A

Ainsworth, Tracy D., and Gates, Ruth D. (2016) Corals' microbial sentinels: the coral microbiome will be key to future reef health. Science, 352 (6293). pp. 1518-1519.

Alamgir, Mohammed (2016) Ecosystem services across contrasting forested landscapes in Queensland's Wet Tropics Bioregion: contemporary patterns, processes and likely future trends under a changing climate. PhD thesis, James Cook University.

Alamgir, Mohammed, Mulkul, Sharif Ahmed, and Turton, Stephen M. (2015) Modelling spatial distribution of critically endangered Asian elephant and Hoolock gibbon in Bangladesh forest ecosystems under a changing climate. Applied Geography, 60. pp. 10-19.

Atkin, Owen K., Bloomfield, Keith J., Reich, Peter B., Tjoelke, Mark G., Asner, Gregory P., Bonal, Damien, Bönisch, Gehard, Bradford, Matt G., Cernusak, Lucas A., Cosio, Eric G., Creek, Danielle, Crous, Kristine Y., Domingues, Tomas F., Dukes, Jeffrey S., Egerton, John J.G., Evans, John R., Farquhar, Graham D., Fyllas, Nikolaos M., Gauthier, Paul P.G., Gloor, Emanuel, Gimeno, Teresa E., Griffin, Kevin L., Guerrieri, Rossella, Heskel , Mary A., Huntingford, Chris, Ishida, François Yoko, Kattage, Jens, Lambers, Hans, Liddell, Michael J., Lloyd, Jon, Lusk, Christopher H., Martin, Roberta E., Maskimov, Ayal P., Maximov, Trofim C., Malhi, Yadvinder, Medlyn, Belinda E., Meir, Patrick, Mercado, Lina, Mirotchnick, Nicholas, Ng, Desmond, Niinemets, Ulo, O'Sullivan, Odhran S., Phillips, Oliver L., Poorter, Lourens, Poot, Pieter, Prentice, I. Colin, Salinas, Norma, Rowland, Lucy M., Ryan, Michael G., Sitch, Stephen, Slot, Martijn, Smith, Nicholas G., Turnbull, Matthew H., VanderWel, Mark C., Valldares, Fernando, Veneklaas, Erik J., Weerasinghe, Lasantha K., Wirth, Christian, Wright, Ian J., Wythers, Kirk R., Xiang, Jen, Xiang, Shuang, and Zaragoza-Castells, Joana (2015) Global variability in leaf respiration in relation to climate, plant functional types and leaf traits. New Phytologist, 206 (2). pp. 614-636.

Allan, Bridie J.M., Domenici, Paolo, Munday, Philip L., and McCormick, Mark I. (2015) Feeling the heat: the effect of acute temperature changes on predator–prey interactions in coral reef fish. Conservation Physiology, 3 (1). cov011. pp. 1-8.

Almeida Magris, Rafael (2015) Advancing conservation planning for persistence: design of a conservation strategy for Brazilian coral reefs. PhD thesis, James Cook University.

Apgaua, Deborah M.G., Ishida, François Y., Tng, David Y.P., Laidlaw, Melinda J., Santos, Rubens M., Rumman, Rizwana, Eamus, Derek, Holtum, Joseph A.M., and Laurance, Susan G.W. (2015) Functional traits and water transport strategies in lowland tropical rainforest trees. PLoS ONE, 10 (6). e0130799. pp. 1-19.

Alamgir, Mohammed, Turton, Stephen M., and Pert, Petina L. (2014) Ecosystem services based adaptation to climate change: why and how? In: Abstracts from A Community on Ecosystem Services Conference. p. 5. From: ACES 2014: A Community on Ecosystem Services Conference, 8-12 December 2014, Washington, DC, USA.

Alamgir, Mohammed, Pert, Petina L., and Turton, Stephen M. (2014) A review of ecosystem services research in Australia reveals a gap in integrating climate change and impacts on ecosystem services. The International Journal of Biodiversity Science, Ecosystems Services & Management, 10 (2). pp. 112-127.

Allan, Bridie J.M., Miller, Gabrielle M., McCormick, Mark I., Domenici, Paolo, and Munday, Philip L. (2014) Parental effects improve escape performance of juvenile reef fish in a high-CO(2) world. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1777). 20132179. pp. 1-7.

Alamgir, Mohammed, and Turton, Stephen M. (2014) Climate change and organic carbon storage in Bangladesh forests. In: Tuteja, Narenda, and Gill, Sarvajeet S., (eds.) Climate Change and Plant Abiotic Stress Tolerance. Wiley-Blackwell, Weinheim, Germany, pp. 881-902.

Alamgir, Mohammed, Salas, Edison M., Turton, Stephen M., and Pert, Petina L. (2014) Ecosystem services: adaptation pathways and opportunities. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 1: introduction, biodiversity and ecosystem services. James Cook University, Cairns, QLD, Australia, pp. 75-101.

Albouy, Camille, Velez, Laure, Coll, Marta, Colloca, Francesco, Le Loc'h, François, Mouillot, David, and Gravel, Dominique (2014) From projected species distribution to food-web structure under climate change. Global Change Biology, 20 (3). pp. 730-741.

Aristophanous, Marios (2014) Understanding patterns of endemic dung beetle (Coleoptera: Scarabaeidae: Scarabaeinae) biodiversity in the Australian Wet Tropics rainforest: implications of climate change. PhD thesis, James Cook University.

Albright, Rebecca, and Mason, Benjamin (2013) Projected near-future levels of temperature and pCO2 reduce coral fertilization success. PLoS ONE, 8 (2). e56468. pp. 1-8.

Allan, Bridie J.M., Domenici, Paolo, McCormick, Mark I., Watson, Sue-Ann, and Munday, Philip L. (2013) Elevated CO2 affects predator-prey interactions through altered performance. PLoS One, 8 (3). e58520. pp. 1-7.

Adegboye, Oyelola A., and Kotze, Danelle (2012) Disease mapping of Leishmaniasis outbreak in Afghanistan: spatial hierarchical Bayesian analysis. Asian Pacific Journal of Tropical Disease, 2 (4). 253 - 259.

Ateweberhan, M., McClanahan, T.R., Graham, N.A.J., and Sheppard, C.R.C. (2011) Episodic heterogeneous decline and recovery of coral cover in the Indian Ocean. Coral Reefs, 30 (3). pp. 739-752.

Anderson, Alexander Sibthorpe (2011) Influences of past, present and future climate on the structure and diversity of rainforest bird assemblages in north-eastern Australia. PhD thesis, James Cook University.

Anthony, Kenneth R.N., Hoogenboom, Mia O., Maynard, Jeffrey A., Grottoli, Andréa G., and Middlebrook, Rachael (2009) Energetics approach to predicting mortality risk from environmental stress: a case study of coral bleaching. Functional Ecology, 23 (3). pp. 539-550.

B

Brown, Jaclyn N., Bambrick, Hilary, Barlow, Snow, Fallon, Dale, Fernandez-Piquer, Judith, Gallant, Ailie, Henrie, Gilly, Nidumolu, Uday, Northfield, Tobin, Poloczanska, Elvira, Roiko, Anne, Tong, Shilu, Vickers, Claudia, and Wheeler, Sarah Ann (2016) In 30 years how might climate change affect what Australians eat and drink? Bulletin of the Australian Meteorological and Oceanographic Society, 29 (1). pp. 22-27.

Biggs, Duan, Hicks, Christina C., Cinner, Joshua E., and Hall, C. Michael (2015) Marine tourism in the face of global change: the resilience of enterprises to crises in Thailand and Australia. Ocean & Coastal Management, 105. pp. 65-74.

Beasley, Robert Gregory (2015) New and emerging issues affecting climate change adaptation on the environment, economic development and settlement patterns of the Mitchell River catchment. Masters (Research) thesis, James Cook University.

Brien, H.V., Watson, S.-A., and Hoogenboom, M.O. (2015) Presence of competitors influences photosynthesis, but not growth, of the hard coral Porites cylindrica at elevated seawater CO2. ICES Journal of Marine Science, 73 (3). pp. 659-669.

Brooker, Rohan M., Munday, Philip L., Chivers, Douglas P., and Jones, Geoffrey P. (2015) You are what you eat: diet-induced chemical crypsis in a coral-feeding reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1799). 20141887.

Bridge, Thomas C.L., Ferrari, Renata, Bryson, Mitch, Hovey, Renae, Figueira, Will F., Williams, Stefan B., Pizarro, Oscar, Harborne, Alastair R., and Byrne, Maria (2014) Variable responses of benthic communities to anomalously warm sea temperatures on a high-latitude coral reef. PLoS ONE, 9 (11). e113079. pp. 1-20.

Barrett, Scott, Lenton, Timothy M., Millner, Antony, Tavoni, Alessandro, Carpenter, Stephen, Anderies, John M., Chapin, F. Stuart, Crépin, Anne-Sophie, Daily, Gretchen, Ehrlich, Paul, Folke, Carl, Galaz, Victor, Hughes, Terry, Kautsky, Nils, Lambin, Eric F., Naylor, Rosamond, Nyborg, Karine, Polasky, Stephen, Scheffer, Marten, Wilen, James, Xepapadeas, Anastasios, and de Zeeuw, Aart (2014) Climate engineering reconsidered. Nature Climate Change, 4. pp. 527-529.

Ban, Stephen S., Pressey, Robert L., and Graham, Nicholas A.J. (2014) Assessing interactions of multiple stressors when data are limited: a Bayesian belief network applied to coral reefs. Global Environmental Change, 27. pp. 64-72.

Brooker, Rohan Maurice Ralfe (2014) Determinants of resource specialisation and its ecological consequences for the corallivorous filefish, Oxymonacanthus longirostris. PhD thesis, James Cook University.

Bohnet, Iris C., Curnock, Matt, Bell, Robyn, Hill, Rosemary, and Lyons, Peci (2014) Evolving methodology for identifying climate adaptation pathways and options. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia, pp. 202-213.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2014) Habitat degradation modifies the strength of interspecific competition in coral dwelling damselfishes. Ecology, 95 (11). pp. 3056-3067.

Beeden, Roger John (2014) A dynamic understanding of coral reef health informs resilience-based management of the Great Barrier Reef. PhD thesis, James Cook University.

Bateman, Brooke L., Murphy, Helen T., Reside, April E., Mokany, Karel, and VanDerWal, Jeremy (2013) Appropriateness of full-, partial- and no-dispersal scenarios in climate change impact modelling. Diversity and Distributions, 19 (10). pp. 1224-1234.

Bell, Johann D., Ganachaud, Alexandre, Gehrke, Peter C., Griffiths, Shane P., Hobday, Alistair J., Hoegh-Guldberg, Ove, Johnson, Johanna E., Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Matear, Richard J., Pickering, Timothy D., Pratchett, Morgan S., Sen Gupta, Alex, Senina, Inna, and Waycott, Michelle (2013) Mixed responses of tropical Pacific fisheries and aquaculture to climate change. Nature Climate Change, 3 (6). pp. 591-599.

Bauman, Andrew G., Pratchett, Morgan S., Baird, Andrew H., Riegl, Bernhard, Heron, Scott F., and Feary, David A. (2013) Variation in the size structure of corals is related to environmental extremes in the Persian Gulf. Marine Environmental Research, 84. pp. 43-50.

Bower, Deborah S., Hodges, Kate M., and Georges, Arthur (2013) Salinity of incubation media influences embryonic development of a freshwater turtle. Journal of Comparative Physiology B: Biochemical Systemic and Environmental Physiology, 183 (2). pp. 235-241.

Berkstrom, Charlotte, Jones, Geoffrey P., McCormick, Mark I., and Srinivasan, Maya (2012) Ecological versatility and its importance for the distribution and abundance of coral reef wrasses. Marine Ecology Progress Series, 461. pp. 151-163.

Bateman, Brooke L., VanDerWal, Jeremy, and Johnson, Christopher N. (2012) Nice weather for bettongs: using weather events, not climate means, in species distribution models. Ecography, 35 (4). pp. 306-314.

Ban, Natalie C., Pressey, Robert L., and Weeks, Scarla (2012) Conservation objectives and sea-surface temperature anomalies in the Great Barrier Reef. Conservation Biology, 26 (5). pp. 799-809.

Bower, Deborah S., Death, Clare E., and Georges, Arthur (2012) Ecological and physiological impacts of salinisation on freshwater turtles of the lower Murray River. Wildlife Research, 39 (8). pp. 705-710.

Beger, Maria, Babcock, Russ, Booth, David J., Bucher, Daniel, Condie, Scott A., Creese, Bob, Cvitanovic, Christopher, Dalton , Steve J., Harrison, Peter, Hoey, Andrew, Jordan, Alan, Loder, Jennifer, Malcolm, Hamish, Purcell, Steven W., Roelfsma, Chris, Sachs, Patrick , Smith, Stephen D.A., Sommer, Brigitte, Stuart-Smith, Rick, Thomson, Damian, Wallace, Carden C., Zann, Maria, and Pandolfi, John M. (2011) Research challenges to improve the management and conservation of subtropical reefs to tackle climate change threats. Ecological Management and Restoration, 12 (1). e7-e10.

Bell, Johann D., Andrew, Neil L., Batty, Michael J., Chapman, Lindsay B., Dambacher, Jeffrey M., Dawson, Brian, Ganachaud, Alexandre S., Gehrke, Peter C., Hampton, John, Hobday, Alistair J., Hoegh-Guldberg, Ove, Johnson, Johanna E., Kinch, Jeff P., Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Timothy D., Pratchett, Morgan S., Vunisea, Aliti, and Waycott, Michelle (2011) Adapting tropical Pacific fisheries and aquaculture to climate change: management measures, policies and investments. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 803-876.

Bell, Johann D., Johnson, Johanna E., Ganachaud, Alex S., Gehrke, Peter C., Hobday, Alistair J., Hoegh-Guldberg, Ove, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Tim, Pratchett, Morgan S., and Waycott, Michelle (2011) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change: summary for Pacific Island Countries and Territories. Secretariat of the Pacific Community, New Caledonia, Noumea.

Boyero, Luz, Pearson, Richard G., Gessner, Mark O., Barmuta, Leon A., Ferreira, Verónica, Gracia, Manuel A.S., Dudgeon, David, Boulton, Andrew J., Callisto, Marcos, Chauvet, Eric, Helson, Julie E., Bruder, Andreas, Albariño, Ricardo J., Yule, Catherine M., Arunachalam, Muthukumarasamy, Davies, Judy N., Figueroa, Ricardo, Flecker, Alexander S., Ramirez, Alonso, Death, Russell, Iwata, Tomoya, Mathooko, Jude M., Mathuriau, Catherine, Goncalves, José F., Moretti, Marcelo, Jinggut, Tajang, Lamothe, Sylvian, M'Erimba, Charles, Ratnarajah, Lavenia, Schindler, Markus H., Castela, José, Buria, Leonardo, Cornejo, Aydeé, Villanueva, Verónica, and West, Derek C. (2011) A global experiment suggests climate warming will not accelerate litter decomposition in streams but might reduce carbon sequestration. Ecology Letters, 14 (3). pp. 289-294.

Bateman, Brooke Lee (2010) Beyond simple means: integrating extreme events and biotic interactions in species distribution models: conservation implications for the northern bettong (Bettongia tropica) under climate change. PhD thesis, James Cook University.

Bonin, Mary C., Munday, Philip L., McCormick, Mark I., Srinivasan, Maya, and Jones, Geoffrey P. (2009) Coral-dwelling fishes resistant to bleaching but not to mortality of host corals. Marine Ecology Progress Series, 394. pp. 215-222.

Baldwin, Ken, England, Matthew, Hoegh-Guldberg, Ove, Hughes, Terry, Karoly, David, Lough, Janice, Lynch, Amanda, McCulloch, Malcolm, Nicholls, Neville, Pitman, Andy, Possingham, Hugh, Quiggin, John, and Steffen, Will (2009) Emissions Reduction Targets and the Great Barrier Reef. Report. Federation of Australian Scientific and Technological Societies, Canberra.

Berkelmans, Ray (2001) Bleaching, upper thermal limits and temperature adaptation in reef corals. PhD thesis, James Cook University.

Baird, Andrew (1998) Mass bleaching of corals on the Great Barrier Reef. Coral Reefs, 17 (4). p. 376.

C

Chakravarti, Leela J. (2019) Manipulation of coral photosymbionts for enhancing resilience to environmental change. PhD thesis, James Cook University.

Cinner, Joshua E., Huchery, Cindy, Hicks, Christina C., Daw, Tim M., Marshall, Nadine, Wamukota, Andrew, and Allison, Edward H. (2015) Changes in adaptive capacity of Kenyan fishing communities. Nature Climate Change, 5 (9). pp. 872-876.

