Items where Subject is "06 BIOLOGICAL SCIENCES > 0603 Evolutionary Biology > 060309 Phylogeny and Comparative Analysis"

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Crayn, Darren M. (2018) Plant systematics and biogeography in the Australasian tropics. Australian Systematic Botany, 31 (5-6). i-iii.

Colmant, Agathe M.G., Etebari, Kayvan, Webb, Cameron E., Ritchie, Scott A., Jansen, Cassie C., van den Hurk, Andrew F., Bielefeldt-Ohmann, Helle, Hobson-Peters, Jody, Asgari, Sassan, and Hall, Roy A. (2017) Discovery of new orbiviruses and totivirus from Anopheles mosquitoes in Eastern Australia. Archives of Virology, 162 (11). pp. 3529-3534.

Crayn, Darren M. (2016) The Australasian Systematic Botany Society 2015 conference - papers and perspectives. Australian Systematic Botany, 29 (3). iii-iv.

Hernandez, A., Gervais, C.R., Rummer, J.L., and Porter, M.E. (2016) Comparing submerged walking and swimming kinematics in epaulette sharks. Integrative and Comparative Biology, 56 (Suppl 1). E301-E301.

Gervais, C., Mourier, J., and Rummer, J.L. (2016) Developing in warm water: irregular colouration and patterns of a neonate elasmobranch. Marine Biodiversity, 46 (4). pp. 773-774.

Hall, Nathan E., Hanzak, Jan, Allcock, A. Louise, Cooke, Ira R., Ogura, Atsushi, and Strugnell, Jan M. (2016) The complete mitochondrial genome of the pygmy squid, Idiosepius (Cephalopoda: Decapodiformes): the first representative from the family Idiosepiidae. Mitochondrial DNA Part A: DNA mapping, sequencing and analysis, 27 (1). pp. 5-6.

Laity, Tania, Laffan, Shawn W., González-Orozco, Carlos E., Faith, Daniel P., Rosauer, Dan F., Byrne, Margaret, Miller, Joseph T., Crayn, Darren, Costion, Craig, Moritz, Craig C., and Newport, Karl (2015) Phylodiversity to inform conservation policy: an Australian example. Science of the Total Environment, 534. pp. 131-143.

Heller, Sascha, Leme, Elton M.C., Schulte, Katharina, Benko-Iseppon, Ana M., and Zizka, Georg (2015) Elucidating phylogenetic relationships in the Aechmea alliance: AFLP analysis of Portea and the Gravisia complex (Bromeliaceae, Bromelioideae). Systematic Botany, 40 (3). pp. 716-725.

Holzmeyer, Laura, Duretto, Marco, Crayn, Darren, Hörandl, Elvira, Heslewood, Margaret, Jayanthan, Janani, and Appelhans, Marc (2015) Phylogeny of Acronychia (Rutaceae) and first insights into its historical biogeography and the evolution of fruit characters. PLoS ONE, 10 (8). e0136296. pp. 1-22.

Zhang, Liang, Rothfels, Carl J., Ebihara, Atsushi, Schuettpelz, Eric, Le Péchon, Timothée, Kamau, Peris, He , Hai, Zhou, Xin-Mao, Prado, Jefferson, Field, Ashley, Yatskievych, George, Gao, Xin-Fen, and Zhang, Li-Bing (2015) A global plastid phylogeny of the brake fern genus Pteris (Pteridaceae) and related genera in the Pteridoideae. Cladistics, 31 (4). pp. 406-423.

Huerlimann, Roger, Zenger, Kyall R., Jerry, Dean R., and Heimann, Kirsten (2015) Phylogenetic analysis of nucleus-encoded acetyl-CoA carboxylases targeted at the cytosol and plastid of algae. PLoS ONE, 10 (7). e0131099. pp. 1-10.

Nagalingum, Nathalie S., Knerr, Nunzio, Laffan, Shawn W., González-Orozco, Carlos E., Thornhill, Andrew H., Miller, Joseph T., and Mishler, Brent D. (2015) Continental scale patterns and predictors of fern richness and phylogenetic diversity. Frontiers in Genetics, 6. 132. pp. 1-14.

Costion, Craig M., Edwards, Will, Ford, Andrew J., Metcalfe, Daniel J., Cross, Hugh B., Harrington, Mark G., Richardson, James E., Hilbert, David W., Lowe, Andrew, and Crayn, Darren M. (2015) Using phylogenetic diversity to identify ancient rain forest refugia and diversification zones in a biodiversity hotspot. Diversity and Distributions, 21 (3). pp. 1-11.

Bromham, Lindell, Hua, Xia, Lanfear, Robert, and Cowman, Peter F. (2015) Exploring the relationships between mutation rates, life history, genome size, environment, and species richness in flowering plants. American Naturalist, 185 (4). pp. 507-524.

Hua, Xia, Cowman, Peter, Warren, Dan, and Bromham, Lindell (2015) Longevity is linked to mitochondrial mutation rates in rockfish: a test using poisson regression. Molecules and Cells, 32 (10). pp. 2633-2645.

Crayn, Darren M., Winter, Klaus, Schulte, Katharina, and Smith, J. Andrew C. (2015) Photosynthetic pathways in Bromeliaceae: phylogenetic and ecological significance of CAM and C3 based on carbon isotope ratios for 1893 species. Botanical Journal of the Linnean Society, 178 (2). pp. 169-221.

