A

Asad, Habat Ullah (2017) Improving mango breeding efficiency through improved pollen storage, fruit retention and understanding of the heritability of quantitative tree architectural traits. PhD thesis, James Cook University.

Alderslade, Philip Norman (1995) Taxonomic studies within the gorgonian family Isididae (Coelenterata: Octocorallia). PhD thesis, James Cook University.

B

Baker, C.S., Lukoschek, V., Lavery, S., Dalebout, M.L., Yong-Un, M., Endo, T., and Funahashi, N. (2006) Incomplete reporting of whale, dolphin and porpoise ‘bycatch’ revealed by molecular monitoring of Korean markets. Animal Conservation, 9 (4). pp. 474-482.

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Bastidas, Ana Carolina (2002) Population dynamics and genetic structure of locally dominant species on coral reefs: a case study of the soft corals Sinularia flexibilis and Clavularia koellikeri. PhD thesis, James Cook University.

Blair, D., Le , T.H., Després, L., and McManus, D.P. (1999) Mitochondrial genes of Schistosoma mansoni. Parasitology, 119 (3). pp. 303-313.

Barnard, R., Futo, V., Pecheniuk, N., Slattery, M., and Walsh, T. (1998) PCR bias toward the wild-type k-ras and p53 sequences: implications for PCR detection of mutations and cancer diagnosis. BioTechniques, 25 (4). pp. 684-691.

C

Capper, Roxana L., Jin, Young K., Lundgren, Petra B., Peplow, Lesa M., Matz, Mikhail V., and van Oppen, Madeleine J.H. (2015) Quantitative high resolution melting: two methods to determine SNP allele frequencies from pooled samples. BMC Genetics, 16. 62. pp. 1-13.

Chen, Yi-zhi, Gao, Qing, Zhao, Zue-zhi, Chen, Ying-zhang, Bennett, Craig L., Xiong, Xi-shan, Mei, Chang-lin , Shi, Yong-quan, and Chen, Xiang-mei (2010) Systematic review of TCF2 anomalies in renal cysts and diabetes syndrome/maturity onset diabetes of the young type 5. Chinese Medical Journal, 123 (22). pp. 3326-3333.

Chen, Ming-gang, Chang, Zheng-shan, Cui, Ai-li, Blair, David, Zhang, Yong-nian, Chen, Shao-hong, and Feng, Zheng (2004) DNA sequences of Paragonimus skrjabini populations from five provinces in China. Chinese Medical Journal, 117 (2). pp. 219-224.

D

Dao, Hoc Tan (2016) Recruitment and genetic population genetics of spiny lobsters, Panulirus ornatus and P. homarus in the south-east Asian archipelago. PhD thesis, James Cook University.

Doyle, Stephen R., Griffith, Ian S., Murphy, Nick P., and Strugnell, Jan M. (2015) Low-coverage MiSeq next generation sequencing reveals the mitochondrial genome of the eastern rock lobster, Sagmariasus verreauxi. Mitochondrial DNA Part A: DNA mapping, sequencing and analysis, 26 (6). pp. 844-845.

Domingos, Jose A., Smith-Keune, Carolyn, Robinson, Nicholas, Loughnan, Shannon, Harrison, Paul, and Jerry, Dean R. (2013) Heritability of harvest growth traits and genotype–environment interactions in barramundi, Lates calcarifer (Bloch). Aquaculture, 402-403. pp. 66-75.

E

Emblem, Ase, Karlsen, Bard Ove, Evertsen, Jussi, Miller, David J., Moum, Truls, and Johansen, Steinar D. (2012) Mitogenome polymorphism in a single branch sample revealed by SOLiD deep sequencing of the Lophelia pertusa coral genome. Gene, 506 (2). pp. 344-349.

G

Gao, Zhengquan, Li, Yan, Wu, Guanxun, Li, Guoqiang, Sun, Haifeng, Deng, Suzhen, Shen, Yicheng, Chen, Guoqiang, Zhang, Ruihao, Meng, Chunxiao, and Zhang, Xiaowen (2015) Transcriptome analysis in Haematococcus pluvialis: astaxanthin induction by Salicylic Acid (SA) and Jasmonic Acid (JA). PLoS ONE, 10 (10). pp. 1-14.

Gao, Zhengquan, Meng, Chunxiao, Gao, Hongzheng, Li, Yan, Zhang, Xiaowen, Xu, Dong, Zhou, Shitan, Liu, Banghui, Su, Yuanfeng, and Ye, Naihao (2013) Carotenoid genes transcriptional regulation for astaxanthin accumulation in fresh water unicellular alga Haematococcus pluvialis by gibberellin A3 (GA3). Indian Journal of Biochemistry and Biophysics, 50 (6). pp. 548-553.