Chan, Neil Ching Siang (2015) Effect of ocean acidification on reef-building corals: understanding variability and projecting population-level impacts. PhD thesis, James Cook University.

Cooper, Jennifer K., Spencer, Matthew, and Bruno, John F. (2015) Stochastic dynamics of a warmer Great Barrier Reef. Ecology, 96 (7). pp. 1802-1811.

Chung, Wen-Sung, Marshall, N. Justin, Watson, Sue-Ann, Munday, Philip L., and Nilsson, Göran E. (2014) Ocean acidification slows retinal function in a damselfish through interference with GABAA receptors. Journal of Experimental Biology, 217. pp. 323-326.

Chen, Wei, Pike, David A., He, Dujuan, Wang, Ying, Ren, Lina, Wang, Xinyi, Fan, Xiaogang, and Lu, Xin (2014) Altitude decreases testis weight of a frog (Rana kukunoris) on the Tibetan plateau. Herpetological Journal, 24 (3). pp. 183-188.

Craig, Robin Kundis, and Hughes, Terry P. (2014) Marine protected areas, marine spatial planning and the resilience of marine ecosystems. In: Garmestani, Ahjond S., and Allen, Craig R., (eds.) Social-Ecological Resilience and Law. Columbia University Press, New York, NY, USA, pp. 98-141.

Carnaval, Ana Carolina, Waltari, Eric, Rodrigues, Miguel T., Rosauer, Dan, VanDerWal, Jeremy, Damasceno, Roberta, Prates, Ivan, Strangas, Maria, Spanos, Zoe, Rivera, Danielle, Pie, Marcio R., Firkowski, Carina R., Bornschein, Marcos R., Ribeiro, Luiz F., and Moritz, Craig (2014) Prediction of phylogeographic endemism in an environmentally complex biome. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1792). pp. 1-8.

Chivers, Douglas P., Ramasamy, Ryan A., McCormick, Mark I., Watson, Sue-Ann, Siebeck, Ulrike E., and Ferrari, Maud C.O. (2014) Temporal constraints on predation risk assessment in a changing world. Science of the Total Environment, 500-501. pp. 332-338.

Cole, A.J., Lawton, R.J., Pisapia, C., and Pratchett, M.S. (2014) The effects of coral bleaching on settlement preferences and growth of juvenile butterflyfishes. Marine Environmental Research, 98. pp. 106-110.

Capon, Samatha J., Chambers, Lynda E., Mac Nally, Ralph, Naiman, Robert J., Davies, Peter, Marshall, Nadine, Pittock, Jamie, Reid, Michael, Capon, Timothy, Douglas, Michael, Catford, Jane, Baldwin, Darren S., Stewardson, Michael, Roberts, Jane, Parsons, Meg, and Williams, Stephen E. (2013) Riparian ecosystems in the 21st century: hotspots for climate change adaptation? Ecosystems, 16 (3). pp. 359-381.

Chua, Chia-Miin, Leggat, William, Moya, Aurelie, and Baird, Andrew (2013) Temperature affects the early life history stages of corals more than near future ocean acidification. Marine Ecology Progress Series, 475. pp. 85-92.

Cvitanovic, C., Wilson, S.K., Fulton, C.J., Almany, G.R., Anderson, P., Babcock, R.C., Ban, N.C., Beeden, R.J., Beger, M., Cinner, J., Dobbs, K., Evans, L.S., Farham, A., Friedman, K.J., Gale, K., Gladstone, W., Grafton, Q., Graham, N.A.J., Gudge, S., Harrison , P.L., Holmes, T.H., Johnstone, N., Jones, G.P., Jordan, A., Kendrick, A.J., Klein, C.J., Little , L.R., Malcolm , H.A., Morris, D., Possingham, H.P., Prescott, J., Pressey, R.L., Skilleter, G.A., Simpson, C., Waples, K., Wilson, D., and Williamson, D.H. (2013) Critical research needs for managing coral reef marine protected areas: perspectives of academics and managers. Journal of Environmental Management, 114. pp. 84-91.

Chan, Neil C.S., and Connolly, Sean R. (2013) Sensitivity of coral calcification to ocean acidification: a meta-analysis. Global Change Biology, 19 (1). pp. 282-290.

Couturier, Christine S., Stecyk, Jonathan A.W., Rummer, Jodie L., Munday, Philip L., and Nilsson, Göran E. (2013) Species-specific effects of near-future CO₂ on the respiratory performance of two tropical prey fish and their predator. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 166 (3). pp. 482-489.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2012) Patterns of migration between feeding and spawning sites in a coral reef surgeonfish. Coral Reefs, 31 (1). pp. 77-87.

Cinner, J.E., McClanahan, T.R., Graham, N.A.J., Daw, T.M., Maina, J., Stead, S.M., Wamukota, A., Brown, K., and Bodin, Ö. (2012) Vulnerability of coastal communities to key impacts of climate change on coral reef fisheries. Global Environmental Change, 22 (1). pp. 12-20.

Chua, Chia-Miin, Schupp, Peter, Leggat, William, and Baird, Andrew (2012) Effects of ocean acidification on metamorphosis: brooding and spawning larvae. In: Proceedings of the 12th International Coral Reef Symposium. 8D_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Coker, D.J., Graham, N.A.J., and Pratchett, M.S. (2012) Interactive effects of live coral and structural complexity on the recruitment of reef fishes. Coral Reefs, 31 (4). pp. 919-927.

Coker, Darren J. (2012) The importance of live coral habitat for reef fishes and its role in key ecological processes. PhD thesis, James Cook University.

Cripps, Ingrid, Munday, Philip L., and McCormick, Mark I. (2011) Ocean acidification affects prey detection by a predatory reef fish. PLoS One, 6 (7). e22736. pp. 1-7.

Collier, Catherine J., Uthicke, Sven, and Waycott, Michelle (2011) Thermal tolerance of two seagrass species at contrasting light levels: Implications for future distribution in the Great Barrier Reef. Limnology and Oceanography, 56 (6). pp. 2200-2210.

Cumbo, Vivian Ruth (2011) The establishment and development of symbiosis in coral larvae. PhD thesis, James Cook University.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2009) Coral bleaching and habitat degradation increase susceptibility to predation for coral-dwelling fishes. Behavioral Ecology, 20 (6). pp. 1204-1210.

Cinner, Joshua E., McClanahan, Tim R., Graham, Nicholas A.J., Pratchett, Morgan S., Wilson, Shaun K., and Raina, Jean-Baptiste (2009) Gear-based fisheries management as a potential adaptive response to climate change and coral mortality. Journal of Applied Ecology, 46 (3). pp. 724-732.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Effects of coral bleaching on the feeding response of two species of coral-feeding fish. Journal of Experimental Marine Biology and Ecology, 373. pp. 11-15.

Coker, D.J., Pratchett, M.S., and Munday, P.L. (2009) Does body colouration influence predation risk of coral dwelling reef fish in bleached landscapes? In: Proceedings of the 11th Coral Reef Symposium. pp. 1281-1285. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Cocklin, Chris R., and Dibden, Jacqui (2009) Systems in peril: climate change, agriculture and biodiversity in Australia. In: IOP Conference Series: Earth and Environmental Science (8) pp. 1-21. From: Beyond Kyoto: addressing the challenges of climate change, 5–7 March 2009 , Aarhus, Denmark.

Chin, Andrew, Sweatman, Hugh, Forbes, Susan, Perks, Helen, Walker, Ryan, Jones, Geoff, Williamson, David, Evans, Richard, Hartley, Fraser, Armstrong, Shannon, Malcolm, Hamish, and Edgar, Graham (2008) 2008 Status of the coral reefs in Australia and Papua New Guinea. In: Wilkinson, Clive, (ed.) Status of Coral Reefs of the World: 2008. Global Coral Reef Monitoring Network, Townsville, QLD, Australia, pp. 159-176.

Chin, Andrew, and Kyne, Peter M. (2007) Vulnerability of chondrichthyan fishes of the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul. A, (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and Australian Greenhouse Office, Townsville, QLD, Australia, pp. 393-425.

Congdon, Bradley C., Erwin, Carol A., Peck, Darren R., Baker, G. Barry, Double, Michael C., and O'Neill, Paul (2007) Vulnerability of seabirds on the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia, pp. 427-464.

D

Duke, Norman (2020) Mangrove harbingers of coastal degradation seen in their responses to global climate change coupled with ever-increasing human pressures. Human Ecology Journal of the Commonwealth Human Ecology Council – Mangrove Special Issue, 30 (April 2020). pp. 19-23.

Davies, Kalu J.E. (2017) Carbon cycle processes in tropical savannas of far North Queensland, Australia. PhD thesis, James Cook University.

Duke, Norman (2017) Climate calamity along Australia's gulf coast. Landscape Architecture Australia, 153. pp. 66-71.

Dixson, Danielle L., Jennings, Ashley R., Atema, Jelle, and Munday, Philip L. (2015) Odor tracking in sharks is reduced under future ocean acidification conditions. Global Change Biology, 21 (4). pp. 1454-1462.

Domingues, Thomas Ferreira, Ishida, F. Yoko, Feldpausch, Ted R., Grace, John, Meir, Patrick, Saiz, Gustavo, Sene, Olivier, Schrodt, Franziska, Sonké, Bonaventure, Taedoumg, Herman, Veenendaal, Elmar M., Lewis, Simon, and Lloyd, Jon (2015) Biome-specific effects of nitrogen and phosphorus on the photosynthetic characteristics of trees at a forest-savanna boundary in Cameroon. Oecologia, 178 (3). pp. 659-672.

Dale, Allan, Vella, Karen J., and Cottrell, Alison (2015) Can social resilience inform SA/SIA for adaptive planning for climate change in vulnerable regions? Journal of Natural Resources Policy Research, 7 (1). pp. 93-104.

Donelson, Jennifer M., and Munday, Philip L. (2015) Transgenerational plasticity mitigates the impact of global warming to offspring sex ratios. Global Change Biology, 21 (8). pp. 2954-2962.

dei Marcovaldi, Maria A.G., Santos, Armando J.B., Santos, Alexsandro S., Soares, Luciano S., Lopez, Gustave G., Godfrey, Matthew H., López-Mendilaharsu, Milagros, and Fuentes, Mariana M.P.B. (2014) Spatio-temporal variation in the incubation duration and sex ratio of hawksbill hatchlings: implication for future management. Journal of Thermal Biology, 44. pp. 70-77.

Dale, Allan, Vella, Karen, Potts, Ruth, Voyce, Bronwyn, Stevenson, Bob, Cottrell, Alison, King, David, Babacan, Hurriyet, Boon, Helen, Gooch, Margaret, and Pert, Petina (2014) Applying Social Resilience Concepts and Indicators to Support Climate Adaptation in Tropical North Queensland, Australia: benchmark evidence base. Report. James Cook University, Cairns.

Donelson, Jennifer M., McCormick, Mark I., Booth, David J., and Munday, Philip L. (2014) Reproductive acclimation to increased water temperature in a tropical reef fish. PLoS ONE, 9 (5). e97223. pp. 1-9.

Domenici, Paolo, Allan, Bridie J.M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2014) Shifting from right to left: the combined effect of elevated CO2 and temperature on behavioural lateralization in a coral reef fish. PLoS One, 9 (1). e87969. pp. 1-6.

Dale, A.P., Vella, K., and McKee, J. (2014) Analysing governance of Australia's system of landscape-based greenhouse gas abatement. Australasian Journal of Environmental Management, 21 (4). pp. 378-395.

de Novaes e Silva, Verônica, Pressey, Robert L., Machado, Ricardo B., Vanderwal, Jeremy, Wiederhecker, Helga C., Werneck, Fernanda P., and Colli, Guarino R. (2014) Formulating conservation targets for a gap analysis of endemic lizards in a biodiversity hotspot. Biological Conservation, 180. pp. 1-10.

Daley, Ben (2014) The Great Barrier Reef: an environmental history. Earthscan Oceans . Routledge, Abingdon, Oxon, UK.

Duke, Norman (2014) Mangrove coast. In: Harff, Jan, Meschede, Martin, Petersen, Sven, and Thiede, Jörn, (eds.) Encyclopedia of Marine Geosciences. Encyclopedia of Earth Sciences Series . Springer, The Netherlands, pp. 412-422.

Duke, Norman, Nagelkerken, Ivan, Agardy, Tundi, Wells, Sue, and Van Lavieren, Hanneke (2014) The importance of mangroves to people: a call to action. Report. United Nations Environment Programme World Conservation Monitoring Centre (UNEP-WCMC), Cambridge, UK.

Doubleday, Zoë A., Clarke, Steven M., Li, Xiaoxu, Pecl, Gretta T., Ward, Tim M., Battaglene, Stephen, Frusher, Stewart, Gibbs, Philip J., Hobday, Alistair J., Hutchinson, Neil, Jennings, Sarah M., and Stoklosa, Richard (2013) Assessing the risk of climate change to aquaculture: a case study from south-east Australia. Aquaculture Environment Interactions , 3 (2). pp. 163-175.

Dubey, Sylvain, Pike, David A., and Shine, Richard (2013) Predicting the impacts of climate change on genetic diversity in an endangered lizard species. Climatic Change, 117 (1-2). pp. 319-327.

Dale, Allan, McKee, James, Vella, Karen, and Potts, Ruth (2013) Carbon, biodiversity and regional natural resource planning: towards high impact next generation plans. Australian Planner, 50 (4). pp. 328-339.

Dabruzzi, Theresa F., Bennett, Wayne A., Rummer, Jodie L., and Fangue, Nann A. (2013) Juvenile ribbontail stingray, Taeniura lymma (ForsskAyenl, 1775) (Chondrichthyes, Dasyatidae), demonstrate a unique suite of physiological adaptations to survive hyperthermic nursery conditions. Hydrobiologia, 701 (1). pp. 37-49.

Dell, Anthony I. (2013) A functional approach to understanding how temperature and habitat dimensionality drive universality and variation in ecological systems. PhD thesis, James Cook University.

Donelson, Jennifer, Munday, Philip, McCormick, Mark, and Pitcher, C.R. (2012) Rapid transgenerational acclimation of a tropical reef fish to climate change. Nature Climate Change, 2. pp. 30-32.

Domenici, Paolo, Allan, Bridie, McCormick, Mark I., and Munday, Philip L. (2012) Elevated carbon dioxide affects behavioural lateralization in a coral reef fish. Biology Letters, 8 (1). pp. 78-81.

Devine, Brynn M., Munday, Philip L., and Jones, Geoffrey P. (2012) Homing ability of adult cardinalfish is affected by elevated carbon dioxide. Oecologia, 168 (1). pp. 269-276.

Dawson, John L., Hua, Quan, and Smithers, Scott G. (2012) Benthic foraminifera: their importance to future reef island resilience. In: Proceedings of the 12th International Coral Reef Symposium. 1A_1. pp. 1-7. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Donelson, J.M., Munday, P.L., and McCormick, M.I. (2012) Climate change may affect fish through an interaction of parental and juvenile environments. Coral Reefs, 31 (3). pp. 753-762.

Devney, Carol Ann (2012) Climate variation and population dynamics in tropical seabirds. PhD thesis, James Cook University.

Dieleman, Wouter (2012) Global change effects on soil C and soil C cycling. PhD thesis, James Cook University.

Devine, B.M., Munday, P.L., and Jones, G.P. (2012) Rising CO2 concentrations affect settlement behaviour of larval damselfishes. Coral Reefs, 31 (1). pp. 229-238.

Donelson, Jennifer M., and Munday, Philip L. (2012) Thermal sensitivity does not determine acclimation capacity for a tropical reef fish. Journal of Animal Ecology, 81 (5). pp. 1126-1131.

Donelson, Jennifer M., Munday, Philip, Mccormick, Mark I., and Nilsson, Göran E. (2011) Acclimation to predicted ocean warming through developmental plasticity in a tropical reef fish. Global Change Biology, 17 (4). pp. 1712-1719.

Donelson, Jennifer Marie (2011) Climate change and the future for coral reef fishes: the potential for acclimation. PhD thesis, James Cook University.

Devine, Brynn Michelle (2011) The effects of ocean acidification on habitat associations of coral reef fishes. Masters (Research) thesis, James Cook University.

Devney, Carol A., Caley, M. Julian, and Congdon, Bradley C. (2010) Plasticity of noddy parents and offspring to sea-surface temperature anomalies. PLoS ONE, 5 (7). e11891. pp. 1-10.

Dixson, Danielle L., Munday, Philip L., and Jones, Geoffrey P. (2010) Ocean acidification disrupts the innate ability of fish to detect predator olfactory cues. Ecology Letters, 13 (1). pp. 68-75.

