Zhang, Jia, Schneller, Nadja M., Field, Matt A., Chan, Cheong Xin, Miller, David J., Strugnell, Jan M., Riginos, Cynthia, Bay, Line, and Cooke, Ira (2024) Chromosomal inversions harbour excess mutational load in the coral, Acropora kenti, on the Great Barrier Reef. Molecular Ecology, 33 (16). e17468.

Calcino, Andrew, Cooke, Ira, Cowman, Peter, Higgie, Megan, Massault, Cecile, Schmitz, Ulf, Whittaker, Maxine, and Field, Matt A. (2024) Harnessing genomic technologies for one health solutions in the tropics. Globalization and Health, 20. 78.

Mason, Benjamin, Hayward, David C., Moya, Aurelie, Cooke, Ira, Sorenson, Alanna, Brunner, Ramona, Andrade Rodriguez, Natalia, Huerlimann, Roger, Bourne, David G., Schaeffer, Patrick, Grinblat, Mila, Ravasi, Timothy, Ueda, Nobuo, Tang, Sen-Lin, Ball, Eldon E., and Miller, David J. (2024) Microbiome manipulation by corals and other Cnidaria via quorum quenching. Current Biology, 34. pp. 3226-3232.

Matias, Ambrosio Melvin A., Popovic, Iva, Thia, Joshua A., Cooke, Ira R., Torda, Gergely, Lukoschek, Vimoksalehi, Bay, Line, Kim, Sun, and Riginos, Cynthia (2023) Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef. Evolutionary Applications, 16 (2). pp. 293-310.

Lau, Sally C. Y., Wilson, Nerida G., Golledge, Nicholas R., Naish, Tim R., Watts, Phillip C., Silva, Catarina N. S., Cooke, Ira R., Allcock, A. Louise, Mark, Felix C., Linse, Katrin, and Strugnell, Jan M. (2023) Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science, 382. pp. 1384-1389.

Whitelaw, Brooke, Finn, Julian K., Zenger, Kyall R., Cooke, Ira R., Morse, Peter, and Strugnell, Jan M. (2023) SNP data reveals the complex and diverse evolutionary history of the blue-ringed octopus genus (Octopodidae: Hapalochlaena) in the Asia-Pacific. Molecular Phylogenetics and Evolution, 186. 107827.

Terrell, Alyx P., Marangon, Emma, Webster, Nicole S., Cooke, Ira, and Quigley, Kate M. (2023) The promotion of stress tolerant Symbiodiniaceae dominance in juveniles of two coral species under simulated future conditions of ocean warming and acidification. Frontiers in Ecology and Evolution, 11. 1113357.

Sidorczuk, Katarzyna, Gagat, Przemyslaw, Pietluch, Filip, Kala, Jakub, Rafacz, Dominik, Bakala, Laura, Slowik, Jadwiga, Kolenda, Rafal, Rodiger, Stefan, Fingerhut, Legana C.H.W., Cooke, Ira R., Mackiewicz, Pawel, and Burdukiewicz, Michal (2022) Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data. Briefings in Bioinformatics, 23 (5). bbac343.

Kuek, Felicity, Motti, Cherie, Zhang, Jia, Cooke, Ira R., Todd, Jonathan D., Miller, David J., Bourne, David G., and Raina, Jean-Baptiste (2022) DMSP production by coral-associated bacteria. Frontiers in Marine Science, 9. 869574.

Zhang, Jia, Richards, Zoe T., Adam, Arne A.S., Chan, Cheong Xin, Shinzato, Chuya, Gilmour, James, Thomas, Luke, Strugnell, Jan M., Miller, David J., and Cooke, Ira (2022) Evolutionary Responses of a Reef-building Coral to Climate Change at the End of the Last Glacial Maximum. Molecular Biology and Evolution, 39 (10). msac201.

Whitelaw, Brooke L., Jones, David B., Guppy, Jarrod, Morse, Peter, Strugnell, Jan M., Cooke, Ira R., and Zenger, Kyall (2022) High-Density Genetic Linkage Map of the Southern Blue-ringed Octopus (Octopodidae: Hapalochlaena maculosa). Diversity, 14 (12). 1068.

