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Karthikeyan, Obuli P., and Visvanathan, C. (2013) Bio-energy recovery from high-solid organic substrates by dry anaerobic bio-conversion processes: a review. Reviews in Environmental Science and Biotechnology, 12 (3). pp. 257-284.

Perkins, G.C., Kutt, A.S., Vanderduys, E.P., and Perry, J.J. (2013) Evaluating the costs and sampling adequacy of a vertebrate monitoring program. Australian Zoologist, 36 (3). pp. 373-380.

Ziembicki, M.R., Woinarski, J.C.Z., and Mackey, B. (2013) Evaluating the status of species using Indigenous knowledge: novel evidence for major native mammal declines in northern Australia. Biological Conservation, 157. pp. 78-92.

Iwamura, Takuya, Possingham, Hugh P., Chadès, Iadine, Minton, Clive, Murray, Nicholas J., Rogers, Danny I., Treml, Eric A., and Fuller, Richard A. (2013) Migratory connectivity magnifies the consequences of habitat loss from sea-level rise for shorebird populations. Tohoku Journal of Experimental Medicine, 230 (1761). 20130325.

Joyce, Karen E., and Phinn, Stuart R. (2013) Spectral index development for mapping live coral cover. Journal of Applied Remote Sensing, 7 (1). 073590. pp. 1-20.

Gooch, Margaret, Vella, Karen, Marshall, Nadine, Tobin, Renae, and Pears, Rachel (2013) A rapid assessment of the effects of extreme weather on two Great Barrier Reef industries. Australian Planner, 50 (3). pp. 198-215.

Nguyen, Hai-Hoa , McAlpine, Clive, Pullar, David, Johansen, Kasper, and Duke, Norman C. (2013) The relationship of spatial-temporal changes in fringe mangrove extent and adjacent land-use: case study of Kien Giang coast, Vietnam. Ocean & Coastal Management, 76. pp. 12-22.

Dunn, Ryan J.K., Welsh, David T., Jordan, Mark A., Waltham, Nathan J., Lemckert, Charles J., and Teasdale, Peter R. (2012) Benthic metabolism and nitrogen dynamics in a sub-tropical coastal lagoon: microphytobenthos stimulate nitrification and nitrate reduction through photosynthetic oxygen evolution. Estuarine, Coastal and Shelf Science , 113. pp. 272-282.

Garcia-Ulloa, John, Sloan, Sean, Pacheco, Pablo, Ghazoul, Jaboury, and Koh, Lian Pin (2012) Lowering environmental costs of oil-palm expansion in Colombia. Conservation Letters, 5 (5). pp. 366-375.

O'Brien, Dominique, Komarova, Tatiana, and Mueller, Jochen F. (2012) Determination of deployment specific chemical uptake rates for SPMD and PDMS using a passive flow monitor. Marine Pollution Bulletin, 64 (5). pp. 1005-1011.

Yuen, J.Q., Olin, P.H., Lim, H.S., Benner, S.G., Sutherland, R.A., and Ziegler, A.D. (2012) Accumulation of potentially toxic elements in road deposited sediments in residential and light industrial neighborhoods of Singapore. Journal of Environmental Management, 101. pp. 151-163.

Bass, Adrian M., Bird, Michael I., Morrison, Marshall J., and Gordon, Jeremy (2012) CADICA: Continuous Automated Dissolved Inorganic Carbon Analyzer with application to aquatic carbon cycle science. Limnology and Oceanography: Methods, 10. pp. 10-19.

Carranza, Alvar, Munoz Recio, Araceli, Kitahara, Marcelo, Scarabino, Fabrizio, Ortega, Leonardo, Lopez, Guzman, Franco-Fraguas, Paula, De Mello, Camila, Acosta, Juan, and Fontan, Antia (2012) Deep-water coral reefs from the Uruguayan outer shelf and slope. Marine Biodiversity, 42 (3). pp. 411-414.

Zeshan, Karthikeyan, Obuli, and Visvanathan, Chettiyappan (2012) Effect of C/N ratio and ammonia-N accumulation in a pilot-scale thermophilic dry anaerobic digester. Bioresource Technology, 113. pp. 294-302.

Collier, C.J., Waycott, M., and McKenzie, L.J. (2012) Light thresholds derived from seagrass loss in the coastal zone of the northern Great Barrier Reef, Australia. Ecological Indicators, 23. pp. 211-219.

Nakamura, Koh, Denda, Tetsuo, Kokubugata, Goro, Forster, Paul I., Wilson, Gary, Peng, Ching-I, and Yokota, Masatsugu (2012) Molecular phylogeography reveals an antitropical distribution and local diversification of Solenogyne (Asteraceae) in the Ryukyu Archipelago of Japan and Australia. Biological Journal of the Linnean Society, 105 (1). pp. 197-217.

Woinarski, J.C.Z., Fisher, A., Armstrong, M., Brennan, K., Griffiths, A.D., Hill, B., Low Choy, J., Milne, D., Stewart, A., Young, S., Ward, S., Winderlich, S., and Ziembicki, M. (2012) Monitoring indicates greater resilience for birds than for mammals in Kakadu National Park, northern Australia. Wildlife Research, 39 (5). pp. 397-407.

Collier, Catherine J., Waycott, Michelle, and Ospina, Ana Giraldo (2012) Responses of four Indo-West Pacific seagrass species to shading. Marine Pollution Bulletin, 65 (4-9). pp. 342-354.

Unsworth, Richard K.F., Rasheed, Michael A., Chartrand, Kathryn M., and Roelofs, Anthony J. (2012) Solar radiation and tidal exposure as environmental drivers of Enhalus acoroides dominated seagrass meadows. PLoS One, 7 (3). e34133. pp. 1-8.

Novoa, Stefani, Chust, Guillem, Froidefond, Jean M., Petus, Caroline, Franco, Javier, Orive, Emma, Seoane, Sergio, and Borja, Angel (2012) Water quality monitoring in Basque coastal areas using local chlorophyll-a algorithm and MERIS images. Journal of Applied Remote Sensing, 6 (1). 063519. pp. 1-27.

Kennedy, Karen, Devlin, Michelle, Bentley, Christie, Lee-Chue, Kristie, Paxman, Chris, Carter, Steve, Lewis, Stephen, Brodie, Jon, Guy, Ellia, Vardy, Suzanne, Martin, Katherine C., Jones, Alison, Packett, Robert, and Mueller, Jochen F. (2012) The influence of a season of extreme wet weather events on exposure of the World Heritage Area Great Barrier Reef to pesticides. Marine Pollution Bulletin, 64 (7). pp. 1495-1507.

Rivier, Aurélie, Gohin, Francis, Bryére, Philippe, Petus, Caroline, Guillou, Nicolas, and Chapalain, Georges (2011) Observed vs. predicted variability in non-algal suspended particulate matter concentration in the English Channel in relation to tides and waves. Geo-Marine Letters, 32 (2). pp. 139-151.

Perry, C.T., Smithers, S.G., Roche, R.C., and Wassenburg, J. (2011) Recurrent patterns of coral community and sediment facies development through successive phases of Holocene inner-shelf reef growth and decline. Marine Geology, 289 (1-4). pp. 60-71.

Collier, Neil, Campbell, Bruce M., Sandker, Marieke, Garnett, Stephen T., Sayer, Jeffrey, and Boedhihartono, Agni Klintuni (2011) Science for action: the use of scoping models in conservation and development. Environmental Science & Policy, 14 (6). pp. 628-638.

Ceccarelli, Daniela, Beger, Maria, Kospartov, Marie, Richards, Zoe, and Birrell, Chico (2011) Population trends of remote invertebrate resources in a marine reserve: trochus and holothurians at Ashmore Reef. Pacific Conservation Biology, 17 (2). pp. 132-140.

O'Brien, Dominique, Bartkow, Michael, and Mueller, Jochen F. (2011) Determination of deployment specific chemical uptake rates for SDB-RPD Empore disk using a passive flow monitor (PFM). Chemosphere, 83 (9). pp. 1290-1295.

O'Brien, Dominique, Hawker, Darryl, Shaw, Melanie, and Mueller, Jochen F. (2011) The performance of passive flow monitors and phosphate accumulating passive samplers when exposed to pulses in external water flow rate and/or external phosphate concentrations. Environmental Pollution, 159 (5). pp. 1435-1441.

Venkatraman, Kartik , Ashwath, Nanjappa , and Su, Ninghu (2011) Predicting the site water balance of a phytocapped landfill using HYDRUS 1D. International Journal of Environmental Technology and Management, 14 (1-4). pp. 269-281.

Rasheed, Michael A., and Unsworth, Richard K.F. (2011) Long-term climate-associated dynamics of a tropical seagrass meadow: implications for the future. Marine Ecology Progress Series, 422. pp. 93-103.

Wakelin, Steven A., Nelson, Paul N., Armour, John D., Rasiah, Vellupillai, and Colloff, Matthew J. (2011) Bacterial community structure and denitrifier (nir-gene) abundance in soil water and groundwater beneath agricultural land in tropical North Queensland, Australia. Soil Research, 49 (1). pp. 65-76.

Awruch, C.A., Simpfendorfer, C., and Pankhurst, N.W. (2011) Evaluation and use of a portable field kit for measuring whole-blood lactate in sharks. Marine and Freshwater Research, 62 (6). pp. 694-699.

Taylor, Helen, and Rasheed, Michael (2011) Impacts of a fuel oil spill on seagrass meadows in a subtropical port, Gladstone, Australia: the value of long-term marine habitat monitoring in high risk areas. Marine Pollution Bulletin, 63 (5-12). pp. 431-437.

Sandker, Marieke, Bokoto-de Semboli, Bruno, Roth, Philipp, Péllisier, Cyril, Ruiz-Pérez, Manuel, Sayer, Jeff, Turkalo, Andrea K., Omoze, Ferdinand, and Campbell, Bruce M. (2011) Logging or conservation concession: exploring conservation and development outcomes in Dzanga-Sangha, Central African Republic. Conservation and Society, 9 (4). pp. 299-310.

Mackenzie, Jock, Duke, Norman, Baba, Karin, Wood, Apanie, Rogers, Britt, Haller, Alex, and O'Mara, Julian (2011) MangroveWatch Burnett Mary region is one year old: outcomes and lessons learned. Wetlands Australia, National Wetlands Update, 19. pp. 26-27.