Gasser, Robin B., Cantacessi, Cinzia, and Campbell, Bronwyn E. (2009) Improved molecular-diagnostic tools for human hookworms. Expert Review of Molecular Diagnostics, 9 (1 ). pp. 17-21.

H

Huang, Boyen, Takahashi, Katsu, Goto, Tomoko, Kiso, Honoka, Sugai, Manabu, Shimizu, Akira, Kosugi, Shinji, and Bessho, Kazuhisa (2015) ANKH polymorphisms and clicking of the temporomandibular joint in dental residents. Journal of Maxillofacial and Oral Surgery, 14 (2). pp. 247-251.

Hulin-Curtis, Sarah L., Petit, Dominique, Figg, W. Douglas, Hsing, Ann W., and Reichardt, Juergen K.V. (2010) Finasteride metabolism and pharmacogenetics: new approaches to personalized prevention of prostate cancer. Future oncology, 6 (12). pp. 1897-1913.

Haynes, Gwilym D., Gongora, Jaime, Nicholas, Frank W., and Zenger, Kyall R. (2009) Rapid identification of maternal lineages in common carp (Cyprinus carpio L.) using real-time PCR and high resolution melt-curve analysis. Aquaculture, 287 (1-2). pp. 59-66.

J

Jones, David B., Jerry, Dean R., Forêt, Sylvain, Konovalov, Dmitry A., and Zenger, Kyall R. (2013) Genome-wide SNP validation and mantle tissue transcriptome analysis in the silver-lipped pearl oyster, Pinctada maxima. Marine Biotechnology, 15 (6). pp. 647-658.

K

Kashani, Arash, Holman, Benjamin William Behrens, and Malau-Aduli, Aduli Enoch Othniel (2017) Single nucleotide polymorphisms of the ovine ADRB3 gene in crossbred Australian sheep supplemented with spirulina (Arthrospira platensis) cyanobacterial microalgae. Biomedical Journal of Scientific and Technical Research, 1 (2).

Kitahara, Marcelo V., Lin, Mei-Fang, Forêt, Sylvain, Huttley, Gavin, Miller, David J., and Chen, Chaolun Allen (2014) The "naked coral" hypothesis revisited: evidence for and against Scleractinian monophyly. PLoS One, 9 (4). e94774. pp. 1-13.

Kitahara, Marcelo V., Cairns, Stephen D., and Miller, David J. (2010) Monophyletic origin of Caryophyllia (Scleractinia, Caryophylliidae), with descriptions of six new species. Systematics and Biodiversity, 8 (1). pp. 91-118.

Kokubugata, G., Kondo, K., Wilson, G.W., Randall, L.M., van der Schans, A., and Morris, D.K. (2000) Comparison of karyotype and rDNA-distribution in somatic chromosomes of Bowenia species (Stangeriaceae, Cycadales). Australian Systematic Botany, 13 (1). pp. 15-20.

L

Lin, Mei-Fang, Kitahara, Marcelo Visentini, Luo, Haiwei, Tracey, Dianne, Geller, Jonathan, Fukami, Hironobu, Miller, David John, and Chen, Chaolun Allen (2014) Mitochondrial genome rearrangements in the Scleractinia/Corallimorpharia complex: implications for coral phylogeny. Genome Biology and Evolution, 6 (5). pp. 1086-1095.

Latrofa, Maria S., Dantas-Torres, Filipe, Annoscia, Giada, Cantacessi, Cinzia, and Otranto, Domenico (2013) Comparative analyses of mitochondrial and nuclear genetic markers for the molecular identification of Rhipicephalus spp. Infection, Genetics and Evolution, 20. pp. 422-427.

Loughnan, Shannon R., Domingos, Jose A., Smith-Keune, Carolyn, Forrester, Justin P., Jerry, Dean R., Beheregaray, Luciano B., and Robinson, Nicholas A. (2013) Broodstock contribution after mass spawning and size grading in barramundi (Lates calcarifer, Bloch). Aquaculture, 404-405. pp. 139-149.

Lukoschek, Vimoksalehi, and Avise, John C. (2012) Development of eleven polymorphic microsatellite loci for the sea snake Emydocephalus annulatus (Elapidae: Hydrophiinae) and cross-species amplification for seven species in the sister genus Aipysurus. Conservation Genetics Resources, 4 (1). pp. 11-14.

