Article

Nowland, Samantha J., Jerry, Dean R., and Southgate, Paul C. (2015) A non-destructive tissue sampling technique for holothurians to facilitate extraction of DNA for genetic analysis. Invertebrate Biology, 134 (3). pp. 252-259.

Carter, Alex B., Carton, Alexander G., McCormick, Mark I., Tobin, Andrew J., and Williams, Ashley J. (2015) Maternal size, not age, influences egg quality of a wild, protogynous coral reef fish Plectropomus leopardus. Marine Ecology Progress Series, 529. pp. 249-263.

Basiita, Rose K., Zenger, Kyall R., Mwanja, Matthew T., and Jerry, Dean R. (2015) Development of genome-wide microsatellite genetic resources in a commercially important African freshwater fish species – the Nile perch, Lates niloticus. Animal Genetics, 46 (3). p. 340.

Budd, Alyssa M., Banh, Quyen Q., Domingos, Jose A., and Jerry, Dean R. (2015) Sex control in fish: approaches, challenges and opportunities for aquaculture. Journal of Marine Science and Engineering, 3 (2). jmse3020329. pp. 329-355.

Podgorniak, Tomasz, Milan, Massimo, Pujolar, Jose Marti, Maes, Gregory E., Bargelloni, Luca, De Oliveira, Eric, Pierron, Fabien, and Daverat, Francoise (2015) Differences in brain gene transcription profiles advocate for an important role of cognitive function in upstream migration and water obstacles crossing in European eel. BMC Genomics, 16. 378. pp. 1-10.

Hunt, D.E, Rawlinson, N.J.F., Thomas, G.A., and Cobcroft, J.M. (2015) Investigating photoreceptor densities, potential visual acuity, and cone mosaics of shallow water, temperate fish species. Vision Research, 111 (Part A). pp. 13-21.

Vilas, Román, Vandamme, Sara G., Vera, Manuel, Bouza, Carmen, Maes, Gregory E., Volckaert, Filip A.P., and Martínez, Paulino (2015) A genome scan for candidate genes involved in the adaptation of turbot (Scophthalmus maximus). Marine Genomics, 23. pp. 77-86.

Diopere, Eveline, Maes, Gregory E., Komen, Hans, Volckaert, Filip A.M., and Groenen, Martien A.M. (2014) A genetic linkage map of sole (Solea solea): a tool for evolutionary and comparative analyses of exploited (flat) fishes. PLoS ONE, 9 (12). e115040. pp. 1-16.

Sharp, Michael F., Kamath, Sandip D., Koeberl, Martina, Jerry, Dean R., O'Hehir, Robyn E., Campbell, Dianne E., and Lopata, Andreas L. (2014) Differential IgE binding to isoallergens from Asian seabass (Lates calcarifer) in children and adults. Molecular Immunology, 62 (1). pp. 77-85.

Wakefield, Corey B., Williams, Ashley, Newman, Steve J., Bunel, Melanie, Dowling, Christopher E., Armstrong, Chella A., and Langlois, Tim J. (2014) Rapid and reliable multivariate discrimination for two cryptic Eteline snappers using otolith morphometry. Fisheries Research , 151. pp. 100-106.

Cooke , Steven J., Messmer, Vanessa, Tobin, Andrew J., Pratchett, Morgan S., and Clark, Timothy D. (2014) Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish flag snapper (Lutjanus carponotatus) on the Great Barrier Reef. Physiological and Biochemical Zoology, 87 (1). pp. 136-147.

Noble, T.H., Smith-Keune, C., and Jerry, D.R. (2014) Genetic investigation of the large-scale escape of a tropical fish, barramundi Lates calcarifer, from a sea-cage facility in northern Australia. Aquaculture Environment Interactions, 5 (2). pp. 173-183.

Geraghty, Pascal T., Williamson, Jane E., Macbeth, William G., Wintner, Sabine P., Harry, Alastair V., Ovenden, Jennifer R., and Gillings, Michael R. (2013) Population expansion and genetic structure in Carcharhinus brevipinna in the southern Indo-Pacific. PLoS ONE, 8 (9). e75169. pp. 1-18.