Schmidt, Casey A., Cooke, Ira, Wilson, David T., Miller, David J., Peigneur, Steve, Tytgat, Jan, Field, Matthew, Takjoo, Rozita, Smout, Michael J., Loukas, Alex, and Daly, Norelle L. (2022) Newly Discovered Peptides from the Coral Heliofungia actiniformis Show Structural and Functional Diversity. Journal of Natural Products, 85 (7). pp. 1789-1798.

Thomas, Luke, Underwood, Jim N., Rose, Noah H., Fuller, Zachary L., Richards, Zoe T., Dugal, Laurence, Grimaldi, Camille M., Cooke, Ira R., Palumbi, Stephen, and Gilmour, James P. (2022) Spatially varying selection between habitats drives physiological shifts and local adaptation in a broadcast spawning coral on a remote atoll in Western Australia. Science Advances, 8 (17). eabl9185.

Mason, B., Cooke, I., Moya, A., Augustin, R., Lin, M.F., Satoh, N., Bosch, T.C.G., Bourne, D.G., Hayward, D.C., Andrade, N., Forêt, S., Ying, H., Ball, E.E., and Miller, D.J. (2021) AmAMP1 from Acropora millepora and damicornin define a family of coral-specific antimicrobial peptides related to the Shk toxins of sea anemones. Developmental and Comparative Immunology, 114. 103866.

Grinblat, Mila, Cooke, Ira, Shlesinger, Tom, Ben-Zvi, Or, Loya, Yossi, Miller, David J., and Cowman, Peter F. (2021) Biogeography, reproductive biology and phylogenetic divergence within the Fungiidae (mushroom corals). Molecular Phylogenetics and Evolution, 164. 107265.

Bongaerts, Pim, Cooke, Ira R., Ying, Hua, Wels, Dagmar, den Haan, Stijn, Hernandez-Agreda, Alejandra, Brunner, Christopher A., Dove, Sophie, Englebert, Norbert, Eyal, Gal, Foret, Sylvain, Grinblat, Mila, Hay, Kyra B., Harii, Saki, Hayward, David C., Lin, Yu, Morana, Mihaljevi C., Moya, Aurelie, Muir, Paul, Sinniger, Frederic, Smallhorn-West, Patrick, Torda, Gergely, Ragan, Mark A., van Oppen, Madeleine J.M., and Hoegh-Guldberg, Ove (2021) Morphological stasis masks ecologically divergent coral species on tropical reefs. Current Biology, 31 (11). 2286-2298.e8.

Andrade Rodriguez, N., Moya, A., Jones, R., Miller, D.J., and Cooke, I. (2021) The significance of genotypic diversity in coral competitive interaction: a transcriptomic perspective. Frontiers in Ecology and Evolution, 9. 659360.

Whitelaw, Brooke L., Cooke, Ira R., Finn, Julian, da Fonseca, Rute R., Ritschard, Elena A., Gilbert, M. T. P., Simakov, Oleg, and Strugnell, Jan M. (2020) Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss. GigaScience, 9 (11). giaa120.

Shiel, Brett P., Cooke, Ira R., Hall, Nathan E., Robinson, Nicholas A., and Strugnell, Jan M. (2020) Gene expression differences between abalone that are susceptible and resilient to a simulated heat wave event. Aquaculture, 526. 735317.

Mohamed, Amin R., Chan, Cheong Xin, Ragan, Mark A., Zhang, Jia, Cooke, Ira, Ball, Eldon E., and Miller, David J. (2020) Comparative transcriptomic analyses of Chromera and Symbiodiniaceae. Environmental Microbiology Reports, 12 (4). pp. 534-443.

Cooke, Ira, Ying, Hua, Forêt, Sylvain, Bongaerts, Pim, Strugnell, Jan M., Simakov, Oleg, Zhang, Jia, Field, Matt A., Rodriguez-Lanetty, Mauricio, Bell, Sara C., Bourne, David G., van Oppen, Madeleine J.H., Ragan, Mark A., and Miller, David J. (2020) Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts. Science Advances, 6 (48). eabc6318.

