Amy, Huguet, Pablo Balaguer, and Subirana, Joaquín Tintoré (2011) Methodology for applying the limits of acceptable change process to the management of recreational boating in the Balearic Islands, Spain (Western Mediterranean). Ocean & Coastal Management, 54 (4). pp. 341-351.

Devlin, Michelle, Bricker, Suzanne, and Painting, Suzanne (2011) Comparison of five methods for assessing impacts of nutrient enrichment using estuarine case studies. Biogeochemistry, 106 (2). pp. 177-205.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Balaguer, P., Diedrich, A., Sarda, R., Fuster, M., Cañellas, B., and Tintoré, J. (2011) Spatial analysis of recreational boating as a first key step for marine spatial planning in Mallorca (Balearic Islands, Spain). Ocean & Coastal Management, 54 (3). pp. 241-249.

Rasheed, Michael A., and Unsworth, Richard K.F. (2011) Long-term climate-associated dynamics of a tropical seagrass meadow: implications for the future. Marine Ecology Progress Series, 422. pp. 93-103.

Golbuu, Yimnang, Wolanski, Eric, Harrison, Peter, Richmond, Robert H., Victor, Steven, and Fabricius, Katharina E. (2011) Effects of land-use change on characteristics and dynamics of watershed discharges in Babeldaob, Palau, Micronesia. Journal of Marine Biology, 2011. 981273. pp. 1-17.

Taylor, Helen, and Rasheed, Michael (2011) Impacts of a fuel oil spill on seagrass meadows in a subtropical port, Gladstone, Australia: the value of long-term marine habitat monitoring in high risk areas. Marine Pollution Bulletin, 63 (5-12). pp. 431-437.

Warren-Rhodes, Kimberley, Schwarz, Anne-Maree, Boyle, Linda Ng, Albert, Joelle, Agalo, Stephen Suti, Warren, Regon, Bana, Andrew, Paul, Chris, Kodosiku, Ringo, Bosma, Wilko, Yee, Douglas, Rönnbäck, Patrik, Crona, Beatrice, and Duke, Norm (2011) Mangrove ecosystem services and the potential for carbon revenue programmes in Solomon Islands. Environmental Conservation, 38 (4). pp. 485-496.

Mackenzie, Jock, Duke, Norman, Baba, Karin, Wood, Apanie, Rogers, Britt, Haller, Alex, and O'Mara, Julian (2011) MangroveWatch Burnett Mary region is one year old: outcomes and lessons learned. Wetlands Australia, National Wetlands Update, 19. pp. 26-27.

Zhou, Renchao, Ling, Shaoping, Zhao, Wenming, Osada, Naoki, Chen, Sufang, Zhang, Meng, He, Ziwen, Bao, Hua, Zhong, Cairong, Zhang, Bing, Lu, Xuemei, Turissini, David, Duke, Norman C., Lu, Jian, Shi, Suhua, and Wu, Chung-I (2011) Population genetics in nonmodel organisms: II. natural selection in marginal habitats revealed by deep sequencing on dual platforms. Molecular Biology and Evolution, 28 (10). pp. 2833-2842.

Silva, Catarina NS, Broadhurst, Matt K., Schwingel, Andréia, Dias, José H., Cattani, André P., and Spach, Henry L. (2011) Refining a Nordmøre-grid for a Brazilian artisanal penaeid-trawl fishery. Fisheries Research, 109 (1). pp. 168-178.

Figueiredo, Joana, and Pereira, Henrique M. (2011) Regime shifts in a socio-ecological model of farmland abandonment. Landscape Ecology, 26 (5). pp. 737-749.

Burford, M.A., Revill, A.T., Palmer, D.W., Clementson, L., Robson, B.J., and Webster, I.T. (2011) River regulation alters drivers of primary productivity along a tropical river-estuary system. Marine and Freshwater Research, 62 (2). pp. 141-151.

Giri, C., Ochieng, E., Tieszen, L.L., Zhu, Z., Singh, A., Loveland, T., Masek, J., and Duke, N. (2011) Status and distribution of mangrove forests of the world using earth observation satellite data. Global Ecology and Biogeography , 20 (1). pp. 154-159.

Scott, Colin, Lewis, Steve E., Milla, Rob, Taylor, Matthew C., Rodgers, Andrew J.W., Dumsday, Geoff, Brodie, Jon E., Oakeshott, John G., and Russell, Robyn J. (2010) A free-enzyme catalyst for the bioremediation of environmental atrazine contamination. Journal of Environmental Management, 91 (10). pp. 2075-2078.

Bannister, R.J., Battershill, C.N., and de Nys, R. (2010) Demographic variability and long-term change in a coral reef sponge along a cross-shelf gradient of the Great Barrier Reef. Marine and Freshwater Research, 61 (4). pp. 389-396.

Polidoro, Beth A., Carpenter, Kent E., Collins, Lorna, Duke, Norman C., Ellison, Aaron M., Ellison, Joanna C., Farnsworth, Elizabeth J., Fernando, Edwino S., Kathiresan, Kandasamy, Koedam, Nico E., Livingstone, Suzanne, Miyagi, Toyohiko, Moore, Gregg E., Nam, Vien Ngoc, Ong, Jin Eong, Primavera, Jurgenne H., Salmo, Severino G., Sanciangco, Jonnell C., Sukardjo, Sukristijono, Wang, Yamin, and Hong Yong, Jean Wan (2010) The loss of species: mangrove extinction risk and geographic areas of global concern. PLoS ONE, 5 (4). e10095. pp. 1-10.

Yule, Catherine M., Boyero, Luz, and Marchant, Richard (2010) Effects of sediment pollution on food webs in a tropical river (Borneo, Indonesia). Marine and Freshwater Research, 61 (2). pp. 204-213.

Chen, Zhongyuan, Yanagi, Tetsuo, and Wolanski, Eric (2010) EMECS8 – harmonizing catchment and estuary. Estuarine, Coastal and Shelf Science, 86 (3). v-v.

Diedrich, A., Tintore, J., and Navines, F. (2010) Balancing science and society through establishing indicators for integrated coastal zone management in the Balearic Islands. Marine Policy, 34 (4). pp. 772-781.

Diedrich, Amy (2010) Cruise ship tourism in Belize: the implications of developing cruise ship tourism in an ecotourism destination. Ocean & Coastal Management, 53 (5-6). pp. 234-244.

Brodie, Jon, Schroeder, Thomas, Rohde, Ken, Faithful, John, Masters, Bronwyn, Dekker, Arnold, Brando, Vittorio, and Maughan, Mirjam (2010) Dispersal of suspended sediments and nutrients in the Great Barrier Reef lagoon during river-discharge events: conclusions from satellite remote sensing and concurrent flood-plume sampling. Marine and Freshwater Research, 61 (6). pp. 651-664.

Salmo, Severino G., and Duke, Norman C. (2010) Establishing mollusk colonization and assemblage patterns in planted mangrove stands of different ages in Lingayen Gulf, Philippines. Wetlands Ecology and Management, 18 (6). pp. 745-754.

Duke, Norm, and Mackenzie, Jock (2010) Pioneering mangrove monitoring program partners experts with the community. Wetlands Australia, National Wetlands Update, 18. pp. 24-25.

Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.

Moore, Kenneth A., Shields, Erin C., and Jarvis, Jessie C. (2010) The role of habitat and herbivory on the restoration of tidal freshwater submerged aquatic vegetation populations. Restoration Ecology, 18 (4). pp. 596-604.

Lewis, Stephen, Milla, Rob, Brodie, Jon, Bainbridge, Zoë, and Davis, Aaron (2009) Pesticide residues in the Great Barrier Reef. Pesticides News, 86. pp. 8-11.

McMahon, K.M., and Waycott, M. (2009) New record for Halophila decipiens Ostenfeld in Kenya based on morphological and molecular evidence. Aquatic Botany, 91 (4). pp. 318-320.

Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Russell, Tanya L., Kay, Brian H., and Skilleter, Greg A. (2009) Environmental effects of mosquito insecticides on saltmarsh invertebrate fauna. Aquatic Biology, 6. pp. 77-90.

Cooper, Timothy F., and Ulstrup, Karin E. (2009) Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient. Estuarine, Coastal and Shelf Science , 83 (2). pp. 186-196.

Boyle, M.C., FitzSimmons, N.N., Limpus, C.J., Kelez, S., Velez-Zuazo, X., and Waycott, M. (2009) Evidence for transoceanic migrations by loggerhead sea turtles in the southern Pacific Ocean. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1664). pp. 1993-1999.

Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.

Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.

Sheaves, Marcus (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Marine Ecology Progress Series, 391. pp. 107-115.

Russell, Tanya L., and Hale, Peter T. (2009) Conservation of the false water rat (Xeromys myoides) depends on landscape complementation. Australian Mammalogy, 31 (2). pp. 81-87.

Maughan, M., and Brodie, J. (2009) Reef exposure to river-borne contaminants: a spatial model. Marine and Freshwater Research, 60 (11). pp. 1132-1140.

Mitchell, A., Reghenzani, J., Faithful, J., Furnas, M., and Brodie, J. (2009) Relationships between land use and nutrient concentrations in streams draining a ‘wet-tropics’ catchment in northern Australia. Marine and Freshwater Research, 60 (11). pp. 1097-1108.

Brodie, Jon, Lewis, Stephen, Bainbridge, Zoe, Mitchell, Alan, Waterhouse, Jane, and Kroon, Frederieke (2009) Target setting for pollutant discharge management of rivers in the Great Barrier Reef catchment area. Marine and Freshwater Research, 60 (11). pp. 1141-1149.