Diopere, Eveline, Hellemans, Bart, Volckaert, Filip A.M., and Maes, Gregory E. (2013) Identification and validation of single nucleotide polymorphisms in growth- and maturation-related candidate genes in sole (Solea solea L.). Marine Genomics, 9. pp. 33-38.

Olaganathan, Rajee, and Patterson, Jamila (2013) Effect of anthraquinone dyes on the carbohydrate, protein and lipid content in the muscle of Channa punctatus and Cyprinus carpio. International Journal of Pharmaceutical Applications, 4 (1). pp. 11-19.

Collins, Geoffrey M., Clark, Timothy D., Rummer, Jodie L., and Carton, Alexander G. (2013) Hypoxia tolerance is conserved across genetically distinct sub-populations of an iconic, tropical Australian teleost (Lates calcarifer). Conservation Physiology, 1 (1). pp. 1-9.

Macdonald, Jed I., Farley, Jessica H., Clear, Naomi P., Williams, Ashley J., Carter, Thor I., Davies, Campbell R., and Nicol, Simon J. (2013) Insights into mixing and movement of South Pacific albacore Thunnus alalunga derived from trace elements in otoliths. Fisheries Research, 148. pp. 56-63.

de Santis, Christian, B. Gomes, Giana, and Jerry, Dean R. (2012) Abundance of myostatin gene transcripts and their correlation with muscle hypertrophy during the development of barramundi, Lates calcarifer. Comparative Biochemistry and Physiology-Part B: biochemistry & molecular biology, 163 (1). pp. 101-107.

Newton, J.R., De Santis, C., and Jerry, D.R. (2012) The gene expression response of the catadromous perciform barramundi Lates calcarifer to an acute heat stress. Journal of Fish Biology, 81 (1). pp. 81-93.

Nielsen, Einar E., Cariani, Alessia, Aoidh, Eion Mac, Maes, Gregory E., Milano, Ilaria, Ogden, Rob, Taylor, Martin, Hemmer-Hansen, Jakob, Babbucci, Massimiliano, Bargelloni, Luca, Bekkevold, Dorte, Diopere, Eveline, Grenfell, Leonie, Helyar, Sarah, Limborg, Morten T., Martinsohn, Jann T., McEwing, Ross, Panitz, Frank, Patarnello, Tomaso, Tinti, Fausto, Van Houdt, Jeroen K.J., Volckaert, Filip A.M., Waples, Robin S., FishPop Trace Consortium, and Carvalho, Gary R. (2012) Gene-associated markers provide tools for tackling illegal fishing and false eco-certification. Nature Communications, 3 (5). 851. pp. 1-6.

Morgan, Jess A.T., Harry, Alastair V., Welch, David J., Street, Raewyn, White, Jimmy, Geraghty, Pascal T., Macbeth, William G., Tobin, Andrew, Simpfendorfer, Colin A., and Ovenden, Jennifer R. (2012) Detection of interspecies hybridisation in Chondrichthyes: hybrids and hybrid offspring between Australian (Carcharhinus tilstoni) and common (C. limbatus) blacktip shark found in an Australian fishery. Conservation Genetics, 13 (2). pp. 455-463.

Jerry, Dean R., Kvingedal, Renate, Lind, Curtis E., Evans, Brad S., Taylor, Joseph J.U., and Safari, Alex E. (2012) Donor-oyster derived heritability estimates and the effect of genotype × environment interaction on the production of pearl quality traits in the silver-lip pearl oyster, Pinctada maxima. Aquaculture, 338-341. pp. 66-71.

Lelievre, Stephanie, Jerome, Marc, Maes, Gregory E., Vaz, Sandrine, Calaivany, Sachidhanandam, and Verrez-Bagnis, Veronique (2012) Integrating molecular identification of pelagic eggs with geostatistical mapping to improve the delineation of North Sea fish spawning grounds. Marine Ecology Progress Series, 445. pp. 161-172.