Schmidt, Casey A., Wilson, David T., Cooke, Ira, Potriquet, Jeremy, Tungatt, Katie, Muruganandah, Visai, Boote, Chloe, Kuek, Felicity, Miles, John J., Kupz, Andreas, Ryan, Stephanie, Loukas, Alex, Bansal, Paramjit S., Takjoo, Rozita, Miller, David J., Peigneur, Steve, Tytgat, Jan, and Daly, Norelle (2020) Identification and characterization of a peptide from the stony coral Heliofungia actiniformis. Journal of Natural Products, 83 (11). pp. 3454-3463.

Caruana, Nikeisha J., Strugnell, Jan M., Finn, Julian, Faou, Pierre, Plummer, Kim M., and Cooke, Ira R. (2020) Quantitative proteomic analysis of the slime and ventral mantle glands of the Striped Pyjama squid (Sepioloidea lineolata). Journal of Proteome Research, 19. pp. 1491-1501.

Fingerhut, Legana C. H. W., Miller, David J., Strugnell, Jan M., Daly, Norelle L., and Cooke, Ira R. (2020) ampir: an R package for fast genome-wide prediction of antimicrobial peptides. Bioinformatics, 36 (21). btaa653.

Caruana, Nikeisha J., Strugnell, Jan M., Faou, Pierre, Finn, Julian, and Cooke, Ira R. (2019) Comparative proteomic analysis of slime from the striped pyjama squid, Sepioloidea lineolata, and the southern bottletail squid, Sepiadarium austrinum (Cephalopoda: Sepiadariidae). Journal of Proteome Research, 18 (3). pp. 890-899.

Ritschard, Elena A., Whitelaw, Brooke, Albertin, Caroline B., Cooke, Ira R., Strugnell, Jan M., and Simakov, Oleg (2019) Coupled genomic evolutionary histories as signatures of organismal innovations in Cephalopods co-evolutionary signatures across levels of genome organization may shed light on functional linkage and origin of Cephalopod novelties. BioEssays, 41. 1900073.

Cooke, Ira, Mead, Oliver, Whalen, Casey, Boote, Chloe, Moya, Aurelie, Ying, Hua, Robbins, Steven, Strugnell, Jan M., Darling, Aaron, Miller, David, Voolstra, Christian, and Adamska, Maya (2019) Molecular techniques and their limitations shape our view of the holobiont. Zoology, 137. 125695.

Jaspers, Cornelia, Fraune, Sebastian, Arnold, A. Elizabeth, Miller, David J., Bosch, Thomas C.G., Voolstra, Christian R., Adamska, Maja, Ainsworth, Tracy, Ball, Eldon, Boote, Chlöe, Bourne, David, Butterfield, Nicholas J., Chan, Cheong Xin, Cooke, Ira, Cowman, Peter F., Darling, Aaron, Davy, Simon K., Mohamed, Amin, Fabricius, Katharina, Valero Fortunato, Sofia V., Hernandez Agreda, Alejandra, Hoogenboom, Mia, Moya, Aurelie, Pita, Lucia, Ragan, Mark A., Robbins, Steven J., Andrade Rodriguez, Natalia R., Sakamaki, Kazuhiro, Schoepf, Verena, Seemann, Thorsten, Shinzato, Chuya, Stolarski, Jarosław, Strugnell, Jan, Takahashi, Shunichi, Tang, Sen-Lin, Webster, Nicole N, Whitelaw, Brooke, and Ying, Hua (2019) Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches. Zoology, 133. pp. 81-87.

Whitelaw, Brooke L., Cooke, Ira R., Finn, Julian, Zenger, Kyall, and Strugnell, J.M. (2019) The evolution and origin of tetrodotoxin acquisition in the blue-ringed octopus (genus Hapalochlaena). Aquatic Toxicology, 206. pp. 114-122.

