Article

Syahidah, Dewi, Elliman, Jennifer, Constantinoiu, Constantin, and Owens, Leigh (2018) Vero cell lines expressing nuclear location signals of Penaeus merguiensis hepandensovirus: an early study. Asian Journal of Advances in Research, 1 (1). pp. 1-10.

Colmant, Agathe M.G., Etebari, Kayvan, Webb, Cameron E., Ritchie, Scott A., Jansen, Cassie C., van den Hurk, Andrew F., Bielefeldt-Ohmann, Helle, Hobson-Peters, Jody, Asgari, Sassan, and Hall, Roy A. (2017) Discovery of new orbiviruses and totivirus from Anopheles mosquitoes in Eastern Australia. Archives of Virology, 162 (11). pp. 3529-3534.

Weynberg, Karen D., Voolstra, Christian R., Neave, Matthew J., Buerger, Patrick, and van Oppen, Madeleine J.H. (2015) From cholera to corals: viruses as drivers of virulence in a major coral bacterial pathogen. Scientific Reports, 5. 17889. pp. 1-9.

Bochow, Shaun, Condon, Kelly, Elliman, Jennifer, and Owens, Leigh (2015) First complete genome of an Ambidensovirus; Cherax quadricarinatus densovirus, from freshwater crayfish Cherax quadricarinatus. Marine Genomics, 24 (3). pp. 305-312.

Jeanne, Nicolas, Saliou, Adrien, Carcenac, Romain, Lefebvre, Caroline, Dubois, Martine, Cazabat, Michelle, Nicot, Florence, Loiseau, Claire, Raymond, Stéphanie, Izopet, Jacques, and Delobel, Pierre (2015) Position-specific automated processing of V3 env ultra-deep pyrosequencing data for predicting HIV-1 tropism. Scientific Reports, 5. 16944. pp. 1-10.

Elliott, Lisa, and Owens, Leigh (2015) CART analysis of environmental factors, biomarkers and gill-associated virus to predict production outcomes for farmed Penaeus monodon. Aquaculture, 448. pp. 298-305.

Jaroenram, Wansadaj, Chaivisuthangkura, Parin, and Owens, Leigh (2015) One base pair deletion and high rate of evolution: keys to viral accommodation of Australian Penaeus stylirostris densovirus. Aquaculture, 443. pp. 40-48.

Rusaini, and Owens, Leigh (2015) Expressed genes in the lymphoid organ of broodstock banana prawn (Penaeus merguiensis) using suppression subtractive hybridization. Journal of Aquaculture & Marine Biology, 2 (1). 00016. pp. 1-9.

Owens, Leigh, Condon, Kelly, Rai, Praveen, and Karunasagar, Indrani (2015) Diet-delivery of therapeutic RNA interference in live Escherichia coli against pre-existing Penaeus merguiensis hepandensovirus in Penaeus merguiensis. Aquaculture, 437. pp. 360-365.

Akhila, Dharnappa Sannejal, Mani, Madhu K., Rai, Praveen, Condon, Kelly, Owens, Leigh, and Karunasagar, Indrani (2015) Antisense RNA mediated protection from white spot syndrome virus (WSSV) infection in Pacific white shrimp Litopenaeus vannamei. Aquaculture, 435. pp. 306-309.

Walker, Peter J., Firth, Cadhla, Widen, Steven G., Blasdell, Kim R., Guzman, Hilda, Wood, Thomas G., Paradkar, Prasad N., Holmes, Edward C., Tesh, Robert B., and Vasilakis, Nikos (2015) Evolution of genome size and complexity in the Rhabdoviridae. PLoS Pathogens, 11 (2). e1004664.

Walker, Peter J., Widen, Stephen G., Firth, Cadhla, Blasdell, Kim R., Wood, Thomas G., Travassos da Rosa, Amelia P.A., Guzman, Hilda, Tesh, Robert B., and Vasilakis, Nikos (2015) Genomic characterization of Yogue, Kasokero, Issyk-Kul, Keterah, Gossas, and Thiafora Viruses: Nairoviruses naturally infecting bats, shrews, and ticks. American Journal of Tropical Medicine and Hygiene, 93 (5). pp. 1041-1051.