Dufresnes, Christophe, Borzée, Amaël, Horn, Agnes, Stöck, Matthias, Ostini, Massimo, Sermier, Roberto, Wassef, Josef, Litvinchuck, Spartak N., Kosch, Tiffany A., Waldman, Bruce, Jang, Yikweon, Brelsford, Alan, and Perrin, Nicholas (2015) Sex-chromosome homomorphy in Palearctic tree frogs results from both turnovers and XY recombination. Molecular Biology and Evolution, 32 (9). pp. 2328-2337.

Harter, T.S., Morrison, P.R., Mandelman, J.W., Rummer, J.L., Farrell, A.P., Brill, R.W., and Brauner, C.J. (2015) Validation of the i-STAT system for the analysis of blood gases and acid-base status in juvenile sandbar shark (Carcharhinus plumbeus). Conservation Physiology, 3 (1). cov002. pp. 1-10.

Brozynska, Marta, Omar, Ernnie Syafika, Furtado, Agnelo, Crayn, Darren, Simon, Bryan, Ishikawa, Ryuji, and Henry, Robert James (2014) Chloroplast genome of novel rice germplasm identified in Northern Australia. Tropical Plant Biology, 7 (3). pp. 111-120.

Murray, Shauna, Momigliano, Paolo, Heimann, Kirsten, and Blair, David (2014) Molecular phylogenetics and morphology of Gambierdiscus yasumotoi from tropical eastern Australia. Harmful Algae, 39. pp. 242-252.

Cirés, Samuel, Alvarez-Roa, Carlos, Wood, Susanna A., Puddick, Jonathan, Loza, Virginia, and Heimann, Kirsten (2014) First report of microcystin-producing Fischerella sp. (Stigonematales, Cyanobacteria) in tropical Australia. Toxicon, 88. pp. 62-66.

Louzada, Rafael B., Schulte, Katharina, Wanderley, Maria das Graças L., Silvestro, Daniele, Zizka, Georg, Barfuss, Michael H.J., and Palma-Silva, Clarisse (2014) Molecular phylogeny of the Brazilian endemic genus Orthophytum (Bromelioideae, Bromeliaceae) and its implications on morphological character evolution. Molecular Phylogenetics and Evolution, 77. pp. 54-64.

Gao, Zeqian, Wang, Miao, Blair, David, Zheng, Yadong, and Dou, Yongxi (2014) Phylogenetic analysis of the endoribonuclease Dicer family. PLoS ONE, 9 (4). e95350. pp. 1-7.

Kitahara, Marcelo V., Lin, Mei-Fang, Forêt, Sylvain, Huttley, Gavin, Miller, David J., and Chen, Chaolun Allen (2014) The "naked coral" hypothesis revisited: evidence for and against Scleractinian monophyly. PLoS One, 9 (4). e94774. pp. 1-13.

Givnish, Thomas J., Barfuss, Michael H.J., Van Ee, Benjamin, Riina, Ricarda, Schulte, Katharina, Horres, Ralf, Gonsiska, Philip A., Jabaily, Rachel S., Crayn, Darren M., Smith, J. Andrew C., Winter, Klaus, Brown, Gregory K., Evans, Timothy M., Holst, Bruce K., Luther, Harry, Till, Walter, Zizka, Georg, Berry, Paul E., and Sytsma, Kenneth J. (2014) Adaptive radiation, correlated and contingent evolution, and net species diversification in Bromeliaceae. Molecular Phylogenetics and Evolution, 71. pp. 55-78.

Silvestro, Daniele, Zizka, Georg, and Schulte, Katharina (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). Evolution, 68 (1). pp. 163-175.

Blair, David, McMahon, Adrian, McDonald, Brenda, Tikel, Daniela, Waycott, Michelle, and Marsh, Helene (2014) Pleistocene sea level fluctuations and the phylogeography of the dugong in Australian waters. Marine Mammal Science, 30 (1). pp. 104-121.

Hundt, Peter J., Iglésias, Samuel P., Hoey, Andrew S., and Simons, Andrew M. (2014) A multilocus molecular phylogeny of combtooth blennies (Percomorpha: Blennioidei: Blenniidae): multiple invasions of intertidal habitats. Molecular Phylogenetics and Evolution, 70. pp. 47-56.

Gitai, Jailson, Paule, Juraj, Zizka, Georg, Schulte, Katharina, and Benko-Iseppon, Ana Maria (2014) Chromosome numbers and DNA content in Bromeliaceae: additional data and critical review. Botanical Journal of the Linnean Society, 176 (3). pp. 349-368.

Davis, Aaron M., Unmack, Peter J., Pusey, Bradley J., Pearson, Richard G., and Morgan, David L. (2014) Effects of an adaptive zone shift on morphological and ecological diversification in terapontid fishes. Evolutionary Ecology, 28 (2). pp. 205-227.

Cowman, Peter F. (2014) Historical factors that have shaped the evolution of tropical reef fishes: a review of phylogenies, biogeography, and remaining questions. Frontiers in Genetics, 5. 394. pp. 1-15.

