Francis, Robin K., Tostevin, Genevieve, Barbasch, Tina, Branconi, Rebecca, Srinivasan, Maya, Jones, Geoffrey P., and Buston, Peter M. (2024) Positive spatial autocorrelation in three habitat quality indicators sets the stage for evolution of adaptive dispersal plasticity in a coral reef fish. Coral Reefs, 43. pp. 69-78.

Ceccarelli, Daniela M., Logan, Murray, Evans, Richard D., Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Sinclair-Taylor, Tane, Srinivasan, Maya, and Williamson, David H. (2024) Regional-scale disturbances drive long-term decline of inshore coral reef fish assemblages in the Great Barrier Reef Marine Park. Global Change Biology, 30 (10). 17506.

Rueger, Theresa, MacDonald, Chancey, Harrison, Hugo B., Gardiner, Naomi P., Jones, Geoffrey P., and Mills, Suzanne C. (2024) Strength of Sexual Selection and Sex Roles Vary between Social Groups in a Coral Reef Cardinalfish. American Naturalist, 204 (3).

Harrison, H.B., Drane, L., Cresswell, B.J., Evans, R.D., Galbraith, G.F., Srinivasan, M., Taylor, B.M., Williamson, D.H., and Jones, G.P. (2023) Ageing of juvenile coral grouper (Plectropomus maculatus) reveals year-round spawning and recruitment: implications for seasonal closures. Proceedings of the Royal Society of London Series B, Biological Sciences, 290. 20230584.

Cresswell, B.J., Galbraith, G.F., Harrison, H.B., McCormick, M.I., and Jones, G.P, (2023) Coral reef pinnacles act as ecological magnets for the abundance, diversity and biomass of predatory fishes. Marine Ecology Progress Series, 717. pp. 143-156.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Panero, Marta, Galbraith, G.F., Srinivasan, M., and Jones, G.P. (2023) Roles of depth, current speed, and benthic cover in shaping gorgonian assemblages at the Palm Islands (Great Barrier Reef). Coral Reefs, 42. pp. 1045-1057.

Galbraith, Gemma F., Cresswell, Benjamin J., McCormick, Mark I., and Jones, Geoffrey P. (2023) Strong hydrodynamic drivers of coral reef fish biodiversity on submerged pinnacle coral reefs. Limnology and Oceanography, 68 (11). pp. 2415-2430.

González-Murcia, Saúl, Ekins, Merrick, Bridge, Tom C.L., Battershill, Christopher N., and Jones, Geoffrey P. (2023) Substratum selection in coral reef sponges and their interactions with other benthic organisms. Coral Reefs, 42 (2). pp. 427-442.

Srinivasan, Maya, and Jones, Geoffrey P. (2022) Cohabitation and competition among anemonefishes: patterns and consequences. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes: Model Organisms for Marine Science. Taylor & Francis, Boca Raton, FL, USA, pp. 187-195.

Galbraith, Gemma F., Cresswell, Benjamin J., McCormick, Mark, Bridge, Thomas C., and Jones, Geoffrey P. (2022) Contrasting hydrodynamic regimes of submerged pinnacle and emergent coral reefs. PLoS ONE, 17 (8). e0273092.

González-Murcia, Saúl, Coppock, Amy G., Ekins, Merrick, Battershill, Christopher N., and Jones, Geoffrey P. (2022) Effects of exposure, depth and aspect on sponge communities on a coral reef. Marine Ecology Progress Series, 685. pp. 111-126.

Goldsworthy, Nisha C., Srinivasan, Maya, Smallhorn-West, Patrick, Cheah, Lit-Chien, Munday, Philip L., and Jones, Geoffrey P. (2022) Life-history constraints, short adult life span and reproductive strategies in coral reef gobies of the genus Trimma. Journal of Fish Biology, 101 (4). pp. 996-1007.

Fitzgerald, L.M., Harrison, H.B., Coker, D.J., Saenz-Agudelo, P., Srinivasan, M., Majoris, J.E., Bostrom Einarsson, L., Pujol, B., Bennett-Smith, M., Thorrold, S.R., Planes, S., Jones, G.P., and Berumen, M.L. (2022) Rank change and growth within social hierarchies of the orange clownfish, Amphiprion percula. Marine Biology, 169 (10). 128.

Jones, Geoffrey P., Srinivasan, Maya, Galbraith, Gemma F., Berumen, Michael L., and Planes, Serge (2022) Saving Nemo: Extinction Risk, Conservation Status, and Effective Management Strategies for Anemonefishes. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes. CRC Press, Boca Raton, FL, USA, pp. 285-298.

Coppock, Amy G., Kingsford, Michael J., Battershill, Christopher N., and Jones, Geoffrey P. (2022) Significance of fish–sponge interactions in coral reef ecosystems. Coral Reefs, 41. pp. 1285-1308.

Webber, K., Srinivasan, M., Coppock, A. G., and Jones, G. P. (2022) Spatial patterns in the cover and composition of macroalgal assemblages on fringing and nearshore coral reefs. Marine and Freshwater Research, 73 (11). pp. 1310-1322.

Doll, Peter C., Munday, Philip L., Bonin, Mary C., and Jones, Geoffrey P. (2021) Habitat specialisation and overlap in coral reef gobies of the genus Eviota (Teleostei: Gobiidae). Marine Ecology-Progress Series, 677. pp. 81-94.

Galbraith, G.F., Cresswell, B., McCormick, M.I., Bridge, T.C., and Jones, G.P. (2021) High diversity, abundance and distinct fish assemblages on submerged coral reef pinnacles compared to shallow emergent reefs. Coral Reefs, 40. pp. 335-354.

Ceccarelli, Daniela M., Davey, Kate, Jones, Geoffrey P., Harris, Peter, Matoto, Sione V., Raubani, Jason, and Fernandes, Leanne (2021) How to meet new global targets in the offshore realms: biophysical guidelines for offshore networks of no-take marine protected areas. Frontiers in Marine Science, 8. 634574.

Lavin, Charles P., Jones, Geoffrey P., Williamson, David H., and Harrison, Hugo B. (2021) Minimum size limits and the reproductive value of numerous, young, mature female fish. Proceedings of the Royal Society B: Biological Sciences, 288 (1946). 20202714.

Smallhorn-West, Patrick F., Gordon, Sophie E., Dempsey, Alexandra C., Purkis, Sam J., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Southgate, Paul C., Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2021) Tongan socio-environmental spatial layers for marine ecosystem management. Pacific Conservation Biology, 27 (1). pp. 86-92.

Smallhorn-West, Patrick, Gordon, Sophie, Stone, Karen, Ceccarelli, Daniela, Malimali, Siola'a, Halafihi, Tu'ikolongahau, Wyatt, Mathew, Bridge, Tom, Pressey, Robert, and Jones, Geoffrey (2020) Biophysical and anthropogenic influences on the status of Tonga's coral reefs and reef fish fishery. PLoS One, 15 (11). e0241146.

Gainsford, A., Jones, G.P., Gardner, M.G., and van Herwerden, L. (2020) Characterisation and cross-amplification of 42 microsatellite markers in two Amphiprion species (Pomacentridae) and a natural hybrid anemonefish to inform genetic structure within a hybrid zone. Molecular Biology Reports, 47 (2). pp. 1521-1525.

Smallhorn-West, Patrick F., Stone, Karen, Ceccarelli, Daniela M., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13. e12755.

Smallhorn-West, Patrick, Garvin, J.B., Slayback, D.A., DeCarlo, T.M., Gordon, S.E., Fitzgerald, S.H., Halafihi, T., Jones, G.P., and Bridge, T.C.L. (2020) Coral reef annihilation, persistence and recovery at Earth's youngest volcanic island. Coral Reefs, 39. pp. 529-536.

Coppock, Amy G., González-Murcia, Saúl O., Srinivasan, Maya, Gardiner, Naomi M., and Jones, Geoffrey P. (2020) Different responses of coral and rubble-dwelling coral reef damselfishes (Family: Pomacentridae) to chemosensory cues from coral reef microhabitats. Marine Biology, 167. 74.

Branconi, Rebecca, Barbasch, Tina A., Francis, Robin K., Srinivasan, Maya, Jones, Geoffrey P., and Buston, Peter M. (2020) Ecological and social constraints combine to promote evolution of non-breeding strategies in clownfish. Communications Biology, 3. 649.

Smallhorn-West, Patrick F., Sheehan, Jason, Malimali, Siola'a, Halafihi, Tuikolongahau, Bridge, Tom C.L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Incentivizing co-management for impact: mechanisms driving the successful national expansion of Tonga's Special Management Area program. Conservation Letters, 13 (6). e12742.

Jones, G.P., Barone, G., Sambrook, K., and Bonin, M.C. (2020) Isolation promotes abundance and species richness of fishes recruiting to coral reef patches. Marine Biology, 167. 167.

Smallhorn-West, Patrick, Sheehan, Jason, Rodriguez-Troncoso, Alma Paola, Malimali, Siola’a, Halafihi, Tuikolongahau, Aisea, Latu, Mailau, Sione, Le'ota, Amanda, Ceccarelli, Daniela, Stone, Karen, Pressey, Bob, and Jones, Geoffrey (2020) Kingdom of Tonga Special Management Area Report 2020. Report. Kingdom of Tonga, Nuku'alofa, Tonga.