Lin, Mei-Fang, Kitahara, Marcelo Visentini, Tachikawa, Hiroyuki, Fukami, Hironobu, Miller, David John, and Chen, Chaolun Allen (2012) Novel organization of the mitochondrial genome in the deep-sea coral, Madrepora oculata (Hexacorallia, Scleractinia, Oculinidae) and its taxonomic implications. Molecular Phylogenetics and Evolution, 65 (1). pp. 323-328.

Lukoschek, Vimoksalehi, and Avise, John C. (2011) Development of ten polymorphic microsatellite loci for the sea snake Hydrophis elegans (Elapidae: Hydrophiinae) and cross-species amplification for fifteen marine hydrophiine species. Conservation Genetics Resources, 3 (3). pp. 497-501.

Lukoschek, V., Funahashi, N., Lavery, S., Dalebout, M.L., Cipriano, F., and Baker, C.S. (2009) High proportion of protected minke whales sold on Japanese markets due to illegal, unreported or unregulated exploitation. Animal Conservation, 12 (5). pp. 385-395.

Lukoschek, V., Waycott, M., and Marsh, H. (2007) Phylogeography of the olive sea snake, Aipysurus laevis (Hydrophiinae) indicates Pleistocene range expansion around northern Australia but low contemporary gene flow. Molecular Ecology, 16 (16). pp. 3406-3422.

Lukoschek, V., Heatwole, H., Grech, A., Burns, G., and Marsh, H. (2007) Distribution of two species of sea snakes, Aipysurus laevis and Emydocephalus annulatus, in the southern Great Barrier Reef: metapopulation dynamics, marine protected areas and conservation. Coral Reefs, 26 (2). pp. 291-307.

M

Malau-Aduli, A.E.O., and Deng Akuoch, Daniel Jurkuch (2010) Wool comfort factor variation in Australian crossbred sheep. Journal of Animal Science, 88 (E-Suppl 2). 1102. p. 860.

Malau-Aduli, A.E.O., and Holman, B. (2010) Genetics-nutrition interactions influencing wool spinning fineness in Australian crossbred sheep. Journal of Animal Science, 88 (E-Suppl 2). 431. pp. 469-470.

Malau-Aduli, A.E.O., Walker, R.E., and Bignell, C.W. (2009) Prediction of wool fibre diameter from protein and metabolisable energy digestibility coefficients in crossbred sheep. Journal of Animal Science, 87 (E-Suppl 2). 519. p. 498.

N

Nguyen, Thuy T.T., Davy, F. Brian, Rimmer, Michael A., and De Silva, Sena S. (2009) Use and exchange of genetic resources of emerging species for aquaculture and other purposes. Reviews in Aquaculture, 1 (3-4). pp. 260-274.

P

Pearson, Mark S., Tribolet, Leon, Cantacessi, Cinzia, Periago, Maria Victoria, Adela Valerio, Maria, Jariwala, Amar R., Hotez, Peter, Diemert, David, Loukas, Alex, and Bethony, Jeffrey (2012) Molecular mechanisms of hookworm disease: stealth, virulence, and vaccines. Journal of Allergy and Clinical Immunology, 130 (1). pp. 13-21.

Plaza, Serge, de Jong, Danielle M., Gehring, Walter J., and Miller, David J. (2003) DNA-binding characteristics of cnidarian Pax-C and Pax-B proteins in vivo and in vitro: no simple relationship with the Pax-6 and Pax-2/5/8 classes. Journal of Experimental Zoology Part B: molecular and developmental evolution, 299B (1). pp. 26-35.

Pecheniuk, N. M., Morris, C. P., Walsh, T. P., and Marsh, N. A. (2001) The factor V HR2 haplotype: prevalence and association of the A4070G and A6755G polymorphisms. Blood Coagulation and Fibrinolysis, 12 (3). pp. 201-206.

Pecheniuk, N. M., Walsh, T. P., and Marsh, N. A. (2000) DNA technology for the detection of common genetic variants that predispose to thrombophilia. Blood Coagulation and Fibrinolysis, 11 (8). pp. 683-7000.

Painter, J.N., Crozier, R.H., Poiani, A., Robertson, R.J., and Clarke, M.F. (2000) Complex social organization reflects genetic structure and relatedness in the cooperatively breeding bell miner, Manorina melanophrys. Molecular Ecology, 9 (9). pp. 1339-1347.

Pecheniuk, Natalie M, Marsh, Neville A, and Walsh, Terence P (2000) Multiple analysis of three common genetic alterations associated with thrombophilia. Blood Coagulation and Fibrinolysis, 11. pp. 183-189.