Mishler, Brent D., Knerr, Nunzio, González-orozco, Carlos E., Thornhill, Andrew H., Laffan, Shawn W., and Miller, Joseph T. (2014) Phylogenetic measures of biodiversity and neo- and paleo-endemism in Australian Acacia. Nature Communications, 5. 4473. pp. 1-10.

Zheng, Yadong, Blair, David, and Bradley, Janette E. (2013) Phyletic distribution of fatty acid-binding protein genes. PLoS ONE, 8 (10). e77636. pp. 1-9.

Duchene, David, Klanten, Selma O., Munday, Philip L., Herler, Jürgen, and van Herwerden, Lynne (2013) Phylogenetic evidence for recent diversification of obligate coral-dwelling gobies compared with their host corals. Molecular Phylogenetics and Evolution, 69 (1). pp. 123-132.

Hodge, Jennifer R., Read, Charmaine I., Bellwood, David R., and van Herwerden, Lynne (2013) Evolution of sympatric species: a case study of the coral reef fish genus Pomacanthus (Pomacanthidae). Journal of Biogeography, 40 (9). pp. 1676-1687.

Yeoh, Suat Hui, Ho, Simon Y.W., Thornhill, Andrew H., and Foley, William J. (2013) Regional population expansion in Eucalyptus globulus. Molecular Phylogenetics and Evolution, 68 (3). pp. 498-501.

Cutmore, Scott C., Miller, Terrence L., Curran, Stephen S., Bennett, Michael B., and Cribb, Thomas H. (2013) Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112 (8). pp. 3063-3074.

Miller, T.L., and Adlard, R.D. (2013) Unicapsula species (Myxosporea: Trilosporidae) of Australian marine fishes, including the description of Unicapsula andersenae n. sp. in five teleost families off Queensland, Australia. Parasitology Research, 112 (8). pp. 2945-2957.

Bott, Nathan J., Miller, Terrence L., and Cribb, Thomas H. (2013) Bucephalidae (Platyhelminthes: Digenea) of Plectropomus (Serranidae: Epinephelinae) in the tropical Pacific. Parasitology Research, 112 (7). pp. 2561-2584.

Jersakova, Jana, Travnicek, Pavel, Kubatova, Barbora, Krejcikova, Jana, Urfus, Tomas, Liu, Zhong-Jian, Lamb, Anthony, Ponert, Jan, Schulte, Katharina, Curn, Vladislav, Vrana, Jan, Leitch, Ilia J., and Suda, Jan (2013) Genome size variation in Orchidaceae subfamily Apostasioideae: filling the phylogenetic gap. Botanical Journal of the Linnean Society, 172 (1). pp. 95-105.

Wagner, Natascha, Silvestro, Daniele, Brie, David, Ibisch, Pierre L., Zizka, Georg, Weising, Kurt, and Schulte, Katharina (2013) Spatio-temporal evolution of Fosterella (Bromeliaceae) in the Central Andean biodiversity hotspot. Journal of Biogeography, 40 (5). pp. 869-880.

Kitahara, Marcelo V., Cairns, Stephen D., Stolarski, Jaroslaw, and Miller, David J. (2013) Deltocyathiidae, an early-diverging family of Robust corals (Anthozoa, Scleractinia). Zoologica Scripta, 42 (2). pp. 201-212.

Garda, Adrian A., Wiederhecker, Helga C., Gainsbury, Allison M., Costa, Gabriel C., Pyron, Alexander, Calazans Vieira, Gustavo H., Werneck, Fernanda P., and Colli, Guarino R. (2013) Microhabitat variation explains local-scale distribution of terrestrial Amazonian lizards in Rondônia, Western Brazil. Biotropica, 45 (2). pp. 245-252.

Devi, K. Rekha, Narain, Kanwar, Mahanta, Jagadish, Nirmolia, Tulika, Blair, David, Saikia, Sidhartha P., and Agatsuma, Takeshi (2013) Presence of three distinct genotypes within the Paragonimus westermani complex in northeastern India. Parasitology, 140 (1). pp. 76-86.

Sotowa, Masahiro, Ootsuka, Kenta, Kobayashi, Yuu, Hao, Yin, Tanaka, Katsunori, Ichitani, Katsuyuki, Flowers, Jonathan M., Purugganan, Michael D., Nakamura, Ikuo, Sato, Yo-Ichiro, Sato, Tadashi, Crayn, Darren, Simon, Bryan, Waters, Daniel L. E., Henry, Robert J., and Ishikawa, Ryuji (2013) Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms. Rice, 6. 26. pp. 1-18.

Simo-Droissart, Murielle, Micheneau, Claire, Sonké, Bonaventure, Droissart, Vincent, Plunkett, Gregory M., Lowry, Porter P., Hardy, Olivier J., and Stévart, Tariq (2013) Morphometrics and molecular phylogenetics of the continental African species of Angraecum section Pectinaria (Orchidaceae). Plant Ecology and Evolution, 146 (3). pp. 295-309.

Bromham, Lindell, Cowman, Peter F., and Lanfear, Robert (2013) Parasitic plants have increased rates of molecular evolution across all three genomes. Molecular Cancer Therapeutics, 13 (126). pp. 1-11.