Abrantes, Katya, and Sheaves, Marcus (2008) Incorporation of terrestrial wetland material into aquatic food webs in a tropical estuarine wetland. Estuarine, Coastal and Shelf Science , 80 (3). pp. 401-412.

van Tussenbroek, Brigitta I., Barba Santos, M. Guadalupe, Van Dijk, Jent Kornelis, Sanabria Alcaraz, S.N. Marisela, and Téllez Calderón, M. Lourdes (2008) Selective elimination of rooted plants from a tropical seagrass bed in a back-reef lagoon: a hypothesis tested by hurricane Wilma (2005). Journal of Coastal Research, 24 (1). pp. 278-281.

Prado, Patricia, Collier, Catherine J., and Lavery, Paul S. (2008) 13C and 15N translocation within and among shoots in two Posidonia species from Western Australia. Marine Ecology Progress Series, 361. pp. 69-82.

Berger, Uta, Rivera-Monroy, Victor H., Doyle, Thomas W., Dahdouh-Guebas, Farid, Duke, Norman C., Fontalvo-Herazo, Martha L., Hildenbrandt, Hanno, Koedam, Nico, Mehlig, Ulf, Piou, Cyril, and Twilley, Robert R. (2008) Advances and limitations of individual-based models to analyze and predict dynamics of mangrove forests: a review. Aquatic Botany, 89 (2). pp. 260-274.

Meynecke, J-O., Lee, S.Y., and Duke, N.C. (2008) Linking spatial metrics and fish catch reveals the importance of coastal wetland connectivity to inshore fisheries in Queensland, Australia. Biological Conservation, 141 (4). pp. 981-996.

Bouillon, Steven, Borges, Alberto V., Castañeda-Moya, Edward, Diele, Karen, Dittmar, Thorsten, Duke, Norman C., Kristensen, Erik, Lee, Shing Y., Marchand, Cyril, Middelburg, Jack J., Rivera-Monroy, Victor H., Smith, Thomas, and Twilley, Robert R. (2008) Mangrove production and carbon sinks: a revision of global budget estimates. Global Biogeochemical Cycles, 22 (2). GB2013.

Pike, David A. (2008) Natural beaches confer fitness benefits to nesting marine turtles. Biology Letters, 4 (6). pp. 704-706.

Rasheed, Michael A., Dew, Kara R., McKenzie, Len J., Coles, Robert G., Kerville, Simon P., and Campbell, Stuart J. (2008) Productivity, carbon assimilation and intra-annual change in tropical reef platform seagrass communities of the Torres Strait, north-eastern Australia. Continental Shelf Research, 28 (16). pp. 2292-2303.

Sheppard, James K., Carter, Alex B., McKenzie, Len J., Pitcher, C. Roland, and Coles, Robert G. (2008) Spatial patterns of sub-tidal seagrasses and their tissue nutrients in the Torres Strait, northern Australia: implications for management. Continental Shelf Research, 28 (16). pp. 2282-2291.

Doupe, Robert G., and Burrows, Damien W. (2008) Thirty years later, should we be more concerned for the ongoing invasion of Mozambique Tilapia in Australia? Pacific Conservation Biology, 14 (4). pp. 235-238.

Gilman, Eric L., Ellison, Joanna, Duke, Norman C., and Field, Colin (2008) Threats to mangroves from climate change and adaptation options: a review. Aquatic Botany, 89 (2). pp. 237-250.

Balaguer, Pau, Sarda, Rafael, Ruiz, Maurici, Diedrich, Amy, Vizoso, Guillermo, and Tintore, Joaquin (2008) A proposal for boundary delimitation for integrated coastal zone management initiatives. Ocean & Coastal Management, 51 (12). pp. 806-814.

Duke, N.C., Meynecke, J.-O., Dittmann, S., Ellison, A.M., Anger, K., Berger, U., Cannicci, S., Diele, K., Ewel, K.C., Field, C.D., Koedam, N., Lee, S.Y., Marchand, C., Nordhaus, I., and Dahdouh-Guebas, F. (2007) A world without mangroves? Science, 317. pp. 41-42.

Meynecke, Jan-Olaf, Lee, Shing Yip, Duke, Norman C., and Warnken, Jan (2007) Relationships between estuarine habitats and coastal fisheries in Queensland, Australia. Bulletin of Marine Science, 80 (3). pp. 773-793.

van Tussenbroek, Brigitta I., and van Dijk, Jent Kornelis (2007) Spatial and temporal variability in biomass and production of psammophytic Halimeda incrassata (Bryopsidales, Chlorophyta) in a Caribbean reef lagoon. Journal of Phycology, 43 (1). pp. 69-77.

Naithani, Jaya, Darchambeau, François, Deleersnijder, Eric, Descy, Jean-Pierre, and Wolanski, Eric (2007) Study of the nutrient and plankton dynamics in Lake Tanganyika using a reduced-gravity model. Ecological Modelling, 200 (1-2). pp. 225-233.

Jupiter, Stacy D., Potts, Donald C., Phinn, Stuart R., and Duke, Norman C. (2007) Natural and anthropogenic changes to mangrove distributions in the Pioneer River Estuary (Queensland, Australia). Wetlands Ecology and Management, 15 (1). pp. 51-62.

Mtahiko, M.G.G., Gereta, E., Kajuni, A. R., Chiombola, E. A .T., Ng’umbi, G. Z., Coppolillo, P., and Wolanski, E. (2006) Towards an ecohydrology-based restoration of the Usangu wetlands and the Great Ruaha River, Tanzania. Wetlands Ecology and Management, 14 (6). pp. 489-503.

Mnaya, Bakari, Mwangomo, Ephraim, and Wolanski, Eric (2006) The influence of wetlands, decaying organic matter, and stirring by wildlife on the dissolved oxygen concentration in eutrophicated water holes in the Seronera River, Serengeti National Park, Tanzania. Wetlands Ecology and Management, 14 (5). pp. 421-425.

Mnaya, Bakari, Wolanski, Eric, and Kiwango, Yustina (2006) Papyrus wetlands a lunar-modulated refuge for aquatic fauna. Wetlands Ecology and Management, 14 (4). pp. 359-363.

van Tussenbroek, Brigitta I., Barba Santos, M. Guadalupe, and van Dijk, Jent Kornelis (2006) Unusual synchronous spawning by green algae (Bryopsidales), after the passage of Hurricane Wilma (2005). Botanica Marina, 49 (3). pp. 270-271.

Doupe, Robert G., Lymbery, Alan J., and Pettit, Neil E. (2006) Stream salinization is associated with reduced taxonomic, but not functional diversity in a riparian plant community. Austral Ecology, 31 (3). pp. 388-393.

Doupe, Rob, Froend, Ray, and Pettit, Neil (2006) A comment on allocating regulated river water for the Ord River, Western Australia. Ecological Management and Restoration, 7 (1). pp. 32-36.

Painting, S J , Devlin, M.J., Malcolm, S. J., Parker, E.R., Mills , D.K., Mills, C., Tett, P., Wither, A., Burt, J., Jones, R., and Winpenny, K. (2006) Assessing the impact of nutrient enrichment in estuaries: susceptibility to eutrophication. Marine Pollution Bulletin, 55. pp. 74-91.

Bishop, Melanie J., Kelaher, Brendan P., Smith, Marcus P. Lincoln, York, Paul H., and Booth, David J. (2006) Ratio-dependent response of a temperate Australian estuarine system to sustained nitrogen loading. Oecologia, 149 (4). pp. 701-708.

Hazel, Julia, and Gyuris, Emma (2006) Vessel-related mortality of sea turtles in Queensland, Australia. Wildlife Research, 33 (2). pp. 149-154.

Gill, H. S., Morgan, D.L., Doupe, R.G., and Rowland, A.J. (2006) The fishes of Lake Kununurra, a highly regulated section of the Ord River in northern Western Australia. Records of the Western Australian Museum, Supplement, 23 (1). pp. 1-6.

Bell, Alicia M., and Duke, Norman C. (2005) Effects of Photosystem II-inhibiting herbicides on mangroves: preliminary toxicology trials. Marine Pollution Bulletin, 51 (1-4). pp. 297-307.

McMahon, Kathryn, Bengston-Nash, Susan, Eaglesham, Geoff, Müller, Jochen F., Duke, Norman C., and Winderlich, Steve (2005) Herbicide contamination and the potential impact to seagrass meadows in Hervey Bay, Queensland, Australia. Marine Pollution Bulletin, 51 (1-4). pp. 325-334.

Duke, Norman C., Bell, Alicia M., Pedersen, Dan K., Roelfsema, Chris M., and Bengston Nash, Susan (2005) Herbicides implicated as the cause of severe mangrove dieback in the Mackay region, NE Australia: consequences for marine plant habitats of the GBR World Heritage Area. Marine Pollution Bulletin, 51 (1-4). pp. 308-324.

Devlin, M.J., and Brodie, J. (2005) Terrestrial discharge into the Great Barrier Reef Lagoon: nutrient behavior in coastal waters. Marine Pollution Bulletin, 51 (1). pp. 9-22.

Smith, L. D., Devlin, M., Haynes, D., and Gilmour, J.P. (2005) A demographic approach to monitoring the health of coral reefs. Marine Pollution Bulletin, 51 (1). pp. 399-407.