O'Brien, Dominique S., Booij, Kees, Hawker, Darryl W., and Mueller, Jochen F. (2011) Method for the in situ calibration of a passive phosphate sampler in estuarine and marine waters. Environmental Science and Technology, 45 (7). pp. 2871-2877.

Swati, M., Karthikeyan, O.P., Joseph, Kurian, Visvanathan, C., and Nagendran, R. (2011) Pilot-scale simulation of landfill bioreactor and controlled dumping of fresh and partially stabilized municipal solid waste in a tropical developing country. Journal of Hazardous, Toxic, and Radioactive Waste, 15 (4). pp. 321-330.

Giri, C., Ochieng, E., Tieszen, L.L., Zhu, Z., Singh, A., Loveland, T., Masek, J., and Duke, N. (2011) Status and distribution of mangrove forests of the world using earth observation satellite data. Global Ecology and Biogeography , 20 (1). pp. 154-159.

Visvanathan, C., Karthikeyan, Obuli P., and Park, K.H. (2011) Sustainable landfilling in tropical conditions: comparison between open and closed cell approach. Waste Management and Research, 29 (4). pp. 386-396.

Smajgl, A, Larson, S., Hug, B., and Martins De Freitas, D.M. (2010) Water use benefit index as a tool for community-based monitoring of water related trends in the Great Barrier Reef region. Journal of Hydrology, 395 (1-2). pp. 1-9.

Lambrechts, J., Humphrey, C., McKinna, L., Gourge, O., Fabricius, K.E., Mehta, A.J., Lewis, S., and Wolanski, E. (2010) Importance of wave-induced bed liquefaction in the fine sediment budget of Cleveland Bay, Great Barrier Reef. Estuarine, Coastal and Shelf Science , 89 (2). pp. 154-162.

Bainbridge, Scott, Steinberg, Craig, and Heron, Mal (2010) Integrating observations: an example from the Great Barrier Reef. Sea Technology, 51 (8). pp. 33-38.

Hoskin, Conrad J. (2010) Breeding behaviour of the Barred Frog Mixophyes coggeri. Memoirs of the Queensland Museum - Nature, 55 (1). pp. 1-7.

Doupe, R.G., and Knott, M.J. (2010) Rapid digestion of fish prey by the highly invasive ‘detritivore’ Oreochromis mossambicus. Journal of Fish Biology, 76 (4). pp. 1019-1024.

Heffernan, Janet, Barry, Jon, Devlin, Michelle, and Fryer, Rob (2010) A simulation tool for designing nutrient monitoring programmes for eutrophication assessments. Environmetrics, 21 (1). pp. 3-20.

Doupe, Robert G., Mitchell, Jim, Knott, Matthew J., Davis, Aaron M., and Lymbery, Alan J. (2010) Efficacy of exclusion fencing to protect ephemeral floodplain lagoon habitats from feral pigs (Sus scrofa). Wetlands Ecology and Management, 18 (1). pp. 69-78.

Doupe, Robert G., Knott, Matthew J., Schaffer, Jason, Burrows, Damien W., and Lymbery, Alan J. (2010) Experimental herbivory of native Australian macrophytes by the introduced Mozambique tilapia Oreochromis mossambicus. Austral Ecology, 35 (1). pp. 24-30.

Myers, Trina S., Atkinson, Ian , and Johnstone, Ron (2010) Supporting coral reef ecosystem research through modelling a re-usable ontology framework. Applied Artificial Intelligence, 24 (1 and 2). pp. 77-101.

Sri Shalini, S., Karthikeyan, Obuli P., and Joseph, Kurian (2010) Biological stability of municipal solid waste from simulated landfills under tropical environment. Bioresource Technology, 101 (3). pp. 845-852.

Perry, J.J., Kutt, A.S., Garnett, S.T., Crowley, G.M., Vanderduys, E.P., and Perkins, G.C. (2010) Changes in the avifauna of Cape York Peninsula over a period of 9 years: the relative effects of fire, vegetation type and climate. Emu, 111 (2). pp. 120-131.

Visvanthan, C., Yin, Nang Htay, and Karthikeyan, Obuli P. (2010) Co-disposal of electronic waste with municipal solid waste in bioreactor landfills. Waste Management, 30 (12). pp. 2608-2614.

Petus, Caroline, Chust, Guillem, Gohin, Francis, Doxaran, David, Froidefond, Jean-Marie, and Sagarminaga, Yolanda (2010) Estimating turbidity and total suspended matter in the Adour River plume (South Bay of Biscay) using MODIS250-m imagery. Continental Shelf Research, 30 (5). pp. 379-392.

Hoskin, Conrad J., and Goosem, Miriam W. (2010) Road impacts on abundance, call traits, and body size of rainforest frogs in northeast Australia. Ecology and Society, 15 (3). 15. pp. 1-16.

Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.

Rajamani, L, and Marsh, H. (2010) Using parallel regional- and local-scale initiatives to inform conservation management of rare wildlife: a case study of the dugong Dugong dugon in Sabah, Malaysia. Endangered Species Research, 13 (1). pp. 17-23.

Moore, Kenneth A., Shields, Erin C., and Jarvis, Jessie C. (2010) The role of habitat and herbivory on the restoration of tidal freshwater submerged aquatic vegetation populations. Restoration Ecology, 18 (4). pp. 596-604.

Jarvis, Jessie C., and Moore, Kenneth A. (2010) The role of seedlings and seed bank viability in the recovery of Chesapeake Bay, USA, Zostera marina populations following a large-scale decline. Hydrobiologia, 649 (1). pp. 55-68.

Chen, Yun, and Gillieson, David (2009) Evaluation of Landsat TM vegetation indices for estimating vegetation cover on semi-arid rangelands – a case study from Australia. Canadian Journal of Remote Sensing, 35 (5). pp. 435-446.

Devlin, Michelle, Barry, Jon, Painting, Suzanne, and Best, Mike (2009) Extending the phytoplankton tool kit for the UK Water Framework Directive: indicators of phytoplankton community structure. Hydrobiologia, 633 (1). pp. 151-168.

Paton, D.C., Rogers, D.J., Hill, B.M., Bailey, C.P., and Ziembicki, M. (2009) Temporal changes to spatially stratified waterbird communities of the Coorong, South Australia: implications for the management of heterogenous wetlands. Animal Conservation, 12 (5). pp. 408-417.

Cooper, T.F., Gilmour, J.P., and Fabricius, K.E. (2009) Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes. Coral Reefs, 28 (3). pp. 589-606.

Lewis, Stephen E., Brodie, Jon E., Bainbridge, Zoe T., Rohde, Ken W., Davis, Aaron M., Masters, Bronwyn L., Maughan, Mirjam, Devlin, Michelle J., Mueller, Jochen F., and Schaffelke, Britta (2009) Herbicides: a new threat to the Great Barrier Reef. Environmental Pollution, 157 (8-9). pp. 2470-2484.

Mustika, Putu Liza Kusuma, Hutasoit, Pariama, Madusari, Cecilia Cicik, Purnomo, Februanty S., Setiawan, Adityo, Tjandra, Katherina, and Prabowo, Walesa Edho (2009) Whale strandings in Indonesia, including the first record of a humpback whale (Megaptera novaeangliae) in the Archipelago. Raffles Bulletin of Zoology, 57 (1). pp. 199-206.

Rowat, David, Gore, Mauvis, Meekan, Mark G., Lawler, Ivan R., and Bradshaw, Corey J.A. (2009) Aerial survey as a tool to estimate whale shark abundance trends. Journal of Experimental Marine Biology and Ecology, 368 (1). pp. 1-8.

Pohlman, Catherine L., Turton, Stephen M., and Goosem, Miriam (2009) Temporal variation in microclimatic edge effects near powerlines, highways and streams in Australian tropical rainforest. Agricultural and Forest Meteorology, 149 (1). pp. 84-95.

Asner, Gregory P., Martin, Roberta E., Ford, Andrew J., Metcalfe, Daniel J., and Liddell, Michael J. (2009) Leaf chemical and spectral diversity in Australian tropical forests. Ecological Applications, 19 (1). pp. 236-253.

Kroon, F.J., and Brodie, J. (2009) Catchment management and health of coastal ecosystems: synthesis and future research. Marine and Freshwater Research, 60 (11). pp. 1196-1200.

Devlin, Michelle, and Schaffelke, Britta (2009) Spatial extent of riverine flood plumes and exposure of marine ecosystems in the Tully coastal region, Great Barrier Reef. Marine and Freshwater Research, 60 (11). pp. 1109-1122.

Brodie, Jon, Lewis, Stephen, Bainbridge, Zoe, Mitchell, Alan, Waterhouse, Jane, and Kroon, Frederieke (2009) Target setting for pollutant discharge management of rivers in the Great Barrier Reef catchment area. Marine and Freshwater Research, 60 (11). pp. 1141-1149.

Doupe, Robert G., Schaffer, Jason, Knott, Matthew J., and Dicky, Paul W. (2009) A description of freshwater turtle habitat destruction by feral pigs in tropical north eastern Australia. Herpetological Conservation and Biology, 4 (3). pp. 331-339.

O'Brien, Dominique Sara, Chiswell, Barry, and Mueller, Jochen F. (2009) A novel method for the in situ calibration of flow effects on a phosphate passive sampler. Journal of Environmental Monitoring, 11 (1). pp. 212-219.

Roberts , David A., Johnston, Emma L., and Poore, Alistair G.B. (2008) Biomonitors and the assessment of ecological impacts: distribution of herbivorous epifauna in contaminated macroalgal beds. Environmental Pollution, 156 (2). pp. 489-503.

Daley, Ben, Griggs, Peter, and Marsh, Helene (2008) Exploiting marine wildlife in Queensland: the commercial dugong and marine turtle fisheries, 1847-1969. Australian Economic History Review, 48 (3). pp. 227-265.

Heupel, Michelle R., Reiss, Katie. L., Yeiser, Beau G., and Simpfendorfer, Colin A. (2008) Effects of biofouling on performance of moored data logging acoustic receivers. Limnology and Oceanography: Methods, 6. pp. 327-335.