Reyes-Bermudez, Alejandro, Miller, David J., and Sprungala, Susanne (2012) The neuronal calcium sensor protein acrocalcin: a potential target of calmodulin regulation during development in the coral Acropora millepora. PLoS ONE, 7 (12). 0051689. pp. 1-8.

Thornhill, Andrew H., Popple, Lindsay W., Carter, Richard J., Ho, Simon Y.W., and Crisp, Michael D. (2012) Are pollen fossils useful for calibrating relaxed molecular clock dating of phylogenies? A comparative study using Myrtaceae. Molecular Phylogenetics and Evolution, 63 (1). pp. 15-27.

Oza, Anuja U., Lovett, Katharine E., Williams, Stephen E., and Moritz, Craig (2012) Recent speciation and limited phylogeographic structure in Mixophyes frogs from the Australian Wet Tropics. Molecular Phylogenetics and Evolution, 62 (1). pp. 407-413.

Zhao, Guang-Hui, Li, Juan, Blair, David, Li, Xiao-Yan, Elsheikha, Hany M., Lin, Rui-Qing, Zou, Feng-Cai, and Zhu, Xing-Quan (2012) Biotechnological advances in the diagnosis, species differentiation and phylogenetic analysis of Schistosoma spp. Biotechnology Advances, 30 (6). pp. 1381-1389.

Pike, David A., Andrews, Robin M., and Du, Wei-Guo (2012) Eggshell morphology and gekkotan life-history evolution. Evolutionary Ecology, 26 (4). pp. 847-861.

Thaenkham, Urusa, Blair, David, Nawa, Yukifumi, and Waikagul, Jitra (2012) Families Opisthorchiidae and Heterophyidae: are they distinct? Parasitology International, 61 (1). pp. 90-93.

Thornhill, Andrew H., and Crisp, Michael D. (2012) Phylogenetic assessment of pollen characters in Myrtaceae. Australian Systematic Botany, 25 (3). pp. 171-187.

Karan , M., Evans, D.S., Reilly, D., Schulte, K., Wright, C., Innes, D., Holton, T.A., Nikles, D.G., and Dickinson, G.R. (2012) Rapid microsatellite marker development for African mahogany (Khaya senegalensis, Meliaceae) using next-generation sequencing and assessment of its intra-specific genetic diversity. Molecular Ecology Resources, 12 (2). pp. 344-353.

Johnson, Karen A., Holland, Barbara R., Heslewood, Margaret M., and Crayn, Darren M. (2012) Supermatrices, supertrees and serendipitous scaffolding: Inferring a well-resolved, genus-level phylogeny of Styphelioideae (Ericaceae) despite missing data. Molecular Phylogenetics and Evolution, 62 (1). pp. 146-158.

Kitahara, Marcelo V., Stolarski, Jaroslaw, Cairns, Stephen D., Benzoni, Francesca, Stake, Joel L., and Miller, David J. (2012) The first modern solitary Agariciidae (Anthozoa, Scleractinia) revealed by molecular and microstructural analysis. Invertebrate Systematics, 26 (3). pp. 303-315.

Lin, Mei-Fang, Kitahara, Marcelo V., Tachikawa, Hiroyuki, Keshavmurthy, Shashank, and Chen, Chaolun Allen (2012) A new shallow-water species, Polycyathus chaishanensis sp nov (Scleractinia: Caryophylliidae), from Chaishan, Kaohsiung, Taiwan. Zoological Studies, 51 (2). pp. 213-221.

Costion, Craig, Ford, Andrew, Cross, Hugh, Crayn, Darren, Harrington, Mark, and Lowe, Andrew (2011) Plant DNA barcodes can accurately estimate species richness in poorly known floras. PLoS ONE, 6 (11). e26841. pp. 1-9.

Givnish, Thomas J., Barfuss, Michael H.J., Van Ee, Benjamin, Riina, Ricarda, Schulte, Katharina, Horres, Ralf, Gonsiska, Philip A., Jabaily, Rachel S., Crayn, Darren M., Smith, J. Andrew C., Winter, Klaus, Brown, Gregory K., Evans, Timothy M., Holst, Bruce K., Luther, Harry, Till, Walter, Zizka, Georg, Berry, Paul E., and Sytsma, Kenneth J. (2011) Phylogeny, adaptive radiation, and historical biogeography in Bromeliaceae: insights from an eight-locus plastid phylogeny. American Journal of Botany, 98 (5). pp. 872-895.

Crisp, Michael D., Burrows, Geoffrey E., Cook, Lyn G., Thornhill, Andrew H., and Bowman, David M.J.S. (2011) Flammable biomes dominated by eucalypts originated at the Cretaceous–Palaeogene boundary. Nature Communications, 2. 193. pp. 1-8.

Janiszewska, Katarzyna, Stolarski, Jarosław, Benzerara, Karim, Meibom, Anders, Mazur, Maciej, Kitahara, Marcelo V., and Cairns, Stephen D. (2011) A unique skeletal microstructure of the deep-sea micrabaciid scleractinian corals. Journal of Morphology, 272 (2). pp. 191-203.

Kerr, Alexander M., Baird, Andrew H., and Hughes, Terry P. (2011) Correlated evolution of sex and reproductive mode in corals (Anthozoa: Scleractinia). Proceedings of the Royal Society of London Series B, Biological Sciences, 278 (1702). pp. 75-81.