Morgan, David L., Rowland, Andrew J., Gill, Howard S., and Doupe, Rob G. (2004) The implications of introducing a large piscivore (Lates calcarifer) into a regulated northern Australian river (Lake Kununurra, Western Australia). Lakes and Reservoirs: Research and Management, 9 (3). pp. 181-193.

Victor, S., Golbuu, Y., Wolanski, E., and Richmond, R.H. (2004) Fine sediment trapping in two mangrove-fringed estuaries exposed to contrasting land-use intensity, Palau, Micronesia. Wetlands Ecology and Management, 12 (4). pp. 277-283.

Gereta, Emmanuel, Mwangomo, Ephraim, and Wolanski, Eric (2004) The influence of wetlands in regulating water quality in the Seronera River, Serengeti National Park, Tanzania. Wetlands Ecology and Management, 12 (4). pp. 301-307.

Gereta, Emmanuel, Meing'ataki, Godwell Elias Ole, Mduma, Simon, and Wolanski, Eric (2004) The role of wetlands in wildlife migration in the Tarangire ecosystem, Tanzania. Wetlands Ecology and Management, 12 (4). pp. 285-299.

Ban, Natalie, and Coomes, Oliver T. (2004) Home gardens in Amazonian Peru: diversity and exchange of planting material. Geographical Review, 94 (3). pp. 348-367.

Duke, Norman, and Watkinson, Andrew J. (2002) Chlorophyll-deficient propagules of Avicennia marina and apparent longer term deterioration of mangrove fitness in oil-polluted sediments. Marine Pollution Bulletin, 44 (11). pp. 1269-1276.

Duke, Norman C. (2002) Sustained high levels of foliar herbivory of the mangrove Rhizophora stylosa by a moth larva Doratifera stenosa (Limacodidae) in north-eastern Australia. Wetlands Ecology and Management, 10 (5). pp. 403-419.

Duke, Norman C., Lo, Eugenia Yuk Ying, and Sun, Mei (2002) Global distribution and genetic discontinuities of mangroves: emerging patterns in the evolution of Rhizophora. Trees, 16 (2). pp. 65-79.

Wolanski, Eric (2002) Damming the Mekong and Ord River estuaries. 7th International Coastal Symposium. p. 1. (Unpublished)

Duke, Norman C. (2001) Gap creation and regenerative processes driving diversity and structure of mangrove ecosystems. Wetlands Ecology and Management, 9 (3). pp. 257-269.

Allen, James A., Krauss, Ken W., Duke, Norman C., Herbst, Derral R., Björkman, Olle, and Shih, Connie (2000) Bruguiera species in Hawai'i: systematic considerations and ecological implications. Pacific Science, 54 (4). pp. 331-343.

Duke, Norman C., Burns, Kathryn A., Swannell, Richard P.J., Dalhaus, Otto, and Rupp, Roland J. (2000) Dispersant use and a bioremediation strategy as alternate means of reducing the impact of large oil spills on mangrove biota in Australia: the Gladstone field trials. Marine Pollution Bulletin, 41 (7-12). pp. 403-412.

Burns, K.A., Codi, S., and Duke, N.C. (2000) Gladstone, Australia field studies: weathering and degradation of hydrocarbons in oiled mangrove and salt marsh sediments with and without the application of an experimental bioremediation protocol. Marine Pollution Bulletin, 41 (7-12). pp. 392-402.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., Ryan, D.A.J., and Ahokas, J.T. (2000) Induction of hepatic cytochrome P-450 1A in Pikey Bream (Acanthopagrus berda) collected from agricultural and urban catchments in far north Queensland. Marine Pollution Bulletin, 41 (7-12). pp. 377-384.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., and Coventry, R.J. (1999) Organochlorine pesticide residues in soils and sediments of the Herbert and Burdekin River regions: implications for contamination of the Great Barrier Reef. Marine Pollution Bulletin, 39 (1-12). pp. 367-375.

Burns, K.A., Cody, S., Swannell, R.J.P., and Duke, N.C. (1999) Assessing the oil degradation potential of endogenous micro-organisms in tropical marine wetland. Mangroves and Salt Marshes, 3 (2). pp. 67-83.

Rasheed, Michael A. (1999) Recovery of experimentally created gaps within a tropical Zostera capricorni (Aschers.) seagrass meadow, Queensland Australia. Journal of Experimental Marine Biology and Ecology, 235 (2). pp. 183-200.

Burns, Kathy, Codi, Susan, Pratt, Catherine, and Duke, Norman (1999) Weathering of hydrocarbons in mangrove sediments: testing the effects of using dispersants to treat oil spills. Organic Geochemistry, 30. pp. 1273-1286.

Duke, Norman C., Benzie, John A.H., Goodall, John A., and Ballment, Elizabeth R. (1998) Genetic structure and evolution of species in the mangrove genus Avicennia (Avicenniaceae) in the Indo-West Pacific. Evolution: international journal of organic evolution, 52 (6). pp. 1612-1626.

Duke, Norman, Ball, Marilyn, and Ellison, Joanna (1998) Factors influencing biodiversity and distributional gradients in mangroves. Global Ecology and Biogeography, 7 (1). pp. 27-47.

Duke, N.C., Burns, K.A., Ellison, J.C., Rupp, R.J., and Dalhaus, O. (1998) Effects of oil and dispersed-oil on mature mangroves in field trials at Gladstone. APPEA Journal, 38 (2). pp. 637-645.

Duke, N.C., Ellison, J.C., and Burns, K.A. (1998) Surveys of oil spill incidents affecting mangrove habitat in Australia: a preliminary assessment of incidents, impacts on mangroves, and recovery of deforested areas. APPEA Journal, 38 (2). pp. 646-654.

Duke, Norman C., Pinzón, Zulelka S., and Prada, Martha C. (1997) Large scale damage to mangrove forests following two large oil spills in Panama. Biotropica, 29 (1). pp. 2-14.

Duke, Norman C. (1995) Genetic diversity, distributional barriers and rafting continents - more thoughts on the evolution of mangroves. Hydrobiologia, 295 (1). pp. 167-181.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1994) Los manglares / The swamps. Scientia, 8 (2). pp. 80-98.

Duke, Norman C. (1994) A mangrove hybrid, Sonneratia x urama (Sonneratiaceae) from northern Australia and southern New Guinea. Australian Systematic Botany, 7 (5). pp. 521-526.

Duke, Norman C., and Pinzón M., Zuleika S. (1992) Aging Rhizophora seedlings from leaf scar nodes: a technique for studying recruitment and growth in mangrove forests. Biotropica, 24 (2 Part A). pp. 173-186.

Duke, Norman (1991) Nypa in the mangroves of Central America: introduced or relict? Principes, 35 (3). pp. 127-132.

Duke, N.C. (1991) A systematic revision of the mangrove genus Avicennia (Avicenniaceae) in Australasia. Australian Systematic Botany, 4 (2). pp. 299-324.

Robertson, A.I., and Duke, N.C. (1990) Mangrove fish communities in tropical Queensland, Australia: spatial and temporal patterns in densities, biomass and community structure. Marine Biology, 104 (3). pp. 369-379.

Duke, N.C. (1990) Morphological variation in the mangrove genus Avicennia in Australasia: systematic and ecological considerations. Australian Systematic Botany, 3 (2). pp. 221-239.

Duke, N.C. (1990) Phenological trends with latitude in the mangrove tree Avicennia marina. Journal of Ecology, 78 (1). pp. 113-133.

Robertson, Alistar I., and Duke, Norman C. (1990) Recruitment, growth and residence time of fishes in a tropical Australian mangrove system. Estuarine, Coastal and Shelf Science, 31 (5). pp. 723-743.

Heimann, Kirsten, Benting, J., Timmermann, Stefanie, and Melkonian, M. (1989) The flagellar developmental cycle in algae: two types of flagellar development in uniflagellate algae. Protoplasma, 153 (1-2). pp. 14-23.

Duke, N.C. (1988) Phenologies and litter fall of two mangrove trees, Sonneratia alba Sm. and S. caseolaris (L.) Engl., and their putative hybrid, S. X gulngai N.C. Duke. Australian Journal of Botany, 36 (4). pp. 473-482.

Robertson, A.I., and Duke, N.C. (1987) Insect herbivory on mangrove leaves in North Queensland. Australian Journal of Ecology, 12 (1). pp. 1-7.

Robertson, A.I., and Duke, N.C. (1987) Mangroves as nursery sites: comparisons of the abundance and species composition of fish and crustaceans in mangroves and other nearshore habitats in tropical Australia. Marine Biology, 96 (2). pp. 193-205.

Duke, N.C., and Jackes, Betsy R. (1987) A systematic revision of the mangrove genus Sonneratia (Sonneratiaceae) in Australasia. Blumea, 32 (2). pp. 277-302.

Poovachiranon, Sombat, Boto, Kevin, and Duke, Norman (1984) Food preference studies and ingestion rate measurements of the mangrove amphipod Parhyale hawaiensis (Dana). Journal of Experimental Marine Biology & Ecology, 98 (1-2). pp. 129-140.

Duke, N.C., Bunt, J.S., and Williams, W.T. (1984) Observations on the floral and vegetative phenologies of north-eastern Australian mangroves. Australian Journal of Botany, 32 (1). pp. 87-99.

Duke, N.C. (1984) A mangrove hybrid, Sonneratia X gulngai (Sonneratiaceae), from north-eastern Australia. Austrobaileya, 2 (1). pp. 103-105.

Bunt, J.S., Williams, W.T., and Duke, N.C. (1982) Mangrove distributions in north-east Australia. Journal of Biogeography, 9 (2). pp. 111-120.