Roberts , David A., Johnston, Emma L., and Poore, Alistair G.B. (2008) Contamination of marine biogenic habitats and effects upon associated epifauna. Marine Pollution Bulletin, 56 (6). pp. 1057-1065.

Wilson, Robyn F., Goosem, Miriam W., and Wilson, Gary W. (2008) Resilience of arboreal folivores to habitat damage by a severe tropical cyclone. Austral Ecology, 33 (4). pp. 573-579.

Moore, Nicole J., and Gillieson, David S. (2008) Using field survey and remote sensing to assess rainforest canopy damage following Cyclone Larry. Austral Ecology, 33 (4). pp. 417-431.

Davis, Aaron, Lewis, Stephen, Bainbridge, Zoe, Brodie, Jon, and Shannon , Evan (2008) Pesticide residues in waterways of the lower Burdekin region: challenges in ecotoxicological interpretation of monitoring data. Australasian Journal of Ecotoxicology, 14. pp. 89-108.

Esakku, S., Karthikeyan, O.P., Joseph, Kurian, and Nagendran, R. (2008) Heavy metal fractionation and leachability studies on fresh and partially decomposed municipal solid waste. Practice Periodical of Hazardous, Toxic, and Radioactive Waste Management, 12 (2). pp. 127-132.

Roberts , David A., Johnston, Emma L., Müller, Stefanie, and Poore, Alistair G.B. (2008) Field and laboratory simulations of storm water pulses: behavioural avoidance by marine epifauna. Environmental Pollution, 152 (1). pp. 153-162.

Frostick, A., Bollhöfer, A., Parry, D., Munksgaard, N., and Evans, K. (2008) Radioactive and radiogenic isotopes in sediments from Cooper Creek, Western Arnhem Land. Journal of Environmental Radioactivity, 99 (3). pp. 468-482.

Collier, Catherine J., Lavery, Paul S., Ralph, Peter J., and Masini, Raymond J. (2008) Physiological characteristics of the seagrass Posidonia sinuosa along a depth-related gradient of light availability. Marine Ecology Progress Series, 353. pp. 65-79.

Berger, Uta, Rivera-Monroy, Victor H., Doyle, Thomas W., Dahdouh-Guebas, Farid, Duke, Norman C., Fontalvo-Herazo, Martha L., Hildenbrandt, Hanno, Koedam, Nico, Mehlig, Ulf, Piou, Cyril, and Twilley, Robert R. (2008) Advances and limitations of individual-based models to analyze and predict dynamics of mangrove forests: a review. Aquatic Botany, 89 (2). pp. 260-274.

Karthikeyan, Obuli Parthiba, Murugesan, S., Joseph, Kurian, and Nagendran, R. (2008) Leaching of inorganic pollutants from fresh and partially degraded municipal solid waste: a lysimeter study under tropical conditions. International Journal of Environment and Waste Management, 2 (1/2). pp. 49-64.

Goldberg, Jeremy, Adams, Katrina, Albert, Julita, Asher, Jacob, Brown, Paul, Brown, Valerie, Burdick, David, Carroll, Benjamin, Craig, Peter, Fenner, Douglas, Fillmed, Christina, Fread, Vanessa, Gawel, Mike, George, Andy, Golbuu, Yimnang, Goldman, Lee, Graham, Curtis, Hall, Amy, Hasurmai, Mike, Jacob, Lucy, Jacobson, Dean, Joseph, Eugene, Kenyon, Jean, Kostka, Willy, Leberer, Trina, Luckymis, Marston, Lundblad, Emily, Malakai, Scotty, Maragos, Jim, Marcus, Allan, Marino, Sebastian, Mathias, Dave, McIlwain, Jenny, Miller, Joyce, Minton, Dwayne, Nadon, Marc, Palik, Steve, Pioppi, Nick, Raymundo, Laurie, Richards, Benjamin, Sabater, Marlowe, Schroeder, Robert, Schupp, Peter, Smith, Ellen, Takesy, Alissa, and Zgliczynski, Brian (2008) Status of coral reef resources in Micronesia and American Samoa: 2008. Status of Coral Reefs of the World: 2008, 1. pp. 199-212.

Doupe, Robert G., and Burrows, Damien W. (2008) Thirty years later, should we be more concerned for the ongoing invasion of Mozambique Tilapia in Australia? Pacific Conservation Biology, 14 (4). pp. 235-238.

Roberts, David A., Poore, Alistair G.B., and Johnston, Emma L. (2007) MBACI sampling of an episodic disturbance: stormwater effects on algal epifauna. Marine Environmental Research, 64 (4). pp. 514-523.

Petus, Caroline, Garcia Valencia, Carolina, Thomas, Yves François, and Cesaracio, Marcella (2007) Étude de la variabilité saisonnière et interanuelle de la résurgence de la Guajira (Colombie) par analyse de données satellitaires AMI-WIND, SEAWINDS ET AVHRR / Study of the seasonal and interannual variability of the Guajira upwelling (Colombia) based on the analysis of AMI-Wind, SeaWinds and AVHRR satellite data. Télédétection, 7. pp. 143-156.

Sayer, Jeffrey, Campbell, Bruce, Petheram, Lisa, Aldrich, Mark, Ruiz Perez, Manuel, Endamana, Dominique, Nzooh Dongmo, Zacharie-L., Defo, Louis, Mariki, Stephen, Doggart, Nike, and Burgess, Neil (2007) Assessing environment and development outcomes in conservation landscapes. Biodiversity and Conservation, 16 (9). pp. 2677-2694.

Sloan, Sean (2007) Fewer people may not mean more forest for Latin American forest frontiers. Biotropica, 39 (4). pp. 443-446.

Ziembicki, Mark, and Woinarski, John C.Z. (2007) Monitoring continental movement patterns of the Australian Bustard Ardeotis australis through community-based surveys and remote sensing. Pacific Conservation Biology, 13 (2). pp. 128-142.

Collier, Catherine J., Lavery, Paul S., Masini, Raymond J., and Ralph, Peter J. (2007) Morphological, growth and meadow characteristics of the seagrass Posidonia sinuosa along a depth-related gradient of light availability. Marine Ecology Progress Series, 337. pp. 103-115.

Mackey, Paul, Collier, Catherine J., and Lavery, Paul S. (2007) Effects of experimental reduction of light availability on the seagrass Amphibolis griffithi. Marine Ecology Progress Series, 342. pp. 117-126.

Jupiter, Stacy D., Potts, Donald C., Phinn, Stuart R., and Duke, Norman C. (2007) Natural and anthropogenic changes to mangrove distributions in the Pioneer River Estuary (Queensland, Australia). Wetlands Ecology and Management, 15 (1). pp. 51-62.

Choat, Brendan, Ball, Marilyn C., Luly, Jon G., and Holtum, Joseph A.M. (2005) Hydraulic architecture of deciduous and evergreen dry rainforest tree species from north-eastern Australia. Trees, 19 (3). pp. 305-311.

Bell, Alicia M., and Duke, Norman C. (2005) Effects of Photosystem II-inhibiting herbicides on mangroves: preliminary toxicology trials. Marine Pollution Bulletin, 51 (1-4). pp. 297-307.

McMahon, Kathryn, Bengston-Nash, Susan, Eaglesham, Geoff, Müller, Jochen F., Duke, Norman C., and Winderlich, Steve (2005) Herbicide contamination and the potential impact to seagrass meadows in Hervey Bay, Queensland, Australia. Marine Pollution Bulletin, 51 (1-4). pp. 325-334.

Joyce, Karen E., Phinn, Stuart R., and Roelfsema, Chris M. (2005) The costs and benefits of image acquisition and pre-processing for coral reef remote sensing. Backscatter - Journal of the Alliance for Marine Remote Sensing, 16 (1). pp. 23-26.

Morgan, David L., Rowland, Andrew J., Gill, Howard S., and Doupe, Rob G. (2004) The implications of introducing a large piscivore (Lates calcarifer) into a regulated northern Australian river (Lake Kununurra, Western Australia). Lakes and Reservoirs: Research and Management, 9 (3). pp. 181-193.

Da Silva, Eduardo Teixeira, Ridd, Michael, Klumpp, David, and Ridd, Peter (2004) Relative contribution of food and water to the Cd burden in Balanus amphitrite in an urban tidal creek discharging into the Great Barrier Reef lagoon. Estuarine, Coastal and Shelf Science , 60 (2). pp. 313-324.

Joyce, K.E., Phinn, S.R., Roelfsema, C.M., Neil, D.T., and Dennison, W.C. (2004) Combining landsat ETM and reef check classifications for mapping coral reefs: a critical assessment from the southern Great Barrier Reef, Australia. Coral Reefs, 23 (1). pp. 21-25.

Goldberg, Jeremy, and Wilkinson, Clive (2004) Global threats to coral reefs: coral bleaching, global climate change, disease, predator plagues and invasive species. Status of Coral Reefs of the World, 2004. pp. 67-92.

Joyce, Karen E., and Phinn, Stuart R. (2003) Hyperspectral analysis of chlorophyll content and photosynthetic capacity of coral reef substrates. Limnology and Oceanography, 48 (1 part 2). pp. 489-496.

Andréfouet, Serge, Kramer, Philip, Torres-Pulliza, Damaris, Joyce, Karen E., Hochberg, Eric J., Garza-Pérez, Rodrigo, Mumby, Peter J., Riegl, Bernhard, Yamano, Hiroya, White, William H., Zubia, Mayalen, Brock, John C., Phinn, Stuart R., Naseer, Abdulla, Hatcher, Bruce G., and Muller-Karger, Frank E. (2003) Multi-site evaluation of IKONOS data for classification of tropical coral reef environments. Remote Sensing of Environment, 88 (1-2). pp. 128-143.

Joyce, K.E., Stanford, M., and Phinn, S.R. (2002) Remote sensing requirements for coral reef monitoring. Backscatter-Journal of the Alliance for Marine Remote Sensing, 13 (1). pp. 20-24.

Duke, Norman C. (2001) Gap creation and regenerative processes driving diversity and structure of mangrove ecosystems. Wetlands Ecology and Management, 9 (3). pp. 257-269.