Munday, Philip L., Dixson, Danielle, Welch, Megan J., Chivers, Douglas P., Domenici, Paolo, Grosell, Martin, Heuer, Rachael M., Jones, Geoffrey P., McCormick, Mark I., Meekan, Mark, Nilsson, Göran E., Ravasi, Timothy, and Watson, Sue-Ann (2020) Methods matter in repeating ocean acidification studies. Nature, 586. E20-E24.

Rueger, Theresa, Harrison, Hugo B., Buston, Peter M., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2020) Natal philopatry increases relatedness within groups of coral reef cardinalfish: Natal philopatry increases relatedness. Proceedings of the Royal Society of London Series B, Biological Sciences, 287 (1930). 20201133.

Gainsford, Ashton, Jones, Geoffrey P., Hobbs, Jean-Paul A., Heindler, Franz Maximilian, and van Herwerden, Lynne (2020) Species integrity, introgression, and genetic variation across a coral reef fish hybrid zone. Ecology and Evolution, 10 (21). pp. 11998-12014.

Salles, Océane C., Almany, Glenn R., Berumen, Michael L., Jones, Geoffrey P., Saenz-Agudelo, Pablo, Srinivasan, Maya, Thorrold, Simon R., Pujol, Benoit, and Planes, Serge (2020) Strong habitat and weak genetic effects shape the lifetime reproductive success in a wild clownfish population. Ecology Letters, 23 (2). pp. 265-273.

Barbasch, Tina A., Rueger, Theresa, Srinivasan, Maya, Wong, Marian Y.L., Jones, Geoffrey P., and Buston, Peter M. (2020) Substantial plasticity of reproduction and parental care in response to local resource availability in a wild clownfish population. Oikos, 129 (12). pp. 1844-1855.

Harrison, Hugo B., Bode, Michael, Williamson, David H., Berumen, Michael L., and Jones, Geoffrey P. (2020) A connectivity portfolio effect stabilizes marine reserve performance. Proceedings of the National Academy of Sciences, 117 (41). pp. 25595-25600.

Munday, Philip L, Dixson, Danielle L., Welch, Megan J., Chivers, Douglas P., Domenici, Paolo, Grosell, Martin, Heuer, Rachael M., Jones, Geoffrey P., McCormick, Mark I., Meekan, Mark, Nilsson, Göran E., Ravasi, Timothy, and Watson, Sue-Ann (2020) Additional material associated with the Matters Arising article published in Nature by Munday and colleagues. James Cook University, Townsville, QLD, Australia. (Unpublished)

MacDonald, Chancey, Bridge, Tom C.L., McMahon, Kelton W., and Jones, Geoffrey P. (2019) Alternative functional strategies and altered carbon pathways facilitate broad depth ranges in coral-obligate reef fishes. Functional Ecology, 33 (10). pp. 1962-1972.

Komyakova, Valeriya, Chamberlain, Dean, Jones, Geoffrey P., and Swearer, Stephen E. (2019) Assessing the performance of artificial reefs as substitute habitat for temperate reef fishes: implications for reef design and placement. Science of the Total Environment, 668. pp. 139-152.

Komyakova, V., Munday, P.L., and Jones, G.P. (2019) Comparative analysis of habitat use and ontogenetic habitat-shifts among coral reef damselfishes. Environmental Biology of Fishes, 102 (9). pp. 1201-1218.

Bellwood, David R., Pratchett, Morgan S., Morrison, Tiffany H., Gurney, Georgina G., Hughes, Terry P., Álvarez-Romero, Jorge G., Day, Jon C., Grantham, Ruby, Grech, Alana, Hoey, Andrew S., Jones, Geoffrey P., Pandolfi, John M., Tebbett, Sterling B., Techera, Erika, Weeks, Rebecca, and Cumming, Graeme S. (2019) Coral reef conservation in the Anthropocene: confronting spatial mismatches and prioritizing functions. Biological Conservation, 236. pp. 604-615.

Kingsford, M. J., Syms, C., Srinivasan, M., and Jones, G. P. (2019) Coral reef habitats and their influence on reef assemblages. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 51-62.

Rueger, Theresa, Harrison, Hugo B., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2019) Extra‐pair mating in a socially monogamous and paternal mouth‐brooding cardinalfish. Molecular Ecology, 28 (10). pp. 2625-2635.

Hopf, Jess K., Jones, Geoffrey P., Williamson, David H., and Connolly, Sean R. (2019) Marine reserves stabilize fish populations and fisheries yields in disturbed coral reef systems. Ecological Applications, 29 (5). e01905.

Giffin, Alyssa L., Rueger, Theresa, and Jones, Geoffrey P. (2019) Ontogenetic shifts in microhabitat use and coral selectivity in three coral reef fishes. Environmental Biology of Fishes, 102 (1). pp. 55-67.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Malimali, Siola'a, Pressey, Robert L., and Jones, Geoffrey P. (2019) Predicting impact to assess the efficacy of community-based marine reserve design. Conservation Letters, 12 (1). e12602.

Frisch, Ashley J., Hobbs, Jean-Paul A., Hansen, Scott T., Williamson, David H., Bonin, Mary C., Jones, Geoffrey P., and Rizzari, Justin R. (2019) Recovery potential of mutualistic anemone and anemonefish populations. Fisheries Research, 218. pp. 1-9.

Crosbie, Augustine J., Bridge, Tom C. L., Jones, Geoff, and Baird, Andrew H. (2019) Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology - Progress Series, 622. pp. 93-102.

Eurich, J.G., Matley, J.K., Baker, R., McCormick, M.I., and Jones, G.P. (2019) Stable isotope analysis reveals trophic diversity and partitioning in territorial damselfishes on a low-latitude coral reef. Marine Biology, 166 (2). 17.

Bode, Michael, Leis, Jeffrey M., Mason, Luciano B., Williamson, David H., Harrison, Hugo B., Choukroun, Severine, and Jones, Geoffrey P. (2019) Successful validation of a larval dispersal model using genetic parentage data. PLoS Biology, 17 (7). e3000380.

Eurich, Jacob G., Shomaker, Simone M., McCormick, Mark I., and Jones, Geoffrey P. (2018) Experimental evaluation of the effect of a territorial damselfish on foraging behaviour of roving herbivores on coral reefs. Journal of Experimental Marine Biology and Ecology, 506. pp. 155-162.

Eurich, J.G., McCormick, M.I., and Jones, G.P. (2018) Habitat selection and aggression as determinants of fine-scale partitioning of coral reef zones in a guild of territorial damselfishes. Marine Ecology Progress Series, 587. pp. 201-215.

Schiel, David R., Ayling, Tony, Kingsford, Michael J., Battershill, Christopher N., Choat, J. Howard, Andrew, Neil L., Clements, Kendall D., Ayling, Avril L., Leum, Linda L., Poynter, Mark, and Jones, Geoffrey P. (2018) Change in the rocky reef fish fauna of the iconic Poor Knights Islands Marine Reserve in north-eastern New Zealand over 4 decades. Marine and Freshwater Research, 69 (10). pp. 1496-1507.

MacDonald, Chancey, Tauati, Mele I., and Jones, Geoffrey P. (2018) Depth patterns in microhabitat versatility and selectivity in coral reef damselfishes. Marine Biology, 165 (8). 138.

Eurich, Jacob G., McCormick, Mark I., and Jones, Geoffrey P. (2018) Direct and indirect effects of interspecific competition in a highly partitioned guild of reef fishes. Ecosphere, 9 (8). e02389.

Bode, Michael, Williamson, David H., Harrison, Hugo B., Outram, Nick, and Jones, Geoffrey P. (2018) Estimating dispersal kernels using genetic parentage data. Methods in Ecology and Evolution, 9. pp. 490-501.

Chausson, Juliette, Srinivasan, Maya, and Jones, Geoffrey P. (2018) Host anemone size as a determinant of social group size and structure in the orange clownfish (Amphiprion percula). PeerJ, 6. e5841.

Dixson, Danielle L., and Jones, Geoffrey P. (2018) Influence of prior residents on settlement preferences in the anemonefish, Premnas biaculeatus. Coral Reefs, 37 (2). pp. 519-526.

Bostrom Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2018) Loss of live coral compromises predator-avoidance behaviour in coral reef damselfish. Scientific Reports, 8. 7795.

MacDonald, Chancey, Jones, Geoffrey P., and Bridge, Tom (2018) Marginal sinks or potential refuges? Costs and benefits for coral-obligate reef fishes at deep range margins. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1890). 20181545.

Rueger, T., Barbasch, T.A., Wong, M.Y.L., Srinivasan, M., Jones, G.P., and Buston, P.M. (2018) Reproductive control via the threat of eviction in the clown anemonefish. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1891). 20181295.

Krueck, Nils C., Legrand, Christelle, Ahmadia, Gabby N., Estradivari, Green, Alison, Jones, Geoffrey P., Riginos, Cynthia, Treml, Eric A., and Mumby, Peter J. (2018) Reserve sizes needed to protect coral reef fishes. Conservation Letters, 11 (3). e12415.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2018) Site fidelity facilitates pair formation in aggregations of coral reef cardinalfish. Oecologia, 186 (2). pp. 425-434.

Komyakova, Valeriya, Jones, Geoffrey P., and Munday, Philip L. (2018) Strong effects of coral species on the diversity and structure of reef fish communities: a multi-scale analysis. PLoS ONE, 13 (8). e0202206.