Primack, Richard B., Duke, Norman C., and Tomlinson, P.B. (1981) Floral morphology in relation to pollination ecology in five Queensland coastal plants. Austrobaileya, 1 (4). pp. 346-355.

Duke, N.C., Birch, W.R., and Williams, W.T. (1981) Growth rings and rainfall correlations in a mangrove tree of the genus Diospyros (Ebenaceae). Australian Journal of Botany, 29 (2). pp. 135-142.

Williams, W.T., Bunt, J.S., and Duke, N.C. (1981) Mangrove litter fall in north eastern Australia. 2. Periodicity. Australian Journal of Botany, 29 (5). pp. 555-563.

Duke, N.C., and Bunt, J.S. (1979) The genus Rhizophora (Rhizophoraceae) in north-eastern Australia. Australian Journal of Botany, 27 (5). pp. 657-678.

Tomlinson, P.B., Bunt, J.S, Primack, R.B., and Duke, N.C. (1978) Lumnitzera rosea (Combretaceae) - its status and floral morphology. Journal of the Arnold Herbarium, 59. pp. 342-351.

Book Chapter

McLeod, Ian Michael, zu Ermgassen, Philine S.E., Gillies, Chris L., Hancock, Boze, and Humphries, Austin (2019) Can bivalve babitat restoration improve degraded estuaries? In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, UK, pp. 427-442.

Hopley, David, and Smithers, Scott (2019) Geomorphology of Coral Reefs with special reference to the Great Barrier Reef. In: Hutchings, Pat, Kingsford, Michael J., and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 9-24.

Hutchings, P. A., Kingsford, M. J., and Hoegh-Guldberg, Ove (2019) Introduction to the Great Barrier Reef. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 1-5.

Dunn, Ryan J.K., Waltham, Nathan J., Huang, Jianyin, Teasdale, Peter R., and King, Brian A. (2019) Protecting water quality in urban estuaries: Australian case studies. In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, United Kingdom, pp. 69-86.

Coles, R.G., Rasheed, M.A., Grech, A., and McKenzie, L.J. (2016) Seagrass meadows of northeastern Australia. In: Finlayson, C.M., Milton, G.R., Prentice, R.C., and Davidson, N.C., (eds.) The Wetland Book: distribution description and conservation. Springer, Dordrecht, The Netherlands, pp. 1-9.

Cinner, Joshua E., and Kittinger, John N. (2015) Linkages between social systems and coral reefs. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 215-220.

Brodie, Jon, Lewis, Stephen, Davis, Aaron, Bainbridge, Zoe, O'Brien, Dominique, Waterhouse, Jane, Devlin, Michelle, and Thomas, Colette R. (2015) Management of agriculture to preserve environmental values of the Great Barrier Reef, Australia. In: Chicharo, Luís, Müller, Felix, and Fohrer, Nicola, (eds.) Ecosystems Services and River Basin Ecohydrology. Springer, Dordrecht, Netherlands, pp. 275-292.

Schmitt, Klaus, and Duke, Norman C. (2015) Mangrove management, assessment and monitoring. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-29.

Duke, Norman C., and Schmitt, Klaus (2015) Mangroves: unusual forests at the seas edge. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-24.

Kittinger, John N., Cinner, Joshua E., Aswani, Shankar, and White, Alan T. (2014) Back to the future: integrating customary practices and institutions into comanagement of small-scale fisheries. In: Kittinger, John N., McClenachan, Loren, Gedan, Keryn B., and Blight, Louise K., (eds.) Marine Historical Ecology in Conservation: applying the past to manage for the future. University of California Press, Oakland, CA, USA, pp. 135-160.

Sheaves, Marcus, Abrantes, Kátya G., and Johnston, Ross (2014) Deluge Inlet, a pristine small tropical estuary in north-eastern Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 261-275.

Wolanski, Eric, and Ducrotoy, Jean-Paul (2014) Estuaries of Australia in 2050 and beyond: a synthesis. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 1-13.

Dunn, Ryan J.K., Waltham, Nathan J., Benfer, Nathan P., King, Brian A., Lemckert, Charles J., and Zigic, Sasha (2014) Gold Coast Broadwater: southern Moreton Bay, Southeast Queensland (Australia). In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 93-110.

Davis, Aaron M., Lewis, Stephen E., O'Brien, Dominique S., Bainbridge, Zoë T., Bentley, Christie, Mueller, Jochen F., and Brodie, Jon E. (2014) Water resource development and high value coastal wetlands on the lower Burdekin floodplain, Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 223-246.

Wang, X.H., and Andutta, F.P. (2013) Sediment transport dynamics in ports, estuaries and other coastal environments. In: Manning, Andrew J., (ed.) Sediment Transport Processes and their Modelling Applications. InTech, Croatia, pp. 3-36.

Heimann, Kirsten, Klerks, Paul L., and Hasenstein, Karl H. (2013) Dinoflagellate bioluminescence: a key concept for studying organelle movement. In: Heimann, Kirsten, and Katsaros, Christos, (eds.) Advances in Algal Cell Biology. Marine and Freshwater Botany . Walter de Gruyter, Berlin, Germany, pp. 177-190.

Bellwood, David R., Renema, Willem, and Rosen, Brian R. (2012) Biodiversity hotspots, evolution and coral reef biogeography: a review. In: Gower, David J., Johnson, Kenneth G., Richardson, James E., Rosen, Brian R., Rüber, Lukas, and Williams, Suzanne T., (eds.) Biotic Evolution and Environmental Change in Southeast Asia. The Systematics Association Special Volume Series, 82 . Cambridge University Press, New York, USA, pp. 216-245.

Wolanski, Eric, Andutta, Fernando, and Delhez, Eric (2012) Estuarine hydrology. In: Bengtsson, Lars, Herschy, Reginald W., and Fairbridge, Rhodes W., (eds.) Encyclopedia of Lakes and Reservoirs. Encyclopedia of Earth Sciences Series . Springer-Verlag, pp. 238-249.

Heimann, Kirsten (2012) Gymnodinium and related dinoflagellates. In: UNSPECIFIED, (ed.) Encyclopedia of Life Sciences (eLS). Wiley-Blackwell, pp. 1-17.

Stieglitz, Thomas C. (2012) The Yongala's "Halo of Holes" - systematic bioturbation close to a shipwreck. In: Harris, Peter T., and Baker, Elaine K., (eds.) Seafloor Geomorphology as Benthic Habitat: GeoHAB atlas of seafloor geomorphic features and benthic habitats. Elsevier, London, pp. 277-287.

Duke, Norman C. (2011) Mangrove islands. In: Hopley, David, (ed.) Encyclopedia of Modern Coral Reefs. Structure, Form and Process. Springer, Dordrecht, The Netherlands, pp. 653-655.

Duke, Norman C. (2011) Mangroves. In: Hopley, David C., (ed.) Encyclopedia of Modern Coral Reefs. Structure, Form and Process. Encyclopedia of Earth Sciences Series . Springer, Dordrecht, The Netherlands, pp. 655-663.

Duke, N.C., and Larkum, A.W.D. (2008) Mangroves and seagrasses. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Collingwood, VIC, pp. 156-170.

Wolanski, Eric (2007) Protective functions of coastal forests and trees against natural hazards. In: Braatz, S., Fortuna, S., Broadhead, J., and Leslie, R., (eds.) Coastal Protection in the Aftermath of the Indian Ocean Tsunami: what role for forests and trees? Food and Agriculture Organization of the United Nations, Regional Office for Asia and the Pacific, Bangkok, Thailand, pp. 157-179.

Duke, Norman C., and Allen, James A. (2006) Atlantic-East Pacific red mangroves: Rhizophora mangle, R. samoensis, R. racemosa, R. X harrisonii. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-18.

Duke, Norman C. (2006) Indo-West Pacific stilt mangroves: Rhizophora apiculata, R. mucronata, R. stylosa, R. X annamalai, R. X lamarckii. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 641-660.

Allen, James A., and Duke, Norman C. (2006) Large-leafed mangrove: Bruguiera gymnorrhiza. In: Elevitch, Craig R., (ed.) Traditional Trees of Pacific Islands: their culture, environment, and use. Permanent Agriculture Resources (PAR), Holualoa, Hawaii, pp. 1-15.

Lockie, Stewart, and Jennings, Susan (2003) The social impacts of natural resource use and condition: the invisible dimension of coastal resource management. In: Pritchard, Bill, Curtis, Allan, Spriggs, John, and Le Heron, Richard, (eds.) Social Dimensions of the Triple Bottom Line in Rural Australia. Department of Agriculture, Fisheries and Forestry, Canberra, ACT, Australia, pp. 131-143.

Duke, Norman (2001) Mangrove phenologies and the factors influencing them in the Australasian region. In: De Lacerda, Luiz-Drude, (ed.) Mangrove Ecosystems: Function and Management. Environmental Science . Springer-Verlag, Berlin, Germany, pp. 217-233.

Duke, Norman, and Wolanski, Eric (2001) Muddy coastal waters and depleted mangrove coastlines - depleted seagrass and coral reefs. In: Wolanski, Eric, (ed.) Oceanographic Processes of Coral Reefs: physical and biology links in the Great Barrier Reef. CRC Press, Washington, DC, USA, pp. 77-91.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1999) Recovery of tropical mangrove forests following a major oil spill: a study of recruitment and growth, and the benefits of planting. In: Yáñez-Arancibia, A., and Lara-Domínguez, A.L., (eds.) Ecosistemas de Manglar en América Tropical / Mangrove Ecosystems in Tropical America. Instituto de Ecologia, Xalapa, México, pp. 231-254.