Duke, Norman C., Burns, Kathryn A., Swannell, Richard P.J., Dalhaus, Otto, and Rupp, Roland J. (2000) Dispersant use and a bioremediation strategy as alternate means of reducing the impact of large oil spills on mangrove biota in Australia: the Gladstone field trials. Marine Pollution Bulletin, 41 (7-12). pp. 403-412.

Burns, K.A., Codi, S., and Duke, N.C. (2000) Gladstone, Australia field studies: weathering and degradation of hydrocarbons in oiled mangrove and salt marsh sediments with and without the application of an experimental bioremediation protocol. Marine Pollution Bulletin, 41 (7-12). pp. 392-402.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., Ryan, D.A.J., and Ahokas, J.T. (2000) Induction of hepatic cytochrome P-450 1A in Pikey Bream (Acanthopagrus berda) collected from agricultural and urban catchments in far north Queensland. Marine Pollution Bulletin, 41 (7-12). pp. 377-384.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., and Coventry, R.J. (1999) Organochlorine pesticide residues in soils and sediments of the Herbert and Burdekin River regions: implications for contamination of the Great Barrier Reef. Marine Pollution Bulletin, 39 (1-12). pp. 367-375.

Burns, Kathy, Codi, Susan, Pratt, Catherine, and Duke, Norman (1999) Weathering of hydrocarbons in mangrove sediments: testing the effects of using dispersants to treat oil spills. Organic Geochemistry, 30. pp. 1273-1286.

Duke, N.C., Burns, K.A., Ellison, J.C., Rupp, R.J., and Dalhaus, O. (1998) Effects of oil and dispersed-oil on mature mangroves in field trials at Gladstone. APPEA Journal, 38 (2). pp. 637-645.

Duke, N.C., Ellison, J.C., and Burns, K.A. (1998) Surveys of oil spill incidents affecting mangrove habitat in Australia: a preliminary assessment of incidents, impacts on mangroves, and recovery of deforested areas. APPEA Journal, 38 (2). pp. 646-654.

Duke, Norman C., Pinzón, Zulelka S., and Prada, Martha C. (1997) Large scale damage to mangrove forests following two large oil spills in Panama. Biotropica, 29 (1). pp. 2-14.

Duke, Norman C., and Pinzón M., Zuleika S. (1992) Aging Rhizophora seedlings from leaf scar nodes: a technique for studying recruitment and growth in mangrove forests. Biotropica, 24 (2 Part A). pp. 173-186.

van Herwerden, Lynne, and Griffiths, C.L. (1991) Human recreational activity along the northwestern shores of False Bay. Transactions of the Royal Society of South Africa, 47 (4-5). pp. 737-748.

Robertson, A.I., and Duke, N.C. (1990) Mangrove fish communities in tropical Queensland, Australia: spatial and temporal patterns in densities, biomass and community structure. Marine Biology, 104 (3). pp. 369-379.

Duke, N.C. (1990) Phenological trends with latitude in the mangrove tree Avicennia marina. Journal of Ecology, 78 (1). pp. 113-133.

Robertson, Alistar I., and Duke, Norman C. (1990) Recruitment, growth and residence time of fishes in a tropical Australian mangrove system. Estuarine, Coastal and Shelf Science, 31 (5). pp. 723-743.

Robertson, A.I., and Duke, N.C. (1987) Insect herbivory on mangrove leaves in North Queensland. Australian Journal of Ecology, 12 (1). pp. 1-7.

Duke, N.C., Bunt, J.S., and Williams, W.T. (1984) Observations on the floral and vegetative phenologies of north-eastern Australian mangroves. Australian Journal of Botany, 32 (1). pp. 87-99.

Williams, W.T., Bunt, J.S., and Duke, N.C. (1981) Mangrove litter fall in north eastern Australia. 2. Periodicity. Australian Journal of Botany, 29 (5). pp. 555-563.

Duke, N.C., Bunt, J.S., and Williams, W.T. (1981) Mangrove litter fall in north-eastern Australia. 1. Annual totals by component in selected species. Australian Journal of Botany, 29 (5). pp. 547-553.

Book Chapter

Duke, Norman C., and Schmitt, Klaus (2015) Mangroves: unusual forests at the seas edge. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-24.

Duke, Norman (2014) Mangrove coast. In: Harff, Jan, Meschede, Martin, Petersen, Sven, and Thiede, Jörn, (eds.) Encyclopedia of Marine Geosciences. Encyclopedia of Earth Sciences Series . Springer, The Netherlands, pp. 412-422.

Sloan, Sean (2014) A dynamic landscape of forest regeneration in a deforesting forest frontier. In: Bouza Herrera, Carlos Narciso, (ed.) Deforestation: conservation policies, economic iImplications and environmental impact. Environmental Research Advances . Nova, New York, NY, USA, pp. 153-187.

Duke, Norman C. (2011) Mangrove islands. In: Hopley, David, (ed.) Encyclopedia of Modern Coral Reefs. Structure, Form and Process. Springer, Dordrecht, The Netherlands, pp. 653-655.

Ferguson, Kathryn (2009) That's not a reef, now that's a reef: a century of (re)placing the Great Barrier Reef. In: Dobrin, S. I., and Morey, S. , (eds.) ECOSEE: image, rhetoric and nature. State University of New York Press, New York, USA, pp. 223-238.

Chin, Andrew, and Marshall, Paul (2003) Reactive monitoring at Nelly Bay Harbour: using environmental monitoring to manage marine construction activities. In: Wilkinson, Clive, Green, Alison, Almany, Jeanine, and Dionne, Shannon, (eds.) Monitoring Coral Reef Protected Areas. Australian Institute of Marine Science, Townsville, QLD, Australia, pp. 34-35.

Duke, Norman (2001) Mangrove phenologies and the factors influencing them in the Australasian region. In: De Lacerda, Luiz-Drude, (ed.) Mangrove Ecosystems: Function and Management. Environmental Science . Springer-Verlag, Berlin, Germany, pp. 217-233.

Duke, Norman, and Wolanski, Eric (2001) Muddy coastal waters and depleted mangrove coastlines - depleted seagrass and coral reefs. In: Wolanski, Eric, (ed.) Oceanographic Processes of Coral Reefs: physical and biology links in the Great Barrier Reef. CRC Press, Washington, DC, USA, pp. 77-91.

Duke, Norman C., Pinzon, Zuleika S., and Prada, Martha C. (1999) Recovery of tropical mangrove forests following a major oil spill: a study of recruitment and growth, and the benefits of planting. In: Yáñez-Arancibia, A., and Lara-Domínguez, A.L., (eds.) Ecosistemas de Manglar en América Tropical / Mangrove Ecosystems in Tropical America. Instituto de Ecologia, Xalapa, México, pp. 231-254.

Duke, Norman (1996) Mangrove reforestation in Panama: an evaluation of planting in areas deforested by a large oil spill. In: Field, Colin D., (ed.) Restoration of mangrove ecosystems. International Society for Mangrove Ecosystems ISME & International Tropical Timber Organization ITTO, Okinawa, Japan, pp. 209-232.

Report

Templeman, Shelley, Williams, Chris, Gainsford, Ashton, and Baker, Ronnie (2017) Woodcutters Mine. Receiving Environment Monitoring Program. 1 Nov 2015 to 31 Oct 2016. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Williams, Christopher, and Templeman, Shelley (2017) Mt Leyshon Mine Receiving Environment Monitoring Program Report 1 Nov 2015 to 31 Oct 2016. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Templeman, Shelley, Baker, Ronnie, and James, Cassandra (2017) Carpentaria Gold Receiving Environment Monitoring Program design version 2: report 17/33. Report. James Cook University, Townsville, QLD, Australia.

Williams, Chris, and Templeman, Shelley (2017) Carpentaria Gold proposed EA amendments. Report. James Cook University, Townsville, QLD, Australia.

Templeman, Shelley, Williams, Christopher, and Baker, Ronnie (2016) Carpentaria Gold Receiving Environment Monitoring Program 1 Nov 2015 to 31 Oct 2016 Report 16/57. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Wells, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring Update: May - August 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Bryant, Catherine, Davies, Jaclyn, and Rasheed, Michael (2016) Gladstone Healthy Harbour Partnership 2016 Report Card: ISP011: seagrass. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Shepherd, Lloyd, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring Update: February - May 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, Barrett, S., and Ware, G. (2016) Woodcutters Mine. Receiving Environment Monitoring Program. 1 Nov 2014 to 31 Oct 2015. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Reason, Carissa, York, Paul, Scott, Emma, McKenna, Skye, and Rasheed, Michael (2016) Seagrass Habitat of Mourilyan Harbour: annual monitoring report: 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, and James, Cassandra (2016) Mt Leyshon Mine Receiving Environment Monitoring Program Report 1 Nov 2014 to 31 Oct 2015 Vol 1 & 2. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

York, Paul H., Reason, Carissa, Scott, Emma, Sankey, Tonia, and Rasheed, Michael A. (2016) Seagrass Habitat of Cairns Harbour and Trinity Inlet: annual monitoring report 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, Davies, Jaclyn, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: November 2015 - February 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: August - November 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Collier, Catherine J., Langlois, Lucas, Zemoi, Rahel, Martin, Katherine, and McKenzie, Len (2016) Developing and refining biological indicators for condition assessments in an integrated monitoring program. Report. James Cook University, Cairns, Australia.

Collier, Catherine J., Chartrand, Katie, Honchin, Carol, Fletcher, Adam, and Rasheed, Michael (2016) Light thresholds for seagrasses of the GBRWHA: a synthesis and guiding document. Report. James Cook University, Cairns, Australia.

Bryant, Catherine, Davies, Jaclyn, Sankey, Tonia, and Rasheed, Michael (2016) Long-Term Seagrass Monitoring in Port Curtis: quarterly permanent transect monitoring progress report 2009 to 2015. Report. James Cook University, Cairns, QLD, Australia.

Bryant, C.V., Carter, A.B., Jarvis, J.C., and Rasheed, M.A. (2016) Port Curtis seagrass seed bank density and viability studies: year 2 report. Report. James Cook University, Cairns, QLD, Australia.