Blasdell, Kim R., Widen, Steven G., Wood, Thomas G., Holmes, Edward C., Vasilakis, Nikos, Tesh, Robert B., Walker, Peter J., Guzman, Hilda, and Firth, Cadhla (2015) Ledantevirus: a proposed new genus in the Rhabdoviridae has a strong ecological association with bats. American Journal of Tropical Medicine and Hygiene, 92. pp. 405-410.

Mohr, Peter G., Moody, Nicholas J.G., Hoad, John, Williams, Lynette M., Bowater, Rachel O., Cummins, David M., Cowley, Jeff A., and Crane, Mark StJ. (2015) New yellow head virus genotype (YHV7) in giant tiger shrimp Penaeus monodon indigenous to northern Australia. Diseases of Aquatic Organisms, 115. pp. 263-268.

Rupprecht, C.E., and Burgess, G.W. (2015) Viral and vector zoonotic exploitation of a homo-sociome memetic complex. Clinical Microbiology and Infection, 21 (5). pp. 394-403.

Jaroenram, Wansadaj, and Owens, Leigh (2014) Recombinase polymerase amplification combined with a lateral flow dipstick for discriminating between infectious Penaeus stylirostris densovirus and virus-related sequences in shrimp genome. Journal of Virological Methods, 208. pp. 144-151.

Pollock, F. Joseph, Wood-Charlson, Elisha M., van Oppen, Madeleine J.H., Bourne, David G., Willis, Bette L., and Weynberg, Karen D. (2014) Abundance and morphology of virus-like particles associated with the coral Acropora hyacinthus differ between healthy and white syndrome-infected states. Marine Ecology - Progress Series, 510. pp. 39-43.

Nguyen, Kim Y., Sakuna, Kitikarn, Kinobe, Robert, and Owens, Leigh (2014) Ivermectin blocks the nuclear location signal of parvoviruses in crayfish, Cherax quadricarinatus. Aquaculture, 420-421. pp. 288-294.

Blasdell, Kim R., Widen, Steven G., Diviney, Sinéad M., Firth, Cadhla, Wood, Thomas G., Guzman, Hilda, Holmes, Edward C., Tesh, Robert B., Vasilakis, Nikos, and Walker, Peter J. (2014) Koolpinyah and Yata viruses: two newly recognised ephemeroviruses from tropical regions of Australia and Africa. Veterinary Microbiology, 174 (3-4). pp. 547-553.

Vasilakis, Nikos, Guzman, Hilda, Firth, Cadhla, Forrester, Naomi L., Widen, Steven G., Wood, Thomas G., Rossi, Shannan L., Ghedin, Elodie, Popov, Vsevolov, Blasdell, Kim R., Walker, Peter J., and Tesh, Robert B. (2014) Mesoniviruses are mosquito-specific viruses with extensive geographic distribution and host range. Virology Journal, 11. 97.

Jaroenram, Wansadaj, and Owens, Leigh (2014) Separation of endogenous viral elements from infectious Penaeus stylirostris densovirus using recombinase polymerase amplification. Molecular and Cellular Probes, 28 (5-6). pp. 284-287.

Owens, Leigh (2013) Bioinformatical analysis of nuclear localisation sequences in penaeid densoviruses. Marine Genomics, 12. pp. 9-15.

Delobel, P., Cazabat, M., Saliou, A., Loiseau, C., Coassin, L., Raymond, S., Requena, M., Marchou, B., Massip, P., and Izopet, J. (2013) Primary resistance of CCR5-tropic HIV-1 to maraviroc cannot be predicted by the V3 sequence. Journal of Antimicrobial Chemotherapy, 68 (11). pp. 2506-2514.