Hempson, Tessa N., Graham, Nicholas A.J., MacNeil, M. Aaron, Williamson, David H., Jones, Geoffrey P., and Almany, Glenn (2017) Coral reef mesopredators switch prey, shortening food chains, in response to habitat degradation. Ecology and Evolution, 7 (8). pp. 2626-2635.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Depth distribution and abundance of a coral-associated reef fish: roles of recruitment and post-recruitment processes. Coral Reefs, 36 (1). pp. 157-166.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Habitat morphology contrains the depth distribution and growth rate of a coral-associated reef fish. Marine Ecology Progress Series, 576. pp. 43-53.

Krueck, Nils C., Ahmadia, Gabby N., Green, Alison, Jones, Geoffrey P., Possingham, Hugh P., Riginos, Cynthia, Treml, Eric A., and Mumby, Peter J. (2017) Incorporating larval dispersal into MPA design for both conservation and fisheries. Ecological Applications, 27 (3). pp. 925-941.

McLeod, Ian M., Jones, Rhondda E., Jones, Geoffrey P., Takahashi, Miwa, and McCormick, Mark I. (2017) Interannual variation in the larval development of a coral reef fish in response to temperature and associated environmental factors. Marine Biology, 162. pp. 2379-2389.

Almany, Glenn R., Planes, Serge, Thorrold, Simon R., Berumen, Michael L., Bode, Michael, Saenz-Agudelo, Pablo, Bonin, Mary C., Frisch, Ashley J., Harrison, Hugo B., Messmer, Vanessa, Nanninga, Gerrit B., Priest, Mark A., Srinivasan, Maya, Sinclair-Taylor, Tane, Williamson, David H., and Jones, Geoffrey P. (2017) Larval fish dispersal in a coral-reef seascape. Nature Ecology & Evolution, 1 (6). pp. 1-4.

Pinsky, Malin L., Saenz-Agudelo, Pablo, Salles, Océane C., Almany, Glenn R., Bode, Michael, Berumen, Michael L., Andréfouët, Serge, Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2017) Marine dispersal scales are congruent over evolutionary and ecological time. Current Biology, 27 (1). pp. 149-154.

Harrison, Hugo B., Berumen, Michael L., Saenz-Agudelo, Pablo, Salas, Eva, Williamson, David H., and Jones, Geoffrey P. (2017) Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish. Molecular Ecology, 26 (20). pp. 5692-5704.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Size matters: male and female mate choice leads to size-assortative pairing in a coral reef cardinalfish. Behavioral Ecology, 27 (6). pp. 1585-1591.

Hopf, Jess K., Jones, Geoffrey P., Williamson, David H., and Connolly, Sean R. (2016) Synergistic effects of marine reserves and harvest controls on the abundance and catch dynamics of a coral reef fishery. Current Biology, 26 (12). pp. 1543-1548.

Wen, Colin K.C., Bonin, Mary C., Harrison, Hugo B., Williamson, David H., and Jones, Geoffrey (2016) Dietary shift in juvenile coral trout (Plectropomus maculatus) following coral reef degradation from a flood plume disturbance. Coral Reefs, 35 (2). pp. 451-455.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Sniffing out the competition? Juvenile coral reef damselfishes use chemical cues to distinguish the presence of conspecific and heterospecific aggregations. Behavioural Processes, 125. pp. 43-50.

Hughes, T.P., Cameron, D.S., Chin, A., Connolly, S.R., Day, J.C., Jones, G.P., McCook, L., McGinnity, P., Mumby, P.J., Pears, R.J., Pressey, R.L., Russ, G.R., Tanzer, J., Tobin, A., and Young, M.A.L. (2016) A critique of claims for negative impacts of Marine Protected Areas on fisheries. Ecological Applications, 26 (2). pp. 637-641.

Bonin, Mary C., Harrison, Hugo B., Williamson, David H., Frisch, Ashley J., Saenz-Agudelo, Pablo, Berumen, Michael L., and Jones, Geoffrey P. (2016) The role of marine reserves in the replenishment of a locally impacted population of anemonefish on the Great Barrier Reef. Molecular Ecology, 25 (2). pp. 487-499.

Bonin, Mary C., Saenz-Agudelo, Pablo, Harrison, Hugo B., Nanninga, Gerrit B., van der Meer, Martin H., Mansour, Hicham, Perumal, Sadhavisan, Jones, Geoffrey P., and Berumen, Michael L. (2016) Characterization and cross-amplification of microsatellite markers in four species of anemonefish (Pomacentridae, Amphiprion spp.). Marine Biodiversity, 46 (1). pp. 135-140.

MacDonald, Chancey, Bridge, Tom C.L., and Jones, Geoffrey P. (2016) Depth, bay position and habitat structure as determinants of coral reef fish distributions: are deep reefs a potential refuge? Marine Ecology - Progress Series, 561. pp. 217-231.

Finn, Maureen H., Lönnstedt, Oona M., Rizzari, Justin R., Jones, Geoffrey P., and Frisch, Ashley J. (2016) Experimental bleaching of a tropical sea anemone insitu. Marine Ecology, 37 (3). pp. 691-696.

Salles, Océane C., Pujol, Benoit, Maynard, Jeffrey A., Almany, Glenn R., Berumen, Michael L., Jones, Geoffrey P., Saenz-agudelo, Pablo, Srinivasan, Maya, Thorrold, Simon R., and Planes, Serge (2016) First genealogy for a wild marine fish population reveals multigenerational philopatry. Proceedings of the National Academy of Sciences of the United States of America, 113 (46). pp. 13245-13250.

Hopf, Jess K., Jones, Geoffrey P., Williamson, David H., and Connolly, Sean R. (2016) Fishery consequences of marine reserves: short-term pain for longer-term gain. Ecological Applications, 26 (3). pp. 818-829.

Salles, Océane C., Saenz-Agudelo, Pablo, Almany, Glenn R., Berumen, Michael L., Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2016) Genetic tools link long-term demographic and life-history traits of anemonefish to their anemone hosts. Coral Reefs, 35. pp. 1127-1138.

Gardiner, N.M., and Jones, G.P. (2016) Habitat specialisation, site fidelity and sociality predict homing success in coral reef cardinalfish. Marine Ecology Progress Series, 558. pp. 81-96.

Rueger, T., Gardiner, N.M., and Jones, G.P. (2016) Homing is not for everyone: displaced cardinalfish find a new place to live. Journal of Fish Biology, 89 (4). pp. 2182-2188.

Roberts, May B., Jones, Geoffrey P., McCormick, Mark I., Munday, Philip L., Neale, Stephen, Thorrold, Simon, Robitzch, Vanessa S.N., and Berumen, Michael L. (2016) Homogeneity of coral reef communities across 8 degrees of latitude in the Saudi Arabian Red Sea. Marine Pollution Bulletin, 105 (2). pp. 558-565.

Williamson, David H., Harrison, Hugo B., Almany, Glenn R., Berumen, Michael L., Bode, Michael, Bonin, Mary C., Choukroun, Severine, Doherty, Peter J., Frisch, Ashley J., Saenz-Agudelo, Pablo, and Jones, Geoffrey P. (2016) Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park. Molecular Ecology, 25 (24). pp. 6039-6054.

Sambrook, Katie, Jones, Geoffrey P., and Bonin, Mary C. (2016) Life on the edge: coral reef fishes exhibit strong responses to a habitat boundary. Marine Ecology Progress Series, 561. pp. 203-215.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2016) Olfactory responses of coral-reef fishes to coral degradation and crown-of-thorns (Acanthaster planci). Marine and Freshwater Research, 67 (5). pp. 605-611.

Bode, Michael, Williamson, David H., Weeks, Rebecca, Jones, Geoff P., Almany, Glenn R., Harrison, Hugo B., Hopf, Jess K., and Pressey, Robert L. (2016) Planning marine reserve networks for both feature representation and demographic persistence using connectivity patterns. PLoS ONE, 11 (5). pp. 1-23.

Hixon, M.A., Cinner, J.E., Feary, D.A., Green, A.L., Hamilton, R.J., Jones, Geoff, and Jupiter, S.D. (2016) Reef fish ecology, conservaton, and fisheries: the scientific legacy of Glenn Almany. In: Proceedings of the 13th International Coral Reef Symposium. 20. pp. 159-168. From: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Herrera, Marcela, Nanninga, Gerrit B., Planes, Serge, Jones, Geoffrey P., Thorrold, Simon R., Saenz-Agudelo, Pablo, Almany, Glenn R., and Berumen, Michael L. (2016) Seascape and life-history traits do not predict self-recruitment in a coral reef fish. Biology Letters, 12 (8). 20160309. pp. 1-4.

Rueger, Theresa, Harrison, Hugo B., Jones, Geoffrey P., Mansour, Hicham, and Berumen, Michael L. (2015) Resolving genealogical relationships in the Pyjama cardinalfish, Sphaeramia nematoptera (Apogonidae) with 23 novel microsatellite markers. Conservation Genetics Resources, 7 (3). pp. 623-626.

Gainsford, A., Van Herwerden, L., and Jones, G.P. (2015) Hierarchical behaviour, habitat use and species size differences shape evolutionary outcomes of hybridization in a coral reef fish. Journal of Evolutionary Biology, 28 (1). pp. 205-222.