Davies, J.D., Bryant, C.V., Carter, A.B., and Rasheed, M.A. (2016) Seagrasses in Port Curtis and Rodds Bay 2015: annual long-term monitoring. Report. James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, and James, Cassandra (2015) Carpentaria Gold Receiving Environment Monitoring Program Design Report 15/71. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Templeman, S., and James, C. (2015) Carpentaria Gold Review of Historic Information and Data Report 15/70. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Williams, Christopher, and Templeman, Shelley (2015) MMG Century Mine Sediment Quality Monitoring Program (SQMP) 2015 compliance assessment. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Waltham, Nathan, McKenna, Skye, York, Paul, Devlin, Michelle, Campbell, Sean, Rasheed, Michael, Da Silva, Eduardo, Petus, Caroline, and Ridd, Peter (2015) Port of Mackay and Hay Point Ambient Marine Water Quality Monitoring Program (July 2014 to July 2015). Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Templeman, Shelley, and Butler, Barry (2015) Century Mine receiving environment monitoring program (remp) 2015 volumes one & two. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: May - August 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Taylor, Helen, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring February/ March - May 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley (2015) MMG Century Mine Bullridge Creek Sediment Survey 2015. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Templeman, Shelley (2015) MMG Century Mine Coglan Creek Sediment Survey 2015. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Carter, A.B., Davies, J.D., Bryant, C.V., Jarvis, J.C., McKenna, S.A., and Rasheed, M.A. (2015) Seagrasses in Port Curtis and Rodds Bay 2014: annual long-term monitoring, biannual western basin, and updated baseline survey. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley (2015) Woodcutters Mine. Receiving Environment Monitoring Program. 1 Nov 2013 to 31 Oct 2014. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

McKenna, S.A., Sozou, A.M., Scott, E.L., and Rasheed, M.A. (2015) Port of Abbot Point long-term seagrass monitoring: annual report 2013-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, Butler, Barry, and James, Cassandra (2015) Closed Mt Leyshon Mine Lease Receiving Environment Monitoring Program 1 Nov 2013 to 31 Oct 2014 Vol 1 & 2. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: November 2014 - March 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley (2015) Woodcutters mine receiving environment monitoring program design report. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Sozou, A.M., McKenna, S.A., and Rasheed, M.A. (2015) Port of Karumba long-term seagrass monitoring: November 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2015) Port of Hay Point & Keswick Island seagrass & benthic habitat: baseline survey: 2014. Report. James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Tol, Samantha, and Rasheed, Michael (2015) Port of Townsville annual monitoring and baseline survey: October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., and Carter, A.B. (2015) Port of Weipa long-term seagrass monitoring: 2000-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Jarvis, Jessie, Bryant, Catherine, and Rasheed, Michael (2015) Development of seagrass indicators for the Gladstone Healthy Harbour Partnership report card. Report. James Cook University, Cairns, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2015) Environmental DNA (eDNA) survey of the Tilapia in the Cudgeon Region, NSW. Report. James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Sankey, Tonia, Jarvis, Jessie, Bryant, Catherine, and Rasheed, Michael (2015) Long term seagrass monitoring in Port Curtis: quarterly permanent transect monitoring progress report 2009 to 2014. Report. James Cook University, Cairns, QLD, Australia.

Jarvis, J.C., Scott, E.L., Bryant, C.V., and Rasheed, M.A. (2015) Port Curtis seagrass seed bank density and viability studies: year 1. Report. James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Chartrand, K.M., Jarvis, J.C., Carter, A.B., Davies, J.C., and Rasheed, M.A. (2015) Port of Abbot Point: initial light thresholds for modelling impacts to seagrass from the Abbot Point Growth Gateway Project. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Noble, Tansyn, Robson, Heather, Saunders, Richard, and Jerry, Dean (2015) The utility of eDNA as a tilapia surveillance tool. Report. Invasive Animalc Cooperative Research Centre, Canberra, ACT, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring August - October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, and Butler, Barry (2014) Seepage investigations adjacent to MMG century evaporation dam. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait mapping: seagrass consolidation: 2002-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, and Butler, Barry (2014) The condition of stream ecosystems influenced by Century Mine, 2014. Volumes one & two. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., York, P.Y., and Rasheed, M.A. (2014) The effects of climate on seagrasses in the Torres Strait: 2011-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Reason, Carissa (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring May - July 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait dugong sanctuary: deepwater seagrass monitoring 2010-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Thursday Island: March 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Tasker, Zoe (2014) Gladstone Western Basin Post Dredge BPAR Monitoring March - May 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, C., Davies, J.D., Jarvis, J.C., Tol, S., and Rasheed, M. (2014) Seagrasses in Port Curtis & Rodds Bay 2013: annual long term monitoring, biannual western basin surveys & updated baseline survey. Report. TropWATER, James Cook University, Cairns.

Bryant, C.V., and Tasker, Z. (2014) Gladstone Western Basin Post Dredge BPAR Monitoring December 2013 - February 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

York, P.H., Davies, J.N., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Mourilyan: 2013. Report. TropWATER, James Cook University, Cairns.

Jarvis, J.C., Rasheed, M.A., McKenna, S.A., and Sankey, T. (2014) Seagrass habitat of Cairns Harbour and Trinity Inlet: annual and quarterly monitoring report 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2014) Port of Abbot Point long-term seagrass monitoring: annual report 2012-2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Port of Karumba long-term seagrass monitoring: November 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2014) Port of Abbot Point proposed dredge footprint: seagrass survey: December 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, J.N., McKenna, S.A., Jarvis, J.C., Carter, A.B., and Rasheed, M.A. (2014) Port of Townsville annual monitoring and baseline survey: October 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., Carter, A.B., and McKenna, S.A. (2014) Port of Weipa long-term seagrass monitoring: September 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Shelley, and Butler, Barry (2014) The condition of stream ecosystems influenced by Century Mine, 2013 - volumes one & two. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2014) Critical marine habitats in high risk areas, South Warden Reef to Howick Group region: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2014) Environmental DNA (eDNA) survey of Tilapia in the lower Pioneer catchment. Report. James Cook University, Townsville, QLD, Australia.

Jerry, Dean, Noble, Tansyn, Robson, Heather, and Burrows, Damien (2014) Environmental DNA (eDNA) survey of Tilapia infestations in the Fitzroy River Basin. Report. James Cook University, Townsville, QLD, Australia.

Noble, Tansyn, Robson, Heather, Burrows, Damien, and Jerry, Dean (2014) Environmental DNA (eDNA) survey of the Tilapia in the Fitzroy Basin. Report. James Cook University, Townsville, QLD, Australia.

Collier, Catherine J., Devlin, Michelle, Langlois, Lucas, McKenzie, Len J., Petus, Caroline, Da Silva, Eduardo Teixeira, McMahon, Kathryn, Adams, Matthew, O'Brien, Kate, Statton, John, and Waycott, Michelle (2014) Final report on thresholds and indicators of declining water quality as tools for tropical seagrass management. Report. James Cook University, Townsville, Australia.

Bryant, Catherine, Jarvis, Jessie, York, Paul, and Rasheed, Michael (2014) Gladstone Healthy Harbour Partnership Pilot Report Card. ISP011: seagrass final report. Report. TropWATER, Cairns, QLD, Australia.

Bryant, C., Davies, J., Sankey, T., Jarvis, J., and Rasheed, M. (2014) Long Term Seagrass Monitoring in Port Curtis: quarterly seagrass assessments & permanent transect monitoring progress report 2009 to 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Goosem, M., and Pohlman, C. (2014) Rapid assessment of environmental monitoring sites: Powerlink Queensland easements. Report. James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report December 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report November 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report October 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Jarvis, J.C., McKenna, S.A., and Rasheed, M.A. (2013) Seagrass habitat of Cairns Harbour and Trinity Inlet: sediment seed bank analysis. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Carter, A.B., Davies, J.N., McKenna, S.A., Reason, C.L., and Rasheed, M.A. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2013 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Lewis, S.E., Tol, S.J., and Sankey, T. (2013) Abbot Point proposed dredge disposal areas: benthic habitat survey: 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, Catherine, Amies, Rachel, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: September 2013 update report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Sankey, T., and Tol, S.J. (2013) Benthic macro-invertebrates of Cairns Harbour and Trinity Inlet: survey: 2012/13. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, Bryant, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report August 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report July 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., Carter, A.B., Reason, C.L., and Loban, F. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2012 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report June 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report May 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Port Curtis and Rodds Bay Seagrass Monitoring Program. Biannual western basin & annual long term monitoring November 2012. Report. TropWATER, James Cook University, Cairns.

Rasheed, M.A., McKenna, S.A., and Tol, S. (2013) Seagrass habitat of Cairns Harbour and Trinity Inlet: annual monitoring and updated baseline survey. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report April 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Long-term seagrass monitoring in the Port of Mourilyan: 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, Rachel, McCormack, Catherine, and Rasheed, Michael (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report March 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McCormack, Catherine, Rasheed, Michael, Davies, Jaclyn, Carter, Alexandra, Sankey, Tonia, and Tol, Samantha (2013) Long term seagrass monitoring in the Port Curtis western basin: quarterly seagrass assessments & permanent transect monitoring progress report: November 2009 to November 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Port of Karumba long-term seagrass monitoring: October 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, McKenna, Skye, and Rasheed, Michael (2013) Port of Townsville long-term seagrass monitoring: September 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2013) Port of Weipa long‐term seagrass monitoring: August 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amies, R.L., Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report February 2013. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: January 2013 update report. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2013) Port of Abbot Point long-term seagrass monitoring: annual report 2011-2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Brodie, Jon, Waterhouse, Jane, Maynard, Jeffrey, Bennett, John, Furnas, Miles, Devlin, Michelle, Lewis, Stephen, Collier, Catherine, Schaffelke, Britta, Fabricius, Katharina, Petus, Caroline, da Silva, Eduardo, Zeh, Daniel, Randall, Lucy, Brando, Vittorio, McKenzie, Len, O'Brien, Dominique, Smith, Rachael, Warne, Michael, Brinkman, Richard, Tonin, Hemerson, Bainbridge, Zoe, Bartley, Rebecca, Negri, Andrew, Turner, Ryan, Davis, Aaron, Bentley, Christie, Mueller, Jochen, Alvarez-Romero, Jorge, Henry, Nyssa, Waters, David, Yorkston, Hugh, and Tracey, Dieter (2013) Assessment of the relative risk of water quality to ecosystems of the Great Barrier Reef. A report to the Department of the Environment and Heritage Protection, Queensland Government, Brisbane - Report 13/28. Report. James Cook University, Townsville, QLD, Australia.