Donelson, J.M., Munday, P.L., McCormick, M.I., Pankhurst, N.W., and Pankhurst, P.M. (2010) Effects of elevated water temperature and food availability on the reproductive performance of a coral reef fish. Marine Ecology Progress Series, 401. pp. 233-243.

Diaz-Pulido, Guillermo, McCook, Laurence, Dove, Sophie, Berkelmans, Ray, Roff, George, Kline, David I., Weeks, Scarla, Evans, Richard D., Williamson, David H., and Hoegh-Guldberg, Ove (2009) Doom and boom on a resilient reef: climate change, algal overgrowth and coral recovery. PLoS ONE, 4 (4). - .

E

Epstein, Hannah Elizabeth (2018) Investigating the drivers of microbial community composition in reef-building corals. PhD thesis, James Cook University.

Ekstrom, Julia A., Suatoni, Lisa, Cooley, Sarah R., Pendleton, Linwood H., Waldbusser, George G., Cinner, Josh E., Ritter, Jessica, Langdon, Chris, van Hooidonk, Ruben, Gledhill, Dwight, Wellman, Katharine, Beck, Michael W., Brander, Luke M., Rittschof, Dan, Doherty, Carolyn, Edwards, Peter E.T., and Portela, Rosimeiry (2015) Vulnerability and adaptation of US shellfisheries to ocean acidification. Nature Climate Change, 5 (3). pp. 207-214.

Eriksen, M.S., Færevik, G., Kittilsen, S., McCormick, M.I., Damsgård, B., Braithwaite, V.A., Braastad, B.O., and Bakken, M. (2011) Stressed mothers - troubled offspring: a study of behavioural maternal effects in farmed Salmo salar. Journal of Fish Biology, 79 (3). pp. 575-586.

Edwards, F., Dixon, J., Friel, S., Hall, G., Hannigan, I., Hattersley, L., Hogan, A., Larsen, K., Lawrence, M., Lockie, S., Lopata, A., Wilson, R., and Wood, B. (2010) Food Systems, Climate Change Adaptation and Human Health in Australia. Report. National Climate Change Adaptation Research Facility.

F

Fox, Rebecca J., Donelson, Jennifer M., Schunter, Celia, Ravasi, Timothy, and Gaitan-Espitia, Juan D. (2019) Beyond buying time: the role of plasticity in phenotypic adaptation to rapid environmental change. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1768). 20180174.

Ferrari, Maud C.O., Munday, Philip L., Rummer, Jodie L., McCormick, Mark I., Corkill, Katherine, Watson, Sue-Ann, Allan, Bridie J.M., Meekan, Mark G., and Chivers, Douglas P. (2015) Interactive effects of ocean acidification and rising sea temperatures alter predation rate and predator selectivity in reef fish communities. Global Change Biology, 21. pp. 1848-1855.

Franklin, Donald C., Reside, April E., and Garnett, Stephen T. (2015) Management options for bird conservation in the face of climate change. In: Palutikof, Jean P., Boulter, Sarah L., Barnett, Jon, and Rissik, David, (eds.) Applied Studies in Climate Adaptation. Wiley-Blackwell, Chichester, UK, pp. 68-76.

Fancourt, Bronwyn A., Bateman, Brooke L., VanDerWal, Jeremy, Nicol, Stewart C., Hawkins, Clare E., Jones, Menna E., and Johnson, Christopher N. (2015) Testing the role of climate change in species decline: is the eastern quoll a victim of a change in the weather? PLoS One, 10 (6). e0129420. pp. 1-15.

Foo, Koong Hean (2014) Editor's invitational series: human behavior as the warming of earth accelerates: climate change and its effects in Singapore. Journal of Tropical Psychology, 4. e3. pp. 1-2.

Figueiredo, Joana, Baird, Andrew, Harii, Saki, and Connolly, Sean R. (2014) Increased local retention of reef coral larvae as a result of ocean warming. Nature Climate Change, 4 (6). pp. 498-502.

Feary, David A., Pratchett, Morgan S., Emslie, Michael J., Fowler , Ashley M., Figueira, Will F., Luiz, Osmar J., Nakamura, Yohei, and Booth, David J. (2014) Latitudinal shifts in coral reef fishes: why some species do and others don't shift. Fish and Fisheries, 15 (4). pp. 593-615.

Fuentes, Marianna M.P.B., Pike, David A., Dimatteo, Andrew, and Wallace, Bryan P. (2013) Resilience of marine turtle regional management units to climate change. Global Change Biology, 19 (5). pp. 1399-1406.

Franks, Peter J., Adams, Mark A., Amthor, Jeffrey S., Barbour, Margaret M., Berry, Joseph A., Ellsworth, David S., Farquhar, Graham D., Ghannoum, Oula, Lloyd, Jon, McDowell, Nate, Norby, Richard J., Tissue, David T., and von Caemmerer, Susanne (2013) Sensitivity of plants to changing atmospheric CO2 concentration: from the geological past to the next century. New Phytologist, 197 (4). pp. 1077-1094.

Fuentes, M.M.P.B., and Porter, W.P. (2013) Using a microclimate model to evaluate impacts of climate change on sea turtles. Ecological Modelling, 251. pp. 150-157.

Ferrari, Maud C.O., McCormick, Mark I., Munday, Philip L., Meekan, Mark G., Dixson, Danielle L., Lönnstedt, Oona, and Chivers, Douglas P. (2012) Effects of ocean acidification on visual risk assessment in coral reef fishes. Functional Ecology, 26 (3). pp. 553-558.

Ferrari, Maud C.O., Manassa, Rachel P., Dixson, Danielle L., Munday, Philip L., McCormick, Mark I., Meekan, Mark G., Sih, Andrew, and Chivers, Douglas P. (2012) Effects of ocean acidification on learning in coral reef fishes. PLoS ONE, 7 (2). e31478. pp. 1-10.

Fuentes, M.M.P.B., Fish, M.R., and Maynard, J.A. (2012) Management strategies to mitigate the impacts of climate change on sea turtle's terrestrial reproductive phase. Mitigation and Adaptation Strategies for Global Change, 17 (1). pp. 51-63.

Fuentes, Mariana M.P.B., Hamann, Mark, and Lukoschek, Vimoksalehi (2012) Marine reptiles. In: Poloczanska, E.S., Hobday, A.J., and Richardson, A.J., (eds.) A Marine Climate Change Impacts and Adaptation Report Card for Australia. CSIRO Marine and Atmospheric Research, Brisbane, QLD, Australia, pp. 379-400.

Feldpausch, T.R., Lloyd, J., Lewis, S.L., Brienen, R.J.W, Gloor, M., Monteagudo Mendoza, A., López-gonzález, G., Banin, L., Abu Salim, K., Affum-baffoe, K., Alexiades, M., Almeida, S., Amaral, I., Andrade, A., Aragão, L.E.O.C., Araujo Murakami, A., Arets, E.J.M.M., Arroyo, L., Aymard C, G.A., Baker, T.R., Banki, O.S., Berry, N.J., Cardozo, N., Chave, J., Comiskey, J.A., Alvarez, E., de Oliveira, A., Di Fiore, A., Djagbletey, G., Domingues, T.F., Erwin, T.L., Fearnside, P.M., França, M.B., Freitas, M.A., Higuchi, N., Honorio C, E., Iida, Y., Jiménez, E., Kassim, A.R., Killeen, T.J., Laurance, W.F., Lovett, J.C., Malhi, Y., Marimon, B.S., Marimon-Junior, B.H., Lenza, E., Marshall, A.R., Mendoza, C., Metcalfe, D.J., Mitchard, E.T.A., Neill, D.A., Nelson, B.W., Nilus, R., Nogueira, E.M., Parada, A., Peh, K.S.H., Pena Cruz, A., Peñuela, M.C., Pitman, N.C.A., Prieto, A., Quesada, C.A., Ramírez, F., Ramírez-Angulo, H., Reitsma, J.M., Rudas, A., Saiz, G., Salomão, R.P., Schwarz, M., Silva, N., Silva-Espejo, J.E., Silveira, M., Sonké, B., Stropp, J., Taedoumg, H.E., Tan, S., ter Steege, H., Terborgh, J., Torello-Raventos, M., Van Der Heijden, G.M.F., Vásquez, R., Vilanova, E., Vos, V.A., White, L., Willcock, S., Woell, H., and Phillips, O.L. (2012) Tree height integrated into pantropical forest biomass estimates. Biogeosciences, 9. pp. 3381-3403.

Ferrari, Maude C.O., McCormick, Mark I., Munday, Philip L., Meekan, Mark G., Dixson, Danielle L., Lonnstedt, Öona, and Chivers, Douglas P. (2011) Putting prey and predator into the CO2 equation – qualitative and quantitative effects of ocean acidification on predator–prey interactions. Ecology Letters, 14 (11). pp. 1143-1148.

Ferrari, Maud C.O., Dixson, Danielle L., Munday, Philip L., McCormick, Mark I., Meekan, Mark G., Sih, Andrew, and Chivers, Douglas P. (2011) Intrageneric variation in antipredator responses of coral reef fishes affected by ocean acidification: implications for climate change projections on marine communities. Global Change Biology, 17 (9). pp. 2980-2986.

Fuentes, M.M.P.B., Limpus, C.J., and Hamann, M. (2011) Vulnerability of sea turtle nesting grounds to climate change. Global Change Biology, 17 (1). pp. 140-153.

Fuentes, Mariana, and Hawkes, Lucy (2011) How will sea turtles cope with climate change? Report Section. State of the World's Sea Turtles, USA.

Fuentes, M.M.P.B, and Cinner, J.E. (2010) Using expert opinion to prioritize impacts of climate change on sea turtles’ nesting grounds. Journal of Environmental Management, 91 (12). pp. 2511-2518.

Fuentes, M.M.P.B., and Abbs, D. (2010) Effects of projected changes in tropical cyclone frequency on sea turtles. Marine Ecology Progress Series, 412. pp. 283-292.

Fuentes, M.M.P.B., Limpus, C.J., Hamann, M., and Dawson, J. (2010) Potential impacts of projected sea-level rise on sea turtle rookeries. Aquatic Conservation: marine and freshwater ecosystems , 20 (2). pp. 132-139.

Fuentes, M.M.P.B., Hamann, M., and Limpus, C.J. (2010) Past, current and future thermal profiles of green turtle nesting grounds: implications from climate change. Journal of Experimental Marine Biology and Ecology, 383 (1). pp. 56-64.

Figueiredo, Joana (2010) Tropical Coral Reefs (Appendix 10). In: Leadley, P., Pereira, H.M., Alkemade, R., Fernandez-Manjarrés, J.F., Proença, V., Scharlemann, J.P.W., and Walpole, M.J., (eds.) Biodiversity Scenarios: Projections of 21st century change in biodiversity and associated ecosystem services : a technical report for the global biodiversity outlook 3. CBD Technical Series (50). Secretariat of the Convention on Biological Diversity, Montreal, Canada, pp. 125-132.

Fuentes, Mariana Menezes Prata Bezerra (2010) Vulnerability of sea turtles to climate change: a case study within the northern Great Barrier Reef green turtle population. PhD thesis, James Cook University.

Feary, David A., McCormick, Mark I., and Jones, Geoffrey P. (2009) Growth of reef fishes in response to live coral cover. Journal of Experimental Marine Biology and Ecology, 373 (1). pp. 45-49.

Feary, David A., Almany, Glenn R., McCormick, Mark I., and Jones, Geoffrey P. (2007) Habitat choice, recruitment and the response of coral reef fishes to coral degradation. Oecologia, 153 (3). pp. 727-737.

Feary, David A., Almany, Glenn R., Jones, Geoffrey P., and McCormick, Mark I. (2007) Coral degradation and the structure of tropical reef fish communities. Marine Ecology Progress Series, 333. pp. 243-248.

G

Graba-Landry, Alexia (2020) The effect of increasing temperature on algae-fish interactions on coral reefs. PhD thesis, James Cook University.

Greenspan, Sasha Eden (2017) Thermal thresholds in the amphibian disease chytridiomycosis. PhD thesis, James Cook University.

Garnett, Stephen T. , Duursma, Daisy E., Ehmke, Glenn, Guay, Patrick-Jean, Stewart, Alistair, Szabo, Judit K., Weston, Michael A., Bennett, Simon, Crowley, Gabriel M., Drynan, David, Dutson, Guy, Fitzherbert, Kate, and Franklin, Donald C. (2015) Biological, ecological, conservation and legal information for all species and subspecies of Australian bird. Scientific Data, 2. 150061. pp. 1-6.

Gillies, Chris L., Fitzsimons, James A., Branigan, Simon, Hale, Lynne, Hancock, Boze, Creighton, Colin, Alleway, Heidi, Bishop, Melanie J., Brown, Simon, Chamberlain, Dean, Cleveland, Ben, Crawford, Christine, Crawford, Matthew, Diggles, Ben, Ford, John R., Hamer, Paul, Hart, Anthony, Johnston, Emma, McDonald, Tein, McLeod, Ian, Pinner, Breanna, Winstanley, Ross, and Russell, Kylie (2015) Scaling-up marine restoration efforts in Australia. Ecological Management and Restoration, 16 (2). pp. 84-85.

Gaylord, Brian, Kroeker, Kristy J., Sunday, Jennifer M., Anderson, Kathryn M., Barry, James P., Brown, Norah E., Connell, Sean D., Dupont, Sam, Fabricius, Katharina E., Hall-Spencer, Jason M., Klinger, Terrie, Milazzo, Marco, Munday, Philip L., Russell, Bayden D., Sanford, Eric, Schreiber, Sebastian J., Thiyagarajan, Vengatesen, Vaughan, Megan L.H., Widdicombe, Steven, and Harley, Christopher D.G. (2015) Ocean acidification through the lens of ecological theory. Ecology, 96 (1). pp. 3-15.

Gibb, H., Sanders, N.J., Dunn, Robert R., Watson, Simon, Photakis, Manoli, Abril, Silvia, Andersen, Alan N., Angulo, Elena, Armbrecht, Inge, Arnan, Xavier, Baccaro, Fabricio B., Bishop, Tom R., Boulay, Raphael, Castracani, Cristina, Del Toro, Israel, Delsinne, Thibaut, Diaz, Mireira, Donoso, David A., Enriquez, Martha L., Fayle, Tom M., Feener, Donald H., Fitzpatrick, Matthew C., Gómez, Crisanto, Grasso, Donato A., Groc, Sarah, Heterick, Brian, Hoffmann, Benjamin D., Lach, Lori, Lattke, John, Leponce, Maurice, Lessard, Jean-Philippe, Longino, John, Lucky, Andrea, Majer, Jonathan, Menke, Sean B., Mezger, Dirk, Mori, Alessandra, Munyai, Thinandavha C., Paknia, Omid, Pearce-Duvet, Jessica, Pfeiffer, Martin, Philpott, Stacy M., de Souza, Jorge L.P., Tista, Melanie, Vasconcelos, Heraldo L., Vonshak, Merav, and Parr, Catherine L. (2015) Climate mediates the effects of disturbance on ant assemblage structure. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1808). 20150418. pp. 1-8.

Graham, Catherine H., Carnaval, Ana C., Cadena, Carlos Daniel, Zamudio, Kelly, Roberts, Trina E., Para, Juan Luis, Mccain, Christy M., Bowie, Rauri C.K., Moritz, Craig, Baines, Stephen B., Schneider, Christopher J., VanDerWal, Jeremy, Rahbek, Carsten, Kozak, Kenneth H., and Sanders, Nathan J. (2014) The origin and maintenance of montane diversity: integrating evolutionary and ecological processes. Ecography, 37 (8). pp. 711-719.

Graham, Nicholas A.J. (2014) Habitat complexity: coral structural loss leads to fisheries declines. Current Biology, 24 (9). R359-R361.

Green, Alison L., Fernandes, Leanne, Almany, Glenn, Abesamis, Rene, McLeod, Elizabeth, Aliño, Porfirio M., White, Alan T., Salm, Rod, Tanzer, John, and Pressey, Robert L. (2014) Designing marine reserves for fisheries management, biodiversity conservation, and climate change adaptation. Coastal Management, 42 (2). pp. 143-159.

Gove, Jamison M., Williams, Gareth J., McManus, Margaret A., Heron, Scott F., Sandin, Stuart A., Vetter, Oliver J., and Foley, David G. (2013) Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems. PLoS ONE, 8 (4). e61974. pp. 1-14.

Granados-Cifuentes, Camila, Bellantuono, Anthony J., Ridgway, Tyrone, Hoegh-Guldberg, Ove, and Rodriguez-Lanetty, Mauricio (2013) High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity. BMC Genomics, 14. 228. pp. 1-12.

Grenchik, M.K., Donelson, J.M., and Munday, P.L. (2013) Evidence for developmental thermal acclimation in the damselfish, Pomacentrus moluccensis. Coral Reefs, 32 (1). pp. 85-90.