Duke, Norman (1997) Mangroves in the Great Barrier Reef World Heritage Area: current status, long-term trends, management implications and research. In: Wachenfeld, David, Oliver, Jamie, and Davis, Kim, (eds.) State of the Great Barrier Reef World Heritage Area Workshop. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 288-299.

Duke, Norman (1996) Mangrove reforestation in Panama: an evaluation of planting in areas deforested by a large oil spill. In: Field, Colin D., (ed.) Restoration of mangrove ecosystems. International Society for Mangrove Ecosystems ISME & International Tropical Timber Organization ITTO, Okinawa, Japan, pp. 209-232.

Duke, Norman C. (1992) Mangrove floristics and biogeography. In: Robertson, A.I., and Alongi, D.M., (eds.) Tropical Mangrove Ecosystems. Coastal and Estuarine Studies Series (41). American Geophysical Union, Washington, D.C., pp. 63-100.

Report

Duke, Norman C., and Mackenzie, Jock (2018) ECY Report 2017. Final report: East Cape York shoreline environmental surveys. External Commissioned Report. James Cook University, Townsville, QLD, Australia.

Harris, Todd, Hope, Pandora, Oliver, Eric, Smalley, Robert, Arblaster, Julie, Holbrook, Neil, Duke, Norman, Pearce, Karen, Braganza, Karl, and Bindoff, Nathaniel (2017) Climate drivers of the 2015 Gulf of Carpentaria mangrove dieback. Report. Bureau of Meteorology, Canberra, ACT, Australia.

Wells, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring Update: May - August 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Shepherd, Lloyd, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring Update: February - May 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Connolly, Rod, Dunn, Ryan, Jackson, Emma, Kristensen, Erik, Maxwell, Paul, Pearson, Ryan, Rasheed, Michael, and York, Paul (2016) Gold Coast Seagrass Sensitivities and Resilience (SRMP-003). Report. Griffith University, Gold Coast, QLD, Australia.

Reason, Carissa, York, Paul, Scott, Emma, McKenna, Skye, and Rasheed, Michael (2016) Seagrass Habitat of Mourilyan Harbour: annual monitoring report: 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

York, Paul H., Reason, Carissa, Scott, Emma, Sankey, Tonia, and Rasheed, Michael A. (2016) Seagrass Habitat of Cairns Harbour and Trinity Inlet: annual monitoring report 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, Davies, Jaclyn, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: November 2015 - February 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: August - November 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Collier, Catherine J., Langlois, Lucas, Zemoi, Rahel, Martin, Katherine, and McKenzie, Len (2016) Developing and refining biological indicators for condition assessments in an integrated monitoring program. Report. James Cook University, Cairns, Australia.

Collier, Catherine J., Chartrand, Katie, Honchin, Carol, Fletcher, Adam, and Rasheed, Michael (2016) Light thresholds for seagrasses of the GBRWHA: a synthesis and guiding document. Report. James Cook University, Cairns, Australia.

Bryant, Catherine, Davies, Jaclyn, Sankey, Tonia, and Rasheed, Michael (2016) Long-Term Seagrass Monitoring in Port Curtis: quarterly permanent transect monitoring progress report 2009 to 2015. Report. James Cook University, Cairns, QLD, Australia.

Murphy, Helen T., Ford, Andrew, Graham, Erin, and Metcalfe, Dan (2016) Mapping to underpin management of tropical littoral rainforest. Report. National Environmental Science Programme, NESP Northern Australia Environmental Resources Hub.

Bryant, C.V., Carter, A.B., Jarvis, J.C., and Rasheed, M.A. (2016) Port Curtis seagrass seed bank density and viability studies: year 2 report. Report. James Cook University, Cairns, QLD, Australia.

Davies, J.D., Bryant, C.V., Carter, A.B., and Rasheed, M.A. (2016) Seagrasses in Port Curtis and Rodds Bay 2015: annual long-term monitoring. Report. James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: May - August 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Taylor, Helen, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring February/ March - May 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Davies, J.D., Bryant, C.V., Jarvis, J.C., McKenna, S.A., and Rasheed, M.A. (2015) Seagrasses in Port Curtis and Rodds Bay 2014: annual long-term monitoring, biannual western basin, and updated baseline survey. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Sozou, A.M., Scott, E.L., and Rasheed, M.A. (2015) Port of Abbot Point long-term seagrass monitoring: annual report 2013-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: November 2014 - March 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Sozou, A.M., McKenna, S.A., and Rasheed, M.A. (2015) Port of Karumba long-term seagrass monitoring: November 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2015) Port of Hay Point & Keswick Island seagrass & benthic habitat: baseline survey: 2014. Report. James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Tol, Samantha, and Rasheed, Michael (2015) Port of Townsville annual monitoring and baseline survey: October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., and Carter, A.B. (2015) Port of Weipa long-term seagrass monitoring: 2000-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Pernice, M., Schliep, M., Szabo, M., Rasheed, M., Bryant, C., York, P., Chartrand, K., Petrou, K., and Ralph, P. (2015) Development of a molecular biology tool kit to monitor dredging-related light stress in the seagrass Zostera muelleri ssp. capricorni in Port Curtis. Report. TropWATER, Cairns, QLD, Australia.

Carter, Alex, Jarvis, Jessie, Bryant, Catherine, and Rasheed, Michael (2015) Development of seagrass indicators for the Gladstone Healthy Harbour Partnership report card. Report. James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Sankey, Tonia, Jarvis, Jessie, Bryant, Catherine, and Rasheed, Michael (2015) Long term seagrass monitoring in Port Curtis: quarterly permanent transect monitoring progress report 2009 to 2014. Report. James Cook University, Cairns, QLD, Australia.

Jarvis, J.C., Scott, E.L., Bryant, C.V., and Rasheed, M.A. (2015) Port Curtis seagrass seed bank density and viability studies: year 1. Report. James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Chartrand, K.M., Jarvis, J.C., Carter, A.B., Davies, J.C., and Rasheed, M.A. (2015) Port of Abbot Point: initial light thresholds for modelling impacts to seagrass from the Abbot Point Growth Gateway Project. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McCook, L., Schaffelke, B., Apte, S., Brinkman, R., Brodie, J., Erftemeijer, P., Eyre, B., Hoogerwerf, F., Irvine, I., Jones, R., King, B., Marsh, H., Masini, R., Morton, R., Pitcher, R., Rasheed, M., Sheaves, M., Symonds, A., and Warne, M.St.J. (2015) Synthesis of current knowledge of the biophysical impacts of dredging and disposal on the Great Barrier Reef: report of an Independent Panel of Experts. Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring August - October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait mapping: seagrass consolidation: 2002-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., York, P.Y., and Rasheed, M.A. (2014) The effects of climate on seagrasses in the Torres Strait: 2011-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Reason, Carissa (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring May - July 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait dugong sanctuary: deepwater seagrass monitoring 2010-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Thursday Island: March 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Tasker, Zoe (2014) Gladstone Western Basin Post Dredge BPAR Monitoring March - May 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, C., Davies, J.D., Jarvis, J.C., Tol, S., and Rasheed, M. (2014) Seagrasses in Port Curtis & Rodds Bay 2013: annual long term monitoring, biannual western basin surveys & updated baseline survey. Report. TropWATER, James Cook University, Cairns.

Bryant, C.V., and Tasker, Z. (2014) Gladstone Western Basin Post Dredge BPAR Monitoring December 2013 - February 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

York, P.H., Davies, J.N., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Mourilyan: 2013. Report. TropWATER, James Cook University, Cairns.

Jarvis, J.C., Rasheed, M.A., McKenna, S.A., and Sankey, T. (2014) Seagrass habitat of Cairns Harbour and Trinity Inlet: annual and quarterly monitoring report 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2014) Port of Abbot Point long-term seagrass monitoring: annual report 2012-2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Port of Karumba long-term seagrass monitoring: November 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2014) Port of Abbot Point proposed dredge footprint: seagrass survey: December 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, J.N., McKenna, S.A., Jarvis, J.C., Carter, A.B., and Rasheed, M.A. (2014) Port of Townsville annual monitoring and baseline survey: October 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., Carter, A.B., and McKenna, S.A. (2014) Port of Weipa long-term seagrass monitoring: September 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2014) Critical marine habitats in high risk areas, South Warden Reef to Howick Group region: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Schliep, M., Rasheed, M., Bryant, C., Chartrand, K., York, P., Petrou, K., and Ralph, P. (2014) Development of a molecular biology toolkit to monitor dredging-related stress in Zostera muelleri ssp. capricorni in the Port of Gladstone: interim report. Report. James Cook University, Cairns, QLD, Australia.

Collier, Catherine J., Devlin, Michelle, Langlois, Lucas, McKenzie, Len J., Petus, Caroline, Da Silva, Eduardo Teixeira, McMahon, Kathryn, Adams, Matthew, O'Brien, Kate, Statton, John, and Waycott, Michelle (2014) Final report on thresholds and indicators of declining water quality as tools for tropical seagrass management. Report. James Cook University, Townsville, Australia.

Bryant, Catherine, Jarvis, Jessie, York, Paul, and Rasheed, Michael (2014) Gladstone Healthy Harbour Partnership Pilot Report Card. ISP011: seagrass final report. Report. TropWATER, Cairns, QLD, Australia.