Carter, Alex, Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2013) Critical marine habitats in high risk areas, Torres Strait: Seo Reef to Kai-Wareg Reef: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2013) Critical marine habitats in high risk areas: Bathurst Bay region: 2012 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: December 2012 update report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Devlin, Michelle, Petus, Caroline, da Silva, Eduardo Teixera, Alvarez-Romero, Jorge, Zeh, Daniel, Waterhouse, Jane, and Brodie, Jon (2013) Mapping of exposure to flood plumes, water types and exposure to pollutants (DIN, TSS) in the Great Barrier Reef: toward the production of operational risk maps for the world's most iconic marine ecosystem. Report Section. James Cook University, Townsville, QLD.

White, Davina, Petus, Caroline, and Lewis, Megan M. (2013) Temporal dynamics of spring complexes. Report. National Water Commission, Canberra, ACT, Australia.

Davies, J.N., McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: September 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Sankey, T.L., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: July 2012 update report. Report. Department of Agriculture Fisheries and Forestry, QLD, Cairns, QLD, Australia.

McCormack, Catherine, and Rasheed, Michael (2012) Gladstone Permanent Transect Seagrass Monitoring: May 2012 interim update report. Report. Department of Agriculture, Fisheries and Forestry, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: April 2012 interim update report. Report. Department of Agriculture, Fisheries and Forestry, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: March 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: February 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: January 2012 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Carter, Alex, Chartrand, Katie, and Rasheed, Michael (2012) Critical marine habitats in high risk areas: Princess Charlotte Bay region: 2011 atlas. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., Carter, A.B., Rasheed, M.A., and Davies, J.N. (2012) Gladstone Permanent Transect Seagrass Monitoring: August 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

McCormack, C.V., Carter, A.B., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: June 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: November 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: October 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McKenna, S.A., Rasheed, M.A., and Taylor, H.A. (2012) Long-term seagrass monitoring in the Port of Thursday Island: February 2012. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Rasheed, M.A., Reason, C.L., McCormack, C.V., Chartrand, K.M., and Carter, A.B. (2012) Port Curtis and Rodds Bay seagrass monitoring program: November 2011. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2012) Port of Townsville long-term seagrass monitoring: October 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2012) Port of Weipa long-term seagrass monitoring: 2000-2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Waterhouse, Jane, Alvarez-Romero, Jorge, Abbott, Brett, and da Silva, Eduardo Teixeira (2012) Reef Rescue Marine Monitoring Program: flood plume monitoring annual report 2010-11: incorporating results from the Extreme Weather Response Program flood plume monitoring. Report. James Cook University, Townsville, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Petus, Caroline, da Silva, Eduardo Teixeira, Debose, Jennifer, and Álvarez-Romero, Jorge (2012) Reef Rescue Monitoring Program: final report of JCU activities 2011/12: flood plumes and extreme weather monitoring for the Great Barrier Reef Marine Park Authority. Report. James Cook University, Townsville, QLD, Australia.

McCormack, C.V., and Chartrand, K.M. (2011) Gladstone Permanent Transect Seagrass Monitoring: December 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: November 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: October 2011 interim update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: additional September 2011 assessment update report. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

McCormack, C.V., Sankey, T.L., Hedge, S.A.M., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: July 2011 update. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Sankey, T.L., Hedge, S.A., McKenzie, L.J., McCormack, C.V., and Rasheed, M.A. (2011) Gladstone Permanent Transect Seagrass Monitoring: April 2011 update. Report. Department of Employment, Economic Development and Innovation, Cairns, QLD, Australia.

Fairweather, C.L., McKenna, S.A., and Rasheed, M.A. (2011) Long-term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2009 and 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Fairweather, C.L., McKenna, S.A., and Rasheed, M.A. (2011) Long-term seagrass monitoring in the Port of Mourilyan: November 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Chartrand, K.M., McCormack, C.V., and Rasheed, M.A. (2011) Port Curtis and Rodds Bay seagrass monitoring program, November 2010. Report. Department of Employment, Economic Development and Innovation, QLD, Cairns, QLD, Australia.

McCormack, C.V., Rasheed, M.A., and Unsworth, R.K.F. (2011) Port of Weipa Long Term Seagrass Monitoring: September 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., and Carter, A. (2011) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: interim report 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, A., McKenna, S.A., and Rasheed, M.A. (2011) Seagrass, algae and macro-invertebrate survey for proposed channel extension in the Port of Weipa. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Grech, Alana, and Marsh, Helene (2010) Condition, Trends and Predicted Futures of Dugong Populations in the Great Barrier Reef World Heritage Area: Including an Evaluation of the Potential and Cost-Effectiveness of Indicators of the Status of These Populations. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Marsh, Helene, Bradley, John, Parra, Guido, Grech, Alana, Whiting, Scott, Beasley, Isabel, Johnson, Steve, Barrett, David, Fitzpatrick, Nicholas, Friday, Graham, Johnston, Anthony, Keighran, Fiona, Miller, Ronnie, Norman, Leanne, Pracy, Damien, and the Yanyuwa families (2010) Yarrbanthawu ki-Miriyiyu: Looking for Dolphins. Developing a Decision Process Based on Expert Knowledge to Inform the Management of Dugongs and Coastal Dolphins in Northern Australia: The Yanyuwa Sea Country in the Northern Territory as a Case Study. Report. School of Earth and Environmental Sciences, James Cook University, Townsville, QLD, Australia.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2010) Long term seagrass monitoring in the Port of Thursday Island: February 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Chartrand, K.M., McKenna, S.A., Petrou, K., Jimenez-Denness, I.M., Franklin, J., Sankey, T.L., Hedge, S.A., Rasheed, M.A., and Ralph, P.J. (2010) Port Curtis benthic primary producer habitat assessment and health studies update: interim report December 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., and Rasheed, M.A. (2010) Port of Weipa long term seagrass monitoring: September 2009. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Mitchell, Alan, Brodie, Jon, and Furnas, Miles (2010) Report on AIMS river nutrient data collected from downstream sites in major Queensland rivers draining to the Great Barrier Reef lagoon, 1987-2000. Report. James Cook University, Townsville, QLD, Australia. (Unpublished)

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2010) Seasonal dynamics, productivity and resilience of seagrass at the Port of Abbot Point: 2008-2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Unsworth, R.K.F., Taylor, H.A., Chartrand, K.M., and Sankey, T.L. (2009) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, Skye, and Rasheed, M.A. (2009) Port of Karumba long term seagrass monitoring: October 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

O'Reagain, Peter, Bainbridge, Zoe, and Brodie, Jon (2008) Wambiana Grazing Trial: water quality update to Burdekin Dry Tropics NRM. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Doupè, Robert G., Schaffer, Jason, and Knott, Matthew J. (2008) An Example of Freshwater Turtle Habitat Destruction by Foraging Feral Pigs in Tropical North-Eastern Australia. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Marsh, Helene, Grech, Alana, Delean, Steve, and Hodgson, Amanda (2008) Distribution and Abundance of the Dugong in Gulf of Carpentaria Waters: a basis for cross-jurisdictional conservation planning and management. Report. UNSPECIFIED. (Unpublished)

Rasheed, M.A., McKenna, S.A., Sankey, T.L., and Taylor, H.A. (2008) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: November 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., Taylor, H.A., and Sankey, T.L. (2008) Long term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Sankey, T.L., and Taylor, H.A. (2008) Long term seagrass monitoring in the Port of Mourilyan: November 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2008) Long term seagrass monitoring in the Port of Thursday Island: March 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, S.A., Rasheed, M.A., Unsworth, R.K.F., and Chartrand, K.M. (2008) Port of Abbot Point seagrass baseline surveys: wet & dry season 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Coles, Robert, McKenzie, Len, Rasheed, Michael, Mellors, Jane, Taylor, Helen, Dew, Kara, McKenna, Skye, Sankey, Tonia, Carter, Alexandra, and Grech, Alana (2007) Status and trends of seagrass habitats in the Great Barrier Reef World Heritage Area. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Marsh, Helene, Hodgson, Amanda, Lawler, Ivan, Grech, Alana, and Delean, Steve (2007) Condition, status and trends and projected futures of the dugong in the Northern Great Barrier Reef and Torres Strait; including identification and evaluation of the key threats and evaluation of available management options to improve its status. Report. UNSPECIFIED, Townsville, QLD, Australia.

Rasheed, Michael, Taylor, Helen, Dew, Kara, Carter, Alex, and Sankey, Tonia (2007) Deepwater seagrass dynamics in Hay Point: measuring variability and monitoring impacts of capital dredging. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Dew, K.R., McKenna, S.A., Sankey, T.L., Taylor, H.A., and Carter, A. (2007) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2006. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, and Sankey, Tonia (2007) Long term seagrass monitoring in the Port of Mourilyan: November 2006. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, and Thomas, Ross (2007) Long-term seagrass monitoring in the Port of Mourilyan: November 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Pitcher, Roland, Haywood, Mick, Hooper, John, Coles, Rob, Bartlett, Chris, Browne, Matthew, Cannard, Toni, Carini, Giovannella, Carter, Alexandra, Cheers, Sue, Chetwynd, Doug, Cook, Stephen, Davie, Peter, Ellis, Nick, Fellegara, Ida, Forcey, Karl, Furey, Melodyrose, Gledhill, Dan, Hendriks, Patricia, Jacobsen, Ian, Johnson, Jeff, Jones, Michelle, Last, Peter, Marks, Shona, McLeod, Ian, Sheils, Jacquie, Sheppard, James, Smith, Greg, Strickland, Colleen, Van der Geest, Claire, Venables, Bill, Wassenberg, Ted, and Yearsley, Gus (2007) Mapping and characterisation of key biotic and physical attributes of the Torres Strait ecosystem: CRC-TS task number: T2.1 final report. Report. CSIRO Marine and Atmospheric Research, Cleveland, QLD, Australia.