Gloor, M., Brienen, R.J.W., Galbraith, D., Feldpausch, T.R., Schöengart, J., Guyot, J.-L., Espinoza, J.C., Lloyd, J., and Phillips, O.L. (2013) Intensification of the Amazon hydrological cycle over the last two decades. Geophysical Research Letters, 40 (9). pp. 1729-1733.

Gedan, Keryn B., Kirwan, Matthew L., Wolanski, Eric, Barbier, Edward B., and Silliman, Brian R. (2011) The present and future role of coastal wetland vegetation in protecting shorelines: answering recent challenges to the paradigm. Climatic Change, 106 (1). pp. 7-29.

Gehrke, Peter C., Sheaves, Marcus J., Terry, James P., Boseto, David T., Ellison, Joanna C., Figa, Boga S., and Wani, Jacob (2011) Vulnerability of freshwater and estuarine fish habitats in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 369-432.

Gehrke, Peter C., Sheaves, Marcus J., Boseto, David T., Figa, Boga S., and Wani, Jacob (2011) Vulnerability of freshwater and estuarine fisheries in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 577-646.

Gibbon, Adam, Silman, Miles R., Malhi, Yadvinder, Fisher, Joshua B., Meir, Patrick, Zimmermann, Michael, Dargie, Greta C., Farfan, William R., and Garcia, Katrina C. (2010) Ecosystem carbon storage across the grassland-forest transition in the high Andes of Manu National Park, Peru. Ecosystems, 13 (7). pp. 1097-1111.

Gardiner, Naomi M., Munday, Philip L., and Nilsson, Göran E. (2010) Counter-gradient variation in respiratory performance of coral reef fishes at elevated temperatures. PLoS ONE, 5 (10). e13299. pp. 1-13.

Gagliano, Monica, McCormick, Mark I., Moore, James A., and Depczynski, Martial (2010) The basics of acidification: baseline variability of pH on Australian coral reefs. Marine Biology, 157 (8). pp. 1849-1856.

Granek, Elise F., Polasky, Stephen, Kappel, Carrie V., Reed, Denise J., Stoms, David M., Koch, Evamaria W., Kennedy, Chris J., Cramer, Lori A., Hacker, Sally D., Barbier, Edward B., Aswani, Shankar, Ruckelshaus, Mary, Perillo, Gerardo M.E., Silliman, Brian R., Muthiga, Nyawira, Bael, David, and Wolanski, Eric (2010) Ecosystem services as a common language for coastal ecosystem-based management. Conservation Biology, 24 (1). pp. 207-216.

Graham, N.A.J., Wilson, S.K., Pratchett, M.S., Polunin, N.V.C., and Spalding, M.D. (2009) Coral mortality versus structural collapse as drivers of corallivorous butterflyfish decline. Biodiversity and Conservation, 18 (12). pp. 3325-3336.

Graham, Nicholas A.J., McClanahan, Timothy R., MacNeil, M. Aaron, Wilson, Shaun K., Polunin, Nicholas V.C., Jennings, Simon, Chabanet, Pascale, Clark, Susan, Spalding, Mark D., Letourneur, Yves, Bigot, Lionel, Galzin, René, Öhman, Marcus C., Garpe, Kajsa C., Edwards, Alasdair J., and Sheppard, Charles R.C. (2008) Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems. PLoS ONE, 3 (8). e3039. - .

Gilman, Eric L., Ellison, Joanna, Duke, Norman C., and Field, Colin (2008) Threats to mangroves from climate change and adaptation options: a review. Aquatic Botany, 89 (2). pp. 237-250.

Graham, Nicholas A.J. (2007) Ecological versatility and the decline of coral feeding fishes following climate driven coral mortality. Marine Biology, 153 (2). pp. 119-127.

Graham, Nicholas A.J., McClanahan, Timothy R., Letourneur, Yves, and Galzin, Rene (2007) Anthropogenic stressors, inter-specific competition and ENSO effects on a Mauritian coral reef. Environmental Biology of Fishes, 78 (1). pp. 57-69.

Graham, Nicholas A.J., Wilson, Shaun K., Jennings, Simon, Polunin, Nicholas V.C., Robinson, Jan, Bijoux, Jude P., and Daw, Tim M. (2007) Lag effects in the impacts of mass coral bleaching on coral reef fish, fisheries, and ecosystems. Conservation Biology, 21 (5). pp. 1291-1300.

Graham, Nicholas A.J., Wilson, Shaun K., Jennings, Simon, Polunin, Nicholas V.C., Bijoux, Jude P., and Robinson, Jan (2006) Dynamic fragility of oceanic coral reef ecosystems. National Academy of Sciences. Proceedings, 103 (22). pp. 8425-8429.

Guinotte, John Michael (2006) Understanding environmental controls and predicting climate change effects on the health and occurrence of coral communities and their constituent organisms. PhD thesis, James Cook University.

Gardiner, Naomi M., and Jones, Geoffrey P. (2005) Habitat specialisation and overlap in a guild of coral reef cardinalfishes (Apogonidae). Marine Ecology Progress Series, 305. pp. 163-175.

Goldberg, Jeremy, and Wilkinson, Clive (2004) Global threats to coral reefs: coral bleaching, global climate change, disease, predator plagues and invasive species. Status of Coral Reefs of the World, 2004. pp. 67-92.

H

Hoegh-Guldberg, Ove, Skirving, William J., Lough, Janice M., Liu, Chunying, Mann, Michael E., Donner, Simon, Eakin, C. Mark, Cantin, Neal, Carilli, Jessica, Heron, Scott Fraser, Miller, Sonya, and Dove, Sophie (2019) Commentary: reconstructing four centuries of temperature-induced coral bleaching on the great barrier reef. Frontiers in Marine Science, 6. 86.

Hoey, Andrew S., and Bonaldo, Roberta M. (2018) Biology of Parrotfishes. CRC Press, Boca Raton, FL, USA.

Harris, Todd, Hope, Pandora, Oliver, Eric, Smalley, Robert, Arblaster, Julie, Holbrook, Neil, Duke, Norman, Pearce, Karen, Braganza, Karl, and Bindoff, Nathaniel (2017) Climate drivers of the 2015 Gulf of Carpentaria mangrove dieback. Report. Bureau of Meteorology, Canberra, ACT, Australia.

Heron, Scott F., Eakin, C. Mark, Douvere, Fanny, Anderson, Kristen, Day, Jon C., Geiger, Erick, Hoegh-Guldberg, Ove, van Hooidonk, Ruben, Hughes, Terry, Marshall, Paul, and Obura, David (2017) Impacts of climate change on World Heritage coral reefs: a first global scientific assessment. Report. UNESCO World Heritage Centre, Paris.

Haig, Jordahna Ellan-Ann (2015) Investigating long-term, high-resolution records of climate and extreme events in the southeast Indian and southwest Pacific oceans using the δ¹⁸O of stalagmites. PhD thesis, James Cook University.

Harman, Ben P., Taylor, Bruce M., and Lane, Marcus (2014) Urban partnerships and climate adaptation: challenges and opportunities. Current Opinion in Environmental Sustainability, 12. pp. 74-79.

Hill, Rosemary, and Lyons, Pethie (2014) Adaptation pathways and opportunities for Indigenous peoples. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia, pp. 144-167.

Holbrook, Neil J., and Johnson, Johanna E. (2014) Climate change impacts and adaptation of commercial marine fisheries in Australia: a review of the science. Climatic Change, 124 (4). pp. 703-715.

Hilbert, David W., Hill, Rosemary, Moran, Catherine, Turton, Stephen M., Bohnet, Iris C., Marshall, Nadine A., Pert, Petina L., Stoeckl, Natalie, Murphy, Helen T., Reside, April E., Laurance, Susan G.W., Alamgir, Mohammed, Coles, Rob, Crowley, Gabriel, Curnock, Matt, Dale, Allan, Duke, Norman C., Esparon, Michelle, Farr, Marina, Gillet, Sarah, Gooch, Margaret, Fuentes, Mariana, Hamann, Mark, James, Cassandra S., Kroon, Frederieke J., Larson, Silva, Lyons, Pethie, Marsh, Helene, Meyer Steiger, Dagmar, Sheaves, Marcus, and Westcott, David (2014) Climate change issues and impacts in the Wet Tropics NRM cluster region. Report. James Cook University, Cairns, QLD, Australia.

Heupel, M.R., and Simpfendorfer, C.A. (2014) Importance of environmental and biological drivers in the presence and space use of a reef-associated shark. Marine Ecology Progress Series, 496. pp. 47-57.

Heinrich, Dennis D.U., Rummer, Jodie L., Morash, Andrea J., Watson, Sue-Ann, Simpfendorfer, Colin, Heupel, Michelle R., and Munday, Philip L. (2014) A product of its environment: the epaulette shark (Hemiscyllium ocellatum) exhibits physiological tolerance to elevated environmental CO(2). Conservation Physiology, 2. pp. 1-12.

Hilmi, Nathalie, Allemand, Denis, Dupont, Sam, Safa, Alain, Haraldsson, Gunnar, Nunes, Paulo A.L.D., Moore, Chris, Hattam, Caroline, Reynaud, Stéphanie, Hall-Spencer, Jason M., Fine, Maoz, Turley, Carol, Jeffree, Ross, Orr, James, Munday, Philip L., and Cooley, Sarah R. (2013) Towards improved socio-economic assessments of ocean acidification's impacts. Marine Biology, 160 (8). pp. 1773-1787.

Huntingford, Chris, Zelazowski, Przemyslaw, Galbraith, David, Mercado, Lina M., Sitch, Stephen, Fisher, Rosie, Lomas, Mark, Walker, Anthony P., Jones, Chris D., Booth, Ben B.B., Malhi, Yadvinder, Hemming, Debbie, Kay, Gillian, Good, Peter, Lewis, Simon L., Phillips, Oliver L., Atkin, Owen K., Lloyd, Jon, Gloor, Emanuel, Zaragoza-Castells, Joana, Meir, Patrick, Betts, Richard, Harris, Phil P., Nobre, Carlos, Marengo, Jose, and Cox, Peter M. (2013) Simulated resilience of tropical rainforests to CO2-induced climate change. Nature Geoscience, 6 (4). pp. 268-273.

Hamann, Mark, Fuentes, Mariana M.P.B., Ban, Natalie C., and Mocellin, Véronique J.L. (2013) Climate change and marine turtles. In: Wyneken, Jeanette, Lohmann, Kenneth J., and Musick, John A., (eds.) The biology of sea turtles. CRC Press, Boca Raton, FL, USA, pp. 353-378.

Hoogenboom, Mia O., Campbell, Douglas A., Beraud, Eric, DeZeeuw, Katrina, and Ferrier-Pages, Christine (2012) Effects of light, food availability and temperature stress on the function of Photosystem II and Photosystem I of coral symbionts. PLoS ONE, 7 (1). e30167. pp. 1-14.

Howard, William R., Nash, Merinda, Anthony, Kenneth, Schmutter, Katherine, Bostock, Helen, Bromhead, Donald, Byrne, Maria, Currie, Kim, Diaz-Pulido, Guillermo, Eggins, Stephen, Ellwood, Michael, Eyre, Bradley, Haese, Ralf, Hallegraeff, Gustaaf, Hill, Katy, Hurd, Catriona, Law, Cliff, Lenton, Andrew, Matear, Richard, McNeil, Ben, McCulloch, Malcolm, Muller, Marius N., Munday, Philip, Opdyke, Bradley, Pandolfi, John M., Richards, Russell, Roberts, Donna, Russell, Bayden D., Smith, Abigail M., Tilbrook, Bronte, Waite, Anya, and Williamson, Jane (2012) Ocean acidification. In: Poloczanska, E.S., Hobday, A.J., and Richardson, A.J., (eds.) A Marine Climate Change Impacts and Adaptation Report Card for Australia. CSIRO Marine and Atmospheric Research, Brisbane, QLD, pp. 113-150.

Hughes, Terry (2011) Askö in Stanford 2000: commentary by Terry Hughes. In: Söderqvist, Tore, Sundbaum, Anna, Folke, Carl, and Mäler, Karl-Göran, (eds.) Bringing Ecologists and Economists Together: the Askö meetings and papers. Springer, Dordrecht, The Netherlands, pp. 163-164.

Heimann, Kirsten, Capper, Angela, and Sparrow, Leanne (2011) Ocean surface warming: impact on toxic benthic dinoflagellates causing ciguatera. In: UNSPECIFIED, (ed.) eLS. Wiley-Blackwell, pp. 1-8.

Haung, Wen-San, and Pike, David A. (2011) Climate change impacts on fitness depend on nesting habitat in lizards. Functional Ecology, 25 (5). pp. 1125-1136.

Hobbs, J-P. A., Jones, G.P., and Munday, P.L. (2011) Extinction risk in endemic marine fishes. Conservation Biology, 25 (5). pp. 1053-1055.

Holmes, Thomas H., and McCormick, Mark I. (2011) Response across a gradient: behavioural reactions of newly settled fish to predation cues. Animal Behaviour, 81 (3). pp. 543-550.

Hoeke, Ron K., Jokiel, Paul L., Buddemeier, Robert W., and Brainard, Russell E. (2011) Projected changes to growth and mortality of Hawaiian corals over the next 100 years. PLoS ONE, 6 (3). e18038. pp. 1-13.

Hoegh-Guldberg, Ove, Andréfouët, Serge, Fabricius, Katharina E., Diaz-Pulido, Guillermo, Lough, Janice M., Marshall, Paul A., and Pratchett, Morgan S. (2011) Vulnerability of coral reefs in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 251-296.

Hughes, Terry P., Graham, Nicholas A.J., Jackson, Jeremy B.C., Mumby, Peter J., and Steneck, Robert S. (2010) Rising to the challenge of sustaining coral reef resilience. Trends in Ecology & Evolution, 25 (11). pp. 633-642.

Holtum, Joseph A.M., and Winter, Klaus (2010) Elevated [CO2] and forest vegetation: more a water issue than a carbon issue? Functional Plant Biology, 37 (8). pp. 694-702.

Hobbs, Jean-Paul A,, Jones, G.P., and Munday, P.L. (2010) Rarity and extinction risk in coral reef angelfishes on isolated islands: interrelationships among abundance, geographic range size and specialisation. Coral Reefs, 29 (1). pp. 1-11.

Hughes, Terry (2009) World at a tipping point. Australian R&D Review. p. 9.

Hanson, N.N., Wurster, C.M., Bird, M.I., and Boyd, I.L. (2009) Intrinsic and extrinsic forcing in life histories: patterns of growth and stable isotopes in male Antarctic fur seal teeth. Marine Ecology Progress Series, 388. pp. 263-272.

Howard, W., de Salas, M, Cheal, A., Lough, J., McKinnon, D., Meekan, M., Sweatman, H., Coleman, M., Chambers, L., Dunlop, N., Church, J., Dowdney, J., Feng, M., Griffiths, S., Hemer, M., Hobday, A., Mapstone, B., Matear, R., Poloczanska, E., Richardson, A., Ridgway, K., Risbey, J., Thompson, P., Thresher, R., Weller, E., Saintilan, N., Wilson, S., Lenanton, R., Hosja, W., Moore, P., Wernberg, T., Marshall, P., Connolly, R., McDonald, J., Hill, K., Congdon, B, Devney, C., Fuentes, M., Graham, N., Hamann, M., Hughes, T., Kingsford, M., Munday, P., Pratchett, M., Sheaves, M., Goodwin, I., Raftos, D., Williamson, J., Beardall, J., Brett, S., Waschka, M., Dann, P., Ward, T., Edgar, G., Swadling, K., Connell, S., Russell, B., Lukoschek, V., Havenhand, J., McGregor, S., Jenkins, G., Campbell, A., Steinberg, P., Anthony, K., Lovelock, C., Skilleter, G., Figueira, W., Davidson, J., Hallegraeff, G., Holbrook, N., Booth, D., Doblin, M., Kendrick, G., Smale, D., Parker, L., and Ross, P. (2009) Marine Climate Change in Australia: impacts and adaptation responses: 2009 report card. Report. National Climate Change Adaptation Research Facility (NCCARF).

Hamann, Mark, Limpus, Colin J, and Read, Mark A (2007) Vulnerability of marine reptiles to climate change in the Great Barrier Reef. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and Australian Greenhouse Office, Townsville, QLD, Australia, pp. 465-497.

Hunt, Marina J. (1994) Effects of enhanced climate change and sea level rise on shallow-water reef corals: an experimantal analysis of coral demographic and photophysiological responses to depth changes. PhD thesis, James Cook University of North Queensland.

I

Inkster-Draper, Tamara E. (2017) Biogeography of bats in the Australian Wet Tropics: current distribution and response to future climate change. PhD thesis, James Cook University.