Forêt, Sylvain, Seneca, François, De Jong, Danielle, Bieller, Annette, Hemmrich, Georg, Augustin, Rene, Hayward, David C., Ball, Eldon E., Bosch, Thomas C.G., Agata, Kiyokazu, Hassel, Monika, and Miller, David J. (2011) Phylogenomics reveals an anomalous distribution of USP genes in metazoans. Molecular Biology and Evolution, 28 (1). pp. 153-161.

Wang, Jie, Niu, Cuijuan, Huang, Chenxi, Rummer, Jodie L., and Xie, Zhigang (2011) Compensatory growth in juvenile freshwater turtles, Chinemys reevesii, following feed deprivation. Journal of the World Aquaculture Society, 42 (1). pp. 82-89.

Thaenkham, Urusa, Nawa, Yukifumi, Blair, David, and Pakdee, Wallop (2011) Confirmation of the paraphyletic relationship between families Opisthorchiidae and Heterophyidae using small and large subunit ribosomal DNA sequences. Parasitology International, 60 (4). pp. 521-523.

Melville, J., Ritchie, E.G., Chapple, S.N.J., Glor, R.E., and Schulte II, J.A. (2011) Evolutionary origins and diversification of dragon lizards in Australia's tropical savannas. Molecular Phylogenetics and Evolution, 58 (2). pp. 257-270.

Rummer, Jodie L., and Brauner, Colin J. (2011) Plasma-accessible carbonic anhydrase at the tissue of a teleost fish may greatly enhance oxygen delivery: in vitro evidence in rainbow trout, Oncorhynchus mykiss. Journal of Experimental Biology, 214. pp. 2319-2328.

Garland, Stephen, James, Timothy Y. , Blair, David, Berger, Lee, and Skerratt, Lee F. (2011) Polymorphic repetitive loci of the amphibian pathogen Batrachochytrium dendrobatidis. Diseases of Aquatic Organisms, 97 (1). pp. 1-9.

Strugnell, J.M., Cherel, Y., Cooke, I.R., Gleadall, I.G., Hochberg, F.G, Ibáñez, I.G., Jorgensen, E., Laptikhovsky, V.V., Linse, K., Norman, M., Vecchione, M., Voight, J.R., and Allcock, A.L. (2011) The Southern Ocean: source and sink? Deep-Sea Research Part II: topical studies in oceanography, 58 (1-2). pp. 196-204.

Le, T.H., Sato, Y., De , N., Nga, N., Nhung, N., Vu, T.T., Sithithaworn, P., McManus, D.P., Agatsuma, T., and Blair, D. (2011) Updated phylogenetic scheme based on the complete mitochondrial protein-coding sequence for common parasitic flatworms. Tropical Medicine and International Health, 16 (S1). 1.3-180. p. 222.

Allcock, A. Louise, Cooke, Ira R., and Strugnell, Jan M. (2011) What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda? Zoological Journal of the Linnean Society, 161 (3). pp. 573-586.

Rummer, Jodie L. (2010) Is it cheaper to "grow up" fast? Journal of Experimental Biology, 213 (23). iv-iv.

Harrington, Mark G., and Gadek, Paul A. (2010) Phylogenetics of Hopbushes and Pepperflowers (Dodonaea, Diplopeltis – Sapindaceae) based on nuclear ribosomal ITS and partial ETS sequences incorporating secondary structure models. Australian Systematic Botany, 23 (6). pp. 431-442.

Rummer, Jodie L. (2010) How woolly mammoth blood cheated the cold. Journal of Experimental Biology, 213 (15). v-v.

Kitahara, Marcelo V., Cairns, Stephen D., Stolarski, Jaroslaw, Blair, David, and Miller, David J. (2010) A comprehensive phylogenetic analysis of the Scleractinia (Cnidaria, Anthozoa) based on mitochondrial CO1 sequence data. PLoS ONE, 5 (7). e11490. pp. 1-9.

Karns, Daryl R., Lukoschek, Vimoksalehi, Osterhage, Jennifer, Murphy, John C., and Voris, Harold K. (2010) Phylogeny and biogeography of the Enhydris clade (Serpentes: Homalopsidae). Zootaxa, 2452. pp. 18-30.

Rummer, Jodie L. (2010) Ion regulation drives gill development. Journal of Experimental Biology, 213 (9). iv-iv.

Rummer, Jodie L., Roshan-Moniri , Mani, Balfry, Shannon K., and Brauner, Colin J. (2010) Use it or lose it? Sablefish, Anoplopoma fimbria, a species representing a fifth teleostean group where the βNHE associated with the red blood cell adrenergic stress response has been secondarily lost. Journal of Experimental Biology, 213 (9). pp. 1503-1512.

Rummer, Jodie L. (2010) Brrrown adipose tissue: special fat for cold critters. Journal of Experimental Biology, 213 (4). vi-vi.

Clark, Timothy Darren, Rummer, J.L., Sepulveda, C.A., Farrell, A.P., and Brauner, C.J. (2010) Reduced and reversed temperature dependence of blood oxygenation in an ectothermic scombrid fish: implications for the evolution of regional heterothermy? Journal of Comparative Physiology B: Biochemical Systemic and Environmental Physiology, 180. pp. 73-82.