Q

Qian, Zeng-Qiang, Crozier, Y. Ching, Schlick-Steiner, Birgit C., Steiner, Florian M., and Crozier, Ross H. (2009) Characterization of expressed sequence tag (EST)-derived microsatellite loci in the fire ant Solenopsis invicta (Hymenoptera: Formicidae). Conservation Genetics, 10 (5). pp. 1373-1376.

R

Rueger, Theresa (2016) Social relationships in a small habitat-dependent coral reef fish: an ecological, behavioural and genetic analysis. PhD thesis, James Cook University.

Richards, Zoe T., Wallace, Carden C., and Miller, David J. (2010) Archetypal elkhorn coral discovered in the Pacific Ocean. Systematics and Biodiversity, 8 (2). pp. 281-288.

S

Schrodt, Franziska, Domingues, Thomas F., Feldpausch, Ted, Saiz, Gustavo, Quesada, Carlos Alberto, Schwarze, Michael, Ishida, F. Yoko, Compaore, Halidou, Diallo, Adamo, Djagbletey, Gloria, Hien, Fidele, Sonké, Bonaventure, Toedoumg, Herman, Zapfack, Loius, Hiernaux, Pierre, Mougin, Eric, Bird, Michael I., Grace, John, Lewis, Simon L., Veenendaal, Elmar M., and Lloyd, Jon (2015) Foliar trait contrasts between African forest and savanna trees: genetic versus environmental effects. Functional Plant Biology, 42 (1). pp. 63-83.

Sakamaki, Kazuhiro, Shimizu, Kouhei, Iwata, Hiroaki, Imai, Kenichiro, Satou, Yutaka, Funayama, Noriko, Nozaki, Masami, Yajima, Mamiko, Nishimura, Osamu, Higuchi, Mayura, Chiba, Kumiko, Yoshimoto, Michi, Kimura, Haruna, Gracey, Andrew Y., Shimizu, Takashi, Tomii, Kentaro, Gotoh, Osamu, Akasaka, Koji, Sawasaki, Tatsuya, and Miller, David J. (2014) The apoptotic initiator Caspase-8: its functional ubiquity and genetic diversity during animal evolution. Molecular Biology and Evolution, 31 (12). pp. 3282-3301.

Smith-Keune, Carolyn, and Jerry, Dean R. (2009) High levels of intra-specific variation in the NG repeat region of the Pinctada maxima N66 organic matrix protein. Aquaculture Research, 40 (9). pp. 1054-1063.

Spielman, Derek, Brook, Barry W., and Frankham, Richard (2004) Most species are not driven to extinction before genetic factors impact them. National Academy of Sciences. Proceedings, 101 (42). pp. 15261-15264.

Smith, C., Benzie, J.A.H, and Wilson, K.J. (2003) Isolation and characterization of eight microsatellite loci from silver-lipped pearl oyster Pinctada maxima. Molecular Ecology Notes, 3 (1). pp. 125-127.

Suzuki, Shoichi, Murai, Nobuhiko, Burnell, James N., and Arai, Masao (2000) Changes in photosynthetic carbon flow in transgenic rice plants that express C4-type phosphoenolpyruvate carboxykinase from Urochloa panicoides. Plant Physiology, 124. pp. 163-172.

Sanetra, Matthias, and Crozier, Ross H. (2000) Characterization of microsatellite loci in the primitive ant Nothomyrmecia macrops Clark. Molecular Ecology, 9 (12). pp. 2169-2170.

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T

Trujillo-González, Alejandro (2018) Parasite threats from the ornamental fish trade. PhD thesis, James Cook University.

Togo, Yumiko , Takahashi, Katsu, Saito, Kazuyuki, Kiso, Honoka, Huang, Boyen, Tsukamoto, Hiroko, Hyon, Suong-Hyu, and Bessho, Kazuhisa (2013) Aldehyded dextran and ε-poly(l-lysine) hydrogel as nonviral gene carrier. Stem Cells International, 2013. 634379. pp. 1-5.

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W

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Y

Yarmohammadi, M., Shabani, A., Pourkazemi, M., Soltanloo, H., Imanpour, M.R., Ramezanpour, S., Smith-Keune, C., and Jerry, D.R. (2013) Effects of starvation and re-feeding on compensatory growth performance, plasma metabolites and IGF-I gene expression of Persian sturgeon (Acipenser persicus, Borodin 1897). Iranian Journal of Fisheries Sciences, 12 (2). pp. 465-483.