Vu, Nguyen Thanh, Shen, Xueyan, Kueh, Susan, Carrai, Maura, Terence, Celestine, Poon, Zhi Weng Josiah, Nelson, Sarah Priyanka, Senapin, Saengchan, Dong, Ha Thanh, Loh, James, Jerry, Dean R., and Domingos, Jose A. (2026) Microbiome and Pathobiome Characterization in Farmed Barramundi (Lates calcarifer) During and Post Scale Drop Disease Outbreaks. Journal of Fish Diseases. e70225. (In Press)

Poon, Zhi Weng Josiah, Vu, Nguyen Thanh, Shen, Xueyan, Gibson-Kueh, Susan, Carrai, Maura, Nelson, Sarah Priyanka, Terence, Celestine, Oh, Joseph, Seah, Theophilus, Tan, Ying Quan, Awate, Sunita, Dong, Ha Thanh, Senapin, Saengchan, Tan, Marie R., Vij, Shubha, Jones, David B., Jerry, Dean R., and Domingos, Jose A. (2026) Cross-environment genomic prediction of scale drop disease resistance in barramundi (Lates calcarifer) using laboratory challenge and farm survival data. Aquaculture, 621. 744030.

Shen, Xueyan, Gibson-Kueh, Susan, Nelson, Sarah Priyanka, Poon, Zhi Weng Josiah, Terence, Celestine, Vu, Nguyen Thanh, Carrai, Maura, Awate, Sunita, Vij, Shubha, Tan, Marie R., Jerry, Dean R., and Domingos, Jose A. (2026) Scale Drop Disease Virus (SDDV) infection induces intestinal dysbiosis and secondary Vibrio expansion in Asian seabass (Lates calcarifer). Fish and Shellfish Immunology, 174. 111344.

Shen, Xueyan, Yu, Xiong Da, Xie, Shangzhe, Hsu, Chia Da, Domingos, Jose A., and Gibson-Kueh, Susan (2026) Temporal microbiome dynamics and fish health-associated dysbiosis in freshwater aquarium systems: a case study from River Wonders Singapore. Frontiers In Microbiology, 17. 1739391.

Sean, Afifah, Lim, Tzer Shyun, Domingos, Jose A., Uichanco, Joseph A., Shen, Xueyan, and Gibson-Kueh, Susan (2025) Air Nanobubbles Enhance Viable Bacteria Counts, Abundance of Nitrifying Bacteria, and Reduce Nitrite Levels in Marine Recirculation Aquaculture Systems. Fishes, 10 (11). 550. pp. 1-16.

Terence, Celestine, Poon, Zhi Weng Josiah, Senapin, Saengchan, Dong, Ha Thanh, Clarke, Shannon M., Brauning, Rudiger, Dodds, Ken G., Thanh Vu, Nguyen, Shen, Xueyan, Gibson-Kueh, Susan, Jerry, Dean R., and Domingos, Jose A. (2025) Beyond genotyping: Using ddRADseq GBS for pathogen surveillance in aquaculture – A case study in Barramundi (Lates calcarifer). Aquaculture Reports, 46. 103273.

Poon, Zhi Weng Josiah, Vu, Nguyen Thanh, Shen, Xueyan, Gibson-Kueh, Susan, Carrai, Maura, Nelson, Sarah Priyanka, Terence, Celestine, Tan, Ying Quan, Awate, Sunita, Dong, Ha Thanh, Senapin, Saengchan, Tan, Marie R., Vij, Shubha, Jones, David B., Jerry, Dean R., and Domingos, Jose A. (2025) Genomic prediction of scale drop disease resistance in barramundi Lates calcarifer under controlled laboratory conditions. Aquaculture, 612. 743250.

Goh, Charlene, Gibson-Kueh, Susan, Bal, David, Chen, I.-Tung, Nuez-Ortín, Waldo, Domingos, Jose A., and Shen, Xueyan (2025) A synergistic blend of dietary organic acids, monoglycerides and phytobiotics enhance growth performance, intestinal mucosal height, and anti-viral immune gene expression in juvenile Barramundi (Lates calcarifer). Aquaculture Reports, 41. 102692.

Kwok, Aidan, Domingos, Jose A., Oh, Joseph, Chan, Piero, Ong, Joyce, Nankervis, Leo, Ling, Jeffrey, Nichol, Robert, and Gibson-Kueh, Susan (2024) The Pathology and Blood Biochemistry of Juvenile Lates calcarifer on Diets Contaminated With Mycotoxins, Histamines and Rancid Fats - A Case Study. Journal of Fish Diseases. e14034. (In Press)

Chew, Xian Zhe, Carrai, Maura, Shen, Xueyan, and Gibson-Kueh, Susan (2024) Impact of transport conditions and underlying disease on post-stocking survival of juvenile Lates calcarifer. Journal of Fish Diseases, 47 (8). e13963.