Rummer, Jodie L. (2009) Komodo dragon's "pearly whites" pack a 1-2-3 deadly punch. Journal of Experimental Biology, 212 (21). iv-iv.

Rummer, Jodie L. (2009) The real taste of victory. Journal of Experimental Biology, 212 (15). iv-iv.

Goodman, B.A. (2009) Nowhere to run: the role of habitat openness and refuge use in defining patterns of morphological and performance evolution in tropical lizards. Journal of Evolutionary Biology, 22 (7). pp. 1535-1544.

Hoskin, C.J., James, S., and Grigg, G.C. (2009) Ecology and taxonomy-driven deviations in the frog call-body size relationship across the diverse Australian frog fauna. Journal of Zoology, 278 (1). pp. 36-41.

Rummer, Jodie L. (2009) A little stress for a fetus goes a long way. Journal of Experimental Biology, 212 (4). v-v.

Van de Putte, Anton Pieter, Van Houdt, J.K.J., Maes, G.E., Janko, K., Koubbi, P., Rock, J., and Volckaert, F.A.M. (2009) Species identification in the trematomid family using nuclear genetic markers. Polar Biology, 32 (12). pp. 1731-1741.

Strugnell, Jan M., Rogers, Alex D., Prodöhl, Paulo A., Collins, Martin A., and Allcock, A. Louise (2008) The thermohaline expressway: the Southern Ocean as a centre of origin for deep-sea octopuses. Cladistics, 24 (6). pp. 853-860.

Niu, C.J., Rummer, J.L., Brauner, C.J., and Schulte, P.M. (2008) Heat shock protein (Hsp70) induced by a mild heat shock slightly moderates plasma osmolarity increases upon salinity transfer in rainbow trout (Oncorhynchus mykiss). Comparative Biochemistry and Physiology Part C: toxicology & pharmacology, 148 (4). pp. 437-444.

Harold, Antony S., Winterbottom, Richard, Munday, Philip L., and Chapman, Robert W. (2008) Phylogenetic relationships of Indo-Pacific coral gobies of the genus Gobiodon (Teleostei: Gobiidae) based on morphological and molecular data. Bulletin of Marine Science, 82 (1). pp. 119-136.

Grasso, Lauretta, Maindonald, John, Rudd, Stephen, Hayward, David C., Saint, Robert, Miller, David J., and Ball, Eldon E. (2008) Microarray analysis identifies candidate genes for key roles in coral development. BMC Genomics, 9. pp. 540-557.

Anseeuw, Dieter, Maes, Gregory E., Busselen, Paul, Knapen, Dries, Snoeks, Jos, and Verheyen, Erik (2008) Subtle population structure and male-biased dispersal in two Copadichromis species (Teleostei, Cichlidae) from Lake Malawi, East Africa. Hydrobiologia, 615 (1). pp. 69-79.

Butcher, Ryonen, Byrne, Margaret, and Crayn, Darren M. (2007) Evidence for convergent evolution among phylogenetically distant rare species of Tetratheca (Elaeocarpaceae, formerly Tremandraceae) from Western Australia. Australian Systematic Botany, 20 (2). pp. 126-138.

Margulies, Elliot H., Cooper, Gregory M., Asimenos, George, Thomas, Daryl J., Dewey, Colin N., Siepel, Adam, Birney, Ewan, Keefe, Damian, Schwartz, Ariel S., Hou, Minmei, Taylor, James, Nikolaev, Sergey, Montoya-Burgos, Juan I., Löytynoja, Ari, Whelan, Simon, Pardi, Fabio, Massingham, Tim, Brown, James B., Bickel, Peter, Holmes, Ian, Mullikin, James C., Ureta-Vidal, Abel, Paten, Benedict, Stone, Eric A., Rosenbloom, Kate R., Kent, W. James, Bouffard, G.G., Guan, X., Hansen, N.F., Idol, J.R., Maduro, V.V.B., Maskeri, B., McDowell, J.C., Park, M., Thomas, P.J., Young, A.C., Blakesley, R.W., Muzny, D.M., Sodergren, E., Wheeler, D.A., Worley, K.C., Jiang, H., Weinstock, G.M., Gibbs, R.A., Graves, T., Fulton, R., Mardis, E.R., Wilson, R.K., Clamp, M., Cuff, J., Gnerre, S., Jaffe, D.B., Chang, J.L., Lindblad-Toh, K., Lander, E.S., Hinrichs, A., Trumbower, H., Clawson, H., Zweig, A., Kuhn, R.M., Barber, G., Harte, R., Karolchik, D., Field, Matt, Moore, R.A., Matthewson, C.A., Schein, J.E., Marra, M.A., Antonarakis, Stylianos E., Batzoglou, Serafim, Goldman, Nick, Hardison, Ross, Haussler, David, Miller, Webb, Pachter, Lior, Green, Eric D., and Sidow, Arend (2007) Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome. Genome Research, 17 (6). pp. 760-774.

Crayn, Darren M., Rossetto, Maurizio, and Maynard, David J. (2006) Molecular phylogeny and dating reveals an Oligo-Miocene radiation of dry-adapted shrubs (Tremandraceae) from rainforest tree progenitors (Elaeocarpaceae) in Australia. American Journal of Botany, 93 (9). pp. 1328-1342.