Cipresso Pereira, Pedro H., Munday, Philip L., and Jones, Geoffrey P. (2015) Competitive mechanisms change with ontogeny in coral-dwelling gobies. Ecology, 96 (11). pp. 3090-3101.

Salles, Océane C., Maynard, Jeffrey A., Joannides, Marc, Barbu, Corentin M., Saenz-Agudelo, Pablo, Almany, Glenn R., Berumen, Michael L., Thorrold, Simon R., Jones, Geoffrey P., and Planes, Serge (2015) Coral reef fish populations can persist without immigration. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1819). pp. 1-9.

Jankowski, M.W., Gardiner, N.R., and Jones, G.P. (2015) Depth and reef profile: effects on the distribution and abundance of coral reef fishes. Environmental Biology of Fishes, 98 (5). pp. 1373-1386.

Jankowski, M.W., Graham, N.A.J., and Jones, G.P. (2015) Depth gradients in diversity, distribution and habitat specialisation in coral reef fishes: implications for the depth-refuge hypothesis. Marine Ecology Progress Series, 540. pp. 203-215.

Wenger, Amelia S., Fabricius, Katharina E., Jones, Geoffrey P., and Brodie, Jon E. (2015) Effects of sedimentation, eutrophication and chemical pollution on coral reef fishes. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 145-153.

McLeod, I.M., McCormick, M.I., Munday, P.L., Clark, T.D., Wenger, A.S., Brooker, R.M., Takahashi, M., and Jones, G.P. (2015) Latitudinal variation in larval development of coral reef fishes: implications of a warming ocean. Marine Ecology Progress Series, 521. pp. 129-141.

Jones, Geoffrey P. (2015) Mission impossible: unlocking the secrets of coral reef fish dispersal. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 16-27.

Saenz-agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2015) Mothers matter: contribution to local replenishment is linked to female size, mate replacement and fecundity in a fish metapopulation. Marine Biology, 162 (1). pp. 3-14.

Holbrook, Sally J., Schmitt, Russell J., Messmer, Vanessa, Brooks, Andrew J., Srinivasan, Maya, Munday, Philip L., and Jones, Geoffrey P. (2015) Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species. PLoS One, 10 (5). e0124054. pp. 1-12.

Johansen, Jacob L., Steffensen, John F., and Jones, Geoffrey P. (2015) Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes. Conservation Physiology, 3 (1). cov039. pp. 1-12.

Brooker, Rohan M., Munday, Philip L., Chivers, Douglas P., and Jones, Geoffrey P. (2015) You are what you eat: diet-induced chemical crypsis in a coral-feeding reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1799). 20141887.

Bonin, Mary C., Boström-Einarsson, Lisa, Munday, Philip L., and Jones, Geoffrey P. (2015) The prevalence and importance of competition among coral reef fishes. Annual Review of Ecology, Evolution, and Systematics, 46. pp. 169-190.

Brooker, R.M., Munday, P.L., Brandl, S.J., and Jones, G.P. (2014) Local extinction of a coral reef fish explained by inflexible prey choice. Coral Reefs, 33 (4). pp. 891-896.

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Mansour, Hicham, Perumal, Sadhasivam, Williamson, David H., and Berumen, Michael L. (2014) Validation of microsatellite multiplexes for parentage analysis in a coral reef fish (Lutjanus carponotatus, Lutjanidae). Conservation Genetics Resources, 6 (4). pp. 803-806.

Wenger, Amelia S., McCormick, Mark I., Endo, Geoff G.K., McLeod, Ian M., Kroom, Frederieke J., and Jones, Geoffrey P. (2014) Suspended sediment prolongs larval development in a coral reef fish. Journal of Experimental Biology, 217. pp. 1122-1128.

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Ma, Kayan, Mansour, Hicham, Perumal, Sadhasivan, Williamson, David H., and Berumen, Michael L. (2014) Validation of microsatellite multiplexes for parentage analysis and species discrimination in two hybridizing species of coral reef fish (Plectropomus spp., Serranidae). Ecology and Evolution, 4 (11). pp. 2046-2057.

Stella, J.S, Munday, P.L., Walker, S.P.W., Pratchett, M.S., and Jones, G.P. (2014) From cooperation to combat: adverse effect of thermal stress in a symbiotic coral-crustacean community. Oecologia, 174 (4). pp. 1187-1195.

Berkström, Charlotte, Jones, Geoffrey P., and McCormick, Mark I. (2014) Trade-offs in the ecological versatility of juvenile wrasses: an experimental evaluation. Journal of Experimental Marine Biology and Ecology, 453. pp. 91-97.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., and Thorrold, Simon R. (2014) Experimental evaluation of imprinting and the role innate preference plays in habitat selection in a coral reef fish. Oecologia, 174 (1). pp. 99-107.

Messmer, Vanessa, Blowes, Shane A., Jones, Geoffrey P., and Munday, Philip L. (2014) Experimental evaluation of diversity-productivity relationships in a coral reef fish assemblage. Oecologia, 176 (1). pp. 237-249.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2014) Habitat degradation modifies the strength of interspecific competition in coral dwelling damselfishes. Ecology, 95 (11). pp. 3056-3067.

Williamson, David H., Ceccarelli, Daniela M., Evans, Richard D., Jones, Geoffrey P., and Russ, Garry R. (2014) Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities. Ecology and Evolution, 4 (4). pp. 337-354.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2014) Multispecies spawning sites for fishes on a low-latitude coral reef: spatial and temporal patterns. Journal of Fish Biology, 84 (4). pp. 1136-1163.

Rueger, Theresa, Gardiner, Naomi M., and Jones, Geoffrey P. (2014) Relationships between pair formation, site fidelity and sex in a coral reef cardinalfish. Behavioural Processes, 107. pp. 119-126.

Komyakova, Valeriya, Munday, Philip L., and Jones, Geoffrey P. (2013) Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities. PLoS ONE, 8 (12). e83178. pp. 1-12.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) On minimizing assignment errors and the trade-off between false positives and negatives in parentage analysis. Molecular Ecology, 22 (23). pp. 5738-5742.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2013) Strong intraspecific competition and habitat selectivity influence abundance of a coral-dwelling damselfish. Journal of Experimental Marine Biology and Ecology, 448. pp. 85-92.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Within-colony feeding selectivity by a corallivorous reef fish: foraging to maximize reward? Ecology and Evolution, 3 (12). pp. 4109-4118.

Brooker, R.M., Munday, P.L., Mcleod, I.M., and Jones, G.P. (2013) Habitat preferences of a corallivorous reef fish: predation risk versus food quality. Coral Reefs, 32 (3). pp. 613-622.

Johansen, J.L., and Jones, G.P. (2013) Sediment-induced turbidity impairs foraging performance and prey choice of planktivorous coral reef fishes. Ecological Applications, 23 (6). pp. 1504-1517.

Wen, C.K.C., Pratchett, M.S., Almany, G.R., and Jones, G.P. (2013) Patterns of recruitment and microhabitat associations for three predatory coral reef fishes on the southern Great Barrier Reef, Australia. Coral Reefs, 32 (2). pp. 389-398.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Prey selectivity affects reproductive success of a corallivorous reef fish. Oecologia, 172 (2). pp. 409-416.

Wenger, A.S., McCormick, M.I., McLeod, I.M., and Jones, G.P. (2013) Suspended sediment alters predator–prey interactions between two coral reef fishes. Coral Reefs, 32 (2). pp. 369-374.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2013) Olfactory discrimination in juvenile coral reef fishes: response to conspecifics and corals. Journal of Experimental Marine Biology and Ecology, 443. pp. 21-26.

Almany, Glenn R., Hamilton, Richard J., Bode, Michael, Matawai, Manuai, Potuku, Tapas, Saenz-Agudelo, Pablo, Planes, Serge, Berumen, Michael L., Rhodes, Kevin L., Thorrold, Simon R., Russ, Garry R., and Jones, Geoffrey P. (2013) Dispersal of grouper larvae drives local resource sharing in a coral reef fishery. Current Biology, 23 (7). pp. 626-630.

Roy, Alexandra-Sophie, Frisch, Ashley J., Syms, Craig, Thorrold, Simon R., and Jones, Geoffrey P. (2013) Retention of a transgenerational marker (137Barium) in tissues of adult female anemonefish and assessment of physiological stress. Environmental Biology of Fishes, 96 (4). pp. 459-466.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) Relative accuracy of three common methods of parentage analysis in natural populations. Molecular Ecology, 22 (4). pp. 1158-1170.

Cvitanovic, C., Wilson, S.K., Fulton, C.J., Almany, G.R., Anderson, P., Babcock, R.C., Ban, N.C., Beeden, R.J., Beger, M., Cinner, J., Dobbs, K., Evans, L.S., Farham, A., Friedman, K.J., Gale, K., Gladstone, W., Grafton, Q., Graham, N.A.J., Gudge, S., Harrison , P.L., Holmes, T.H., Johnstone, N., Jones, G.P., Jordan, A., Kendrick, A.J., Klein, C.J., Little , L.R., Malcolm , H.A., Morris, D., Possingham, H.P., Prescott, J., Pressey, R.L., Skilleter, G.A., Simpson, C., Waples, K., Wilson, D., and Williamson, D.H. (2013) Critical research needs for managing coral reef marine protected areas: perspectives of academics and managers. Journal of Environmental Management, 114. pp. 84-91.