Carter, Alex B., Sheppard, James K., Coles, Robert G., and McKenzie, Len J. (2007) Sub-tidal seagrasses of the Torres Strait: spatial patterns and nutritional value for marine herbivores. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Roelofs, Anthony, Rasheed, Michael, Thomas, Ross, McKenna, Skye, and Taylor, Helen (2006) Port of Weipa long term seagrass monitoring: 2003-2005. Report. Ports Corporation of Queensland, Cairns, QLD, Australia.

Marsh, Helene, Lawler, Ivan, Hodgson, Amanda, and Grech, Alana (2006) Dugong distribution and abundance on the urban coast of Queensland: a basis for management. Final Report to Marine and Tropical Research Facility Interim Projects 2005-6. Report. UNSPECIFIED, Townsville, QLD, Australia.

Thomas, R., Rasheed, M.A., and McKenna, S.A. (2005) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., and Thomas, R. (2005) Long-term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October/November 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2005) Port of Abbot Point seagrass, algae and benthic macro-invertebrate community survey: March 2005. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael, and McKenna, Skye (2005) Port of Karumba long term seagrass monitoring: progress report: October 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2004) Port of Hay Point seagrass, algae and benthic macro-invertebrate community survey: July 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Conference Item

Waqairamasi, Senivasa, and Banhalmi-Zakar, Zsuzsa (2019) Environmental compliance in old mines: the Vatukoula Gold Mine Limited (VGML) in Fiji. In: [Presented at the 39th Annual Conference of the International Association for Impact Assessment]. From: IAIA19: International Association of Impact Assessment Conference, 29 April – 2 May 2019, Brisbane, QLD, Australia.

Mahmoud, Mahmoud (2018) Understanding infrastructure development: the African Case. In: [Presented at the IIASA South Africa Workshop]. From: IIASA South Africa Workshop: assessing the impact of road development on natural capital, 16 January 2018, Cape Town, South Africa.

Death, Russell, Canning, Adam, Magierowski, Regina, and Tonkin, Jonathan (2018) Why aren't we managing water quality to protect ecological health? In: [Presented at the 31st Annual FLRC Workshop]. From: 31st Annual FLRC Workshop, 7-9 February 2018, Auckland, New Zealand.

McKenna, S., Carter, A., Bryant, C., Jarvis, J., and Rasheed, M. (2016) Establishing indicators for a report card in a complex marine ecosystem. In: Abstracts from 13th International Coral Reef Symposium. pp. 221-222. From: ICRS 2016: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Devlin, Michelle J., Petus, Caroline, Da Silva, Eduardo, Tracey, Dieter, Wolff, Nicholas, Brodie, Jon, Waterhouse, Jane, and Martin, Katherine (2015) Improvements to water quality monitoring through the inclusion of ocean colour products correlated with in-situ water quality gradients for the Great Barrier Reef. In: Posters from the International Ocean Colour Science meeting. From: IOCS 2015: Second International Ocean Colour Science Meeting, 15-18 June 2015, San Fransisco, CA, USA.

Templeman, Shelley, and James, Cassandra (2015) Challenges to monitoring groundwater contaminants in riparian and terrestrial vegetation. In: Abstracts from the 2015 ASL Conference. p. 126. From: The Changing Freshwater Landscape, 23-26 November 2015, Wellington, NZ.

Carter, Alex, Bryant, Catherine, Jarvis, Jessie, York, Paul, and Rasheed, Michael (2015) Developing thresholds and indicators of seagrass meadow condition using long-term monitoring data. In: Abstracts from the 52nd Australian Marine Science Association Annual Conference. p. 90. From: AMSA 2015: 52nd Australian Marine Science Association Annual Conference, 5-9 July 2015, Geelong, VIC, Australia.

McKenna, Skye, Rasheed, Michael, Coles, Robert, Carter, Alex, Jarvis, Jessie, York, Paul, Davies, Jaclyn, and Bryant, Catherine (2015) Reaping the benefits (and costs) of monitoring seagrass in Queensland Ports. In: Abstracts from the 52nd Australian Marine Science Association Annual Conference. p. 215. From: AMSA 2015: 52nd Australian Marine Science Association Annual Conference, 5-9 July 2015, Geelong, VIC, Australia.

O'Brien, Dominique, Davis, Aaron, Nash, Michael, Di Bella, Lawrence, and Brodie, Jon (2014) Herbert water quality monitoring project: 2011–2013 results. In: Proceedings of the Australian Society of Sugar Cane Technologists (36) pp. 205-219. From: ASSCT 2014: 36th Annual Conference of the Australian Society of Sugar Cane Technologists, 28 April - 1 May 2014, Broadbeach, QLD, Australia.

McKenna, Skye, Rasheed, Michael, Carter, Alexandra, and McCormack, Catherine (2013) Long-term effects of major climatic events on the resilience and capacity for recovery of a tropical seagrass habitat. In: Abstracts from the 50th Australian Marine Science Association Annual Conference. p. 169. From: AMSA 2013: 50th Australian Marine Science Association Annual Conference, 7-11 July 2013, Gold Coast, QLD, Australia.

Atwater, Daniel, Mantovanelli, Alessandra, Prytz, Arnstein, Rehder, Sven, and Wyatt, Lucy (2013) Operational requirements for oceanographic ground-wave HF radars: experiences from the Australian Coastal Ocean Radar Network. In: Proceedings of the International Conference on Radar. pp. 118-121. From: International Conference on Radar, 9-12 September 2013, Adelaide, SA, Australia.

O'Brien, Dominique, Davis, Aaron, Nash, Michael, Di Bella, Lawrence, Turner, Ryan, Reghenzani, John, and Brodie, Jon (2013) Water quality within the Herbert River Catchment associated with specific land use. In: Proceedings of the 35th Conference of the Australian Society of Sugar Cane Technologists. pp. 1-14. From: 35th Conference of the Australian Society of Sugar Cane Technologists, 16-18 April 2013, Townsville, QLD, Australia.

Wyatt, L.R., Atwater, D., Prytz, A., and Rehder, S. (2013) A comparison between SeaSonde and WERA HF radar current measurements. In: Proceedings of Oceans 2013 MTS/IEEE Bergen. From: Oceans 2013 MTS/IEEE Bergen, 10-13 June 2013, Bergen, Norway.

McCormack, Catherine, Chartrand, Katie, and Rasheed, Michael (2012) Impacts of a large-scale flood event on sub-tropical intertidal seagrass meadows. In: Coast to Coast 2012: living on the edge: program and abstract book. p. 73. From: Coast to Coast 2012: Living on the Edge, 17-21 September 2012, Brisbane, QLD, Australia.

Heron, Mal, Wyatt, Lucy, Atwater, Daniel, and Prytz, Arnstein (2012) The Australian coastal ocean radar network: lessons learned in the establishment phase. In: OCEANS, 2012 - YEOSU. pp. 1-5. From: OCEANS, 2012 - YEOSU, 21-24 May 2012, Yeosu, Korea (South).

Devlin, Michelle, Wenger, Amelia, Da Silva, Eduardo, Alvarez Romero, Jorge G., Waterhouse, Jane, and McKenzie, Len (2012) Extreme weather conditions in the Great Barrier Reef: drivers of change? In: Proceedings of the 12th International Coral Reef Symposium. 21A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

McKenna, Skye, Rasheed, Michael, Carter, Alex, Reason, Carissa, and Taylor, Helen (2012) Long-term effects of flooding events on the resilience and recovery of tropical seagrass habitats. In: [Presented at the 10th International Seagrass Biology Workshop]. From: ISBW10: 10th International Seagrass Biology Workshop, 25-30 November 2012, Armação dos Búzios, Brazil.

Carter, Alex, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2012) Reproductive benefits of no-take reserves vary atitudinally for Plectropomus leopardus. In: Abstracts from the 12th International Coral Reef Symposium. pp. 259-260. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Wyatt, Lucy (2012) Use of HF radar for marine renewable applications. In: OCEANS, 2012 - YEOSU. pp. 1-5. From: OCEANS, 2012, 21-24 May 2012, Yeosu, Korea (South).

Petus, Caroline, Lewis, Megan, and White, Davina (2012) Using MODIS Normalized Difference Vegetation Index to monitor seasonal and inter-annual dynamics of wetland vegetation in the Great Artesian Basin: a baseline for assessment of future changes in a unique ecosystem. In: International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences (XXXIX-B8) pp. 187-192. From: 2012 XXII ISPRS Congress, 25 August – 1 September 2012, Melbourne, VIC, Australia.

Heron, M.L., Savidge, Dana, and Blanton, Jack (2012) VHF radar measurements of flow in a salt marsh creek. In: Oceans. pp. 1-5. From: Oceans 2012, 14-19 October 2012, Hampton Road, VA, USA.

Lewis, S.E., Smith, R., Brodie, J.E., Bainbridge, Z.T., Davis, A.M., and Turner, R. (2011) Using monitoring data to model herbicides exported to the Great Barrier Reef, Australia. In: Proceedings of 19th International Congress on Modelling and Simulation. pp. 2051-2056. From: MODSIM 2011 19th International Congress on Modelling and Simulation, 12–16 December 2011, Perth, WA, Australia.

Hateley, Louise, Nelson, P.N., and Amiotte-Suchet, P. (2011) δ13C provides a robust indicator of the sources of suspended sediment in a tropical river traversing forested and agricultural land. In: Abstracts from 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference. p. 36. From: 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, 12-14 July 2011, Cairns, QLD, Australia.

Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2011) Seasonal dynamics, productivity and resilience of tropical deepwater seagrasses and their implications for port developments. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association. p. 138. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Carter, Alex, Carton, Guy, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2011) Significant variation in spawning frequency of common coral trout, Plectropomus leopardus, on the Great Barrier Reef. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association. p. 35. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Myers, Trina, Atkinson, Ian, and Johnstone, Ron (2010) Semantically enabling the SEMAT Project: extending marine sensor networks for decision support and hypothesis testing. In: Proceedings of 2010 International Conference on Complex, Intelligent and Software Intensive Systems. pp. 974-979. From: 3rd IEEE International Workshop on Ontology Alignment and Visualization (OnAV'10), 15-18 February 2010, Krakow, Poland.