Busico-Salcedo, Nancy, and Owens, Leigh (2013) Virulence changes to Harveyi clade bacteria infected with bacteriophage from Vibrio owensii. Indian Journal of Virology, 24 (2). pp. 180-187.

Quan, Phenix-Lan, Firth, Cadhla, Conte, Juliette M., Williams, Simon H., Zambrana-Torrelio, Carlos M., Anthony, Simon J., Ellison, James A., Gilbert, Amy T., Kuzmin, Ivan V., Niezgoda, Michael, Osinubi, Modupe O.V., Recuenco, Sergio, Markotter, Wanda, Breiman, Robert F., Kalemba, Lems, Malekani, Jean, Lindblade, Kim A., Rostal, Melinda K., Ojeda-Flores, Rafael, Suzan, Gerardo, Davis, Lora B., Blau, Dianna M., Ogunkoya, Albert B., Alvarez Castillo, Danilo A., Moran, David, Ngam, Sali, Akaibe, Dudu, Agwanda, Bernard, Briese, Thomas, Epstein, Jonathan H., Daszak, Peter, Rupprecht, Charles E., Holmes, Edward C., and Lipkin, W. Ian (2013) Bats are a major natural reservoir for hepaciviruses and pegiviruses. Proceedings of the National Academy of Sciences of the United States of America, 110 (20). pp. 8194-8199.

Nikolay, Birgit, Dupressoir, Anne, Firth, Cadhla, Faye, Ousmane, Boye, Cheik S., Diallo, Mawlouth, and Sall, Amadou A. (2013) Comparative full length genome sequence analysis of usutu virus isolates from Africa. Virology Journal, 10. 217.

Rusaini, La Fauce, Kathy A., Elliman, Jennifer, Bowater, Rachel O., and Owens, Leigh (2013) Endogenous Brevidensovirus-like elements in Cherax quadricarinatus: friend or foe? Aquaculture, 396-399. pp. 136-145.

Wright, E.E., Elliman, J.R., and Owens, L. (2013) Induction and characterization of lysogenic bacteriophages from Streptococcus iniae. Journal of Applied Microbiology, 114 (6). pp. 1616-1624.

Rusaini, Ariel, Ellen, Burgess, Graham W., and Owens, Leigh (2013) Investigation of an idiopathic lesion in redclaw crayfish Cherax quadricarinatus using suppression subtractive hybridization. Journal of Virology & Microbiology, 2013. 569032. pp. 1-15.

Hayakijkosol, O., and Owens, L. (2013) Non-permissive C6/36 cell culture for the Australian isolate of Macrobrachium rosenbergii nodavirus. Journal of Fish Diseases, 36 (4). pp. 401-409.

La Fauce, Kathy, and Owens, Leigh (2013) Suppression of Penaeus merguiensis densovirus following oral delivery of live bacteria expressing dsRNA in the house cricket (Acheta domesticus) model. Journal of Invertebrate Pathology, 112 (2). pp. 162-165.

Tortosa, Pablo, Pascalis, Hervé, Guernier, Vanina, Cardinale, Eric, Le Corre, Matthieu, Goodman, Steven M., and Dellagi, Koussay (2012) Deciphering arboviral emergence within insular ecosystems. Infection, Genetics and Evolution, 12 (6). pp. 1333-1339.

Hayakijkosol, Orachun, and Owens, Leigh (2012) B2 or not B2: RNA interference reduces Macrobrachium rosenbergii nodavirus replication in redclaw crayfish (Cherax quadricarinatus). Aquaculture, 326-329. pp. 40-45.

Hoque, M.A., Skerratt, L.F., Garland, S., Burgess, G.W., and Selleck, P. (2012) Adaptations of a competitive enzyme-linked immunosorbent assays for the detection of antibodies to influenza A virus in horse sera for use in wild aquatic birds. Indian Journal of Virology, 23 (3). pp. 261-269.