McLeod, Ian M., Rummer, Jodie L., Clark, Timothy D., Jones, Geoffrey P., McCormick, Mark I., Wenger, Amelia S., and Munday, Philip L. (2013) Climate change and the performance of larval coral reef fishes: the interaction between temperature and food availability. Conservation Physiology, 1 (1). pp. 1-12.

Jones, G.P. (2013) Ecology of rocky reef fish of northeastern New Zealand: 50 years on. New Zealand Journal of Marine and Freshwater Research, 47 (3). pp. 334-359.

Hobbs, Jean-Paul, van Herwerden, Lynne, Jerry, Dean R., Jones, Geoffrey P., and Munday, Philip L. (2013) High genetic diversity in geographically remote populations of endemic and widespread coral reef angelfishes (genus: Centropyge). Diversity, 5 (1). pp. 39-50.

Wen, Colin K.C., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., Mannering, Thomas D., Evans, Richard D., Leis, Jeffrey M., Srinivasan, Maya, and Jones, Geoffrey P. (2013) Recruitment hotspots boost the effectiveness of no-take marine reserves. Biological Conservation, 166. pp. 124-131.

Wen, Colin K.C., Pratchett, Morgan S., Almany, Glenn R., and Jones, Geoffrey P. (2013) Role of prey availability in microhabitat preferences of juvenile coral trout (Plectropomus: Serranidae). Journal of Experimental Marine Biology and Ecology, 443. pp. 39-45.

Wen, Colin K., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., and Jones, Geoffrey P. (2012) Evaluating the effects of marine reserves on diet, prey availability and prey selection by juvenile predatory fishes. Marine Ecology Progress Series, 469. pp. 133-144.

Feeney, W.E., Lönnstedt, O.M., Bosiger, Y., Martin, J., Jones, G.P., Rowe, R.J., and McCormick, M.I. (2012) High rate of prey consumption in a small predatory fish on coral reefs. Coral Reefs, 31 (3). pp. 909-918.

Pratchett, Morgan S., Coker, Darren J., Jones, Geoffrey P., and Munday, Philip L. (2012) Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss. Ecology and Evolution, 2 (9). pp. 2168-2180.

Berkstrom, Charlotte, Jones, Geoffrey P., McCormick, Mark I., and Srinivasan, Maya (2012) Ecological versatility and its importance for the distribution and abundance of coral reef wrasses. Marine Ecology Progress Series, 461. pp. 151-163.

Noonan, Sam H.C., Jones, Geoffrey P., and Pratchett, Morgan S. (2012) Coral size, health and structural complexity: effects on the ecology of a coral reef damselfish. Marine Ecology Progress Series, 456. pp. 127-137.

Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., and Jones, Geoffrey P. (2012) Larval export from marine reserves and the recruitment benefit for fish and fisheries. Current Biology, 22 (11). pp. 1023-1028.

Buston, Peter M., Jones, Geoffrey P., Planes, Serge, and Thorrold, Simon R. (2012) Probability of successful larval dispersal declines fivefold over 1 km in a coral reef fish. Proceedings of the Royal Society of London B: Biological Sciences, 279 (1735). pp. 1883-1888.

Claydon, J.A.B., McCormick, M.I., and Jones, G.P. (2012) Patterns of migration between feeding and spawning sites in a coral reef surgeonfish. Coral Reefs, 31 (1). pp. 77-87.

Berumen, Michael L., Almany, Glenn R., Planes, Serge, Jones, Geoffrey P., Saenz-Agudelo, Pablo, and Thorrold, Simon R. (2012) Persistence of self-recruitment and patterns of larval connectivity in a marine protected area network. Ecology and Evolution, 2 (2). pp. 444-452.

Hobbs, Jean-Paul A., Jones, Geoffrey P., Munday, Philip L., Connolly, Sean R., and Srinivasan, Maya (2012) Biogeography and the structure of coral reef fish communities on isolated islands. Journal of Biogeography, 39 (1). pp. 130-139.

Devine, Brynn M., Munday, Philip L., and Jones, Geoffrey P. (2012) Homing ability of adult cardinalfish is affected by elevated carbon dioxide. Oecologia, 168 (1). pp. 269-276.

Messmer, Vanessa, Jones, Geoffrey, Munday, Philip, and Planes, Serge (2012) Concordance between genetic and species diversity in coral reef fishes across the pacific ocean biodiversity gradient. Evolution, 66 (12). pp. 3902-3917.

van der Meer, Martin, Hobbs, Jean-Paul, Jones, Geoffrey, and Van Herwerden, Lynne (2012) Genetic Connectivity among and self-replenishment within island populations of a restricted range subtropical reef fish. PLoS ONE, 7 (11). e49660. pp. 1-11.

van der Meer, M.H., Jones, G.P., Hobbs, J.-P.A., and Van Herwerden, L. (2012) Historic hybridization and introgression between two iconic Australian anemonefish and contemporary patterns of population connectivity. Ecology and Evolution, 2 (7). pp. 1592-1604.

van der Meer, Martin H., Gardner, Michael G., Hobbs, Jean-Paul A., Jones, G.P., and van Herwerden, Lynne (2012) Identification of seventeen microsatellite markers for conservation genetic studies of the endemic anemonefish, Amphiprion mccullochi. Conservation Genetics Resources, 4 (2). pp. 247-250.

Wenger, Amelia S., Johansen, Jacob L., and Jones, Geoffrey P. (2012) Increasing suspended sediment reduces foraging, growth and condition of a planktivorous damselfish. Journal of Experimental Marine Biology and Ecology, 428. pp. 43-48.

Takahashi, Miwa, McCormick, Mark, Munday, Philip, and Jones, Geoffrey (2012) Influence of seasonal and latitudinal temperature variation on early life-history traits of a coral reef fish. Marine and Freshwater Research, 63. pp. 856-864.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2012) Patterns and persistence of larval retention and connectivity in a marine fish metapopulation. Molecular Ecology, 21 (19). pp. 4695-4705.

Eagle, Janelle V., Baird, Andrew H., Jones, Geoffrey P., and Kingsford, Michael J. (2012) Recruitment hotspots: consistent spatial patterns in the relative abundance of coral recruits at One Tree Island, Australia. Galaxea, Journal of Coral Reef Studies, 14 (1). pp. 5-22.

Devine, B.M., Munday, P.L., and Jones, G.P. (2012) Rising CO2 concentrations affect settlement behaviour of larval damselfishes. Coral Reefs, 31 (1). pp. 229-238.

Messmer, Vanessa, Jones, Geoffrey P., Munday, Philip L., Holbrook, Sally J., Schmitt, Russell J., and Brooks, Andrew J. (2011) Habitat biodiversity as a determinant of fish community structure on coral reefs. Ecology, 92 (12). pp. 2285-2298.

Dixson, D.L., Munday, P.L., Pratchett, M., and Jones, G.P. (2011) Ontogenetic changes in responses to settlement cues by anemonefish. Coral Reefs, 30 (4). pp. 903-910.

Wenger, Amelia S., Johansen, J.L., and Jones, G.P. (2011) Suspended sediment impairs habitat choice and chemosensory discrimination in two coral reef fishes. Coral Reefs, 30 (4). pp. 879-887.

Dixson, Danielle L., Jones, Geoffrey P., Munday, Philip L., Pratchett, Morgan S., Srinivasan, Maya, Planes, Serge, and Thorrold, Simon R. (2011) Terrestrial chemical cues help coral reef fish larvae locate settlement habitat surrounding islands. Ecology and Evolution, 1 (4). pp. 586-595.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2011) Connectivity dominates larval replenishment in a coastal reef fish metapopulation. Proceedings of the Royal Society of London Series B, Biological Sciences, 278 (1720). pp. 2954-2961.

Hobbs, J-P. A., Jones, G.P., and Munday, P.L. (2011) Extinction risk in endemic marine fishes. Conservation Biology, 25 (5). pp. 1053-1055.

Brooker, R.M., Munday, P.L., and Jones, G.P. (2011) Coral obligate filefish masquerades as branching coral. Coral Reefs, 30 (3). p. 803.

Stella, J.S., Munday, P.L., and Jones, G.P. (2011) Effects of coral bleaching on the obligate coral-dwelling crab Trapezia cymodoce. Coral Reefs, 30 (3). pp. 719-727.

Johansen, J.L., and Jones, G.P. (2011) Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17 (9). pp. 2971-2979.

Beukers-Stewart, B.D., Beukers-Stewart, J.S, and Jones, G.P. (2011) Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs, 30 (3). pp. 855-864.

Stella, Jessica S., Pratchett, Morgan S., Hutchings, Pat A., and Jones, Geoffrey P. (2011) Coral-associated invertebrates: diversity, ecology importance and vulnerability to disturbance. Oceanography and Marine Biology: an annual review, 49. pp. 43-104.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Bonin, Mary C., Almany, Glenn R., and Jones, Geoffrey P. (2011) Contrasting effects of habitat loss and fragmentation on coral-associated reef fishes. Ecology, 92 (7). pp. 1503-1512.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2011) Detrimental effects of host anemone bleaching on anemonefish populations. Coral Reefs, 30 (2). pp. 497-506.

Krajewski, João Paulo, Floeter, Sergio R., Jones, Geoffrey P., and Leite, Fosca P.P (2011) Patterns of variation in behaviour within and among reef fish species on an isolated tropical island: influence of exposure and substratum. Journal of the Marine Biological Association of the United Kingdom, 91 (Special Issue 6). pp. 1359-1368.