Robbins, Steven J., Singleton, Caitlin M., Chan, Cheong Xin, Messer, Lauren F., Geers, Aileen U., Ying, Hua, Baker, Alexander, Bell, Sara C., Morrow, Kathleen M., Ragan, Mark A., Miller, David J., Forêt, Sylvain, Voolstra, Christian R., Tyson, Gene W., Bourne, David G., Ball, Eldon, Beeden, Roger, Berumen, Michael, Aranda, Manuel, Ravasi, Timothy, Bongaerts, Pim, Hoegh-Guldberg, Ove, Cooke, Ira, Leggat, Bill, Sprungala, Susanne, Fitzgerald, Anna, Shang, Catherine, Lundgren, Petra, Fyffe, Theresa, Rubino, Francesco, van Oppen, Madeleine, Weynberg, Karen, and Bells, Sara C. (2019) A genomic view of the reef-building coral Porites lutea and its microbial symbionts. Nature Microbiology, 4 (12). pp. 2090-2100.

Ying, Hua, Hayward, David C., Cooke, Ira, Wang, Weiwen, Moya, Aurelie, Siemering, Kirby R., Sprungala, Susanne, Ball, Eldon E., Foret, Sylvain, and Miller, David J. (2019) The whole-genome sequence of the coral Acropora millepora. Genome Biology and Evolution, 11 (5). pp. 1374-1379.

Ying, Hua, Cooke, Ira, Sprungala, Susanne, Wang, Weiwen, Hayward, David C., Tang, Yurong, Huttley, Gavin, Ball, Eldon E., Forêt, Sylvain, and Miller, David J. (2018) Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages. Genome Biology, 19. 175.

Nuez-Ortín, Waldo G., Carter, Chris G., Nichols, Peter D., Cooke, Ira R., and Wilson, Richard (2018) Liver proteome response of pre-harvest Atlantic salmon following exposure to elevated temperature. BMC Genomics, 19. 133.

Woodings, Laura N., Murphy, Nicholas P., Doyle, Stephen R., Hall, Nathan E., Robinson, Andrew J., Liggins, Geoffrey W., Green, Bridget S., Cooke, Ira R., Bell, James J., and Strugnell, Jan M. (2018) Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi. Marine Biology, 165 (12). 185.

Fingerhut, Legana C.H.W., Strugnell, Jan M., Faou, Pierre, Labiaga, Àlvaro Roura, Zhang, Jia, and Cooke, Ira R. (2018) Shotgun proteomics analysis of saliva and salivary gland tissue from the common octopus Octopus vulgaris. Journal of Proteome Research, 17 (11). pp. 3866-3876.

Shiel, Brett P., Cooke, Ira R., Hall, Nathan E., Robinson, Nicholas A., and Strugnell, Jan M. (2018) Summer mortality in molluscs: the genetic basis for resilience and susceptibility. In: Breeding Focus 2018. pp. 59-79. From: Breeding Focus 2018: reducing heat stress, 19-20 September 2018, Armidale, NSW, Australia.

Liu, Huanle, Stephens, Timothy G., González-Pech, Raúl A., Beltran, Victor H., Lapeyre, Bruno, Bongaerts, Pim, Cooke, Ira, Aranda, Manuel, Bourne, David G., Forêt, Sylvain, Miller, David J., van Oppen, Madeleine J.H., Voolstra, Christian R., Ragan, Mark A., and Chan, Cheong Xin (2018) Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis. Communications Biology, 1. 95.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., Stone, David A.J., and Strugnell, Jan M. (2017) The effect of commercial, natural and grape seed extract supplemented diets on gene expression signatures and survival of greenlip abalone (Haliotis laevigata) during heat stress. Aquaculture, 479. pp. 798-807.

Cameron, Timothy C., Cooke, Ira, Faou, Pierre, Toet, Hayley, Piedrafita, David, Young, Neil, Rathinasamy, Vignesh, Beddoe, Travis, Anderson, Glenn, Dempster, Robert, and Spithill, Terry W. (2017) A novel ex vivo immunoproteomic approach characterising Fasciola hepatica tegumental antigens identified using immune antibody from resistant sheep. International Journal for Parasitology, 47 (9). pp. 555-567.

Lin, Mei-Fang, Moya, Aurelie, Ying, Hua, Chen, Chaolun Allen, Cooke, Ira, Ball, Eldon E., Forȇt, Sylvain, and Miller, David J. (2017) Analyses of corallimorpharian transcriptomes provide new perspectives on the evolution of calcification in the Scleractinia (corals). Genome Biology and Evolution, 9 (1). pp. 150-160.