Caldwell, Susan, Rummer, Jodie L., and Brauner, Colin J. (2006) Blood sampling techniques and storage duration: Effects on the presence and magnitude of the red blood cell β-adrenergic response in rainbow trout (Oncorhynchus mykiss). Comparative Biochemistry and Physiology-Part A: molecular & integrative physiology, 144 (2). pp. 188-195.

Burns, Emma L., and Crayn, Darren M. (2006) Phylogenetics and evolution of bell frogs (Litoria aurea species-group, Anura: Hylidae) based on mitochondrial ND4 sequences. Molecular Phylogenetics and Evolution, 39 (2). pp. 573-579.

Baker, D., Rummer, J., Sardella, B., and Brauner, C. (2006) Acid-base regulation during exposure to elevated environmental CO₂ in an osmoconformer, the Pacific Hagfish (Eptatretus stoutii). Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 143 (Suppl 4). S74-S74.

Maes, G.E., Pujolar, J.M., Raeymaekers, J.A.M., Dannewitz, J., and Volckaert, F.A.M. (2006) Microsatellite conservation and Bayesian individual assignment in four Anguilla species. Marine Ecology Progress Series, 319. pp. 251-261.

Rummer, Jodie, and Bennett, Wayne A. (2005) Physiological effects of swim bladder overexpansion and catastrophic decompression on red snapper. Transactions of the American Fisheries Society, 134 (6). pp. 1457-1470.

Rogers, Matthew B., Archibald, John M., Field, Matthew A., Li, Catherine, Striepen, Boris, and Keeling, Patrick J. (2004) Plastid-targeting peptides from the Chlorarachniophyte Bigelowiella natans. Journal of Eukaryotic Microbiology, 51 (5). pp. 529-535.

Richards, Zoe T., and Wallace, Carden (2004) Acropora rongelapensis sp. nov., a new species of Acropora from the Marshall Islands (Scleractinia: Astrocoeniina: Acroporidae). Zootaxa, 590. pp. 1-5.

Walton, S.F., Dougall, A., Pizzutto, S., Holt, D., Taplin, D., Arlian, L.G., Morgan, M., Currie, B.J., and Kemp, D.J. (2004) Genetic epidemiology of Sarcoptes scabiei (Acari: Sarcoptidae) in northern Australia. International Journal for Parasitology, 34 (7). pp. 839-849.

Hoskin, Conrad J. (2004) Australian microhylid frogs (Cophixalus and Austrochaperina): phylogeny, taxonomy, calls, distributions and breeding biology. Australian Journal of Zoology, 52 (3). pp. 237-269.

Hoskin, C.J., Couper, P.J., and Schneider, C.J. (2003) A new species of Phyllurus (Lacertilia: Gekkonidae) and a revised phylogeny and key for the Australian leaf-tailed geckos. Australian Journal of Zoology, 51 (2). pp. 153-164.

Bosch, J., and Boyero, L. (2003) Precopulatory behaviour and the evolutionary relationships of Discoglossidae. Journal of Zoological Systematics and Evolutionary Research, 41 (3). pp. 145-151.

Pérez-Barbería, F.J., and Gordon, I.J. (2001) Relationships between oral morphology and feeding style in the Ungulata: a phylogenetically controlled evaluation. Proceedings of the Royal Society of London Series B, Biological Sciences, 268 (1471). pp. 1023-1032.

Mysterud, Atle, Pérez-Barbería, F. Javier, and Gordon, Iain. J. (2001) The effect of season, sex and feeding style on home range area versus body mass scaling in temperate ruminants. Oecologia, 127 (1). pp. 30-39.

Kokubugata, G., Kondo, K., Wilson, G.W., Randall, L.M., van der Schans, A., and Morris, D.K. (2000) Comparison of karyotype and rDNA-distribution in somatic chromosomes of Bowenia species (Stangeriaceae, Cycadales). Australian Systematic Botany, 13 (1). pp. 15-20.

Pérez-Barbería, F. Javier, and Gordon, Iain J. (1999) The relative roles of phylogeny, body size and feeding style on the activity time of temperate ruminants: a reanalysis. Oecologia, 120 (2). pp. 193-197.

Duke, Norman C., Benzie, John A.H., Goodall, John A., and Ballment, Elizabeth R. (1998) Genetic structure and evolution of species in the mangrove genus Avicennia (Avicenniaceae) in the Indo-West Pacific. Evolution: international journal of organic evolution, 52 (6). pp. 1612-1626.

Crampton, Andrea L., Miller, Catherine, Baxter, Glenn D., and Barker, Stephen C. (1998) Expressed sequenced tags and new genes from the cattle tick, Boophilus microplus. Experimental and Applied Acarology, 22 (3). pp. 177-186.

Van Herwerden, L., Blair, D., and Agatsuma, T. (1998) Intra- and inter-specific variation in nuclear ribosomal internal transcribed spacer 1 of the Schistosoma japonicum species complex. Parasitology, 116 (4). pp. 311-317.