Bryant, C., Davies, J., Sankey, T., Jarvis, J., and Rasheed, M. (2014) Long Term Seagrass Monitoring in Port Curtis: quarterly seagrass assessments & permanent transect monitoring progress report 2009 to 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report December 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report November 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report October 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Jarvis, J.C., McKenna, S.A., and Rasheed, M.A. (2013) Seagrass habitat of Cairns Harbour and Trinity Inlet: sediment seed bank analysis. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Carter, A.B., Davies, J.N., McKenna, S.A., Reason, C.L., and Rasheed, M.A. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2013 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Lewis, S.E., Tol, S.J., and Sankey, T. (2013) Abbot Point proposed dredge disposal areas: benthic habitat survey: 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, Amies, Rachel, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: September 2013 update report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Sankey, T., and Tol, S.J. (2013) Benthic macro-invertebrates of Cairns Harbour and Trinity Inlet: survey: 2012/13. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report August 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report July 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., Carter, A.B., Reason, C.L., and Loban, F. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2012 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report June 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report May 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Port Curtis and Rodds Bay Seagrass Monitoring Program. Biannual western basin & annual long term monitoring November 2012. Report. TropWATER, James Cook University, Cairns.

Rasheed, M.A., McKenna, S.A., and Tol, S. (2013) Seagrass habitat of Cairns Harbour and Trinity Inlet: annual monitoring and updated baseline survey. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report April 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Long-term seagrass monitoring in the Port of Mourilyan: 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report March 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McCormack, Catherine, Rasheed, Michael, Davies, Jaclyn, Carter, Alexandra, Sankey, Tonia, and Tol, Samantha (2013) Long term seagrass monitoring in the Port Curtis western basin: quarterly seagrass assessments & permanent transect monitoring progress report: November 2009 to November 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Port of Karumba long-term seagrass monitoring: October 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, McKenna, Skye, and Rasheed, Michael (2013) Port of Townsville long-term seagrass monitoring: September 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2013) Port of Weipa long‐term seagrass monitoring: August 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report February 2013. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: January 2013 update report. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Port of Abbot Point long-term seagrass monitoring: annual report 2011-2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Brodie, Jon, Waterhouse, Jane, Maynard, Jeffrey, Bennett, John, Furnas, Miles, Devlin, Michelle, Lewis, Stephen, Collier, Catherine, Schaffelke, Britta, Fabricius, Katharina, Petus, Caroline, da Silva, Eduardo, Zeh, Daniel, Randall, Lucy, Brando, Vittorio, McKenzie, Len, O'Brien, Dominique, Smith, Rachael, Warne, Michael, Brinkman, Richard, Tonin, Hemerson, Bainbridge, Zoe, Bartley, Rebecca, Negri, Andrew, Turner, Ryan, Davis, Aaron, Bentley, Christie, Mueller, Jochen, Alvarez-Romero, Jorge, Henry, Nyssa, Waters, David, Yorkston, Hugh, and Tracey, Dieter (2013) Assessment of the relative risk of water quality to ecosystems of the Great Barrier Reef. A report to the Department of the Environment and Heritage Protection, Queensland Government, Brisbane - Report 13/28. Report. James Cook University, Townsville, QLD, Australia.

Albert, Joelle, Schwarz, Anne-Maree, and Cohen, Philippa (2013) Community-based marine resource management in Solomon Islands: a facilitators guide. Manual. WorldFish, Penang, Malaysia.

Carter, Alex, Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2013) Critical marine habitats in high risk areas, Torres Strait: Seo Reef to Kai-Wareg Reef: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2013) Critical marine habitats in high risk areas: Bathurst Bay region: 2012 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: December 2012 update report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: September 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Sankey, T.L., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: July 2012 update report. Report. Department of Agriculture Fisheries and Forestry, QLD, Cairns, QLD, Australia.

McCormack, Catherine, and Rasheed, Michael (2012) Gladstone Permanent Transect Seagrass Monitoring: May 2012 interim update report. Report. Department of Agriculture, Fisheries and Forestry, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: April 2012 interim update report. Report. Department of Agriculture, Fisheries and Forestry, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: March 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: February 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: January 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Carter, Alex, Chartrand, Katie, and Rasheed, Michael (2012) Critical marine habitats in high risk areas: Princess Charlotte Bay region: 2011 atlas. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

McCormack, C.V., Rasheed, M.A., and Carter, A.B. (2012) Effects of Shading on Zostera capricorni in the Gladstone Western Basin During the Senescent Season: April - July 2012. Report. Department of Agriculture, Fisheries and Forestry, Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., Carter, A.B., Rasheed, M.A., and Davies, J.N. (2012) Gladstone Permanent Transect Seagrass Monitoring: August 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

McCormack, C.V., Carter, A.B., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: June 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: November 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: October 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McKenna, S.A., Rasheed, M.A., and Taylor, H.A. (2012) Long-term seagrass monitoring in the Port of Thursday Island: February 2012. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Rasheed, M.A., Reason, C.L., McCormack, C.V., Chartrand, K.M., and Carter, A.B. (2012) Port Curtis and Rodds Bay seagrass monitoring program: November 2011. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2012) Port of Karumba long-term seagrass monitoring: November 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2012) Port of Townsville long-term seagrass monitoring: October 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2012) Port of Weipa long-term seagrass monitoring: 2000-2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McCormack, C.V., and Chartrand, K.M. (2011) Gladstone Permanent Transect Seagrass Monitoring: December 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: November 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: October 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: additional September 2011 assessment update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., Hedge, S.A.M., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: July 2011 update. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Sankey, T.L., Hedge, S.A., McKenzie, L.J., McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: April 2011 update. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Fairweather, C.L., McKenna, S.A., and Rasheed, M.A. (2011) Long-term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2009 and 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Fairweather, C.L., McKenna, S.A., and Rasheed, M.A. (2011) Long-term seagrass monitoring in the Port of Mourilyan: November 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Chartrand, K.M., McCormack, C.V., and Rasheed, M.A. (2011) Port Curtis and Rodds Bay seagrass monitoring program, November 2010. Report. Department of Employment, Economic Development and Innovation, QLD, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2011) Port of Abbot Point long-term seagrass monitoring: interim report 2008-2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2011) Port of Karumba long-term seagrass monitoring: October 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McCormack, C.V., Rasheed, M.A., and Unsworth, R.K.F. (2011) Port of Weipa Long Term Seagrass Monitoring: September 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., and Carter, A. (2011) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: interim report 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, A., McKenna, S.A., and Rasheed, M.A. (2011) Seagrass, algae and macro-invertebrate survey for proposed channel extension in the Port of Weipa. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Taylor, Helen, McCormack, Catherine, and Rasheed, Michael (2010) Critical Marine Habitats in High Risk Areas. Torres Strait: Moa Island to Mabuiag Island, 2010 atlas. Report. Queensland Government Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2010) Long term seagrass monitoring in the Port of Thursday Island: February 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Chartrand, K.M., McKenna, S.A., Petrou, K., Jimenez-Denness, I.M., Franklin, J., Sankey, T.L., Hedge, S.A., Rasheed, M.A., and Ralph, P.J. (2010) Port Curtis benthic primary producer habitat assessment and health studies update: interim report December 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2010) Port of Weipa long term seagrass monitoring: September 2009. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2010) Seasonal dynamics, productivity and resilience of seagrass at the Port of Abbot Point: 2008-2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Unsworth, R.K.F., Taylor, H.A., Chartrand, K.M., and Sankey, T.L. (2009) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, Skye, and Rasheed, M.A. (2009) Port of Karumba long term seagrass monitoring: October 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., Sankey, T.L., and Taylor, H.A. (2008) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: November 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., Taylor, H.A., and Sankey, T.L. (2008) Long term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Sankey, T.L., and Taylor, H.A. (2008) Long term seagrass monitoring in the Port of Mourilyan: November 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2008) Long term seagrass monitoring in the Port of Thursday Island: March 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Unsworth, R.K.F., and Chartrand, K.M. (2008) Port of Abbot Point seagrass baseline surveys: wet & dry season 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Coles, Robert, McKenzie, Len, Rasheed, Michael, Mellors, Jane, Taylor, Helen, Dew, Kara, McKenna, Skye, Sankey, Tonia, Carter, Alexandra, and Grech, Alana (2007) Status and trends of seagrass habitats in the Great Barrier Reef World Heritage Area. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael, Taylor, Helen, Dew, Kara, Carter, Alex, and Sankey, Tonia (2007) Deepwater seagrass dynamics in Hay Point: measuring variability and monitoring impacts of capital dredging. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Butler, Barry, and Burrows, Damien W. (2007) Dissolved Oxygen Guidelines for Freshwater Habitats of Northern Australia. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Rasheed, M.A., Dew, K.R., McKenna, S.A., Sankey, T.L., Taylor, H.A., and Carter, A. (2007) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2006. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, and Sankey, Tonia (2007) Long term seagrass monitoring in the Port of Mourilyan: November 2006. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, and Thomas, Ross (2007) Long-term seagrass monitoring in the Port of Mourilyan: November 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Pitcher, Roland, Haywood, Mick, Hooper, John, Coles, Rob, Bartlett, Chris, Browne, Matthew, Cannard, Toni, Carini, Giovannella, Carter, Alexandra, Cheers, Sue, Chetwynd, Doug, Cook, Stephen, Davie, Peter, Ellis, Nick, Fellegara, Ida, Forcey, Karl, Furey, Melodyrose, Gledhill, Dan, Hendriks, Patricia, Jacobsen, Ian, Johnson, Jeff, Jones, Michelle, Last, Peter, Marks, Shona, McLeod, Ian, Sheils, Jacquie, Sheppard, James, Smith, Greg, Strickland, Colleen, Van der Geest, Claire, Venables, Bill, Wassenberg, Ted, and Yearsley, Gus (2007) Mapping and characterisation of key biotic and physical attributes of the Torres Strait ecosystem: CRC-TS task number: T2.1 final report. Report. CSIRO Marine and Atmospheric Research, Cleveland, QLD, Australia.