Dagonnier, Marie, Cooke, Ira Robin, Faou, Pierre, Sidon, Tara Kate, Dewey, Helen Margaret, Donnan, Geoffrey Alan, and Howells, David William (2017) Discovery and longitudinal evaluation of candidate biomarkers for ischaemic stroke by mass spectrometry-based proteomics. Biomarker Insights, 12.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., and Strugnell, Jan M. (2017) Epipodial tentacle gene expression and predetermined resilience to summer mortality in the commercially important greenlip abalone, Haliotis laevigata. Marine Biotechnology, 19 (2). pp. 191-205.

Schneider, Maria Victoria, Griffin, Phillippa C., Tyagi, Sonika, Flannery, Madison, Dayalan, Saravanan, Gladman, Simon, Watson-Haigh, Nathan, Bayer, Philipp E., Charleston, Michael, Cooke, Ira, Cook, Rob, Edwards, Richard J., Edwards, David, Gorse, Dominique, McConville, Malcolm, Powell, David, Wilkins, Marc R., and Lonie, Andrew (2017) Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia. Briefings in Bioinformatics, 2017.

Nuez-Ortin, Waldo G., Carter, Chris G., Wilson, Richard, Cooke, Ira R., Amoroso, Gianluca, Cobcroft, Jennifer M., and Nichols, Peter D. (2017) Triploid Atlantic salmon shows similar performance, fatty acid composition and proteome response to diploids during early freshwater rearing. Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 22. pp. 67-77.

Chambers, Matthew C., Jagtop, Pratik D., Johnson, James E., McGowan, Thomas, Kumar, Praveen, Onsongo, Getiria, Guerrero, Candace R., Barsnes, Harald, Vaudel, Marc, Martens, Lennart, Grüning, Björn, Cooke, Ira, Heydarian, Mohammad, Reddy, Karen L., and Griffin, Timothy J. (2017) An accessible proteogenomics informatics resource for cancer researchers. Cancer Research, 77 (21). E43-E46.

Shafee, Thomas, and Cooke, Ira (2016) AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments. BMC Bioinformatics, 17 (1). pp. 1-6.

Whitelaw, Brooke Lauren, Strugnell, Jan M., Faou, Pierre, da Fonseca, Rute R., Hall, Nathan, Norman, Mark, Finn, Julian, and Cooke, Ira Robin (2016) Combined transcriptomic and proteomic analysis of the posterior salivary gland from the southern blue-ringed octopus and the southern sand octopus. Journal of Proteome Research, 15 (9). pp. 3284-3297.

Nuez Ortin, Waldo, Carter, Chris G., Wilson, Richard, Cooke, Ira, and Nichols, Peter D. (2016) Preliminary validation of a high docosahexaenoic acid (DHA) and -linolenic acid (ALA) dietary oil blend: tissue fatty acid composition and liver proteome response in Atlantic salmon (Salmo salar) smolts. PLoS ONE, 11 (8). e0161513. pp. 1-27.

Caruana, Nikeisha J., Cooke, Ira R., Faou, Pierre, Finn, Julian, Hall, Nathan E., Norman, Mark, Pineda, Sandy S., and Strugnell, Jan M. (2016) A combined proteomic and transcriptomic analysis of slime secreted by the southern bottletail squid, Sepiadarium austrinum (Cephalopoda). Journal of Proteomics, 148. pp. 170-182.

Robinson, Nick A., Hall, Nathan E., Ross, Elizabeth M., Cooke, Ira R., Shiel, Brett P., Robinson, Andrew J., and Strugnell, Jan M. (2016) The complete mitochondrial genome of Haliotis laevigata (Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing. Mitochondrial DNA Part A: DNA mapping, sequencing and analysis, 27. pp. 437-438.