Berumen, M. L, Walsh, H.J., Raventos, N., Planes, S., Jones, G.P., Starczak, V., and Thorrold, S.R. (2010) Otolith geochemistry does not reflect dispersal history of clownfish larvae. Coral Reefs, 29 (4). pp. 883-891.

Gardiner, N.M., and Jones, G.P. (2010) Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish. Coral Reefs, 29 (4). pp. 845-856.

McCook, Laurence, Ayling, Anthony, Cappo, Mike, Choat, J. Howard, Evans, Richard D., De Freitas, Debora M., Heupel, Michelle, Hughes, Terry P., Jones, Geoffrey P., Mapstone, Bruce, Marsh, Helene, Mills, Morena, Molloy, Fergus J., Pitcher, C. Roland, Pressey, Robert L., Russ, Garry R., Sutton, Stephen, Sweatman, Hugh, Tobin, Renae, Wachenfeld, David R., and Williamson, David H. (2010) Adaptive management of the Great Barrier Reef: A globally significant demonstration of the benefits of networks of marine reserves. Proceedings of the National Academy of Sciences of the United States of America, 107 (43). 18278- 18285.

Almany, G.R., Hamilton, R.J., Williamson, D.H., Evans, R.D., Jones, G.P., Matawai, M., Potuku, T., Rhodes, K.L., Russ, G.R., and Sawynock, B. (2010) Research partnerships with local communities: two case studies from Papua New Guinea and Australia. Coral Reefs, 29 (3). pp. 567-576.

Cole, A.J, Pratchett, M.S., and Jones, G.P. (2010) Corallivory in tubelip wrasses: diet, feeding and trophic importance. Journal of Fish Biology, 76 (4). pp. 818-835.

Dixson, Danielle L., Munday, Philip L., and Jones, Geoffrey P. (2010) Ocean acidification disrupts the innate ability of fish to detect predator olfactory cues. Ecology Letters, 13 (1). pp. 68-75.

Wilson, S.K., Adjeroud, M., Bellwood, D.R., Berumen, M.L., Booth, D., Bozec, Y.-Marie, Chabanet, P., Cheal, A., Cinner, J., Depczynski, M., Feary, D.A., Gagliano, M., Graham, Nicholas, Halford, A.H., Halpern, B.S., Harborne, A.R., Hoey, A.S., Holbrook, S.J., Jones, G.P., Kulbiki, M., Letourneur, Y., De Loma, T.L., McClanahan, T, McCormick, M.I., Meekan, M.G., Mumby, P. J., Munday, P.L., Öhman, M.C., Pratchett, M.S., Riegl, B., Sano, M., Schmitt, R.J., and Syms, C. (2010) Crucial knowledge gaps in current understanding of climate change impacts on coral reef fishes. Journal of Experimental Biology, 213. pp. 894-900.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Hobbs, Jean-Paul A,, Jones, G.P., and Munday, P.L. (2010) Rarity and extinction risk in coral reef angelfishes on isolated islands: interrelationships among abundance, geographic range size and specialisation. Coral Reefs, 29 (1). pp. 1-11.

Stella, J.S., Jones, G.P., and Pratchett, M.S. (2010) Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, 29 (4). pp. 957-973.

Cole, Andrew J, Chong-Seng, Karen, Pratchett, Morgan S., and Jones, Geoffrey P. (2009) Coral-feeding fishes slow progression of black-band disease. Coral Reefs, 28 (4). p. 965.

Bonin, Mary C., Munday, Philip L., McCormick, Mark I., Srinivasan, Maya, and Jones, Geoffrey P. (2009) Coral-dwelling fishes resistant to bleaching but not to mortality of host corals. Marine Ecology Progress Series, 394. pp. 215-222.

Molecular Ecology Resources Primer Development Consortium, Almany, Glenn R., De Arruda, Maurício P., Arthofer, Wolfgang, Atallah, Z.K., Beissinger, Steven R., Berumen, Michael L., Bogdanowicz, S.M., Brown, S.D., Bruford, Michael W., Burdine, C., Busch, Jeremiah W., Campbell, Nathan R., Carey, D., Carstens, Bryan C., Chu, K.H., Cubeta, Marc A., Cuda, J.P., Cui, Zhaoxia, Datnoff, L.E., Dávila, J.A., Davis, Emily S., Davis, R.M., Diekmann, Onno E., Eizirik, Eduardo, Fargallo, J.A., Fernandes, Fabiano, Fukuda, Hideo, Gale, L.R., Gallagher, Elizabeth, Gao, Yongqiang, Girard, Philippe, Godhe, Anna, Gonçalves, Evonnildo C., Gouveia, Licinia, Grajczyk, Amber M., Grose, M.J., Gu, Zhifeng, Halldén, Christer, Härnström, Karolina, Hemmingsen, Amanda H., Holmes, Gerald, Huang, C.H., Huang, Chuan-chin, Hudman, S.P., Jones, Geoffrey P., Kanetis, Loukas, Karunasagar, Iddya, Karunasagar, Indrani, Keyghobadi, Nusha, Klosterman, S.J., Klug, Page E., Koch, J., Koopman, Margaret M., Köppler, Kirsten, Koshimizu, Eriko, Krumböck, Susanne, Kubisiak, T., Landis, J.B., Lasta, Mario L., Lee, Chow-Yang, Li, Qianqian, Li, Shou-Hsien, Lin, Rong-Chien, Liu, M., Liu, Na, Liu, W.C., Liu, Yuan, Loiseau, A., Luan, Weisha, Maruthachalam, K.K., McCormick, Helen M., Mellick, Rohan, Monnahan, P.J., Morielle-Versute, Eliana, Murray, Tomás E., Narum, Shawn R., Neufeld, Katie, De Nova, P.J.G., Ojiambo, Peter S., Okamoto, Nobuaki, Othman, Ahmad Sofiman, Overholt, W.A., Pardini, Renata, Paterson, Ian G., Patty, Olivia A., Paxton, Robert J., Planes, Serge, Porter, Carolyn, Pratchett, Morgan S., Püttker, Thomas, Rasic, Gordana, Rasool, Bilal, Rey, O., Riegler, Markus, Riehl, C., Roberts, John M.K., Roberts, P.D., Rochel, Elisabeth, Roe, Kevin J., Rossetto, Maurizio, Ruzzante, Daniel E., Sakamoto, Takashi, Saravanan, V., Sarturi, Cladinara Roberts, Schmidt, Anke, Schneider, Maria Paula Cruz, Schuler, Hannes, Serb, Jeanne M., Serrão, Ester T.A., Shi, Yaohua, Silva, Artur, Sin, Y.W., Sommer, Simone, Stauffer, Christian, Strüssmann, Carlos Augusto, Subbarao, K.V., Syms, Craig, Tan, Feng, Tejedor, Eugenio Daniel, Thorrold, Simon R., Trigiano, Robert N., Trucco, María I., Tsuchiya-Jerep, Mirian Tienko Nunes, Vergara, P., van de Vliet, Mirjam S., Wadl, Phillip A., Wang, Aimin, Wang, Hongxia, Wang, R.X., Wang, Xinwang, Wang, Yan, Weeks, Andrew R., Wei, Fuwen, Werner, William J., Wiley, E.O., Williams, D.A., Wilkins, Richard J., Wisely, Samantha M., With, Kimberly A., Wu, Danhua, Yao, Cheng-Te, Yau, Cynthia, Yeap, Beng-Keok, Zhai, Bao-Ping, Zhan, Xiangjiang, Zhang, Guo-Yan, Zhang, S.Y., Zhao, Ru, and Zhu, Lifeng (2009) Permanent genetic resources added to Molecular Ecology Resources Database 1 May 2009–31 July 2009. Molecular Ecology Resources, 9 (6). pp. 1460-1466.

Botsford, L.W., White, J.W., Coffroth, M-A., Paris, C.B., Planes, S., Shearer, T.L., Thorrold, S.R., and Jones, G.P. (2009) Connectivity and resilience of coral reef metapopulations in marine protected areas: matching empirical efforts to predictive needs. Coral Reefs, 28 (2). pp. 327-337.

Almany, G.R., Connolly, S.R., Heath, D.D., Hogan, J.D., Jones, G.P., McCook, L.J., Mills, M., Pressey, R.L., and Williamson, D.H. (2009) Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs. Coral Reefs, 28 (2). pp. 339-351.

Jones, G.P., Almany, G.R., Russ, G.R., Sale, P.F., Steneck, R.S., Van Oppen, M.J.H., and Willis, B.L. (2009) Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28 (2). pp. 307-325.

McCook, L.J., Almany, G.R., Berumen, M.L., Day, J.C., Green, A.L., Jones, G.P., Leis, J.M., Planes, S., Russ, G.R., Sale, P.F., and Thorrold, S.R. (2009) Management under uncertainty: guide-lines for incorporating connectivity into the protection of coral reefs. Coral Reefs, 28 (2). pp. 353-366.

Jones, G.P., Russ, G.R., Sale, P.F., and Steneck, R.S. (2009) Theme section on “Larval connectivity, resilience and the future of coral reefs”. Coral Reefs, 28 (2). pp. 303-305.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Effects of coral bleaching on the feeding response of two species of coral-feeding fish. Journal of Experimental Marine Biology and Ecology, 373. pp. 11-15.