Hoque, M.A., Burgess, G.W., Greenhill, A.R., Hedlefs, R., and Skerratt, L.F. (2012) Causes of morbidity and mortality of wild aquatic birds at Billabong Sanctuary, Townsville, North Queensland, Australia. Avian Diseases, 56 (1). pp. 249-256.

La Fauce, Kathy, and Owens, Leigh (2012) Dietary uptake of green fluorescent protein for delivery of dsRNA to induce RNA interference. Journal of Marine Science Research and Development, 2 (4). 1000114. pp. 1-5.

Rai, Praveen, Safeena, Muhammed P., Krabsetsve, Kjersti, La Fauce, Kathy, Owens, Leigh, and Karunasagar, Indrani (2012) Genomics, molecular epidemiology and diagnostics of infectious hypodermal and hematopoietic necrosis virus. Indian Journal of Virology, 23 (2). pp. 203-214.

La Fauce, K., Ariel, E., Munns, S., Rush, C., and Owens, L. (2012) Influence of temperature and exposure time on the infectivity of Bohle iridovirus, a ranavirus. Aquaculture, 354-355. pp. 64-67.

Hoque, M.A., Burgess, G.W., Karo-Karo, D., Cheam, A.L., and Skerratt, L.F. (2012) Monitoring of wild birds for Newcastle disease virus in north Queensland, Australia. Preventive Veterinary Medicine, 103 (1). pp. 49-62.

La Fauce, Kathy, and Owens, Leigh (2012) RNA interference with special reference to combating viruses of crustacea. Indian Journal of Virology, 23 (2). pp. 226-243.

Hayakijkosol, Orachun, Burgess, Graham, La Fauce, Kathy, and Owens, Leigh (2012) The complete sequence of the Australia recognizate of Macrobrachium rosenbergii nodavirus which causes white tail disease. Aquaculture, 366-367. pp. 98-104.

Aeby, G.S., Bourne, D.G., Wilson, B., and Work, T.M. (2011) Coral diversity and the severity of disease outbreaks: a cross-regional comparison of Acropora White Syndrome in a species-rich region (American Samoa) with a species-poor region (Northwestern Hawaiian Islands). Journal of Marine Biology, 2011. 490198.

Claydon, Kerry, Roper, Katrina G., and Owens, Leigh (2010) Attempts at producing a hybridised Penaeus mondon cell line by cellular fusion. Fish and Shellfish Immunology, 29 (3). pp. 539-543.

Hall-Mendelin, Sonja , Ritchie, Scott A., Johansen , Cheryl A., Zborowski , Paul, Cortis , Giles, Dandridge, Scott, Hall, Roy A., and van den Hurk, Andrew F. (2010) Exploiting mosquito sugar feeding to detect mosquito-borne pathogens. Proceedings of the National Academy of Sciences of the United States of America, 107 (25). pp. 11255-11259.

Ariel, Ellen, Holopainen, Riikka, Olesen, Niels Jørgen, and Tapiovaara, Hannele (2010) Comparative study of ranavirus isolates from cod (Gadus morhua) and turbot (Psetta maxima) with reference to other ranaviruses. Archives of Virology, 155 (8). pp. 1261-1271.

Raina, Jean-Baptiste, Dinsdale, Elizabeth A., Willis, Bette L., and Bourne, David G. (2010) Do the organic sulfur compounds DMSP and DMS drive coral microbial associations? Trends in Microbiology, 18 (3). pp. 101-108.

Quan, Phenix-Lan, Firth, Cadhla, Street, Craig, Henriquez, Jose A., Petrosov, Alexandra, Tashmukhamedova, Alla, Hutchison, Stephen K., Egholm, Michael, Osinubi, Modupe O.V., Niezgoda, Michael, Ogunkoya, Albert B., Briese, Thomas, Rupprecht, Charles E., and Lipkin, W. Ian (2010) Identification of a Severe Acute Respiratory Syndrome Coronavirus-Like Virus in a Leaf-Nosed Bat in Nigeria. mBio, 1 (4). e00208-e00210.