Isaac, Joanne, and Turton, Steve (2014) Essay 5 Expansion of the tropics - evidence and implications. Report Section. James Cook University, James Cook University, Cairns, Australia.

J

Johnson, Johanna (2018) Development and implementation of a vulnerability assessment tool to inform decision-making in socio-ecological systems. PhD thesis, James Cook University.

Jarrold, Michael D. (2018) Effects of diel CO₂ cycles on the early development and behaviour of coral reef fishes under ocean acidification. PhD thesis, James Cook University.

Jourdan, J., and Fuentes, M.M.P.B. (2015) Effectiveness of strategies at reducing sand temperature to mitigate potential impacts from changes in environmental temperature on sea turtle reproductive output. Mitigation and Adaptation Strategies for Global Change, 20 (1). pp. 121-133.

Johansen, J.L., Pratchett, M.S., Messmer, V., Coker, D.J., Tobin, A.J., and Hoey, A.S. (2015) Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean. Scientific Reports, 5. 13830. pp. 1-8.

Johansen, Jacob L., Steffensen, John F., and Jones, Geoffrey P. (2015) Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes. Conservation Physiology, 3 (1). cov039. pp. 1-12.

Johansen, J.L., Messmer, V., Coker, D.J., Hoey, A.S., and Pratchett, M.S. (2014) Increasing ocean temperatures reduce activity patterns of a large commercially important coral reef fish. Global Change Biology, 20 (4). pp. 1067-1074.

Johnson, Johanna, and Holbrook, Neil (2014) Adaptation of Australia's marine ecosystems to climate change: using science to inform conservation management. International Journal of Ecology, 2014. 140354.

Jeans, Jennifer, Campbell, Douglas A., and Hoogenboom, Mia O. (2013) Increased reliance upon photosystem II repair following acclimation to high-light by coral-dinoflagellate symbioses. Photosynthesis Research, 118 (3). pp. 219-229.

Johnson, Johanna, Maynard, Jeffrey, Devlin, Michelle, Wilkinson, Scott, Anthony, Ken, Yorkston, Hugh, Heron, Scott, Puotinen, Marji, and Van Hooidonk, Ruben (2013) 2013 scientific consensus statement: resilience of Great Barrier Reef marine ecosystems and drivers of change. Report. CSIRO Publishing, Queensland, Australia.

Johansen, Jacob L. (2012) Energetics of habitat use in planktivorous coral reef fishes: does specialization confer sensitivity to changing environmental conditions? PhD thesis, James Cook University.

Johansen, J.L., and Jones, G.P. (2011) Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17 (9). pp. 2971-2979.

Jacups, Susan Patricia (2011) Using statistical methods to evaluate and improve mosquito control for mosquito-borne disease reduction in the Northern Territory of Australia. PhD thesis, Charles Darwin University.

K

Karthikeyan, Obulisamy Parthiba, Joseph, Kurian, and Esakku, S. (2012) Methane emission potential of open dumps in Chennai: a case study. International Journal of Environmental Technology and Management, 15 (3/4/5/6). pp. 291-304.

Koehn, John D., Hobday, Alistair J., Pratchett, Morgan S., and Gillanders, Bronwyn M. (2011) Climate change and Australian marine and freshwater environments, fishes and fisheries: synthesis and options for adaptation. Marine and Freshwater Research, 62 (9). pp. 1148-1164.

Keith, Sally, Herbert, Roger J.H., Norton, Paul A., Hawkins, Stephen J., and Newton, Adrian C. (2011) Individualistic species limitations of climate-induced range expansions generated by meso-scale dispersal barriers. Diversity and Distributions, 17 (2). pp. 275-286.

Koch, Evamaria W., Barbier, Edward B., Silliman, Brian R., Reed, Denise J., Perillo, Gerardo M.E., Hacker, Sally D., Granek, Elise F., Primavera, Jurgenne H., Muthiga, Nyawira, Polasky, Stephen, Halpern, Benjamin S., Kennedy, Christopher J., Kappel, Carrie V., and Wolanski, Eric (2009) Non-linearity in ecosystem services: temporal and spatial variability in coastal protection. Frontiers in Ecology and the Environment, 7 (1). pp. 29-37.

Kearney, Michael, Porter, Warren P., Williams, Craig, Ritchie, Scott, and Hoffmann, Ary A. (2009) Integrating biophysical models and evolutionary theory to predict climatic impacts on species' ranges: the dengue mosquito Aedes aegypti in Australia. Functional Ecology, 23 (3). pp. 528-538.

L

Laubenstein, Taryn Diane (2019) Relationships between behavioral and physiological performance under elevated CO₂ in marine fishes. PhD thesis, James Cook University.

Lutz, Adrian, Raina, Jean-Baptiste, Motti, Cherie A., Miller, David J., and van Oppen, Madeleine J.H. (2015) Host coenzyme Q redox state is an early biomarker of thermal stress in the coral Acropora millepora. PLoS ONE, 10 (10). e0139290. pp. 1-18.

Lloyd, J., Domingues, T.F., Schrodt, F., Ishida, F.Y., Feldpausch, T.R., Saiz, G., Quesada, C.A., Schwarz, M., Torello-Raventos, M., Gilpin, M., Marimon, B.S., Marimon-Junior, B.H., Ratter, J.A., Grace, J., Nardoto, G.B., Veenendaal, E., Arroyo, L., Villarroel, D., Killeen, T.J., Steininger, M., and Phillips, O.L. (2015) Edaphic, structural and physiological contrasts across Amazon Basin forest-savanna ecotones suggest a role for potassium as a key modulator of tropical woody vegetation structure and function. Biogeosciences, 12 (22). pp. 6529-6571.

Lefevre, Sjannie, Watson, Sue-Ann, Munday, Philip L., and Nilsson, Göran E. (2015) Will jumping snails prevail? Influence of near-future CO2, temperature and hypoxia on respiratory performance in the tropical conch Gibberulus gibberulus gibbosus. Journal of Experimental Biology, 218 (19). pp. 2991-3001.

Little, Jeremy Keenan (2015) A song of fire and water: will climate change interacting with fire affect the distribution of vegetation in the Australian Wet Tropics? PhD thesis, James Cook University.

Llopiz, Joel K., Cowen, Robert K., Hauff, Martha J., Ji, Rubao, Munday, Philip L., Muhling, Barbara A., Peck, Myron A., Richardson, David E., Sogard, Susan, and Sponaugle, Su (2014) Early life history and fisheries oceanography: new questions in a changing world. Oceanography, 27 (4). pp. 26-41.

Langston, James, and Turton, Steve M. (2014) Industry-adaptation pathways and opportunities in the Wet Tropics cluster. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia, pp. 128-143.

Lindenmayer, David, Burns, Emma, Thurgate, Nicole, Lowe, Andrew, Dickman, Chris, Dormontt, Eleanor, Ens, Emilie, Foulkes, Jeff, Hoffmann, Ary, Keith, David, Liddell, Michael, Metcalfe, Daniel, Russell-Smith, Jeremy, Sparrow, Ben, Wardle, Glenda, White, Andrew, Williams, Richard, and Wood, Sam (2014) Synopsis. In: Lindenmayer, David, Burns, Emma, Thurgate, Nicole, and Lowe, Andrew, (eds.) Biodiversity and Environmental Change: monitoring, challenges and direction. CSIRO Publishing, Collingwood, VIC, Australia, pp. 573-595.

Lewis, Simon L., Sonké, Bonaventure, Sunderland, Terry, Begne, Serge K., López-González, Gabriela, Van Der Heijden, Geertje M.F., Phillips, Oliver L., Affum-Baffoe, Kofi, Baker, Timothy R., Banin, Lindsay, Bastin, Jean-François, Beeckman, Hans, Boeckx, Pascal, Bogaert, Jan, De Cannière, Charles, Chezeaux, Eric, Clark, Connie, Collins, Murray, Djagbletey, Gloria, Djuikouo, Marie Noël K., Droissart, Vincent, Doucet, Jean-Louis, Ewango, Cornielle E.N., Faucet, Sophie, Feldpausch, Ted R., Foli, Ernest G., Gillet, Jean-François, Hamilton, Alan C., Harris, David J., Hart, Terese B., de Haulleville, Thales, Hladik, Annette, Hufkens, Koen, Huygens, Dries, Jeanmart, Philippe, Jeffery, Kathryn J., Kearsley, Elizabeth, Leal, Miguel E., Lloyd, Jon, Lovett, Jon C., Makana, Jean-Remy, Malhi, Yadvinder, Marshall, Andrew R., Ojo, Lucas, Peh, Kelvin S-H., Pickavance, Georgia, Poulsen, John R., Reitsma, Jan M., Sheil, Douglas, Simo, Murielle, Steppe, Kathy, Taedoumg, Hermann E., Talbot, Joey, Taplin, James R.D., Taylor, David, Thomas, Sean C., Toirambe, Benjamin, Verbeeck, Hans, Vleminckx, Jason, White, Lee J.T., Willcock, Simon, Woell, Hannsjorg, and Zemagho, Lise (2013) Above-ground biomass and structure of 260 African tropical forests. Philosophical Transactions of the Royal Society B: Biological Sciences, 368 (1625). 20120295. pp. 1-14.

Lee, Michael Siu Fung (2013) Growth and nitrogen fixation of inland and coastal tropical Acacia species. Masters (Research) thesis, James Cook University.

Lönnstedt, Oona Margareta (2013) Predator-prey interactions and the importance of sensory cues in a changing world. PhD thesis, James Cook university.

Lönnstedt, Oona M., McCormick, Mark I., and Chivers, Douglas P. (2012) Well-informed foraging: damage-released chemical cues of injured prey signal quality and size to predators. Oecologia, 168 (3). pp. 651-658.

Linares, C., Pratchett, M.S., and Coker, D.J. (2011) Recolonisation of Acropora hyacinthus following climate-induced coral bleaching on the Great Barrier Reef. Marine Ecology Progress Series, 438. pp. 97-104.

Lönnstedt, O.M., and McCormick, M.I. (2011) Growth history and intrinsic factors influence risk assessment at a critical life transition for a fish. Coral Reefs, 30 (3). pp. 805-812.

Lönnstedt, Oona M., and McCormick, Mark I. (2011) Chemical alarm cues inform prey of predation threat: the importance of ontogeny and concentration in a coral reef fish. Animal Behaviour, 82 (2). pp. 213-218.

Luter, Heidi M. (2011) The effects of disease and stress on the microbial community of the sponge Ianthella basta. PhD thesis, James Cook University.

Laurance, Susan G.W., Laurance, William F., Nascimento, Henrique E.M., Andrade, Ana, Fearnside, Phillip M., Rebello, Expedito R.G., and Condit, Richard (2009) Long-term variation in Amazon forest dynamics. Journal of Vegetation Science, 20 (2). pp. 323-333.

Li, Jin, Hilbert, David W., Parker, Trevor, and Williams, Stephen (2009) How do species respond to climate change along an elevation gradient? A case study of the grey-headed robin (Heteromyias albispecularis). Global Change Biology, 15. pp. 255-267.

Ledlie, M., Graham, N. A. J., Bythell, J. C., Wilson, S. K., Jennings, S., Polunin, N. V. C., and Hardcastle, J. (2007) Phase shifts and the role of herbivory in the resilience of coral reefs. Coral Reefs, 26 (3). pp. 641-653.

M

Mohamed, Ibrahim (2018) Adaptive capacity of islands of the Maldives to climate change. PhD thesis, James Cook University.

McWilliam, Mike (2018) The functional diversity and redundancy of corals. PhD thesis, James Cook University.

Merino-Viteri, Andrés Ricardo (2018) The vulnerability of microhylid frogs, Cophixalus spp., to climate change in the Australian Wet Tropics. PhD thesis, James Cook University.

Martín Muñoz de Cote, Gerardo Antonio (2017) Modelling transmission of Hendra virus from flying foxes to horses. PhD thesis, James Cook University.

Munday, Philip L. (2017) New perspectives in ocean acidification research: editor's introduction to the special feature on ocean acidification. Biology Letters, 13 (9). 20170438.

Maguigad, Virgilio, King, David, and Cottrell, Alison (2015) Political ecology approach to island tourism planning and climate change adaptation: a methodological exploration. Urban Island Studies, 1. pp. 133-151.

Maguigad, Virgilio, King, David, and Cottrell, Alison (2015) Political ecology, island tourism planning, and climate change adaptation on Boracay Island. Urban Island Studies, 1. pp. 152-179.

Martin, Tara G., Murphy, Helen, Liedloff, Adam, Thomas, Colette, Chadès, Iadine, Cook, Garry, Fensham, Rod, McIvor, John, and van Klinken, Rieks D. (2015) Buffel grass and climate change: a framework for projecting invasive species distributions when data are scarce. Biological Invasions, 17 (11). pp. 3197-3210.

Mohandass, Dharmalingam, Zhao, Jian-Li, Xia, Yong-Mei, Campbell, Mason J., and Li, Qing-Jun (2015) Increasing temperature causes flowering onset time changes of alpine ginger Roscoea in the Central Himalayas. Journal of Asia-Pacific Biodiversity, 8 (3). pp. 191-198.

Maynard, Jeffrey, van Hooidonk, Ruben, Eakin, C. Mark, Puotinen, Marjetta, Garren, Melissa, Williams, Gareth, Heron, Scott F., Lamb, Joleah, Weil, Ernesto, Willis, Bette, and Harvell, C. Drew (2015) Projections of climate conditions that increase coral disease susceptibility and pathogen abundance and virulence. Nature Climate Change, 5 (7). pp. 688-695.

Munday, Philip L. (2015) Evolutionary ecology: survival of the fittest. Nature Climate Change, 5. pp. 102-103.

McDuie, Fiona, Weeks, Scarla J., Miller, Mark G.R., and Congdon, Bradley C. (2015) Breeding tropical shearwaters use distant foraging sites when self-provisioning. Marine Ornithology, 43. pp. 123-129.

Munday, Philip L. (2015) Climate change ecology: salmon behaving badly. Nature Climate Change, 5 (10). pp. 915-916.

Millar, Joanne Elaine, Boon, Helen, and King, David (2015) Do wildfire experiences influence views on climate change? International Journal of Climate Change Strategies and Management, 7 (2). pp. 124-139.

McLeod, I.M., McCormick, M.I., Munday, P.L., Clark, T.D., Wenger, A.S., Brooker, R.M., Takahashi, M., and Jones, G.P. (2015) Latitudinal variation in larval development of coral reef fishes: implications of a warming ocean. Marine Ecology Progress Series, 521. pp. 129-141.

McClanahan, Tim, Allison, Edward H., and Cinner, Joshua E. (2015) Managing fisheries for human and food security. Fish and Fisheries, 16 (1). pp. 78-103.

Mora, Camilo, Caldwell, Iain R., Caldwell, Jamie M., Fisher, Micah R., Genco, Brandon M., and Running, Steven W. (2015) Suitable days for plant growth disappear under projected climate change: potential human and biotic vulnerability. PLoS Biology, 13 (6). e1002167.

Munday, Philip L. (2014) Transgenerational acclimation of fishes to climate change and ocean acidification. F1000 Prime Reports, 6. 99. pp. 1-7.

Munday, Philip L., Cheal, Alistair J., Dixson, Danielle L., Rummer, Jodie L., and Fabricius, Katharina E. (2014) Behavioural impairment in reef fishes caused by ocean acidification at CO2 seeps. Nature Climate Change, 4. pp. 487-492.

Moran, Catherine, Turton, Stephen M., and Hill, Rosemary (2014) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 1: introduction, biodiversity and ecosystem services. James Cook University, Cairns, QLD, Australia.

Moran, Catherine, Turton, Stephen M., and Hill, Rosemary (2014) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia.

Moran, Catherine, and Turton, Stephen M. (2014) Adaptation pathways and opportunities for infrastructure. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia, pp. 108-127.

McClanahan, Tim R., Ateweberhan, Mebrahtu, Darling, Emily S., Graham, Nicholas A.J., and Muthiga, Nyawira (2014) Biogeography and change among regional coral communities across the Western Indian Ocean. PLoS ONE, 9 (4). e93385. pp. 1-9.

McClanahan, Timothy R., Graham, Nicholas A.J., and Darling, Emily S. (2014) Coral reefs in a crystal ball: predicting the future from the vulnerability of corals and reef fishes to multiple stressors. Current Opinion in Environmental Sustainability, 7. pp. 59-64.

Munday, Philip L., Watson, Sue-Ann, Chung, Wen-Sung, Marshall, N. Justin, and Nilsson, Göran (2014) Response to 'The importance of accurate CO2 dosing and measurement in ocean acidification studies'. Journal of Experimental Biology, 217. pp. 1828-1829.