Carter, Alex B., Sheppard, James K., Coles, Robert G., and McKenzie, Len J. (2007) Sub-tidal seagrasses of the Torres Strait: spatial patterns and nutritional value for marine herbivores. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Moore, Kenneth A., and Jarvis, Jessie C. (2007) Using seeds to propagate and restore Vallisneria americana Michaux (Wild Celery) in the Chesapeake Bay. Report. U.S. Army Engineer Research and Development Center, Vicksburg, Mississippi, USA.

Roelofs, Anthony, Rasheed, Michael, Thomas, Ross, McKenna, Skye, and Taylor, Helen (2006) Port of Weipa long term seagrass monitoring: 2003-2005. Report. Ports Corporation of Queensland, Cairns, QLD, Australia.

Thomas, R., Rasheed, M.A., and McKenna, S.A. (2005) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., and Thomas, R. (2005) Long-term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October/November 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2005) Port of Abbot Point seagrass, algae and benthic macro-invertebrate community survey: March 2005. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael, and McKenna, Skye (2005) Port of Karumba long term seagrass monitoring: progress report: October 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Lockie, S., and Rockloff, S.F. (2005) Stakeholder analysis of coastal zone and waterway stakeholders in the Port Curtis and Fitzroy Catchments of Central Queensland. Report. CRC Coastal Zone Estuary and Waterway Management and Central Queensland University, Indooroopilly, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2004) Port of Hay Point seagrass, algae and benthic macro-invertebrate community survey: July 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Conference Item

Waters, D.K., and Lewis, S.E. (2017) Calculating sediment trapping efficiency for reservoirs in series. In: Proceedings of the 22nd International Congress on Modelling and Simulation. pp. 1990-1996. From: MODSIM 2017: 22nd International Congress on Modelling and Simulation, 3-8 December 2017, Hobart, TAS, Australia.

McKenna, S., Carter, A., Bryant, C., Jarvis, J., and Rasheed, M. (2016) Establishing indicators for a report card in a complex marine ecosystem. In: Abstracts from 13th International Coral Reef Symposium. pp. 221-222. From: ICRS 2016: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Macreadie, Peter, York, Paul, Rasheed, Michael, Bryant, Catherine, Ricart, Aurora, Nielsen, Daniel, Fontes, Maria, Atwood, Tricia, Seymour, Justin, Petrou, Katherina, Kelleway, Jeffrey, Thomson, Alexandra, Trevathan-Tackett, Stacey, Connolly, Rod, and Ralph, Peter (2015) Hot spots and hot moments in seagrass 'blue carbon' science. In: Abstracts from 52nd Australian Marine Science Association Conference. p. 206. From: AMSA 2015: Australian Marine Science Association: Estuaries to Oceans, 5-9 July 2015, Geelong, Victoria.

Devlin, Michelle J., Petus, Caroline, Da Silva, Eduardo, Tracey, Dieter, Wolff, Nicholas, Brodie, Jon, Waterhouse, Jane, and Martin, Katherine (2015) Improvements to water quality monitoring through the inclusion of ocean colour products correlated with in-situ water quality gradients for the Great Barrier Reef. In: Posters from the International Ocean Colour Science meeting. From: IOCS 2015: Second International Ocean Colour Science Meeting, 15-18 June 2015, San Fransisco, CA, USA.

Carter, Alex, Bryant, Catherine, Jarvis, Jessie, York, Paul, and Rasheed, Michael (2015) Developing thresholds and indicators of seagrass meadow condition using long-term monitoring data. In: Abstracts from the 52nd Australian Marine Science Association Annual Conference. p. 90. From: AMSA 2015: 52nd Australian Marine Science Association Annual Conference, 5-9 July 2015, Geelong, VIC, Australia.

McKenna, Skye, Rasheed, Michael, Coles, Robert, Carter, Alex, Jarvis, Jessie, York, Paul, Davies, Jaclyn, and Bryant, Catherine (2015) Reaping the benefits (and costs) of monitoring seagrass in Queensland Ports. In: Abstracts from the 52nd Australian Marine Science Association Annual Conference. p. 215. From: AMSA 2015: 52nd Australian Marine Science Association Annual Conference, 5-9 July 2015, Geelong, VIC, Australia.

Waterhouse, Jane, Brodie, Jon, Petus, Caroline, and Wolanski, Eric (2014) Hazard assessment for water quality threats to Torres Strait marine waters and ecosystems. In: Abstracts from the Society for Conservation Biology Oceania Conference. p. 102. From: Society for Conservation Biology Oceania Conference, 9-11 July 2014, Suva, Fiji.

Stieglitz, Thomas (2014) Groundwater-ocean interaction and its effects on coastal ecological processes: are there groundwater-dependant ecosystems in the coastal zone? In: Abstracts from Goldschmidt 2014. p. 2385. From: Goldschmidt 2014 Conference, 8-13 June 2014 , Sacramento, CA, USA.

Davies, Jaclyn, McCormack, Catherine, McKenna, Skye, Taylor, Helen, and Rasheed, Michael (2013) Productive capacities of tropical seagrasses communities at three locations along the East Coast of Queensland and their potential for carbon sequestration. In: 50th Australian Marine Sciences Association annual conference: shaping the future: abstracts. p. 108. From: AMSA 2013 Shaping the Future: 50th Annual Conference of the Australian Marine Sciences Association, 1-7 July 2013, Gold Coast, Queensland.

Robson, Barbara J., and Dourdet, Vincent (2013) Incorporating a generalised additive model of river nutrient concentrations into a mechanistic receiving water model. In: Proceedings of the 20th International Conference on Modelling and Simulation. pp. 373-379. From: MODSIM2013: 20th International Congress on Modelling and Simulation, 1-6 December 2013, Adelaide, SA, Australia.

McKenna, Skye, Rasheed, Michael, Carter, Alexandra, and McCormack, Catherine (2013) Long-term effects of major climatic events on the resilience and capacity for recovery of a tropical seagrass habitat. In: Abstracts from the 50th Australian Marine Science Association Annual Conference. p. 169. From: AMSA 2013: 50th Australian Marine Science Association Annual Conference, 7-11 July 2013, Gold Coast, QLD, Australia.

Chartrand, Katie, McCormack, Catherine, and Rasheed, Michael (2012) Implementing a light-based seagrass management approach for a large scale dredging program. In: Proceedings of the 10th International Seagrass Biology Workshop. 01.2. p. 24. From: 10th International Seagrass Biology Workshop, 25 - 30 November 2012, Armação dos Búzios, Brazil.

McCormack, Catherine, Chartrand, Katie, and Rasheed, Michael (2012) Impacts of a large-scale flood event on sub-tropical intertidal seagrass meadows. In: Coast to Coast 2012: living on the edge: program and abstract book. p. 73. From: Coast to Coast 2012: Living on the Edge, 17-21 September 2012, Brisbane, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Da Silva, Eduardo, Alvarez Romero, Jorge G., Waterhouse, Jane, and McKenzie, Len (2012) Extreme weather conditions in the Great Barrier Reef: drivers of change? In: Proceedings of the 12th International Coral Reef Symposium. 21A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, Carter, Alex, Reason, Carissa, and Taylor, Helen (2012) Long-term effects of flooding events on the resilience and recovery of tropical seagrass habitats. In: [Presented at the 10th International Seagrass Biology Workshop]. From: ISBW10: 10th International Seagrass Biology Workshop, 25-30 November 2012, Armação dos Búzios, Brazil.

Carter, Alex, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2012) Reproductive benefits of no-take reserves vary atitudinally for Plectropomus leopardus. In: Abstracts from the 12th International Coral Reef Symposium. pp. 259-260. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Heron, M.L., Savidge, Dana, and Blanton, Jack (2012) VHF radar measurements of flow in a salt marsh creek. In: Oceans. pp. 1-5. From: Oceans 2012, 14-19 October 2012, Hampton Road, VA, USA.

Petrou, Katherina, Jimenez-Denness, Isabel, Chartrand, Katie, Bryant, Catherine, Rasheed, Michael, and Ralph, Peter (2011) The influence of light and tidal exposure on primary production in the tropical seagrass Zostera capricorni and Halophila ovalis. In: 48th Australian Marine Sciences Association annual conference: crossing boundaries: abstracts. p. 113. From: AMSA 2011 Crossing Boundaries: 48th Annual Conference of the Australian Marine Sciences Association, 3–7 July 2011, Fremantle, Western Australia, Australia.

Hateley, Louise, Nelson, P.N., and Amiotte-Suchet, P. (2011) δ13C provides a robust indicator of the sources of suspended sediment in a tropical river traversing forested and agricultural land. In: Abstracts from 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference. p. 36. From: 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, 12-14 July 2011, Cairns, QLD, Australia.