A'Hara, S.W., Amouroux, P., Argo, Emily E., Avand-Faghih, A., Barat, Ashoktaru, Barbieri, Luiz, Bert, Theresa M., Blatrix, R., Blin, Aurélie, Bouktila, D., Broome, A., Burban, C., Capdevielle-Dulac, C., Casse, N., Chandra, Suresh, Cho, Kyung Jin, Cottrell, J.E., Crawford, Charles R., Davis, Michelle C., Delatte, H., Desneux, Nicholas, Djieto-Lordon, C., Dubois, M.P., El-Mergawy, R.A.A.M., Gallardo-Escárate, C., Garcia, M., Gardner, Mary M., Guillemaud, Thomas, Haye, P.A., Hellemans, B., Hinrichsen, P., Jeon, Ji Hyun, Kerdelhué, C., Kharrat, I., Kim, Ki Hwan, Kim, Yong Yul, Kwan, Ye-Seul, Labbe, Ellen M., LaHood, Eric, Lee, Kyung Mi, Lee, Wan-Ok, Lee, Yat-Hung, Legoff, Isabelle, Li, H., Lin, Chung-Ping, Liu, S.S., Liu, Y.G., Long, D., Maes, G.E., Magnoux, E., Mahanta, Prabin Chnadra Mahanta, Makni, H., Makni, M., Malausa, Thibaut, Matura, Rakesh, McKey, D., McMillen-Jackson, Anne L., Méndez, M.A., Mezghani-Khemakhem, M., Michel, Andy P., Moran, Paul, Muriel-Cunha, Janice, Nibouche, S., Normand, F., Palkovacs, Eric P., Pande, Veena, Parmentier, K., Peccoud, J., Paitscheck, F., Puchulutegui, Cecilia, Ramos, R., Ravest, G., Richner, Heinz, Robbens, J., Rochat, D., Rousselet, J., Saladin, Verena, Sauve, M., Schlei, Ora, Schultz, Thomas F., Scobie, A.R., Segovia, N.I., Seyoum, Seifu, Silvain, J-F., Tabone, Elisabeth, Van Houdt, J.K.J., Van Damme, S.G., Volckaert, F.A.M., Wenburg, John, Willis, Theodore V., Won, Yong-Jin, Ye, N.H., Zhang, W., and Zhang, Y.X. (2012) Permanent genetic resources added to Molecular Ecology Resources Database 1 August 2011-30 September 2011. Molecular Ecology Resources, 12 (1). pp. 185-189.

Boukouvala, Evridiki, Cariani, Alessia, Maes, Gregory E., Sevilla, Rafael G., Verrez-Bagnis, Veronique, Jerome, Marc, Guarniero, Ilaria, Monios, Georgios, Tinti, Fausto, Volckaert, Filip A.M., Bautista, Jose M., and Krey, Grigorios (2012) Restriction fragment length analysis of the cytochrome b gene and muscle fatty acid composition differentiate the cryptic flatfish species Solea solea and Solea aegyptiaca. Journal of Agricultural and Food Chemistry, 60 (32). pp. 7941-7948.

Edmunds, Richard C., Smith-Keune, Carolyn, Van Herwerden, Lynne, Fulton, Chris J., and Jerry, Dean R. (2012) Exposing local adaptation: synergistic stressors elicit population-specific lactate dehydrogenase-B (ldh-b) expression profiles in Australian barramundi, Lates calcarifer. Aquatic Sciences, 74 (1). pp. 171-178.

Guitreau, Amy M., Eilts, Bruce E., Novelo, Noel D., and Tiersch, Terrence R. (2012) Fish handling and ultrasound procedures for viewing the ovary of submersed, nonanesthetized, unrestrained channel catfish. North American Journal of Aquaculture, 74 (2). pp. 182-187.

Weakley, J.C., Claiborne, J.B., Hyndman, K.A., and Edwards, S.L. (2012) The effect of environmental salinity on H+ efflux in the euryhaline barramundi (Lates calcarifer). Aquaculture, 338-341. pp. 190-196.

Bernatchez, Louis, St-Cyr, Jérôme, Normandeau, Eric, Maes, Gregory E., Als, Thomas D., Kalujnaia, Svetlana, Cramb, Gordon, Castonguay, Martin, and Hansen, Michael M. (2011) Differential timing of gene expression regulation between leptocephali of the two Anguilla eel species in the Sargasso Sea. Ecology and Evolution, 1 (4). pp. 459-467.