Barton, Diane (1994) Three species of the genus Dolichosaccus Johnston, 1912 (Digenea: Telorchiidae) from the introduced toad Bufo marinus (Amphibia: Bufonidae) in Australia, with the erection of Meditypus n. subg. Systematic Parasitology, 29 (2). pp. 121-131.

Cribb, Thomas H., and Barton, Diane P. (1991) Zeylanurotrema spearei sp.n. (Digenea: Brachylaimidae) from the cane toad, Bufo marinus, in Australia. Zoologica Scripta, 20 (3). pp. 207-213.

Pettigrew, J.D., Jamieson, B.G.M., Robson, S.K., Hall, L.S., McNally, K.I., and Cooper, H.M. (1989) Phylogenetic relations between microbats, megabats and primates (Mammalia: Chiroptera and Primates). Philosophical Transactions of the Royal Society B: Biological Sciences, 325 (1229). pp. 489-559.

Book Chapter

Choat, J.H., Russell, B.C., and Chin, A. (2019) The fish assemblages of the Great Barrier Reef: their diversity and origin. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO, Melbourne, VIC, Australia, pp. 389-406.

Rummer, Jodie L. (2007) Factors affecting catch and release (CAR) mortality in fish: insight into CAR mortality in red snapper and the influence of catastrophic decompression. In: Patterson, William F., Cowan, James H., Fitzhugh, Gary R., and Nieland, David L., (eds.) Red Snapper: ecology and fisheries in the U.S. Gulf of Mexico. Symposium (60). American Fisheries Society, Bethesda, MD, USA, pp. 123-144.

Conference Item

Schlüns, Ellen, Robson, Simon KA, and Crozier, Ross (2009) Metapleural gland evolution in formicine ants (Formicidae: Hymenoptera). In: Australian Entomological Society’s 40th AGM & Scientific Conference / Society of Australian Systematic Biologists / 9th Invertebrate Biodiversity & Conservation Conference. p. 108. From: Australian Entomological Society’s 40th AGM & Scientific Conference / Society of Australian Systematic Biologists / 9th Invertebrate Biodiversity & Conservation Conference, 25-28 SEP 2009. (Unpublished)

Thesis

Lin, Mei-Fang (2016) Corallimorpharian transcriptomes and their use to understand phylogeny and symbiosis in the Hexacorallia. PhD thesis, James Cook University.

Hodge, Jennifer Reneé (2014) Biogeography and the evolution of coral reef fish species. PhD thesis, James Cook University.

Lema, Anaïs Kimberley (2014) Diversity, stability, and uptake of diazotrophic bacterial communities associated with corals of the Great Barrier Reef. PhD thesis, James Cook University.

Huerlimann, Roger Stephan (2014) Microalgal lipid biosynthesis: phylogeny of acetyl-CoA carboxylase and gene expression patterns of key enzymes. PhD thesis, James Cook University.

Ma, Ka Yan (2014) Patterns and processes of diversification in groupers (family: Epinephelidae). PhD thesis, James Cook University.

Davis, Aaron Marshall (2012) Dietary ecology of terapontid grunters (Pisces: Terapontidae) with particular reference to ontogeny and phylogeny. PhD thesis, James Cook University.

Cowman, Peter Francis (2011) Dating the evolutionary origins of coral reef fishes. PhD thesis, James Cook University.

Kerr, Sarah Emily (2011) Divergence of a mammal along a habitat gradient: a study of the coppery brushtail possum, Trichosurus vulpecula johnsonii. PhD thesis, James Cook University.

Schlüns, Ellen Antje (2011) Molecular ecology and phylogenetics in formicine ants. PhD thesis, James Cook University.

Heatwole, Harold (2010) Distribution and geographic variation of sea kraits in the Laticauda colubrina complex (Serpentes, Elapidae, Laticaudinae). PhD thesis, James Cook University.

Harrington, Mark (2008) Phylogeny and evolutionary history of Sapindaceae and Dodonaea. PhD thesis, James Cook University.

Chong, Caroline (2008) A riparian perspective on species ecology and evolution: Melaleuca leucadendra (Myrtaceae). PhD thesis, James Cook University.

Klanten, Selma O. (2003) Molecular phylogeny, temporal patterns of lineage diversification and phylogeography of the surgeonfish genus Naso (Acanthuridae). PhD thesis, James Cook University.

Christidis, Faye (2003) Systematics, phylogeny and ecology of Australian Leptophlebiidae (Ephemeroptera). PhD thesis, James Cook University.

Raffiudin, Rika (2002) Honey bee behavioural evolution and itpr gene structure studies. PhD thesis, James Cook University.

Arango, Claudia Patricia (2002) Morphological and molecular phylogenetic analysis of the sea spiders (Arthropoda, Pycnogonida) and taxonomic study of tropical Australian forms. PhD thesis, James Cook University.

van Herwerden, Lynne (1998) The trematode genera Paragonimus and Schistosoma in East Asia: molecular evolution, phylogeny and biogeography. PhD thesis, James Cook University.

Scott, Bronwen (1996) Systematics, phylogeny and biogeography of the larger camaenid land snails of eastern Queensland rainforests: (Pulmonata: Stylommatophora: Camaenidae). PhD thesis, James Cook University of North Queensland.

This list was generated on Wed Sep 22 22:50:35 2021 AEST.