Feary, David A., McCormick, Mark I., and Jones, Geoffrey P. (2009) Growth of reef fishes in response to live coral cover. Journal of Experimental Marine Biology and Ecology, 373 (1). pp. 45-49.

Planes, Serge, Jones, Geoffrey P., and Thorrold, Simon R. (2009) Larval dispersal connects fish populations in a network of marine protected areas. Proceedings of the National Academy of Sciences, 106 (14). pp. 5693-5697.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2009) Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios. Molecular Ecology, 18 (8). pp. 1765-1776.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Coral-feeding wrasse scars massive Porites colonies. Coral Reefs, 28 (1). p. 207.

Bonin, M.C., Srinivasan, M., Almany, G.R., and Jones, G.P. (2009) Interactive effects of interspecifc competition and microhabitat on early post-settlement survival in a coral reef fish. Coral Reefs, 28 (1). pp. 265-274.

Williamson, David, Jones, Geoffrey, Thorrold, Simon R, and Frisch, Ashley J. (2009) Transgenerational marking of marine fish larvae: stable-isotope retention, physiological effects and health issues. Journal of Fish Biology, 74 (4). pp. 891-905.

Munday, Philip L., Dixson, Danielle L., Donelson, Jennifer M., Jones, Geoffrey P., Pratchett, Morgan S., Devitsina, Galina V., and Døving, Kjell B. (2009) Ocean acidification impairs olfactory discrimination and homing ability of a marine fish. Proceedings of the National Academy of Sciences of the United States of America, 106 (6). pp. 1848-1852.

Pratchett, M.S., Wilson, S.K., Graham, N.A.J., Munday, P.L., Jones, G.P., and Polunin, N.V.C. (2009) Coral bleaching and consequences for motile reef organisms: past, present and uncertain future effects. In: van Oppen, M.J.H., and Lough, J.M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 205 . Springer, Germany, pp. 139-158.

Williamson, David H., Jones, Geoffrey P., and Thorrold, Simon R. (2009) An experimental evaluation of transgenerational isotope labelling in a coral reef grouper. Marine Biology, 156. pp. 2517-2525.

Dixson, Danielle L. , Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., Srinivasan, Maya, Syms, Craig, and Thorrold, Simon R. (2008) Coral reef fish smell leaves to find island homes. Proceedings of the Royal Society of London Series B, Biological Sciences, 275. pp. 2831-2839.

Munday, Philip L., Jones, Geoffrey P., Pratchett, Morgan S., and Williams, Ashley J. (2008) Climate change and the future for coral reef fishes. Fish and Fisheries, 9 (3). pp. 261-285.

Steneck, Robert H., Bustamante, Rodrigo H., Dayton, Paul K., Jones, Geoffrey P., and Hobday, Alistair J. (2008) Current status and future trends in kelp forest ecosystems. In: Polunin, Nicholas V.C., (ed.) Aquatic Ecosystems: trends and global prospects. Cambridge University Press, Cambridge, UK, pp. 226-241.

Cole, Andrew J., Pratchett, Morgan S., and Jones, Geoffrey P. (2008) Diversity and functional importance of coral-feeding fishes on tropical coral reefs. Fish and Fisheries, 9. pp. 286-307.

Wong, Marian Y.L., Munday, Philip L., Buston, Peter, and Jones, Geoffrey P. (2008) Fasting or feasting in a fish social hierarchy. Current Biology, 18 (9). R372-R373.

Wong, Marian Y.L., Munday, Philip L., Buston, Peter M., and Jones, Geoffrey P. (2008) Monogamy when there is potential for polygyny: tests of multiple hypotheses in a group-living fish. Behavioral Ecology, 19 (2). pp. 353-361.

Chin, Andrew, Sweatman, Hugh, Forbes, Susan, Perks, Helen, Walker, Ryan, Jones, Geoff, Williamson, David, Evans, Richard, Hartley, Fraser, Armstrong, Shannon, Malcolm, Hamish, and Edgar, Graham (2008) 2008 Status of the coral reefs in Australia and Papua New Guinea. In: Wilkinson, Clive, (ed.) Status of Coral Reefs of the World: 2008. Global Coral Reef Monitoring Network, Townsville, QLD, Australia, pp. 159-176.

Pratchett, Morgan S., Munday, Philip L., Wilson, Shaun K., Graham, Nicholas A.J., Cinner, Joshua E., Bellwood, David R., Jones, Geoffrey P., Polunin, Nicholas V.C., and McClanahan, Tim R. (2008) Effects of climate-induced coral bleaching on coral-reef fishes - ecological and economic consequences. Oceanography and Marine Biology: an annual review, 46. pp. 251-296.

Limbourn, Andrew, Jones, Geoffrey, Munday, Philip, and Srinivasan, Maya (2007) Niche shifts and local competition between two coral reef fishes at their geographic boundary. Marine and Freshwater Research, 58 (12). pp. 1120-1129.

Feary, David A., Almany, Glenn R., McCormick, Mark I., and Jones, Geoffrey P. (2007) Habitat choice, recruitment and the response of coral reef fishes to coral degradation. Oecologia, 153 (3). pp. 727-737.

Jones, Geoffrey P., Srinivasan, Maya, and Almany, Glenn R. (2007) Population connectivity and conservation of marine biodiversity. Oceanography, 20 (3). pp. 100-111.

Almany, Glenn R., Peacock, Lisa F., Syms, Craig, McCormick, Mark I., and Jones, Geoffrey P. (2007) Predators target rare prey in coral reef fish assemblages. Oecologia, 152 (4). pp. 751-761.

Almany, Glenn R. , Berumen, Michael L., Thorrold, Simon R., Planes, Serge, and Jones, Geoffrey P. (2007) Local replenishment of coral reef fish populations in a marine reserve. Science, 316 (5825). pp. 742-744.

Wong, Marian Y.L., Buston, Peter M., Munday, Philip L., and Jones, Geoffrey P. (2007) The threat of punishment enforces peaceful cooperation and stabilizes queues in a coral-reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 274 (1613). pp. 1093-1099.

Feary, David A., Almany, Glenn R., Jones, Geoffrey P., and McCormick, Mark I. (2007) Coral degradation and the structure of tropical reef fish communities. Marine Ecology Progress Series, 333. pp. 243-248.

Thompson, V.J., Munday, P.L., and Jones, G.P. (2007) Habitat patch size and mating system as determinants of social group size in coral-dwelling fishes. Coral Reefs, 26 (1). pp. 165-174.

Munday, Philip L., Jones, Geoffrey P., Sheaves, Marcus, Williams, Ashley, and Goby, Gillian (2007) Vulnerability of fishes of the Great Barrier Reef to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and Australian Greenhouse Office, Townsville, QLD, Australia, pp. 357-391.

Jones, Geoffrey P., Santana, Lara, McCook, Laurence J., and McCormick, Mark I. (2006) Resource use and impact of three herbivorous damselfishes on coral reef communities. Marine Ecology Progress Series, 328. pp. 215-224.

Smith-Keune, C., Jerry, D.R., Evans, B.S., McCormick, M.I., Munday, P.L., and Jones, G.P. (2006) Development and characterization of eight new microsatellite markers for the haremic sandperch, Parapercis cylindrica (family Pinguipedidae). Molecular Ecology Resources, 6 (4). pp. 1036-1038.

Srinivasan, M., and Jones, G.P. (2006) Extended breeding and recruitment periods of fishes on a low latitude coral reef. Coral Reefs, 25 (4). pp. 673-682.

Wilson, Shaun K., Graham, Nicholas A.J., Pratchett, Morgan S., Jones, Geoffrey P., and Polunin, Nicholas V.C. (2006) Multiple disturbances and the global degradation of coral reefs: are reef fishes at risk or resilient? Global Change Biology, 12 (11). pp. 2220-2234.

Nardi, Kim, Newman, Stephen J., Moran, Michael J., and Jones, Geoffrey P. (2006) Vital demographic statistics and management of the baldchin groper (Choerodon rubescens) from the Houtman Abrolhos Islands. Marine and Freshwater Research, 57 (5). pp. 485-496.

Thorrold, Simon R., Jones, Geoffrey P., Planes, Serge, and Hare, Jonathan H. (2006) Transgenerational marking of embryonic otoliths in marine fishes using barium stable isotopes. Canadian Journal of Fisheries and Aquatic Sciences, 63 (6). pp. 1193-1197.

Pratchett, Morgan S., Pradjakusuma, Oki. A., and Jones, Geoffrey P. (2006) Is there a reproductive basis to solitary living versus pair-formation in coral reef fishes? Coral Reefs, 25 (1). pp. 85-92.

Beger, Maria, Jones, Geoffrey P., and Possingham, Hugh P. (2006) A method of statistical modelling of coral reef fish distribution: can it aid conservation planning in data poor regions? In: Proceedings of the 10th International Coral Reef Symposium. pp. 1445-1456. From: 10th International Coral Reef Symposium, 28 June-2 July 2004, Okinawa, Japan.

Gardiner, Naomi M., and Jones, Geoffrey P. (2005) Habitat specialisation and overlap in a guild of coral reef cardinalfishes (Apogonidae). Marine Ecology Progress Series, 305. pp. 163-175.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Effects of territorial damselfish on an algal-dominated coastal coral reef. Coral Reefs, 24 (4). pp. 606-620.