Milano, Ilaria, Babbucci, Massimiliano, Panitz, Frank, Ogden, Rob, Nielsen, Rasmus O., Taylor, Martin I., Helyar, Sarah J., Carvalho, Gary R., Espiñeira, Montserrat, Atanassova, Miroslava, Tinti, Fausto, Maes, Gregory E., Patarnello, Tomaso, FishPop Trace Consortium, and Bargelloni, Luca (2011) Novel tools for conservation genomics: comparing two high-throughput approaches for SNP discovery in the transcriptome of the European hake. PLoS ONE, 6 (11). e28008. pp. 1-13.

Shaddick, K., Burridge, C.P., Jerry, D.R., Schwartz, T.S., Truong, K., Gilligan, D.M., and Beheregaray, L.B. (2011) A hybrid zone and bidirectional introgression between two catadromous species: Australian bass Macquaria novemaculeata and estuary perch Macquaria colonorum. Journal of Fish Biology, 79 (5). pp. 1214-1235.

Broderick, D., Ovenden, J.R., Buckworth, R.C., Newman, S.J., Lester, R.J.G., and Welch, D.J. (2011) Genetic population structure of grey mackerel Scomberomorus semifasciatus in northern Australia. Journal of Fish Biology, 79 (3). pp. 633-661.

Als, Thomas D., Hansen, Michael M., Maes, Gregory E., Castonguay, Martin, Riemann, Lasse, Aarestrup, Kim, Munk, Peter, Sparholt, Henrik, Hanel, Reinhold, and Bernatchez, Louis (2011) All roads lead to home: panmixia of European eel in the Sargasso Sea. Molecular Ecology, 20 (7). pp. 1333-1346.

Schaerlaekens, Dirk G., Dekker, Willem, Wickström, Håkan, Volckaert, Filip A.M., and Maes, Gregory E. (2011) Extracting a century of preserved molecular and population demographic data from archived otoliths in the endangered European eel (Anguilla anguilla L.). Journal of Experimental Marine Biology and Ecology, 398 (1-2). pp. 56-62.

Jenkins, Jill A., Eilts, Bruce E., Guitreau, Amy M., Figiel, Chester R., Draugelis-Dale, Rassa O., and Tiersch, Terrence R. (2011) Sperm quality assessments for endangered razorback suckers Xyrauchen texanus. Reproduction, 141 (1). pp. 55-65.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) Protein and energy utilization and the requirements for maintenance in juvenile mulloway (Argyrosomus japonicus). Fish Physiology and Biochemistry, 36 (1). pp. 109-121.

Coppe, Alessandro, Pujolar, Jose Martin, Maes, Gregory E., Larsen, Peter F., Hansen, Michael M., Bernatchez, Louis, Zane, Lorenzo, and Bortoluzzi, Stefania (2010) Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered european eel. BMC Genomics, 11. 635. pp. 1-13.

Newton, James R., Smith-Keune, Carolyn, and Jerry, Dean R. (2010) Thermal tolerance varies in tropical and sub-tropical populations of barramundi (Lates calcarifer) consistent with local adaptation. Aquaculture, 308 (Supplement 1). S128-S132.

Pirozzi, Igor, and Booth, Mark A. (2009) The effect of temperature and body weight on the routine metabolic rate and postprandial metabolic response in mulloway, Argyrosomus japonicus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 154 (1). pp. 110-118.

Cuveliers, E.L., Bolle, L.J., Volckaert, F.A.M., and Maes, G.E. (2009) Influence of DNA isolation from historical otoliths on nuclear–mitochondrial marker amplification and age determination in an overexploited fish, the common sole (Solea solea L.). Molecular Ecology Resources, 9 (3). pp. 725-732.

Fauvelot, C., Smith-Keune, C., Jerry, D.R., Buston, P.M., and Planes, S. (2009) Isolation and characterization of 16 microsatellite loci in the humbug damselfish, Dascyllus aruanus (family Pomacentridae). Molecular Ecology Resources, 9 (2). pp. 651-653.

Raeymaekers, Joost A.M., Maes, Gregory E., Geldof, Sarah, Hontis, Ingrid, Nackaerts, Kris, and Volckaert, Filip A.M. (2008) Modeling genetic connectivity in sticklebacks as a guideline for river restoration. Evolutionary Applications, 1 (3). pp. 475-488.