Owens, L., Liessmann, L., La Fauce, K., Nyguyen, T., and Zeng, C. (2010) Intranuclear bacilliform virus and hepatopancreatic parvovirus (PmergDNV) in the mud crab Scylla serrata (Forskal) of Australia. Aquaculture, 310 (1-2). pp. 47-51.

Pagán, Israel, Firth, Cadhla, and Holmes, Edward C. (2010) Phylogenetic Analysis Reveals Rapid Evolutionary Dynamics in the Plant RNA Virus Genus Tobamovirus. Journal of Molecular Evolution, 71. pp. 298-307.

Firth, Cadhla, Kitchen, Andrew, Shapiro, Beth, Suchard, Marc A., Holmes, Edward C., and Rambaut, Andrew (2010) Using Time-Structured Data to Estimate Evolutionary Rates of Double-Stranded DNA Viruses. Molecular Biology and Evolution, 27 (9). pp. 2038-2051.

Ritchie, Scott A. (2009) Dengue: Australia's other pandemic. Microbiology Australia, 30 (4). pp. 114-117.

Haynes, L., Arzey, E., Bell, C., Buchanan, N., Burgess, G., Cronan, V., Dickason, C., Field, H., Gibbs, S., Hansbro, P.M., Hollingsworth, T., Hurt, A.C., Kirkland, P., McCracken, H., O'Connor, J., Tracey, J., Wallner, J., Warner, S., Woods, R., and Bunn, C. (2009) Australian surveillance for avian influenza viruses in wild birds between July 2005 and June 2007. Australian Veterinary Journal, 87 (7). pp. 266-272.

Rapley, Luke P., Russell, Richard C., Montgomery, Brian L., and Ritchie, Scott A. (2009) The effects of sustained release metofluthrin on the biting, movement, and mortality of Aedes aegypti in a domestic setting. American Journal of Tropical Medicine and Hygiene, 81 (1). pp. 94-99.

Kearney, Michael, Porter, Warren P., Williams, Craig, Ritchie, Scott, and Hoffmann, Ary A. (2009) Integrating biophysical models and evolutionary theory to predict climatic impacts on species' ranges: the dengue mosquito Aedes aegypti in Australia. Functional Ecology, 23 (3). pp. 528-538.

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Firth, Cadhla, Charleston, Michael A., Duffy, Siobain, Shapiro, Beth, and Holmes, Edward C. (2009) Insights into the Evolutionary History of an Emerging Livestock Pathogen: Porcine Circovirus 2. Journal of Virology, 83 (24). pp. 12813-12821.

Rajamanonmani, Ravikumar, Nkenfou, Celine, Clancy, Paula, Yau, Yin Hoe, Shochat, Susana Geifman, Sukupolvi-Petty, Soila, Schul, Wouter, Diamond, Michael S., Vasudevan, Subhash G., and Lescar, Julien (2009) On a mouse monoclonal antibody that neutalizes all four dengue type serotypes. Journal of General Virology, 90. pp. 799-809.

Xu, Yaxiang, Tang, Lei, Zhang, Maoyou, and Yuan, Simin (2009) Physiology and attack-back research of white spot syndrome virus of Litopenaeus vannamei Boom reared in fresh-water. Journal of Suzhou University: natural science, 25 (1). pp. 81-83.

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Löndt, Brandon Z., Nunez, Alejandro, Banks, Jill, Nili, Hassan, Johnson, Linda K., and Alexander, Dennis J. (2008) Pathogenesis of highly pathogenic avian influenza A/turkey/Turkey/1/2005 H5N1 in Pekin ducks (Anas platyrhynchos) infected experimentally. Avian Pathology, 37 (6). pp. 619-627.

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Claydon, Kerry, Cullen, Bradford, and Owens, Leigh (2004) Methods to enhance the intensity of intranuclear bacilliform virus infection in Cherax quadricarinatus. Diseases of Aquatic Organisms, 60 (2). pp. 173-178.