Chew, Xian Zhe, Gibson-Kueh, Susan, Jerry, Dean R., and Shen, Xueyan (2023) Comparison of intestinal bacterial communities in asymptomatic and diseased Asian seabass (Lates calcarifer) with chronic enteritis and mixed bacterial infections. Aquaculture, 572. 739516.

Chew, Xian Zhe, and Gibson-Kueh, Susan (2023) The haematology of clinically healthy, farmed juvenile Asian seabass (Lates calcarifer Bloch)-reference intervals, and indicators of subclinical disease. Journal of Fish Diseases, 46 (10). pp. 1109-1124.

Gibson-Kueh, S., Awate, S., and Schrittwieser, M (2023) The pathology of Lates calcarifer herpesviral disease—Disseminated intravascular coagulation explains mortality spikes. Journal of Fish Diseases, 46 (8). pp. 861-871.

Terence, Celestine, Domingos, Jose A., Angelo Uichanco, Joseph, Monteil, Yann, Monteil, Loïc, De Braux, Emmanuel, Banh, Quyen Q.T., Gibson-Kueh, Susan, and Jerry, Dean R. (2021) Early sex change of barramundi Lates calcarifer farmed in Singapore. Aquaculture Reports, 20. 100712.

Gibson-Kueh, Susan, Terence, Celestine, Chew, Xian Zhe, Uichanco, Joseph Angelo, and Shen, Xueyan (2021) PCR, in-situ hybridization, and phylogenetic analysis suggest that ‘big belly’ disease in barramundi, Lates calcarifer (Bloch), is caused by a novel Vibrio species. Journal of Fish Diseases, 44 (12). pp. 1985-1992.

Domingos, Jose A., Shen, Xueyan, Terence, Celestine, Senapin, Saengchan, Dong, Ha Thanh, Tan, Marie R., Gibson-Kueh, Susan, and Jerry, Dean R. (2021) Scale Drop Disease Virus (SDDV) and Lates calcarifer Herpes Virus (LCHV) coinfection downregulate immune-relevant pathways and cause splenic and kidney necrosis in barramundi under commercial farming conditions. Frontiers in Genetics, 12. 666897.

Gibson-Kueh, Susan, and Uichanco, Joseph Angelo (2021) The pathology associated with putative algal toxicosis in red snapper, Lutjanus species (Bloch 1790). Journal of Fish Diseases, 44 (6). pp. 857-861.

Zorin, Boris, Gibson-Kueh, Susan, and Zilberg, Dina (2019) A novel treatment against the monogenean parasite, Gyrodactylus turnbulii, infecting guppies (Poecilia reticulata), using a plant-based commercial insecticide Timor C. Aquaculture, 501. pp. 313-318.

Kelly, E., Martin, P.A.J., Gibson-Kueh, S., Morgan, D.L., Ebner, B.C., Donaldson, J., Buller, N., Crook, D.A., Brooks, S., Davis, Aaron, Hammer, M.P., Foyle, L., Hair, S., and Lymbery, A.J. (2018) First detection of Edwardsiella ictaluri (Proteobacteria: Enterobacteriaceae) in wild Australian catfish. Journal of Fish Diseases, 41 (2). pp. 199-208.

Kelly, Erin, Barbosa, Amanda D., Gibson-Kueh, Susan, and Lymbery, Alan J. (2018) Haematozoa of wild catfishes in northern Australia. International Journal for Parasitology: Parasites and Wildlife, 7 (1). pp. 12-17.

Chin, H. N., Loh, R., Hong, Y. C., and Gibson-Kueh, S. (2017) Case studies of spinal deformities in ornamental koi, Cyprinus carpio L. Journal of Fish Diseases, 40 (1). pp. 65-71.

Zahedi, Alireza, Durmic, Zoey, Gofton, Alexander W., Kueh, Susan, Austen, Jill, Lawson, Malcolm, Callahan, Lauren, Jardine, John, and Ryan, Una (2017) Cryptosporidium homai n. sp. (Apicomplexa: Cryptosporidiiae) from the guinea pig (Cavia porcellus). Veterinary Parasitology, 245. pp. 92-101.

Paparini, Andrea, Yang, Rongchang, Chen, Linda, Tong, Kaising, Gibson-Kueh, Susan, Lymbery, Alan, and Ryan, Una M. (2017) Cryptosporidium in fish: alternative sequencing approaches and analyses at multiple loci to resolve mixed infections. Parasitology, 144 (13). pp. 1811-1820.

Kelly, E., and Gibson-Kueh, S. (2017) Renal mucous production in Australian freshwater plotosid and ariid catfishes. Journal of Fish Biology, 90 (1). pp. 435-442.

Kelly, Erin, Travouillon, Kenny J., Keleher, James, Gibson-Kueh, Susan, and Morgan, David L. (2016) Mammal predation by an ariid catfish in a dryland river of Western Australia. Journal of Arid Environments, 135. pp. 9-11.