Mapleston, Amos, Welch, David, Begg, Gavin A., McLennan, Mark, Mayer, David, and Brown, Ian (2008) Effect of changes in hook pattern and size on catch rate, hooking location, injury and bleeding for a number of tropical reef fish species. Fisheries Research, 91 (2-3). pp. 203-211.

Evans, R.D., Russ, G.R., and Kritzer, J.P. (2008) Batch fecundity of Lutjanus carponotatus (Lutjanidae) and implications of no-take marine reserves on the Great Barrier Reef, Australia. Coral Reefs, 27 (1). pp. 179-189.

Jones, David, Jerry, Dean, McCormick, Mark, and Bay, Line (2008) Development of nine microsatellite markers for Pomacentrus amboinensis. Molecular Ecology Resources, 8 (6). pp. 1332-1334.

Chidlow, Justin A., Simpfendorfer, Colin A., and Russ, Garry R. (2007) Variable growth band deposition leads to age and growth uncertainty in the western wobbegong shark, Orectolobus hutchinsi. Marine and Freshwater Research, 58 (9). pp. 856-865.

Williams, A.J., Mapstone, B.D., and Davies, C.R. (2007) Spatial and interannual patterns in growth of an exploited coral-reef fish. Journal of Fish Biology, 71 (4). pp. 970-992.

Little, L.R., Punt, A.E., Mapstone, Bruce, Pantus, F., Smith, A.D.M., Davies, C.R., and McDonald, A.D. (2007) ELFSim — a model for evaluating management options for spatially structured reef fish populations: an illustration of the “larval subsidy” effect. Ecological Modelling, 205 (3-4). pp. 381-396.

Martínez-Fernández, Erika, and Southgate, Paul C. (2007) Use of tropical microalgae as food for larvae of the black-lip pearl oyster Pinctada margaritifera. Aquaculture, 263 (1-4). pp. 220-226.

Marriott, R.J., Mapstone, B.D., and Begg, G.A. (2007) Age-specific demographic parameters, and their implications for management of the red bass, Lutjanus bohar (Forsskal 1775): a large, long-lived reef fish. Fisheries Research, 83 (2-3). pp. 204-215.

Markey, Kathryn L., Baird, Andrew H., Humphrey, Craig, and Negri, Andrew P. (2007) Insecticides and a fungicide affect multiple coral life stages. Marine Ecology Progress Series, 330. pp. 127-137.

Pujolar, J.M., Maes, G.E., Vancoillie, C., and Volckaert, F.A.M. (2006) Environmental stress and life-stage dependence on the detection of heterozygosity–fitness correlations in the European eel, Anguilla anguilla. Genome, 49 (11). pp. 1428-1437.

Maes, G.E., Raeymaekers, J.A.M., Pampoulie, C., Seynaeve, A., Goemans, G., Belpaire, C., and Volckaert, F.A.M. (2005) The catadromous European eel Anguilla anguilla (L.) as a model for freshwater evolutionary ecotoxicology: relationship between heavy metal bioaccumulation, condition and genetic variability. Aquatic Toxicology, 73 (1). pp. 99-114.

Pujolar, J.M., Maes, G.E., Vancoillie, C., and Volckaert, F.A.M. (2005) Growth rate correlates to individual heterozygosity in the european eel, Anguilla anguilla L. Evolution, 59 (1). pp. 189-199.

Pujolar, J.M., Maes, G.E., and Volckaert, F.A.M. (2004) Distribution of genetic variation in farmed and natural stocks of European eel. Journal of Fish Biology, 65 (Supplement s1). pp. 333-334.

Jerry, D. R., Preston, N., Crocos, P. J., Keys, S., Meadows, J. R. S., and Li, Y. (2004) Parentage determination of Kuruma prawn shrimp Penaeus (Marsupenaeus) japonicus using microsatellite markers. Aquaculture, 235 (1-4). pp. 237-247.

Owens, Leigh, McElnea, Catriona, Snape, Natale, Harris, Lachlan, and Smith, Malcolm (2003) Prevalence and effect of spawner-isolated mortality virus on the hatchery phases of Penaeus monodon and P. merguiensis in Australia. Diseases of Aquatic Organisms, 53 (2). pp. 101-106.