Claydon, Kerry, Cullen, Bradford, and Owens, Leigh (2004) OIE white spot syndrome virus PCR gives false-positive results in Cherax quadricarinatus. Diseases of Aquatic Organisms, 62 (3). pp. 265-268.

Krabsetsve, Kjersti, Cullen, Bradford R., and Owens, Leigh (2004) Rediscovery of the Australian strain of infectious hypodermal and haematopoietic necrosis virus. Diseases of Aquatic Organisms, 61 (1-2). pp. 153-158.

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Book Chapter

Christi, Katrina, Elliman, Jennifer, and Owens, Leigh (2017) A synthesis of the divalent cation requirements for efficient adsorption of bacteriophage onto bacterial cells. In: Harrington, Daniel, (ed.) Bacteriophages: an overview and synthesis of a re-emerging field. Bacteriology Research Developments . Nova Science Publishers Inc, New York, NY, USA, pp. 43-69.

Owens, Leigh (2011) The viral ecology of aquatil crustaceans. In: Hurst, Christon J., (ed.) Studies in Viral Ecology; animal host systems. Wiley-Blackwell, Hoboken, NJ, USA, pp. 177-189.

Conference Item

Loiseau, Claire, Requena, Mary, Cazabat, Michelle, Carrere, Nicolas, Suc, Bertrand, Marchou, Bruno, Izopet, Jaques, and Delobel, Pierre (2015) T regulatory cells disrupt the CCL20-CCR6 axis driving Th17 homing to the gut. In: Abstracts from the 2015 Conference on Retroviruses and Opportunistic Infections. 274. p. 235. From: CROI 2015: Conference on Retroviruses and Opportunistic Infections, 23-26 February 2015, Seattle, WA, USA.

Elliman, Jennifer, and Owens, Leigh (2010) Isolation and examination of a bacteriophage of a pathogenic strain of Burkholderia pseudomallei. In: UNSPECIFIED. From: 6th World Melioidosis Congress, 1-3 December 2010, Townsville. (Unpublished)

Flegel, T.W., Pasharawipas, T., Owens, L., and Oakey, H.J. (2005) Evidence for Phage-induced virulence in the shrimp pathogen. In: Proceedings of the Fifth Symposium on Diseases in Asian Aquaculture (5) pp. 329-337. From: Diseases in Asian Aquaculture V, 24-28 November 2005, Gold Coast, QLD, Australia.

Oakey, Jane, Cullen, Bradford, and Owens, Leigh (2005) A hypothetical model for VHML phage conversion of Vibrio harveyi. In: Proceedings of the Fifth Symposium on Diseases in Asian Aquaculture. pp. 457-464. From: Diseases in Asian Aquaculture V, 24-28 November 2005, Gold Coast, QLD, Australia.

Thesis

Pascelli Sant'Ana Santos, Cecília (2019) Viruses in coral reef sponges. PhD thesis, James Cook University.

Sakuna, Kitikarn (2018) Novel RNA viruses causing muscle lesions in red claw crayfish (Cherax quadricarinatus). PhD thesis, James Cook University.

Buerger, Patrick (2017) Viruses: contributors to and mitigators of black band disease in corals. PhD thesis, James Cook University.

Bochow, Shaun (2016) Characterisation of Cherax quadricarinatus densovirus: the first virus characterised from Australian freshwater crayfish. PhD thesis, James Cook University.

Jaroenram, Wansadaj (2015) New insight into detection and evolution of Australian Penaeus stylirostris densovirus. PhD thesis, James Cook University.

Hayakijkosol, Orachun (2012) Macrobrachium rosenbergii nodavirus (MrNV) in juvenile crustacea. PhD thesis, James Cook University.

Munro, James Leslie (2006) The epidemiology of gill-associated virus in Penaeus monodon and the development of alternative detection methods. PhD thesis, James Cook University.

Liessmann, Laurence (2005) Investigation into the mortalities of larval mud crabs, Scylla serrata and methods of control. Masters (Research) thesis, James Cook University.