Kelly, E., Gibson-Kueh, S., Ebner, B.C., Donaldson, J.A., Yang, R., Buller, N., Hair, S., Morgan, D.L., and Lymbery, A.J. (2016) Observations on the health of Tandanus tropicanus (Teleostei: Plotosidae) from an Australian river system. Australian Zoologist, 38 (1). pp. 83-89.

Ryan, Una, Paparini, Andrea, Tong, Kaising, Yang, Rongchang, Gibson-Kueh, Susan, O'Hara, Amanda, Lymbery, Alan, and Xiao, Lihua (2015) Cryptosporidium huwi n. sp. (Apicomplexa: Eimeriidae) from the guppy (Poecilia reticulata). Experimental Parasitology, 150. pp. 31-35.

Yang, Rongchang, Palermo, Cindy, Chen, Linda, Edwards, Amanda, Paparini, Andrea, Tong, Kaising, Gibson-Kueh, Susan, Lymbery, Alan, and Ryan, Una (2015) Genetic diversity of Cryptosporidium in fish at the 18S and actin loci and high levels of mixed infections. Veterinary Parasitology, 214 (3-4). pp. 255-263.

Kelly, E., and Gibson-Kueh, S. (2015) The haematology of six species of native catfish from northern Australia. Australian Journal of Zoology, 63 (5). pp. 293-299.

Morine, M., Yang, R., Ng, J., Kueh, S., Lymbery, A. J., and Ryan, U. M. (2012) Additional novel Cryptosporidium genotypes in ornamental fishes. Veterinary Parasitology, 190 (3-4). pp. 578-582.

Gibson-Kueh, S., Chee, D., Chen, J., Wang, Y. H., Tay, S., Leong, L. N., Ng, M. L., Jones, J. B., Nicholls, P. K., and Ferguson, H. W. (2012) The pathology of 'scale drop syndrome' in Asian seabass, Lates calcarifer Bloch, a first description. Journal of Fish Diseases, 35 (1). pp. 19-27.

Gibson-Kueh, S., Thuy, N.T.N., Elliot, A., Jones, J.B., Nicholls, P.K., and Thompson, R.C.A. (2011) An intestinal Eimeria infection in juvenile Asian seabass (Lates calcarifer) cultured in Vietnam - a first report. Veterinary Parasitology, 181 (2-4). pp. 106-112.

Gibson-Kueh, S., Yang, R., Thuy, N. T. N., Jones, J. B., Nicholls, P. K., and Ryan, U. (2011) The molecular characterization of an Eimeria and Cryptosporidium detected in Asian seabass (Lates calcarifer) cultured in Vietnam. Veterinary Parasitology, 181 (2-4). pp. 91-96.

Dixon, P.F., Ngoh, G.-H., Stone, D.M., Chang, S.F., Way, K., and Kueh, S. (2008) Proposal for a fourth aquabirnavirus serogroup. Archives of Virology, 153. pp. 1937-1941.

Gibson-Kueh, S., Crumlish, M., and Ferguson, H. W. (2004) A novel 'skinny pot-belly' disease in Asian seabass fry, Lates calcarifer (Bloch). Journal of Fish Diseases, 27 (12). pp. 731-735.

Gibson-Kueh, S., Ngoh-Lim, G. H., Netto, P., Kurita, J., Nakajima, K., and Ng, M. L. (2004) A systemic iridoviral disease in mullet, Mugil cephalus L., and tiger grouper, Epinephelus fuscoguttatus Forsskal: a first report and study. Journal of Fish Diseases, 27 (12). pp. 693-699.

Qin, Q. W., Chang, S. F., Ngoh-Lim, G. H., Gibson-Kueh, S., Shi, C., and Lam, T. J. (2003) Characterization of a novel ranavirus isolated from grouper Epinephelus tauvina. Diseases of Aquatic Organisms, 53 (1). pp. 1-9.

Gibson-Kueh, S., Netto, P., Ngoh-Lim, G. H., Chang, S. F., Ho, L. L., Qin, Q. W., Chua, F. H. C., Ng, M. L., and Ferguson, H. W. (2003) The pathology of systemic iridoviral disease in fish. Journal of Comparative Pathology, 129 (2-3). pp. 111-119.

Chang, S. F., Ngoh-Lim, G. H., Kueh, L. F. S., Qin, Q. W., Seng, E. K., and Sin, Y. M. (2002) Initial investigations into two viruses isolated from marine food fish in Singapore. Veterinary Record, 150 (1). pp. 15-16.

Chang, S. F., Ngoh, G. H., Kueh, L. F. S., Qin, Q. W., Chen, C. L., Lam, T. J., and Sin, Y. M. (2001) Development of a tropical marine fish cell line from asian seabass (lates calcarifer) for virus isolation. Aquaculture, 192 (2-4). pp. 133-145.