Moran, Catherine, Hill, Rosemary, Turton, Stephen M., Hilbert, David W., Bohnet, Iris C., Reside, April, Bell, Robyn, Rainbird, John, Kay, Gavin, and Standley, Peta-Marie (2014) Science-planning partnership to improve landscape management. In: Abstracts from the 51st Annual Meeting of the Association for Tropical Biology and Conservation. From: ATBC 2014: 51st Annual Meeting of the Association for Tropical Biology and Conservation, 20-24 July 2014, Cairns, QLD, Australia.

Marshall, Nadine A. (2014) Social adaptation: minimising impacts through enhancing adaptive capacity. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 2: infrastructure, industry, indigenous peoples, social adaptation, emerging planning frameworks, evolving methodologies and climate adaptation planning in practice. James Cook University, Cairns, QLD, Australia, pp. 168-178.

Munday, Philip L., Warner, Robert R., Monro, Keyne, Pandolfi, John M., and Marshall, Dustin J. (2013) Predicting evolutionary responses to climate change in the sea. Ecology Letters, 16 (12). pp. 1488-1500.

Munday, Philip L., Pratchett, Morgan S., Dixson, Danielle L., Donelson, Jennifer M., Endo, Geoff G.K., Reynolds, Adam D., and Knuckey, Richard (2013) Elevated CO2 affects the behavior of an ecologically and economically important coral reef fish. Marine Biology, 160 (8). pp. 2137-2144.

Maguigad, Virgilio M. (2013) Political ecology in planning for island tourism in global climate change: exploring methodologies in the Philippines. In: Joint AESOP / ACSP Congress Dublin 2013. pp. 1-14. From: Joint AESOP and ACSP Congress 2013: planning for resilient cities and regions, 15-19 July, 2013, Dublin, Ireland. (Unpublished)

Marshall, Nadine A., Tobin, Renae C., Marshall, Paul A., Gooch, Margaret, and Hobday, Alistair J. (2013) Social vulnerability of marine resource users to extreme weather events. Ecosystems, 16 (5). pp. 797-809.

Madin, J.S., Dell, A.I., Madin, E.M.P., and Nash, M.C. (2013) Spatial variation in mechanical properties of coral reef substrate and implications for coral colony integrity. Coral Reefs, 32 (1). pp. 173-179.

McCormack, Catherine, Chartrand, Katie, and Rasheed, Michael (2012) Impacts of a large-scale flood event on sub-tropical intertidal seagrass meadows. In: Coast to Coast 2012: living on the edge: program and abstract book. p. 73. From: Coast to Coast 2012: Living on the Edge, 17-21 September 2012, Brisbane, QLD, Australia.

Mcleod, Elizabeth, Green, Alison, Game, Edward, Anthony, Kenneth, Cinner, Joshua, Heron, Scott F., Kleypas, Joanie, Lovelock, Catherine E., Pandolfi, John M., Pressey, Robert L., Salm, Rodney, Schill, Steve, and Woodroffe, Colin (2012) Integrating climate and ocean change vulnerability into conservation planning. Coastal Management, 40 (6). pp. 651-672.

Madin, Joshua S., Hoogenboom, Mia O., and Connolly, Sean R. (2012) Integrating physiological and biomechanical drivers of population growth over environmental gradients on coral reefs. The Journal of Experimental Biology, 215 (6). pp. 968-976.

McKenzie, Len, Collier, Catherine, Waycott, Michelle, Unsworth, Richard, Yoshida, Rudi, and Smith, Naomi (2012) Monitoring inshore seagrasses of the GBR and responses to water quality. In: Proceedings of the 12th International Coral Reef Symposium. 15B_4. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Munday, Philip L., Cheal, Alistair J., Graham, Nicholas A.J., Meekan, Mark, Pratchett, Morgan S., Sheaves, Marcus, Sweatman, Hugh, and Wilson, Shaun K. (2012) Tropical coastal fish. In: Ploczanska, E.S., Hobday, A.J., and Richardson, A.J., (eds.) A Marine Climate Change Impacts and Adaptation Report Card for Australia. CSIRO Marine and Atmospheric Research, Brisbane, QLD, Australia, pp. 281-306.

Moya, A., Ganot, P., Furla, P., and Sabourault, C. (2012) The transcriptomic response to thermal stress is immediate, transient and potentiated by ultraviolet radiation in the sea anemone Anemonia viridis. Molecular Ecology, 21 (5). pp. 1158-1174.

McClanahan, Tim R., and Cinner, Joshua E. (2011) Adapting to a changing environment: confronting the consequences of climate change. Oxford University Press, New York, NY, USA.

Marshall, N.A., Gordon, I.J., and Ash, A.J. (2011) The reluctance of resource-users to adopt seasonal climate forecasts to enhance resilience to climate variability on the rangelands. Climatic Change, 107 (3). pp. 511-529.

Munday, Philip L., Gagliano, Monica, Donelson, Jennifer M., Dixson, Danielle L., and Thorrold, Simon (2011) Ocean acidification does not affect the early life history development of a tropical marine fish. Marine Ecology Progress Series, 423. pp. 211-221.

Munday, P.L., Hernaman, V., Dixson, D.L., and Thorrold, S.R. (2011) Effect of ocean acidification on otolith development in larvae of a tropical marine fish. Biogeosciences, 8 (6). pp. 1631-1641.

MacNeil, M. Aaron, Graham, Nicholas A.J., Cinner, Joshua E., Dulvy, Nicholas K., Loring, Philip A., Jennings, Simon, Polunin, Nicholas V., Fisk, Aaron T., and McClanahan, Tim R. (2010) Transitional states in marine fisheries: adapting to predicted global change. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1558). pp. 3753-3763.

Marshall, N.A., Marshall, P.A., Tamelander, J., Obura, D., Malleret-King, D., and Cinner, J.E. (2010) A Framework for Social Adaptation to Climate Change: Sustaining Tropical Coastal Communities and Industries. Report. International Union for Conservation of Nature and Natural Resources, Gland, Switzerland.

MacNeil, M. Aaron, and Graham, Nicholas A.J. (2010) Enabling regional management in a changing climate through Bayesian meta-analysis of a large-scale disturbance. Global Ecology and Biogeography , 19 (3). pp. 412-421.

Munday, Philip L., Donelson, Jennifer M., Dixson, Danielle L. , and Endo, Geoff G.K. (2009) Effects of ocean acidification on the early life history of a tropical marine fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3275-3283.

Munday, Philip L., Crawley, Natalie, and Nilsson, Göran E. (2009) Interacting effects of elevated temperature and ocean acidification on the aerobic performance of coral reef fishes. Marine Ecology Progress Series, 388. pp. 235-242.

Munday, P.L., Leis, J.M., Lough, J.M., Paris, C.B., Kingsford, M.J., Berumen, M.L., and Lambrechts, J. (2009) Climate change and coral reef connectivity. Coral Reefs, 28 (2). pp. 379-395.

McClanahan, T.R., Cinner, J.E., Graham, N.A.J., Daw, T.M., Maina, J., Stead, S.M., Wamukota, A., Brown, K., Venus, V., and Polunin, N.V.C. (2009) Identifying reefs of hope and hopeful actions: contextualizing environmental, ecological, and social parameters to respond effectively to climate change. Conservation Biology, 23 (3). pp. 662-671.

Munday, Philip L., Dixson, Danielle L., Donelson, Jennifer M., Jones, Geoffrey P., Pratchett, Morgan S., Devitsina, Galina V., and Døving, Kjell B. (2009) Ocean acidification impairs olfactory discrimination and homing ability of a marine fish. Proceedings of the National Academy of Sciences of the United States of America, 106 (6). pp. 1848-1852.

Morecroft, Michael, and Keith, Sally (2009) Plant ecology as an indicator of climate and global change. In: Letcher, Trevor M., (ed.) Climate Change: observed impacts on planet Earth. Elsevier, Amsterdam, The Netherlands, pp. 297-305.

Munday, Philip L., Cheal, Alistair J., Graham, Nicholas A.J., Meekan, Mark, Pratchett, Morgan S., Sheaves, Marcus, Sweatman, Hugh, and Wilson, Shaun K. (2009) Tropical coastal fish. Report Section. National Climate Change Adaptation Research Plans.

Munday, Philip L., Jones, Geoffrey P., Pratchett, Morgan S., and Williams, Ashley J. (2008) Climate change and the future for coral reef fishes. Fish and Fisheries, 9 (3). pp. 261-285.

McClanahan, T.R., Cinner, J.E., Maina, J., Graham, N.A.J., Daw, T.M., Stead, S.M., Wamukota, A., Brown, K., Ateweberhan, M., Venus, V., and Polunin, N.V.C. (2008) Conservation action in a changing climate. Conservation Letters, 1 (2). pp. 53-59.

Munday, P. L., Kingsford, M.J., O'Callaghan, M., and Donelson, J.M. (2008) Elevated temperature restricts growth potential of the coral reef fish Acanthochromis polyacanthus. Coral Reefs, 27 (4). pp. 927-931.

Moore, Kenneth A., and Jarvis, Jessie C. (2008) Environmental factors affecting recent summertime eelgrass diebacks in the lower Chesapeake Bay: implications for long-term persistence. Journal of Coastal Research, Special Issue 55. pp. 135-147.

McClanahan, T.R., Ateweberhan, M., Sebastian, C. Ruiz, Graham, N. A. J., Wilson, S., Bruggemann, J., and Guillaume, M. (2007) Predictability of coral bleaching from synoptic satellite and in situ temperature observations. Coral Reefs, 26 (3). pp. 695-701.

McClanahan , T.R., Ateweberhan, M., Graham, N. A. J., Wilson, S.K., Sebastian, C. Ruiz, Guillaume, M.M.M., and Bruggemann, J.H. (2007) Western Indian Ocean coral communities: bleaching responses and susceptibility to extinction. Marine Ecology Progress Series, 337. pp. 1-13.

Munday, Philip L., Jones, Geoffrey P., Sheaves, Marcus, Williams, Ashley, and Goby, Gillian (2007) Vulnerability of fishes of the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and Australian Greenhouse Office, Townsville, QLD, Australia, pp. 357-391.

Meynecke, Jan-Olaf, Lee, Shing Yip, Duke, Norman, and Warnken, Jan (2006) Effect of rainfall as a component of climate change on estuarine fish production in Queensland, Australia. Estuarine, Coastal and Shelf Science , 69 (3-4). pp. 491-504.

N

Nay, Tiffany (2019) Temperature preferences of tropical fishes and the influence of local abiotic and biotic factors. PhD thesis, James Cook University.

Nowrouzi, Somayeh (2017) The macroecology of rainforest ants of the Australian Wet Tropics under climate change. PhD thesis, James Cook University.

Nay, Tiffany J., Johansen, Jacob L., Habary, Adam, Steffensen, John F., and Rummer, Jodie L. (2015) Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus). Coral Reefs, 34 (4). pp. 1261-1265.

Nash, Kirsty L. (2014) Assessment of scale dependent function in reef fish, and application to the evaluation of coral reef resilience. PhD thesis, James Cook University.

Newlands, Maxine (2013) What haunts the Captain of the Rainbow Warrior? The Ecologist. p. 1.

Nguyen, Hai-Hoa , McAlpine, Clive, Pullar, David, Johansen, Kasper, and Duke, Norman C. (2013) The relationship of spatial-temporal changes in fringe mangrove extent and adjacent land-use: case study of Kien Giang coast, Vietnam. Ocean & Coastal Management, 76. pp. 12-22.

Noonan, Sam H.C., Jones, Geoffrey P., and Pratchett, Morgan S. (2012) Coral size, health and structural complexity: effects on the ecology of a coral reef damselfish. Marine Ecology Progress Series, 456. pp. 127-137.

Nakamura, Koh, Denda, Tetsuo, Kokubugata, Goro, Forster, Paul I., Wilson, Gary, Peng, Ching-I, and Yokota, Masatsugu (2012) Molecular phylogeography reveals an antitropical distribution and local diversification of Solenogyne (Asteraceae) in the Ryukyu Archipelago of Japan and Australia. Biological Journal of the Linnean Society, 105 (1). pp. 197-217.

Negri, Andrew P., and Hoogenboom, Mia O. (2011) Water contamination reduces the tolerance of coral larvae to thermal stress. PLoS ONE, 6 (5). pp. 19703-19712.

Nilsson, Göran E., Östlund-Nilsson, Sara, and Munday, Philip L. (2010) Effects of elevated temperature on coral reef fishes: loss of hypoxia tolerance and inability to acclimate. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 156 (4). pp. 389-393.

Nilsson, Göran E., Crawley, Natalie, Lunde, Ida G., and Munday, Philip L. (2009) Elevated temperature reduces the respiratory scope of coral reef fishes. Global Change Biology, 15 (6). pp. 1405-1412.

Nystrom, M., Graham, N.A.J., Lorkrantz, J., and Norstrom, A.V. (2008) Capturing the cornerstones of coral reef resilience: linking theory to practice. Coral Reefs, 27 (4). pp. 795-809.

Nott, Jonathan (2005) The origin and evolution of Australia's eastern highlands. In: Bermingham, Eldredge, Dick, Christopher W., and Moritz, Craig, (eds.) Tropical Rainforests: Past, Present and Future. University of Chicago Press, Chicago, USA, pp. 322-335.

O

Ow, Y.X., Collier, C.J., and Uthicke, S. (2015) Responses of three tropical seagrass species to CO2 enrichment. Marine Biology, 162 (5). pp. 1005-1017.

Ogawa, Daisie R. (2014) The effects of climate change on the Acropora aspera holobiont. PhD thesis, James Cook University.

Oza, Anuja U., Lovett, Katharine E., Williams, Stephen E., and Moritz, Craig (2012) Recent speciation and limited phylogeographic structure in Mixophyes frogs from the Australian Wet Tropics. Molecular Phylogenetics and Evolution, 62 (1). pp. 407-413.

P

Perry, Justin James (2016) Fire management and biodiversity in Northern Australia. PhD thesis, James Cook University.

Pert, Petina L., Alamgir, Mohammed, Hill, Rosemary, Moran, Catherine, and Turton, M. (2015) Climate change impacts and adaptation pathways on key regional ecosystem services in the Wet Tropics NRM Cluster Region, Australia. In: Abstracts from the 8th International Ecosystem Services Partnership Conference. p. 196. From: 8th International Ecosystem Services Partnership (ESP) World Conference, 2015, 9-13 November 2015, Stellenbosch, South Africa.

Pacifici, Michela, Foden, Wendy B., Visconti, Piero, Watson, James E.M., Butchart, Stuart H.M., Kovacs, Kit M., Scheffers, Brett R., Hole, David.G., Martin, Tara G., Akçakaya, H. Resit, Corlett, Richard T., Huntley, Brian, Bickford, David, Carr, Jamie A., Hoffman, Ary A., Midgley, Guy F., Pearce-Kelly, Paul, Pearson, Richard G., Williams, Stephen E., Willis, Stephen G., Young, Bruce, and Rondinini, Carlo (2015) Assessing species vulnerability to climate change. Nature Climate Change, 5. pp. 215-225.

Pratchett, Morgan S., Wilson, Shaun K., and Munday, Philip L. (2015) Effects of climate change on coral reef fishes. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 127-134.

Pollock, Laura J., Rosauer, Dan F., Thornhill, Andrew H., Kujala, Heini, Crisp, Michael D., Miller, Joseph T., and McCarthy, Michael A. (2015) Phylogenetic diversity meets conservation policy: small areas are key to preserving eucalypt lineages. Philosophical Transactions of the Royal Society B: Biological Sciences, 370. 20140007. pp. 1-10.

Perry, Chris T., Murphy, Gary N., Graham, Nicholas A.J., Wilson, Shaun K., Januchowski-Hartley, Fraser A., and East, Holly K. (2015) Remote coral reefs can sustain high growth potential and may match future sea-level trends. Scientific Reports, 5. 18289. pp. 1-8.

Pisapia, Chiara (2015) Spatial, temporal and taxonomic variation in the incidence of partial mortality among reef-building corals. PhD thesis, James Cook University.

Pecl, Gretta T., Ward, Tim M., Doubleday, Zoë A., Clarke, Steven, Day, Jemery, Dixon, Cameron, Frusher, Stewart, Gibbs, Philip, Hobday, Alistair J., Hutchinson, Neil, Jennings, Sarah, Jones, Keith, Li, Xiaoxu, Spooner, Daniel, and Stoklosa, Richard (2014) Rapid assessment of fisheries species sensitivity to climate change. Climatic Change, 127 (3). pp. 505-520.

Pratchett, Morgan S., Hoey, Andrew S., and Wilson, Shaun K. (2014) Reef degradation and the loss of critical ecosystem goods and services provided by coral reef fishes. Current Opinion in Environmental Sustainability, 7. pp. 37-43.