Stieglitz, T., and Ridd, P. (2011) Of holes and depressions on the great barrier reef coast - and a physict's toolbox to study them. In: Abstracts from the Third Nereis Park Conference: benthic processes in a globally changing environment. pp. 29-30. From: Third Nereis Park Conference: benthic processes in a globally changing environment, 29-31 August 2011, Kristineberg, Sweden.

Stieglitz, T.C., Hancock, G., Clarke, J., and Cook, P.G. (2011) Radioisotopes and coastal research in the Great Barrier Reef. In: Abstracts from 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference. pp. 106-107. From: 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, 12-14 July 2011, Cairns, QLD, Australia.

Stieglitz, T.C., Clark, J., and Hancock, G. (2011) Rapid seawater circulation through animal burrows in mangrove forests: a significant source of saline groundwater to the tropical coastal ocean. In: Goldschmidt Conference Abstracts. p. 1944. From: Goldschmidt 2011 Earth, Life and Fire, 14-19 August 2011, Prague, Czech Republic.

Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2011) Seasonal dynamics, productivity and resilience of tropical deepwater seagrasses and their implications for port developments. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association. p. 138. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Carter, Alex, Carton, Guy, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2011) Significant variation in spawning frequency of common coral trout, Plectropomus leopardus, on the Great Barrier Reef. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association. p. 35. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Chen, Y., Minchin, S.A., Seaton, S., Joehnk, K.D., Robson, B. J., and Bai, Q. (2011) eReefs - a new perspective on the Great Barrier Reef. In: Proceedings of the 19th International Congress on Modelling and Simulation. pp. 1195-1201. From: MODSIM 2011: 19th International Congress on Modelling and Simulation, 12-16 December 2011, Perth, WA, Australia.

McKenna, Skye, Rasheed, Michael A., Taylor, Helen, and Chartrand, Katie (2010) Understanding tropical seagrass light requirements and resilience to effectively manage seagrass health during major dredging projects. In: [Presented at the 9th World Seagrass Conference]. From: 9th World Seagrass Conference, 21-25 November 2010, Phuket, Thailand.

Carter, Alexandra, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2009) Regional variation in the benefit of no-take marine reserves on reproductive output of the common coral trout, Plectropomus leopardus. In: Abstracts from the Australian National Network in Marine Science Inaugural Conference. From: ANNIMS 2009: Australian National Network in Marine Science Inaugural Conference, 1-2 December 2009, Hobart, TAS, Australia.

Duke, Norman C. (2008) Conservation and management of mangroves in Australasia. In: Proceedings of the International Conferencea and Exhibition on the Mangroves of Indian and Western Pacific Oceans. pp. 26-38. From: International Conference and Exhibition on the Mangroves of Indian and Western Pacific Oceans, 21-24 August 2006, Kuala Lumpur, Malaysia.

Taylor, H.A., Rasheed, M.A., Sankey, T.L, and McKenna, S.A. (2008) Dynamics of a tropical deepwater seagrass community during a major dredging campaign. In: [Presented at Coast to Coast 2008]. From: Coast to Coast 2008, 18-22 August 2008, Darwin, NT, Australia.

McKenna, S.A., Rasheed, M.A., Taylor, H.A., and Sankey, T.L. (2008) Implementing community based seagrass monitoring in the Wellesley Island Group. In: [Presented at Coast to Coast 2008]. From: Coast to Coast 2008, 18-22 August 2008, Darwin, NT, Australia.

Pinheiro Andutta, Fernando, de Miranda, Luiz Bruner, de Castro, Belmiro Mendes, Fontes, Roberto Fioravanti Carelli, and Ramos e Silva, Carlos Augusto (2008) Numerical simulation of the hydrodynamic in the Curimataú estuary, RN Brazil. In: Proceedings of the III Simposio Brasileiro de Oceanografia. pp. 545-558. From: III Simposio Brasileiro de Oceanografia, 2006, Sao Paulo, Brazil.

Andutta, Fernando Pinheiro, dos Santos, Michael R.M., De Miranda, Luiz Bruner, Ancona, Cintia M., Saldanha-Corrêa, Flávia M.P., and Gianesella, Sônia M.F. (2006) Monthly variations of physical and chemical properties observed in Santos Bay and Santos Estuarine channel. In: Proceedings of the Environmental and Health World Congress. pp. 80-84. From: EHWC 2006: Environmental and Health World Congress, 16-19 July 2006, Santos, Brazil.

Cooper, Michelle, Faithful, John W., and Shields, Graham (2005) Sediment dynamics of a large tropical river system: the Burdekin River and Lake Dalrymple, Australia. In: Proceedings of 10th International Symposium on the interactions between sediments and water. p. 198. From: 10th International Symposium on the interactions between sediments and water, 28 August - 2 September 2005, Bled, Slovenia.

Book

Wolanski, Eric (2014) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands.

Heimann, Kirsten, and Katsaros, Christos (2013) Advances in Algal Cell Biology. Marine and Freshwater Botany . Walter de Gruyter, Berlin, Germany.

Wolanski, Eric (2006) The Environment in Asia Pacific Harbours. Springer, Dordrecht, The Netherlands.

Thesis

Bradley, Michael (2019) Context dependence in the habitat relationships of coastal and marine fishes. PhD thesis, James Cook University.

Jones, Karina (2019) Environmental influences on the epidemiology of fibropapillomatosis in green turtles (Chelonia mydas) and consequences for management of inshore areas of the Great Barrier Reef. PhD thesis, James Cook University.

Lau, Jacqueline (2019) 'The reef is our garden' expanding analysis of ecosystem services in coastal communities. PhD thesis, James Cook University.

Buelow, Christina Amy (2017) Integrated assessment of ecosystem connectivity and functioning: coastal forest avifauna of northeast Australia. PhD thesis, James Cook University.

Mattone, Carlo (2016) Benthic infauna of mangrove forests: dissolved oxygen and environmental settings determine their community composition and function. PhD thesis, James Cook University.

Ryan, Emma Jean (2016) Fringing reef growth on the central Great Barrier Reef: signatures of sea-level change, storms and sedimentation. PhD thesis, James Cook University.

Brandl, Simon Johannes (2016) Functional niche partitioning in herbivorous coral reef fishes. PhD thesis, James Cook University.

Brodie, Jon E. (2016) Terrestrial pollutant runoff to the Great Barrier Reef: effects, causes, sources and management. PhD thesis, James Cook University.

Wilkinson, Adam David (2015) Development of a miniature seagrass bioassay for PSII herbicides and its application to mixtures and simultaneous stressors. Masters (Research) thesis, James Cook University.

Macdonald, Rachael K. (2015) Turbidity and light attenuation in coastal waters of the Great Barrier Reef. PhD thesis, James Cook University.

Stegemann, Krista Elizabeth (2013) Spatio-temporal patterns of faunal distribution along a near-pristine estuarine edge environment. Masters (Research) thesis, James Cook University.

Davis, Aaron Marshall (2012) Dietary ecology of terapontid grunters (Pisces: Terapontidae) with particular reference to ontogeny and phylogeny. PhD thesis, James Cook University.

Berg Soto, Alvaro (2012) Evaluation of different management approaches to reduce the bycatch of Indo-Pacific humpback dolphins (Sousa chinensis) and Australian snubfin dolphins (Orcaella heinsohni) in Queensland, Australia. PhD thesis, James Cook University.

Fingerlos, Franz Martin (2012) Long-term variations in bycatch reduction device (BRD) effectiveness and trawl catch rates in a tropical fish assemblage. Masters (Research) thesis, James Cook University.

Rivera Posada, Jairo A. (2012) Pathogenesis of crown-of-thorns starfish (Acanthaster planci L). PhD thesis, James Cook University.

Jorgensen, Diane Clare (2012) Quaternary stratigraphy, palaeowinds and palaeoenvironments of carbonate aeolianite on the Garden Island Ridge and in the Naturaliste-Leeuwin region, southwest Western Australia. PhD thesis, James Cook University.

Vermeiren, Peter Elisa Juliaan (2012) A landscape level understanding of habitat associations to integrate intertidal crabs into ecosystem models of tropical estuaries. PhD thesis, James Cook University.

Ho, Van Trung Thu (2011) Achieving more effective governance in multi-jurisdictional marine protected areas in Vietnam. PhD thesis, James Cook University.

Haapkylä, Jessica (2011) Dynamics and drivers of coral disease on Indo-Pacific reefs. PhD thesis, James Cook University.

Botte, Emmanuelle (2011) Effects of pesticide exposure and thermal stress in a model tropical reef fish, the damselfish Acanthochromis polyacanthus. PhD thesis, James Cook University.

Adams, Vanessa Marie (2011) Incorporating socio-economic considerations into systematic conservation planning. PhD thesis, James Cook University.

Schuttenberg, Heidi Zabriskie (2010) Understanding and strengthening effective coral reef governance: a map & compass to guide strategic change in Southeast Asia. PhD thesis, James Cook University.

Pearcy, Ashley Grace (2007) The para grass city, where the grass is green and the snakes are pretty: the ecology of Herpetofauna in an invaded wetland. Masters (Research) thesis, James Cook University.

Salkeld, Daniel Joseph (2004) The ecology of a host-parasite relationship: haemogregarines and the eastern water skink, Eulamprus quoyii. PhD thesis, James Cook University.

Calvert, Gregor Alan (2001) The effects of cattle grazing on vegetation diversity and structural characteristics in the semi-arid rangelands of North Queensland. PhD thesis, James Cook University.

Rosser, Zoe Catherine (1998) The role of disturbance in community dynamics and structuring of tropical rainforest stream communities. PhD thesis, James Cook University.