Hall, Nathan E., Hanzak, Jan, Allcock, A. Louise, Cooke, Ira R., Ogura, Atsushi, and Strugnell, Jan M. (2016) The complete mitochondrial genome of the pygmy squid, Idiosepius (Cephalopoda: Decapodiformes): the first representative from the family Idiosepiidae. Mitochondrial DNA Part A: DNA mapping, sequencing and analysis, 27 (1). pp. 5-6.

Nguyen, Vinh A., Carey, Leeanne M., Giummarra, Loretta, Faou, Pierre, Cooke, Ira, Howells, David W., Tse, Tamara, Macaulay, S. Lance, Ma, Henry, Davis, Stephen M., Donnan, Geoffrey A., and Crewther, Sheila G. (2016) A pathway proteomic profile of ischemic stroke survivors reveals innate immune dysfunction in association with mild symptoms of depression: a pilot study. Frontiers in Neurology, 7. 85. pp. 1-16.

Murugesan, Selvaraaju, Tay, David B.H., Cooke, Ira, and Faou, Pierre (2015) Application of dual tree complex wavelet transform in tandem mass spectrometry. Computers in Biology and Medicine, 63. pp. 36-41.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A, and Strugnell, Jan M. (2015) De novo characterisation of the greenlip abalone transcriptome (Haliotis laevigata) with a focus on the heat shock protein 70 (HSP70) family. Marine Biotechnology, 17. pp. 23-32.

Boekel, Jorrit, Chilton, John, Cooke, Ira, Horvatovich, Peter, Jagtap, Pratik, Kall, Lukas, Lehtiö, Janne, Lukasse, Pieter, Moerland, Perry, and Griffin, Timothy (2015) Multi-omic data analysis using Galaxy. Nature Biotechnology, 33. pp. 137-139.

Cooke, Ira R., Whitelaw, Brooke, Norman, Mark, Caruana, Nikeisha, and Strugnell, Jan (2015) Toxicity in cephalopods. In: Gopalakrishnakone, P., and Malhotra, Anita, (eds.) Evolution of Venomous Animals and Their Toxins. Toxinology . Springer, Leiden, The Netherlands, pp. 1-15.

Cooke, Ira R, Jones, Dan, Bowen, Joanna K, Deng, Cecilia, Faou, Pierre, Hall, Nathan E, Jayachandran, Vignesh, Liem, Michael, Taranto, Adam P, Plummer, Kim M, and Mathivanan, Suresh (2014) Proteogenomic analysis of the Venturia pirina (pear scab fungus) secretome reveals potential effectors. Journal of Proteome Research, 13 (8). pp. 3635-3644.

Cooke, Ira R., Mattison, Elizabeth H.A., Audsley, Eric, Bailey, Alison P., Freckleton, Robert P., Graves, Anil R., Morris, Joe, Queenborough, Simon A., Sandars, Daniel L., Siriwardena, Gavin M., Trawick, Paul, Watkinson, Andrew R., and Sutherland, William J. (2013) Empirical test of an agricultural landscape model: the importance of farmer preference for risk aversion and crop complexity. SAGE Open, 3. pp. 1-16.

Robinson, Nick, Smith, Ben, Cooke, Ira, and Strugnell, Jan (2013) A snail's pace: a preliminary analysis of the effects of stress and genetics on movement of Haliotis. Aquaculture, 376-379. pp. 25-35.

Appleby, Sarah L., Cockshell, Michaelia P., Pippal, Jyotsna B., Thompson, Emma J., Barrett, Jeffrey M., Tooley, Katie, Sen, Shaundeep, Sun, Wai Yan, Grose, Randall, Nicholson, Ian, Levina, Vitalina, Cooke, Ira, Talbo, Gert, Lopez, Angel F., and Bonder, Claudine S. (2012) Characterization of a distinct population of circulating human non-adherent endothelial forming cells and their recruitment via intercellular adhesion molecule-3. PLoS ONE, 7 (11). e46996.

Siriwardena, Gavin M., Cooke, Ira R., and Sutherland, William J. (2012) Landscape, cropping and field boundary influences on bird abundance. Ecography, 35 (2). pp. 162-173.

Allcock, A. Louise, Cooke, Ira R., and Strugnell, Jan M. (2011) What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda? Zoological Journal of the Linnean Society, 161 (3). pp. 573-586.