Cobcroft, J.M., and Pankhurst, P.M. (2003) Sensory organ development in cultured striped trumpeter larvae Latris lineata: implications for feeding behaviour. Marine and Freshwater Research, 54 (5). pp. 669-682.

Claiborne, James B., Edwards, Susan L., and Morrison-Shetlar, Alison I. (2002) Acid-base regulation in fishes: cellular and molecular mechanisms. Journal of Experimental Zoology, 293 (3). pp. 302-319.

Fulton, Christopher J., and Bellwood, David R. (2002) Ontogenetic habitat use in labrid fishes: an ecomorphological perspective. Marine Ecology Progress Series, 236. pp. 255-262.

Cimino, Elizabeth J., Owens, Leigh, Bromage, Erin, and Anderson, Trevor A. (2002) A newly developed ELISA showing the effect of environmental stress on levels of hsp86 in Cherax quadricarinatus and Penaeus monodon. Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology, 132 (3). pp. 591-598.

Cobcroft, J.M., Pankhurst, P.M., Hart, P.R., and Battalene, S.C. (2001) The effects of light intensity and algae-induced turbidity on feeding behaviour of larval striped trumpeter. Journal of Fish Biology, 59 (5). pp. 1181-1197.

Roper, K.G., Owens, L., and West, L. (2001) The media used in primary cell cultures of prawn tissues: a review and a comparative study. Asian Fisheries Science, 14 (1). pp. 61-75.

Nankervis, L., Matthews, S.J., and Appleford, P. (2000) Effect of dietary non-protein energy source on growth, nutrient retention and circulating insulin-like growth factor I and triiodothyronine levels in juvenile barramundi, Lates calcarifer. Aquaculture, 191 (4). pp. 323-335.

Norton, John H., Lucas, John S., Turner, Ian, Mayer, Robert J., and Newnham, Raymond (2000) Approaches to improve cultured pearl formation in Pinctada margaritifera through use of relaxation, antiseptic application and incision closure during bead insertion. Aquaculture, 184 (1-2). pp. 1-17.

Sutton, Stephen G., Bult, Tammo P., and Haedrich, Richard L. (2000) Relationships among fat weight, body weight, water weight, and condition factors in wild Atlantic salmon parr. Transactions of the American Fisheries Society, 129 (2). pp. 527-538.

Frisch, A.J., and Anderson, T.A. (2000) The response of coral trout (Plectropomus leopardus) to capture, handling and transport and shallow water stress. Fish Physiology and Biochemistry, 23 (1). pp. 23-34.

Knauer, J., Barrett, S.M., Volkman, J.K., and Southgate, P.C. (1999) Assimilation of dietary phytosterols by Pacific oyster Crassostrea gigas spat. Aquaculture Nutrition, 5 (4). pp. 257-266.

Yukihira, H., Klumpp, D.W., and Lucas, J.S. (1999) Feeding adaptations of the pearl oysters Pinctada margaritifera and P. maxima to variations in natural particulates. Marine Ecology Progress Series, 182. pp. 161-173.

Doroudi, Mehdi S., Southgate, Paul C., and Mayer, Robert J. (1999) Growth and survival of blacklip pearl oyster larvae fed different densities of microalgae. Aquaculture International, 7 (3). pp. 179-187.

Doroudi, M.S., Southgate, P.C., and Mayer, R.J. (1999) The combined effects of temperature and salinity on embryos and larvae of the black-lip pearl oyster, Pinctada margaritifera (L.). Aquaculture Research, 30 (4). pp. 271-277.

Partridge, G.J., and Southgate, P.C. (1999) The effect of binder composition on ingestion and assimilation of microbound diets (MBD) by barramundi Lates calcarifer Bloch larvae. Aquaculture Research, 30 (11-12). pp. 879-886.

Southgate, Paul C., and Kavanagh, Kathryn (1999) The effect of dietary n-3 highly unsaturated fatty acids on growth, survival and biochemical composition of the coral reef damselfish Acanthochromis polyacanthus. Aquatic Living Resources, 12 (1). pp. 31-36.