Jaffrés, Jasminé B.D., Heron, Malcolm L., Banner, Michael L., Middleditch, Andrew, Steinberg, Craig R., and Durrant, Tom (2010) Evaluation of ADCP wave, WAVEWATCH III and HF radar data on the GBR. In: Proceedings of the Australian Wind Waves Research Science Symposium. pp. 114-117. From: Australian Wind Waves Research Science Symposium, 19-20 May 2010, Gold Coast, QLD, Australia.

McKenna, Skye, Rasheed, Michael A., Taylor, Helen, and Chartrand, Katie (2010) Understanding tropical seagrass light requirements and resilience to effectively manage seagrass health during major dredging projects. In: [Presented at the 9th World Seagrass Conference]. From: 9th World Seagrass Conference, 21-25 November 2010, Phuket, Thailand.

Heron, Mal L., Jaffrés, Jasmine B.D., and Middleditch, Andrew (2010) Wave and wind parameters from HF ocean radar. In: Proceedings of the Australian Wind Waves Research Science Symposium. pp. 110-117. From: Australian Wind Waves Research Science Symposium, 19-20 May 2010, Gold Coast, QLD, Australia.

Bainbridge, Z.T., Brodie, J.E., Lewis, S.E., Waterhouse, J., and Wilkinson, S.N. (2009) Utilising catchment modelling as a tool for monitoring Reef Rescue outcomes in the Great Barrier Reef catchment area. In: Proceedings of 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation. pp. 3301-3307. From: 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation, 13–17 July 2009, Cairns, QLD, Australia.

Carter, Alexandra, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2009) Regional variation in the benefit of no-take marine reserves on reproductive output of the common coral trout, Plectropomus leopardus. In: Abstracts from the Australian National Network in Marine Science Inaugural Conference. From: ANNIMS 2009: Australian National Network in Marine Science Inaugural Conference, 1-2 December 2009, Hobart, TAS, Australia.

Taylor, H.A., Rasheed, M.A., Sankey, T.L, and McKenna, S.A. (2008) Dynamics of a tropical deepwater seagrass community during a major dredging campaign. In: [Presented at Coast to Coast 2008]. From: Coast to Coast 2008, 18-22 August 2008, Darwin, NT, Australia.

McKenna, S.A., Rasheed, M.A., Taylor, H.A., and Sankey, T.L. (2008) Implementing community based seagrass monitoring in the Wellesley Island Group. In: [Presented at Coast to Coast 2008]. From: Coast to Coast 2008, 18-22 August 2008, Darwin, NT, Australia.

Joyce, Karen, Samsonov, Sergey, and Jolly, Gill (2008) Satellite remote sensing of volcanic activity in New Zealand. In: Proceedings of the 2nd Workshop on USE of Remote Sensing Techniques for Monitoring Volcanoes and Seismogenic Areas. From: USERest 08: 2nd Workshop on USE of Remote Sensing Techniques for Monitoring Volcanoes and Seismogenic Areas, 11-14 November 2009, Naples, Italy.

Myers, Trina S., and Atkinson, Ian M. (2008) The semantic reef: a hypothesis-based, eco-informatics platform to support automated knowledge discovery for remotely monitored reef systems. In: Proceedings of the 11th International Coral Reef Symposium (1) pp. 531-535. From: 11th International Coral Reef Symposium 2008, 07 July - 11 July 2008, Fort Lauderdale, Florida, USA.

McAllister, R.R.J., Gordon, I.J., and Stokes, C.J. (2005) KinModel: an agent-based model of rangeland kinship networks. In: Proceedings of MODSIM05 - International Conference on Modelling and Simulation. pp. 1624-1630. From: MODSIM05 - International Conference on Modelling and Simulation, 12-15 December 2005, Melbourne, VIC, Australia.

Duke, Norman, and Khan, M. Ajmal (1999) Structure and composition of the seaward mangrove forest at Mai Po Marshes Nature Reserve, Hong Kong. In: The mangrove ecosystem of Deep Bay and the Mai Po marshes, Hong Kong : proceedings of the International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, Hong Kong. pp. 83-104. From: International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, 3-20 September 1993, Hong Kong.

Book

Sheppard, Charles, Davy, Simon, Pilling, Graham, and Graham, Nicholas (2018) The Biology of Coral Reefs. Biology of Habitats . Oxford University Press, Oxford, UK, pp. 1-370.

Daley, Ben (2014) The Great Barrier Reef: an environmental history. Earthscan Oceans . Routledge, Abingdon, Oxon, UK.

Chin, Andrew, Lison de Loma, Thierry, Reytar, Katie, Planes, Serge, Gerhardt, Karin, Clua, Eric, Burke, Lauretta, and Wilkinson, Clive (2011) Status of Coral Reefs of the Pacific and Outlook: 2011. Global Coral Reef Monitoring Network.

Wilkinson, Clive, Souter, David, and Goldberg, Jeremy (2005) Status of coral reefs in tsunami-affected countries: 2005. Status of Coral Reefs of the World . Australian Institute of Marine Science; Global Coral Reef Monitoring Network, Townsville.

Gummow, Bruce (2005) Vanadium Mining and Cattle Health: sentinel studies, epidemiological and veterinary public health issues. University of Utrecht, Utrecht, Netherlands.

Thesis

Dubuc, Alexia Ida Anne (2019) Dissolved oxygen as a constraint for the structure of mangrove fish assemblages and their patterns of mangrove utilisation: a comparison between natural and disturbed mangrove ecosystems through the Australian and Caledonian coastlines. PhD thesis, James Cook University.

Matthews, Samuel (2019) Modelling tools to support the management of crown-of-thorns starfish (Acanthaster cf. solaris) on Australia's Great Barrier Reef. PhD thesis, James Cook University.

Jain-Schaepfer, Sofia (2018) The effect of motorboat noise on early life stages of coral reef fishes. Masters (Research) thesis, James Cook University.

Ramsby, Blake Donald (2018) The effects of a changing marine environment on the bioeroding sponge Cliona orientalis. PhD thesis, James Cook University.

Davies, Kalu J.E. (2017) Carbon cycle processes in tropical savannas of far North Queensland, Australia. PhD thesis, James Cook University.

Sparrow, Leanne (2017) Key factors influencing the occurrence and frequency of ciguatera. PhD thesis, James Cook University.

Nicolet, Katia Jane (2017) Vectors and environmental drivers of coral disease dynamics on the Great Barrier Reef. PhD thesis, James Cook University.

Vansilalom, Viengphet (2016) Bananas, Laos and economic development: farming practice and farmers' perceptions. PhD thesis, James Cook University.

Mattone, Carlo (2016) Benthic infauna of mangrove forests: dissolved oxygen and environmental settings determine their community composition and function. PhD thesis, James Cook University.

Emslie, Michael J. (2016) Effects of habitat versus fisheries management on spatio-temperal variation in fish assemblages on the Great Barrier Reef. PhD thesis, James Cook University.

Rocker, Melissa M. (2016) Effects of water quality on the health and condition of inshore corals. PhD thesis, James Cook University.

Rechetelo, Juliana (2015) Movement, habitat requirements, nesting and foraging site selection: a case study of an endangered granivorous bird, the Black-throated finch Poephila cincta cincta in north-eastern Australia. PhD thesis, James Cook University.

Gratani, Monica (2015) Promoting the inclusion of Indigenous knowledge in natural resource management: a case study from the Wet Tropics of Queensland, Australia. PhD thesis, James Cook University.

Bainbridge, Zoe T. (2015) Tracing the sources, transport and dispersal of suspended sediment from the Burdekin River catchment into the Great Barrier Reef lagoon. PhD thesis, James Cook University.

Beeden, Roger John (2014) A dynamic understanding of coral reef health informs resilience-based management of the Great Barrier Reef. PhD thesis, James Cook University.

Tsatsaros, Julie Helen (2013) Refining water quality objectives and monitoring in the Wet Tropics using a community based approach. PhD thesis, James Cook University.

Staunton, Kyran Michael (2013) The vulnerability of flightless ground beetles (Carabidae) to climate change in the Australian tropical rainforest. PhD thesis, James Cook University.

Szczecinski, Natasha (2012) Catch susceptibility and life history of barred javelin (Pomadasys kaakan) in north eastern Queensland, Australia. Masters (Research) thesis, James Cook University.

Templeman, Michelle Anne (2012) Investigating the potential of jellyfishes as marine biomonitors and bioindicators of metal pollution. PhD thesis, James Cook University.

Fingerlos, Franz Martin (2012) Long-term variations in bycatch reduction device (BRD) effectiveness and trawl catch rates in a tropical fish assemblage. Masters (Research) thesis, James Cook University.

Blanchette, Melanie Lise (2012) The ecology of rivers in the Australian dry tropics. PhD thesis, James Cook University.

Myers, Trina Sharlene (2009) Applying semantic technologies and artificial intelligence to eco-informatic modelling of coral reef systems. PhD thesis, James Cook University.

Renagi, Ora (2009) Dispersal patterns and quantities of sediment discharged from the Markham River, Papua New Guinea. PhD thesis, James Cook University.

Magnusson, Marie (2009) Effects of priority herbicides and their breakdown products on tropical, estuarine microalgae of the Great Barrier Reef Lagoon. PhD thesis, James Cook University.

Williamson, David (2009) Fishery effects and benefits of marine protected areas within the Great Barrier Reef Marine Park. PhD thesis, James Cook University.

Blanchette, Melanie Lise (2006) The use of esterase activity as a measure of copper toxicity in marine microalgae. Masters (Research) thesis, James Cook University.

Smith, Luke Darren (2005) Resilience and recovery of coral communities on an isolated reef system in Western Australia following a catastrophic mortality event. PhD thesis, James Cook University.

Hill, Jocelyn K. (2002) Reef Check benthic survey error: a case study on the Great Barrier Reef. Masters (Coursework) thesis, James Cook University.

Berkelmans, Ray (2001) Bleaching, upper thermal limits and temperature adaptation in reef corals. PhD thesis, James Cook University.

Santurtun, Marina (1995) Catch structure and dynamics of Antillean "Z" traps on a coral reef: interaction between trap characteristics and fish behaviour. Masters (Research) thesis, James Cook University.

Rasmussen, Cecily Ellen (1994) Anthropogenic disturbance of environmental signals retained in massive corals. PhD thesis, James Cook University.