Pike, D.A., and Mitchell, J.C. (2013) Burrow-dwelling ecosystem engineers provide thermal refugia throughout the landscape. Animal Conservation, 16 (6). pp. 694-703.

Pike, David A. (2013) Forecasting range expansion into ecological traps: climate-mediated shifts in sea turtle nesting beaches and human development. Global Change Biology, 19 (10). pp. 3082-3092.

Puschendorf, Robert, Hodgson, Lauren, Alford, Ross A., Skerratt, Lee F., and VanDerWal, Jeremy (2013) Underestimated ranges and overlooked refuges from amphibian chytridiomycosis. Diversity and Distributions, 19 (10). pp. 1313-1321.

Pratchett, Morgan S., McCowan, Dominique, Maynard, Jeffrey A., and Heron, Scott (2013) Changes in bleaching susceptibility among corals subject to ocean warming and recurrent bleaching in Moorea, French Polynesia. PLoS ONE, 8 (7). e70443. pp. 1-10.

Prideaux, Bruce, McKercher, Bob, and McNamara, Karen Elizabeth (2013) Modelling a tourism response to climate change using a four stage problem definition and response framework. Asia Pacific Journal of Tourism Research, 18 (1-2). pp. 165-182.

Preece, N., van Oosterzee, P., Dale, A., Eberhard, R., Armstrong, G., Vella, K., and Sweatman, C. (2013) Resilience and Opportunity: regions and the roll-out of Australia's greenhouse gas abatement programs - a manual for Queensland's NRM regions. Manual. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Parsons, Scott A., Congdon, Robert A., Storlie, Collin J., Shoo, Luke P., and Williams, Stephen E. (2012) Regional patterns and controls of leaf decomposition in Australian tropical rainforests. Austral Ecology, 37 (7). pp. 845-854.

Perry, C.T., Edinger, E.N., Kench, P.S., Murphy, G.N., Smithers, S.G., Steneck, R.S., and Mumby, P.J. (2012) Estimating rates of biologically driven coral reef framework production and erosion: a new census-based carbonate budget methodology and applications to the reefs of Bonaire. Coral Reefs, 31 (3). pp. 853-868.

Perry, Chris T., Kench, Paul S., Smithers, Scott G., Riegl, Bernhard, Yamano, Hiroya, and O'Leary, Michael J. (2011) Implications of reef ecosystem change for the stability and maintenance of coral reef islands. Global Change Biology, 17 (12). pp. 3679-3696.

Pankhurst, Ned, and Munday, Philip (2011) Effects of climate change on fish reproduction and early life history stages. Marine and Freshwater Research, 62 (9). pp. 1015-1026.

Pratchett, Morgan S., Hoey, Andrew S., Wilson, Shaun K., Messmer, Vanessa, and Graham, Nicholas A.J. (2011) Changes in biodiversity and functioning of reef fish assemblages following coral bleaching and coral loss. Diversity, 3 (3). pp. 424-452.

Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J., and Cohen, Anne L. (2011) Projecting coral reef futures under global warming and ocean acidification. Science, 333 (6041). pp. 418-422.

Pecl, Gretta, Ward, Tim, Doubleday, Zoë, Clarke, Steven, Day, Jemery, Dixon, Cameron, Frusher, Stewart, Gibbs, Philip, Hobday, Alistair, Hutchinson, Neil, Jennings, Sarah, Jones, Keith, Li, Xiaoxu, Spooner, Daniel, and Stoklosa, Richard (2011) Risk Assessment of Impacts of Climate Change for Key Marine Species in South Eastern Australia. Part 1: fisheries and aquaculture risk assessment. Report. Fisheries Research and Development Corporation (FRDC), Deakin West, ACT, Australia.

Pecl, Gretta, Ward, Tim, Doubleday, Zoë, Clarke, Steven, Day, Jemery, Dixon, Cameron, Frusher, Stewart, Gibbs, Philip, Hobday, Alistair, Hutchinson, Neil, Jennings, Sarah, Jones, Keith, Li, Xiaoxu, Spooner, Daniel, and Stoklosa, Richard (2011) Risk Assessment of Impacts of Climate Change for Key Marine Species in South Eastern Australia. Part 2: species profiles. Report. Fisheries Research and Development Corporation (FRDC), Deakin West, ACT, Australia.

Parsons, Scott Anthony (2010) Decomposition, nutrient cycling and climate change in Australian tropical rainforests. PhD thesis, James Cook University.

Penman, Trent D., Pike, David A., Webb, Jonathan K., and Shine, Richard (2010) Predicting the impact of climate change on Australia's most endangered snake, Hoplocephalus bungaroides. Diversity and Distributions, 16 (1). pp. 109-118.

Pike, David A. (2009) Do green turtles modify their nesting seasons in response to environmental temperatures? Chelonian Conservation and Biology, 8 (1). pp. 43-47.

Pratchett, M.S., Wilson, S.K., Graham, N.A.J., Munday, P.L., Jones, G.P., and Polunin, N.V.C. (2009) Coral bleaching and consequences for motile reef organisms: past, present and uncertain future effects. In: van Oppen, M.J.H., and Lough, J.M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 205 . Springer, Germany, pp. 139-158.

Power, M.J., Marlon, J., Ortiz, N., Bartlein, P.J., Harrison, S.P., Mayle, F.E., Ballouche, A., Bradshaw, R.H.W., Carcaillet, C., Cordova, C., Mooney, S., Moreno, P.I., Prentice, I.C., Thonicke, K., Tinner, W., Whitlock, C., Zhang,, Y., Zhao, Y., Ali, A.A., Anderson, R.S., Beer, R., Behling, H., Briles, C., Brown, K.J., Brunelle, A., Bush, M., Camill, P., Chu, G.Q., Clark, J., Colombaroli, D., Connor, S., Daniau, A.L., Daniels, M., Dodson, J., Doughty, E., Edwards, M.E., Finsinger, W., Foster, D., Frechette, J., Gaillard, M.J., Gavin, D.G., Gobet, E., Haberle, S., Hallett, D.J., Higuera, P., Hope, G., Horn, S., Inoue, J., Kaltenrieder, P., Kennedy, L., Kong, Z.C., Larsen, C., Long, C.J., Lynch, J., Lynch, E.A., McGlone, M., Meeks, S., Mensing, S., Meyer, G., Minckley, T., Mohr, J., Nelson, D.M., New, J., Newnham, R., Noti, R., Oswald, W., Pierce, J., Richard, P.J.H., Rowe, C., Sanchez Goñi, M.F., Shuman, B.N., Takahara, H., Toney, J., Turney, C., Urrego-Sanchez, D.H., Umbanhowar, C., Vandergoes, M., Vanniere, B., Vescovi, E., Walsh, M., Wang, X., Williams, N., Wilmshurst, J., and Zhang, J.H. (2008) Changes in fire regimes since the Last Glacial Maximum: an assessment based on a global synthesis and analysis of charcoal data. Climate Dynamics, 30 (7-8). pp. 887-907.

Pratchett, Morgan S., Munday, Philip L., Wilson, Shaun K., Graham, Nicholas A.J., Cinner, Joshua E., Bellwood, David R., Jones, Geoffrey P., Polunin, Nicholas V.C., and McClanahan, Tim R. (2008) Effects of climate-induced coral bleaching on coral-reef fishes - ecological and economic consequences. Oceanography and Marine Biology: an annual review, 46. pp. 251-296.

Pressey, R.L. (2007) Conservation planning for a changing climate. In: Taylor, Martin, and Figgis, Penelope, (eds.) Protected Areas: Buffering Nature Against Climate Change. Proceedings of the WWF and IUCN World Commission on Protected Areas Symposium . World Wide Fund for Nature Australia, Sydney, NSW, Australia, pp. 85-89.

R

Ripple, William J., Wolf, Christopher, Newsome, Thomas M., Galetti, Mauro, Alamgir, Mohammed, Crist, Eileen, Mahmoud, Mahmoud I., and Laurance, William F. (2017) World Scientists' Warning to Humanity: a second notice. BioScience, 67 (12). pp. 1026-1028.

Rossi, Tullio, Nagelkerken, Ivan, Simpson, Stephen D., Pistevos, Jennifer C.A., Watson, Sue-Ann, Merillet, Laurene, Fraser, Peter, Munday, Philip L., and Connell, Sean D. (2015) Ocean acidification boosts larval fish development but reduces the window of opportunity for successful settlement. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1821). 20151954. pp. 1-9.

Rosauer, Dan F., Catullo, Renee A., VanDerWal, Jeremy, Moussalli, Adnan, Hoskin, Conrad J., and Moritz, Craig (2015) Lineage range estimation method reveals fine-scale endemism linked to Pleistocene stability in Australian rainforest herpetofauna. PLoS ONE, 10 (5). e0126274. pp. 1-22.

Rummer, Jodie (2015) Effects of ocean acidification on metabolic performance in coral reef fishes. In: [Presented at 145th Annual Meeting of the American Fisheries Society]. From: AFS 2015: 145th Annual Meeting of the American Fisheries Society, 16-20 August 2015, Portland, OR, USA.

Rodolfo-Metalpa, Riccardo, Hoogenboom, Mia O., Rottier , Cécile, Ramos-Esplá, Alfonso, Baker, Andrew C., Fine, Maoz, and Ferrier-Pagès, Christine (2014) Thermally tolerant corals have limited capacity to acclimatize to future warming. Global Change Biology, 20 (10). pp. 3036-3049.

Reside, April E., Ceccarelli, Daniela M., Isaac, Joanne L., Hilbert, David W., Moran, Cath, Llewelyn, John, Macdonald, Stewart, Hoskin, Conrad J., Pert, Petina, and Parsons, Jennifer (2014) Biodiversity: adaptation pathways and opportunities. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 1: introduction, biodiversity and ecosystem services. James Cook University, Cairns, QLD, Australia, pp. 11-74.

Rasheed, Michael A., McKenna, Skye A., Carter, Alexandra B., and Coles, Robert G. (2014) Contrasting recovery of shallow and deep water seagrass communities following climate associated losses in tropical north Queensland, Australia. Marine Pollution Bulletin, 83. pp. 491-499.

Roberts, David A., Birchenough, Silvana N.R., Lewis, Ceri, Sanders, Matthew B., Bolam, Thi, and Sheahan, Dave (2013) Ocean acidification increases the toxicity of contaminated sediments. Global Change Biology, 19 (2). pp. 340-351.

Rummer, Jodie L., Stecyk, Jonathan A.W., Couturier, Christine, Watson, Sue-Ann, Nilsson, Göran E., and Munday, Philip L. (2013) Elevated CO₂ enhances aerobic scope of a coral reef fish. Conservation Physiology, 1 (1). pp. 1-7.

Reside, April E., VanDerWal, Jeremy, Kutt, Alex, Watson , Ian, and Williams, Stephen (2012) Fire regime shifts affect bird species distributions. Diversity and Distributions, 18 (3). pp. 213-225.

Reside, April E., Watson, Ian, VanDerWal, Jeremy, and Kutt, Alex S. (2011) Incorporating low-resolution historic species location data decreases performance of distribution models. Ecological Modelling, 222 (18). pp. 3444-3448.

Roche, Ronan C., Perry, Chris T., Johnson, Kenneth G., Sultana, Kerry, Smithers, Scott G., and Thompson, Angus A. (2011) Mid-Holocene coral community data as baselines for understanding contemporary reef ecological states. Palaeogeography, Palaeoclimatology, Palaeoecology, 299 (1-2). pp. 159-167.

Reside, April E., VanDerWal, Jeremy, Watson, Ian, and Kutt, Alex (2010) Incorporating altered fire frequency scenarios in species distribution models improves climate change predictions for tropical savanna birds. In: ATBC 2010 Schedule of Presentations and Abstracts. pp. 192-193. From: ATBC 2010: The 2010 International Meeting of the Association for Tropical Biology and Conservation, 19-23 July 2010, Bali, Indonesia.

Rummer, Jodie L. (2009) Global warming could cancel 'journey of a thousand miles'. Journal of Experimental Biology, 212 (9). v-v.

Russell, Richard C., Currie, Bart J., Lindsay, Michael D., Mackenzie, John S., Ritchie, Scott A., and Whelan, Peter I. (2009) Dengue and climate change in Australia: predictions for the future should incorporate knowledge from the past. Medical Journal of Australia, 190 (5). pp. 265-268.

Rummer, J.L., Fangue, N.A., Jordan, H.L., Tiffany, B.N., Blansit, K.J., Galleher , S., Kirkpatrick, A., Kizlauskas, A.A., Pomory, C.M., and Bennett, W.A. (2009) Physiological tolerance to hyperthermia and hypoxia and effects on species richness and distribution of rockpool fishes of Loggerhead Key, Dry Tortugas National Park. Journal of Experimental Marine Biology and Ecology, 371. pp. 155-162.

Rasmussen, Cecily Ellen (1994) Anthropogenic disturbance of environmental signals retained in massive corals. PhD thesis, James Cook University.

S

Scott, Molly (2019) Spatial and temporal variation in movement patterns and behaviour of a large, coral reef mesopredator, Plectropomus leopardus, on the Great Barrier Reef, Australia. PhD thesis, James Cook University.

Sutummawong, Nantida (2017) Assessing the vulnerability of Thailand's forest birds to global change. PhD thesis, James Cook University.

Schrodt, Franziska, Domingues, Thomas F., Feldpausch, Ted, Saiz, Gustavo, Quesada, Carlos Alberto, Schwarze, Michael, Ishida, F. Yoko, Compaore, Halidou, Diallo, Adamo, Djagbletey, Gloria, Hien, Fidele, Sonké, Bonaventure, Toedoumg, Herman, Zapfack, Loius, Hiernaux, Pierre, Mougin, Eric, Bird, Michael I., Grace, John, Lewis, Simon L., Veenendaal, Elmar M., and Lloyd, Jon (2015) Foliar trait contrasts between African forest and savanna trees: genetic versus environmental effects. Functional Plant Biology, 42 (1). pp. 63-83.

Serrao-Neumann, Silvia , Harman, Ben, Leitch, Anne, and Low Choy, Darryl (2015) Public engagement and climate adaptation: insights from three local governments in Australia. Journal of Environmental Planning and Management, 58 (7). pp. 1196-1216.

Stella, J.S, Munday, P.L., Walker, S.P.W., Pratchett, M.S., and Jones, G.P. (2014) From cooperation to combat: adverse effect of thermal stress in a symbiotic coral-crustacean community. Oecologia, 174 (4). pp. 1187-1195.

Sørensen, Christina, Munday, Philip L., and Nilsson, Göran E. (2014) Aerobic vs. anaerobic scope: sibling species of fish indicate that temperature dependence of hypoxia tolerance can predict future survival. Global Change Biology, 20 (3). pp. 724-729.

Sunday, Jennifer M., Calosi, Piero, Dupont, Sam, Munday, Philip L., Stillman, Jonathon H., and Reusch, Thorsten B.H. (2014) Evolution in an acidifying ocean. Trends in Ecology and Evolution, 29 (2). pp. 117-125.

Storlie, Collin, Merino-Viteri, Andres, Phillips, Ben, VanDerWal, Jeremy, Welbergen, Justin, and Williams, Stephen (2014) Stepping inside the niche: microclimate data are critical for accurate assessment of species' vulnerability to climate change. Biology Letters, 10 (9). 20140576. pp. 1-4.

Scheffers, B.R., Phillips, Ben L., Laurance, William F., Sodhi, Navjot S., Diesmos, Arvin, and Williams, Stephen E. (2013) Increasing arboreality with altitude: a novel biogeographic dimension. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1770). 20131581. pp. 1-10.

Shaw, Emily C., Munday, Philip L., and McNeil, Ben I. (2013) The role of CO₂ variability and exposure time for biological impacts of ocean acidification. Geophysical Research Letters, 40 (17). pp. 4685-4688.

Shoo, Luke P., Hoffmann, Ary A., Garnett, Stephen, Pressey, Robert L., Williams, Yvette M., Taylor, Martin, Falconi, Lorena, Yates, Colin J., Scott, John K., Alagador, Diogo, and Williams, Stephen E. (2013) Making decisions to conserve species under climate change. Climatic Change, 119 (2). pp. 239-246.

Staunton, Kyran Michael (2013) The vulnerability of flightless ground beetles (Carabidae) to climate change in the Australian tropical rainforest. PhD thesis, James Cook University.

Simpson, Stephen D, Munday, Philip, Wittenrich, Matthew, Manassa, Rachel, Dixson, Danielle, Gagliano, Monica, and Yan, Hong Y (2011) Ocean acidification erodes crucial auditory behaviour in a marine fish. Biology Letters, 7 (6). pp. 917-920.