Collins, A.L., and Anderson, T.A. (1999) The role of food availability in regulating reproductive development in female golden perch. Journal of Fish Biology, 55 (1). pp. 94-104.

Book Chapter

Maes, Gregory E., Pujolar, Marti, and Volckaert, Filip (2009) Evolutionary consequences of eel migration. In: van den Thillart, Guido, Dufour, Sylvie, and Rankin, J. Cliff, (eds.) Spawning Migration of the European Eel: reproduction index, a useful tool for conservation management. Fish and Fisheries Series, 30 . Springer, pp. 401-432.

Wada, Katsuhiko T., and Jerry, Dean R. (2008) Population genetics and stock improvement. In: Southgate, Paul C., and Lucs, John S., (eds.) The Pearl Oyster. Elsevier, Oxford, UK, pp. 437-471.

Thesis

Budd, Alyssa (2020) Epigenetic effects of temperature on sex change in barramundi, Lates calcarifer. PhD thesis, James Cook University.

Banh, Thi Quyen Quyen (2019) Sex differentiation of barramundi lates calcarifer – understanding male sexual development and its manipulation through exogenous steroids and non-steroidal aromatase inhibitor. PhD thesis, James Cook University.

Noble, Tansyn Honi (2018) Selective breeding for tolerance to gill-associated virus in the black tiger shrimp, Penaeus monodon. PhD thesis, James Cook University.

Collins, Geoffrey M. (2016) Phenotypic drivers of hypoxia tolerance in a tropical diadromous fish (Lates calcarifer). PhD thesis, James Cook University.

Domingos, Jose A.S. (2014) Filling in the gaps impeding the instigation of selective breeding programs in barramundi Lates calcarifer: fate of genetic diversity through to harvest, estimation of genetic parameters and early prediction of family growth based on cellular processes. PhD thesis, James Cook University.

Botte, Emmanuelle (2011) Effects of pesticide exposure and thermal stress in a model tropical reef fish, the damselfish Acanthochromis polyacanthus. PhD thesis, James Cook University.

Horne, John Barton (2011) Evolutionary and ecological genetic patterns of widespread unicornfishes: investigations of the non-geographic clades phenomenon. PhD thesis, James Cook University.

McGinty, Erin Louise (2011) Genetic contribution to pearl formation. PhD thesis, James Cook University.

Ballagh, Debra Anne (2011) Intensive rearing techniques and feeding behaviour of larval and juvenile mulloway, Argyrosomus japonicus. PhD thesis, James Cook University.

De Santis, Christian (2011) Regulation of growth: understanding the myostatin functioning in two important aquaculture species, barramundi (Lates calcarifer) and black tiger shrimp (Penaeus monodon). PhD thesis, James Cook University.

Schroeder, Ron (2011) Utilisation of vertebral microchemistry techniques to determine population structure of two inshore shark species along the east coast of Queensland, Australia. Masters (Research) thesis, James Cook University.

Evans, Richard (2009) No-take marine protected areas: abundance, biomass, batch fecundity and genetic connectivity of target species on the Great Barrier Reef. PhD thesis, James Cook University.

Pirozzi, Igor (2009) A factorial approach to defining the dietary protein and energy requirements of mulloway, Argyrosomus japonicus : optimising feed formulations and feeding strategies. PhD thesis, James Cook University.

Martínez-Fernández, Erika (2007) Use of tropical microalgae species as food for pearl oyster (Pinctada margaritifera L.) larvae. PhD thesis, James Cook University.

Lloyd, Julie Anne (2006) Demography of Pristipomoides multidens in northern Australia and a comparison within the Family Lutjanidae with respect to depth. PhD thesis, James Cook University.

Kassahn, Karin Sonja (2006) A microarray approach to understanding stress in a coral reef fish. PhD thesis, James Cook University.

Konow, Nicolai (2005) Feeding ecomorphology in angelfishes, f. Pomacanthidae: the implications of functional innovations on prey-dislodgement in biting reef fishes. PhD thesis, James Cook University.

Matthews, Sue Janet (1997) The regulation of insulin-like growth factors in barramundi, Lates calcarifer. PhD thesis, James Cook University.