Hixon, Mark A., and Jones, Geoffrey P. (2005) Competition, predation, and density-dependent mortality in demersal marine fishes. Ecology, 86 (11). pp. 2847-2859.

Messmer, Vanessa, Jones, Geoffrey P., van Herwerden, Lynne, and Munday, Philip L. (2005) Genetic and ecological characterisation of colour dimorphism in a coral reef fish. Environmental Biology of Fishes, 74 (2). pp. 175-183.

Wong, Marian Y.L., Munday, Philip L., and Jones, Geoffrey P. (2005) Habitat patch size, facultative monogamy and sex change in a coral-dwelling fish, Caracanthus unipinna. Environmental Biology of Fishes, 74 (2). pp. 141-150.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Foragers versus farmers: contrasting effects of two behavioural groups of herbivores on coral reefs. Oecologia, 145 (3). pp. 445-453.

Moland, Even, Eagle, Janelle V., and Jones, Geoffrey P. (2005) Ecology and evolution of mimicry in coral reef fishes. In: Gibson, R.N., Atkinson, R.J.A., and Gordon, J.D.M., (eds.) Oceanography and Marine Biology: an annual review. Taylor & Francis, Boca Raton, FL, USA, pp. 455-482.

Sale, Peter F., Cowen, Robert K., Danilowicz, Bret S., Jones, Geoffrey P., Kritzer, Jacob P., Lindeman, Kenyon C., Planes, Serge, Polunin, Nicholas V.C., Russ, Garry R., Sadovy, Yvonne J., and Steneck, Robert S. (2005) Critical science gaps impede use of no-take fishery reserves. Trends in Ecology & Evolution, 20 (2). pp. 74-80.

Jones, Geoffrey P., Planes, Serge, and Thorrold, Simon R. (2005) Coral reef fish larvae settle close to home. Current Biology, 15 (14). pp. 1314-1318.

Messmer, Vanessa, van Herwerden, Lynne, Munday, Philip L., and Jones, Geoffrey P. (2005) Phylogeography of colour polymorphism in the coral reef fish Pseudochromis fuscus, from Papua New Guinea and the Great Barrier Reef. Coral Reefs, 24. pp. 392-402.

Hobbs, Jean-Paul A., Munday, Philip L., and Jones, Geoffrey P. (2004) Social induction of maturation and sex determination in a coral reef fish. Proceedings of the Royal Society of London Series B: biological sciences, 271 (1553). pp. 2109-2114.

Moland, Even, and Jones, Geoffrey P. (2004) Experimental confirmation of aggressive mimicry by a coral reef fish. Oecologia, 140 (4). pp. 676-683.

Nardi, K., Jones, G.P., Moran, M.J., and Cheng, Y.W. (2004) Contrasting effects of marine protected areas on the abundance of two exploited fishes at the sub-tropical Houtman Abrolhos Islands, Western Australia. Environmental Conservation, 31 (2). pp. 160-168.

Jones, Geoffrey P., McCormick, Mark I., Srinivasan, Maya, and Eagle, Janelle V. (2004) Coral decline threatens fish biodiversity in marine reserves. Proceedings of the National Academy of Sciences, 101 (21). pp. 8251-8253.

Syms, Craig, and Jones, Geoffrey P. (2004) Habitat structure, disturbance and the composition of sand-dwelling goby assemblages in a coral reef lagoon. Marine Ecology Progress Series, 268. pp. 221-230.

Beukers-Stewart, B.D., and Jones, G.P. (2004) The influence of prey abundance on the feeding ecology of two piscivorous species of coral reef fish. Journal of Experimental Marine Biology and Ecology, 299 (2). pp. 155-184.

Eagle, Janelle V., and Jones, Geoffrey P. (2004) Mimicry in coral reef fishes: ecological and behavioural responses of a mimic to its model. Journal of Zoology, 264 (1). pp. 33-43.

Munday, Philip L., Eyre, Peter J., and Jones, Geoffrey P. (2003) Ecological mechanisms for coexistence of colour polymorphism in a coral-reef fish: an experimental evaluation. Oecologia, 137 (4). pp. 519-526.

Schubert, Melissa, Munday, Philip L., Caley, M. Julian, Jones, Geoffrey P., and Llewellyn, Lyndon E. (2003) The toxicity of skin secretions from coral-dwelling gobies and their potential role as a predator deterrent. Environmental Biology of Fishes, 67 (2). pp. 359-367.

Beger, Maria, Jones, Geoffrey P., and Munday, Philip L. (2003) Conservation of coral reef biodiversity: a comparison of reserve selection procedures for corals and fishes. Biological Conservation, 111 (1). pp. 53-62.

Munday, P.L., Schubert, M., Baggio, J.A., Jones, G.P., Caley, M.J., and Grutter, A.S. (2003) Skin toxins and external parasitism of coral-dwelling gobies. Journal of Fish Biology, 62 (4). pp. 976-981.

Bean, Kyi, Jones, Geoffrey P., and Caley, M. Julian (2002) Relationships among distribution, abundance and microhabitat specialisation in a guild of coral reef triggerfish (family Balistidae). Marine Ecology - Progress Series, 233. pp. 263-272.

Jones, Geoffrey P., and McCormick, Mark I. (2002) Numerical and energetic processes in the ecology of coral reef fishes. In: Sale, Peter S., (ed.) Coral Reef Fishes: dynamic and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 221-238.

Jones, Geoffrey P., Caley, M. Julian, and Munday, Philip L. (2002) Rarity in coral reef fish communities. In: Sale, Peter F., (ed.) Coral Reef Fishes: dynamics and diversity in a complex ecosystem. Elsevier, San Diego, CA, USA, pp. 81-101.

Swearer, Stephen E., Shima, Jeffrey S., Hellberg, Michael E., Thorrold, Simon R., Jones, Geoffrey P., Robertson, D. Ross, Morgan, Steven G., Selkoe, Kimberly A., Ruiz, Gregory M., and Warner, Robert R. (2002) Evidence of self-recruitment in demersal marine populations. Bulletin of Marine Science, 70 (Supple). pp. 251-271.

Thorrold, Simon R., Jones, Geoffrey, Hellberg, Michael E., Burton, Ronald S., Swearer, Stephen E., Neigel, Jospeh E., Morgan, Steven G., and Warner, Robert R. (2002) Quantifying larval retention and connectivity in marine populations with artificial and natural markers. Bulletin of Marine Science, 70 (Supple). pp. 291-308.

Munday, Philip L., Pierce, Sarah J., Jones, Geoffrey P., and Larson, Helen K. (2002) Habitat use, social organization and reproductive biology of the seawhip goby, Bryaninops yongei. Marine and Freshwater Research, 53 (4). pp. 769-775.

Bay, L.K., Jones, G.P., and McCormick, M.I. (2001) Habitat selection and aggression as determinants of spatial segregation among damselfish on a coral reef. Coral Reefs, 20 (3). pp. 289-298.

Eagle, Janelle V., Jones, Geoffrey P., and McCormick, Mark I. (2001) A multi-scale study of the relationships between habitat use and the distribution and abundance patterns of three coral reef angelfishes (Pomacanthidae). Marine Ecology-Progress Series, 214. pp. 253-265.

Stewart, B.D., and Jones, G.P. (2001) Associations between the abundance of piscivorous fishes and their prey on coral reefs: implications for prey-fish mortality. Marine Biology, 138 (2). pp. 383-397.

Munday, Philip L., Jones, Geoffrey P., and Caley, M. Julian (2001) Interspecific competition and coexistence in a guild of coral-dwelling fishes. Ecology, 82 (8). pp. 2177-2189.

Emslie, Michael J., and Jones, Geoffrey P. (2001) Patterns of embryo mortality in a demersally spawning coral reef fish and the role of predatory fishes. Environmental Biology of Fishes, 60 (4). pp. 363-373.

Caley, M. Julian, Buckley, Kathryn A., and Jones, Geoffrey P. (2001) Separating ecological effects of habitat fragmentation, degradation, and loss on coral commensals. Ecology, 82 (12). pp. 3435-3448.

Syms, Craig, and Jones, Geoffrey P. (2001) Soft corals exert no direct effects on coral reef fish assemblages. Oecologia, 127 (4). pp. 560-571.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2001) Territorial damselfishes as determinants of the structure of benthic communities on coral reefs. Oceanography and Marine Biology: an annual review, 39. pp. 355-389.

Syms, Craig, and Jones, Geoffrey P. (2000) Disturbance, habitat structure, and the dynamics of a coral-reef fish community. Ecology, 81 (10). pp. 2714-2729.

Syms, Craig, and Jones, Geoff (1998) Community assembly of fish on small patch reefs: direct vs indirect disturbance. In: Jones, G.P., Doherty, P.J., Mapstone, B.D., and Howlett, L., (eds.) ReeFish '95: recruitment and population dynamics of coral reef fishes. CRC Reef Research Centre, Townsville, QLD, Australia, pp. 238-251.

Caley, M.J., Carr, M.H., Hixon, M.A., Hughes, T.P., Jones, G.P., and Menge, B.A. (1996) Recruitment and the local dynamics of open marine populations. Annual Review of Ecology and Systematics, 27. pp. 477-500.

Jones, G.P., Kaly, U.L., and Clements, K. (1991) Preliminary records of the coral reef fishes of Tuvalu. South Pacific Journal of Natural Science, 11. pp. 40-57.