Stella, J.S., Munday, P.L., and Jones, G.P. (2011) Effects of coral bleaching on the obligate coral-dwelling crab Trapezia cymodoce. Coral Reefs, 30 (3). pp. 719-727.

Short, Fred T., Polidoro, Beth, Livingstone, Suzanne R., Carpenter, Kent E., Bandeira, Salomão, Bujang, Japar Sidik, Calumpong, Hilconida P., Carruthers, Tim J.B., Coles, Robert G., Dennison, William C., Erftemeijer, Paul L.A., Fortes, Miguel D., Freeman, Aaren S., Jagtap, T.G., Kamal, Abu Hena M., Kendrick, Gary A., Kenworthy, W. Judson, La Nafie, Yayu A., Nasution, Ichwan M., Orth, Robert J., Prathep, Anchana, Sanciangco, Jonnell C., van Tussenbroek, Brigitta, Vergara, Sheila G., Waycott, Michelle, and Zieman, Joseph C. (2011) Extinction risk assessment of the world's seagrass species. Biological Conservation, 144 (7). pp. 1961-1971.

Stella, Jessica S., Pratchett, Morgan S., Hutchings, Pat A., and Jones, Geoffrey P. (2011) Coral-associated invertebrates: diversity, ecology importance and vulnerability to disturbance. Oceanography and Marine Biology: an annual review, 49. pp. 43-104.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2011) Detrimental effects of host anemone bleaching on anemonefish populations. Coral Reefs, 30 (2). pp. 497-506.

Schwanz, Lisa E., Spencer, Ricky-John, Bowden, Rachel M., and Janzen, Fredric J. (2010) Climate and predation dominate juvenile and adult recruitment in a turtle with temperature-dependent sex determination. Ecology, 91 (10). pp. 3016-3026.

Shoo, Luke P., Storlie, Collin, Williams, Yvette M., and Williams, Stephen E. (2010) Potential for mountaintop boulder fields to buffer species against extreme heat stress under climate change. International Journal of Biometeorology, 54 (4). pp. 475-478.

Stella, J.S., Jones, G.P., and Pratchett, M.S. (2010) Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, 29 (4). pp. 957-973.

Seneca, François (2010) The molecular stress response in the Indo-Pacific model scleractinian coral, Acropora millepora. PhD thesis, James Cook University.

Stockwell, Brian, Jadloc, Claro Renato L., Abesamis, Rene A., Alcala, Angel C., and Russ, Garry R. (2009) Trophic and benthic responses to no-take marine reserve protection in the Philippines. Marine Ecology Progress Series, 389. pp. 1-15.

Shoo, Luke P., Anderson, Alex, and Williams, Stephen (2009) On the isolated population of Lewin’s Honeyeater (Meliphaga lewinii amphochlora) from the McIlwraith Range uplands, Cape York Peninsula, Australia: estimates of population size and distribution. Emu: austral ornithology, 109 (4). pp. 288-293.

Srinivasan, M., and Jones, G.P. (2006) Extended breeding and recruitment periods of fishes on a low latitude coral reef. Coral Reefs, 25 (4). pp. 673-682.

Stead, S.M., Daw, T., Graham, N.A.J., Gray, T.S., Polunin, N.V.C., Robinson, J., and McClanahan, T.R. (2006) Trends in climate change, coastal governance, coral reef ecology and socio-economic variation in the Seychelles. In: World Martitime Technology Conference 2006 (1) From: World Maritime Technology Conference, 08 March 2006, Westminster, London, UK.

Smith, Luke Darren (2005) Resilience and recovery of coral communities on an isolated reef system in Western Australia following a catastrophic mortality event. PhD thesis, James Cook University.

T

Tsey, Komla, and Warne, Sarah-Jane (2018) The feasibility of cassava as sustainable source of clean energy production in Ghana: a concept proposal. OIDA International Journal of Sustainable Development, 11 (7). pp. 25-28.

Thomas, Christopher J., Bridge, Thomas C.L., Figueiredo, Joana, Deleersnijder, Eric, and Hanert, Emmanuel (2015) Connectivity between submerged and near-sea-surface coral reefs: can submerged reef populations act as refuges? Diversity and Distributions, 21 (10). pp. 1254-1266.

Tremblay, P., Grover, R., Maguer, J.F., Hoogenboom, M., and Ferrier-Pagès, C. (2014) Carbon translocation from symbiont to host depends on irradiance and food availability in the tropical coral Stylophora pistillata. Coral Reefs, 33 (1). pp. 1-13.

Turton, Stephen M. (2014) Climate change and rainforest tourism in Australia. In: Prideaux, Bruce, (ed.) Rainforest Tourism, Conservation and Management: challenges for sustainable development. Routledge, New York, NY, USA, pp. 70-86.

Torello Raventos, Mireia (2014) Environmental controls on wood density in tropical forests. PhD thesis, James Cook University.

Turton, Stephen M., Hill, Rosemary, and Moran, Catherine (2014) Introduction. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 1: introduction, biodiversity and ecosystem services. James Cook University, Cairns, QLD, Australia, pp. 1-10.

Taylor, Richard G., Scanlon, Bridget, Döll, Petra, Rodell, Matt, van Beek, Rens, Wada, Yoshihide, Longuevergne, Laurent, Leblanc, Marc, Famiglietti, James S., Edmunds, Mike, Konikow, Leonard, Green, Timothy R., Chen, Jianyao, Taniguchi, Makoto, Bierkens, Marc F.P., MacDonald, Alan, Fan, Ying, Maxwell, Reed M., Yechieli, Yossi, Gurdak, Jason J., Allen, Diana M., Shamsudduha, Mohammad, Hiscock, Kevin, Yeh, Pat J-F., Holman, Ian, and Treidel, Holger (2013) Ground water and climate change. Nature Climate Change, 3 (4). pp. 322-329.

Taylor, Subhashni, and Kumar, Lalit (2013) Potential distribution of an invasive species under climate change scenarios using CLIMEX and soil drainage: a case study of Lantana camara L. in Queensland, Australia. Journal of Environmental Management, 114. pp. 414-422.

Turton, Stephen M. (2013) Tropical cyclones and forest dynamics under a changing climate: what are the long-term implications for tropical forest canopies in the cyclone belt? In: Lowman, Margaret, Devy, Soubadra, and Ganesh, T., (eds.) Treetops at Risk: challenges of global canopy ecology and conservation. Springer, New York, USA, pp. 105-111.

Thomas, C.R., Gordon, I.J., Wooldridge, S., and Marshall, P. (2012) Balancing the tradeoffs between ecological and economic risks for the Great Barrier Reef: a pragmatic conceptual framework. Human and Ecological Risk Assessment, 18 (1). pp. 69-91.

Turton, Steve (2008) Book review of "Tropical Rainforest Responses to Climatic Change" by Mark B. Bush and John R. Flenley, Springer, and "The Atlas of Climate Change: Mapping the World's Greatest Challenge" by Kirstin Dow and Thomas E. Dowling, University of California Press. Geographical Research, 46 (4). pp. 473-474.

Taylor, Cheryl (2005) Book review of "The Great Barrier Reef: history, science, heritage" by James Bowen and Margarita Bowen, Cambridge University Press, Cambridge, UK. Australian Historical Studies, 36 (125). pp. 176-177.

True, James (2004) Massive Porites corals as indicators of environmental changes. PhD thesis, James Cook University.

U

Unsworth, Richard K.F., Collier, Catherine J., Waycott, Michelle, McKenzie, Len J., and Cullen-Unsworth, Leanne C. (2015) A framework for the resilience of seagrass ecosystems. Marine Pollution Bulletin, 100 (1). pp. 34-46.

Unsworth, Richard K.F., Collier, Catherine J., Henderson, Gideon M., and McKenzie, Len J. (2012) Tropical seagrass meadows modify seawater carbon chemistry: implications for coral reefs impacted by ocean acidification. Environmental Research Letters, 7 (2). pp. 1-9.

V

Van Oosterzee, Penny, and Duke, Norman (2017) Extreme weather likely behind worst recorded mangrove dieback in northern Australia. The Conversation, 14 March 2017. pp. 1-6.

Venter, Michelle (2015) Cloud to coast: assessing, monitoring and managing forest carbon in Papua New Guinea. PhD thesis, James Cook University.

Veilleux, Heather D., Ryu, Taewoo, Donelson, Jennifer M., Van Herwerden, Lynne, Seridi, Loqmane, Ghosheh, Yanal, Berumen, Michael L., Leggat, William, Ravasi, Timothy, and Munday, Philip L. (2015) Molecular processes of transgenerational acclimation to a warming ocean. Nature Climate Change, 5. pp. 1074-1078.

Van Oosterzee, Penny, Dale, Allan, and Preece, Noel (2014) Integrating agriculture and climate change mitigation at landscape scale: implications from an Australian case study. Global Environmental Change, 29. pp. 306-317.

Vail, Alexander L., and McCormick, Mark I. (2011) Metamorphosing reef fishes avoid predator scent when choosing a home. Biology Letters, 7 (6). pp. 921-924.

Vail, A.L., and Sinclair-Taylor, T. (2011) Mass schooling and mortality of Canthigaster bennetti in Sulawesi. Coral Reefs, 30 (1). p. 251.

W

Womack, A.M., Artaxo, P.E., Ishida, F.Y., Mueller, R.C., Saleska , S.R., Wiedemann, K.T., Bohannan, B.J.M., and Green, J.L (2015) Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest. Biogeosciences, 12. pp. 6337-6349.

Welbergen, Justin, Meade, Jessica, Storlie, Collin, Vanderwal, Jeremy, Dalziell, Anastasia, Hodgson, Lauren, Krockenberger, Andrew, and Williams, Stephen (2015) Climate change and the impacts of extreme events on Australia's Wet Tropics biodiversity. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Watson, Sue-Ann (2015) Giant clams and rising CO2: light may ameliorate effects of ocean acidification on a solar-powered animal. PLoS ONE, 10 (6). e0128405. pp. 1-18.

Woolsey, Erika S. (2014) Coral larval ecology and biogeography in a warming ocean. PhD thesis, James Cook University.

Welch, Megan J., Welsh, Justin Q., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip (2014) Effects of elevated CO(2) on fish behaviour undiminished by transgenerational acclimation. Nature Climate Change, 4. pp. 1086-1089.

Watson, Sue-Ann, Lefevre, Sjannie, McCormick, Mark I., Domenici, Paolo, Nilsson, Göran E., and Munday, Philip L. (2014) Marine mollusc predator-escape behaviour altered by near-future carbon dioxide levels. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1774). 20132377. pp. 1-9.

Weber, Lui C., VanDerWal, Jeremy, Schmidt, Susanne, McDonald, William J.F., and Shoo, Luke P. (2014) Patterns of rain forest plant endemism in subtropical Australia relate to stable mesic refugia and species dispersal limitations. Journal of Biogeography, 41 (2). pp. 222-238.

Wilson, Shaun K., Graham, Nicholas A.J., and Pratchett, Morgan S. (2014) Susceptibility of butterflyfish to habitat disturbance: do 'chaets' ever prosper? In: Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 226-245.

Warren, R., VanDerWal, J. , Price, J., Welbergen, J.A., Atkinson, I., Ramirez-Villegas, J., Osborn, T.J., Jarvis, A., Shoo, L.P., Williams, S.E., and Lowe, J. (2013) Quantifying the benefit of early climate change mitigation in avoiding biodiversity loss. Nature Climate Change, 3. pp. 678-682.

Weeks , S.J., Steinberg, C., and Congdon, B.C. (2013) Oceanography and seabird foraging: within-season impacts of increasing sea-surface temperature on the Great Barrier Reef. Marine Ecology Progress Series, 490. pp. 247-254.

Wooldridge, Scott Andrew, Done, Terence J., Thomas, Colette R., Gordon, Iain I., Marshall, Paul A., and Jones, Roger N. (2012) Safeguarding coastal coral communities on the central Great Barrier Reef (Australia) against climate change: realizable local and global actions. Climatic Change, 112 (3). pp. 945-961.

Woolsey, Erika, Bainbridge, Scott J., Kingsford, Michael J., and Byrne, Maria (2012) Impacts of cyclone Hamish at One Tree Reef: integrating environmental and benthic habitat data. Marine Biology, 159 (4). pp. 793-803.

Waycott, Michelle, McKenzie, Len, Mellors, Jane E., Ellison, Joanna C., Sheaves, Marcus T., Collier, Catherine, Schwarz, Anne-Maree, Webb, Arthur, Johnson, Johanna E., and Payri, Claude E. (2011) Vulnerability of mangroves, seagrasses and intertidal flats in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 297-368.

Welladsen, Heather M., Heimann, Kirsten, and Southgate, Paul C. (2011) The effects of exposure to near-future levels of ocean acidification on activity and byssus Production of the Akoya pearl oyster, Pinctada fucata. Journal of Shellfish Research, 30 (1). pp. 85-88.

Welladsen, Heather M., Southgate, Paul C., and Heimann, Kirsten (2010) The effects of exposure to near-future levels of ocean acidification on shell characteristics of Pinctada fucata (Bivalvia: Pteriidae). Molluscan Research, 30 (3). pp. 125-130.

Wilson, S.K., Adjeroud, M., Bellwood, D.R., Berumen, M.L., Booth, D., Bozec, Y.-Marie, Chabanet, P., Cheal, A., Cinner, J., Depczynski, M., Feary, D.A., Gagliano, M., Graham, Nicholas, Halford, A.H., Halpern, B.S., Harborne, A.R., Hoey, A.S., Holbrook, S.J., Jones, G.P., Kulbiki, M., Letourneur, Y., De Loma, T.L., McClanahan, T, McCormick, M.I., Meekan, M.G., Mumby, P. J., Munday, P.L., Öhman, M.C., Pratchett, M.S., Riegl, B., Sano, M., Schmitt, R.J., and Syms, C. (2010) Crucial knowledge gaps in current understanding of climate change impacts on coral reef fishes. Journal of Experimental Biology, 213. pp. 894-900.

Wilson, S.K., Fisher, R., Pratchett, M.S., Graham, N.A.J., Dulvy, N.K., Turner, R.A., Cakacaka, A., Polunin, N.V.C., and Rushton, S.P. (2008) Exploitation and habitat degradation as agents of change within coral reef fish communities. Global Change Biology, 14 (12). pp. 2796-2809.

Wilson, Robyn F., Goosem, Miriam W., and Wilson, Gary W. (2008) Resilience of arboreal folivores to habitat damage by a severe tropical cyclone. Austral Ecology, 33 (4). pp. 573-579.

Williams, Stephen E., Isaac, Joanne L., and Shoo, Luke P. (2008) The impact of climate change on the biodiversity and ecosystem functions of the wet tropics. In: Stork, Nigel E., and Turton, Stephen M., (eds.) Living in a Dynamic Tropical Forest Landscape. Blackwell Publishing, Malden. MA, USA, pp. 282-294.

Williams, Stephen E., and Middleton, Jeffery (2008) Climatic seasonality, resource bottlenecks, and abundance of rainforest birds: implications for global climate change. Diversity and Distributions, 14 (1). pp. 69-77.

Williams, Stephen E., Shoo, Luke P., Isaac, Joanne L., Hoffmann, Ary A., and Langham, Gary (2008) Towards an integrated framework for assessing the vulnerability of species to climate change. PLoS Biology, 6 (12). e325. pp. 2621-2626.

Wilson, Shaun K., Graham, Nicholas A.J., Pratchett, Morgan S., Jones, Geoffrey P., and Polunin, Nicholas V.C. (2006) Multiple disturbances and the global degradation of coral reefs: are reef fishes at risk or resilient? Global Change Biology, 12 (11). pp. 2220-2234.

Y

Young, Jock W., Hunt, Brian P.V., Cook, Timothée R., Llopiz, Joel K., Hazen, Elliott L., Pethybridge, Heidi R., Ceccarelli, Daniela, Lorrain, Anne, Olson, Robert J., Allain, Valerie, Menkes, Christophe, Patterson, Toby, Nicol, Simon, Lehodey, Patrick, Kloser, Rudy J., Arrizabalaga, Haritz, and Choy, C. Anela (2015) The trophodynamics of marine top predators: current knowledge, recent advances and challenges. Deep-Sea Research Part II: topical studies in oceanography, 113. pp. 170-187.

Z

Zinke, J., Hoell, A., Lough, J.M., Feng, M., Kuret, A.J., Clarke, H., Ricca, V., Rankenburg, K., and McCulloch, M.T. (2015) Coral record of southeast Indian Ocean marine heatwaves with intensified Western Pacific temperature gradient. Nature Communications, 6. 8562.

Zamora-Vilchis, Itzel (2013) Host-parasite interactions: bird immune genes, blood parasites and climate change implications. PhD thesis, James Cook University.