Article

Sharma, Mridula, McFarlane, Craig, Kambador, Ravi, Kukreti, Himani, Bonala, Sabeera, and Srinivasan, Shruti (2015) Myostatin: expanding horizons. IUBMB Life, 67 (8). pp. 589-600.

Vangaveti, Venkat N., Shashidar, Venkatesh M., Rush, Catherine, Malabu, Usman H., Rasalam, Roy R., Collier, Fiona, Baune, Bernhard T., and Kennedy, Richard L. (2014) Hydroxyoctadecadienoic acids regulate apoptosis in human THP-1 cells in a PPARγ-dependent manner. Lipids, 49 (12). pp. 1181-1192.

Gaballa, Ahmed, Chi, Bui Khanh, Roberts, Alexandra A., Becher, Dörte, Hamilton, Chris J., Antelmann, Haike, and Helmann, John D. (2014) Redox regulation in Bacillus subtilis: the bacilliredoxins BrxA(YphP) and BrxB(YqiW) function in de-bacillithiolation of S-bacillithiolated OhrR and MetE. Antioxidants & Redox Signaling, 21 (3). pp. 357-367.

Luan, Hemi, Meng, Nan, Fu, Jin, Chen, Xiaomin, Xu, Xun, Feng, Qiang, Jiang, Hui, Dai, Jun, Yuan, Xune, Lu, Yanping, Roberts, Alexandra A., Luo, Xiao, Chen, Maoshan, Xu, Shengtao, Li, Jun, Hamilton, Chris J., Fang, Chengxiang, and Wang, Jun (2014) Genome-wide transcriptome and antioxidant analyses on gamma-irradiated phases of Deinococcus Radiodurans R1. PLoS ONE, 9 (1). e85649. pp. 1-11.

Posada, Ana C., Kolar, Stacey L., Dusi, Renata G., Francois, Patrice, Roberts, Alexandra A., Hamilton, Chris J., Liu, George Y., and Cheung, Ambrose (2014) Importance of bacillithiol in the oxidative stress response of Staphylococcus aureus. Infection and Immunity, 82 (1). pp. 316-332.

Tolentino, Rebecca, Chastain, Chris, and Burnell, Jim (2013) Identification of the amino acid involved in the regulation of bacterial pyruvate, orthophosphate dikinase and phosphoenolpyruvate synthetase. Advances in Biological Chemistry, 3 (3A). pp. 12-21.

Chi, Bui Khanh, Roberts, Alexandra A., Huyen, Tran Thi Thanh, Bäsell, Katrin, Becher, Dorte, Albrecht, Dirk, Hamilton, Chris J., and Antelmann, Haike (2013) S-bacillithiolation protects conserved and essential proteins against hypochlorite stress in Firmicutes bacteria. Antioxidants & Redox Signaling, 18 (11). pp. 1273-1295.

Muhamad, N., Walker, L.R., Simcock, D.C., Pedley, K.C., Simpson, H.V., and Brown, S. (2013) Urea output by L3 Teladorsagia circumcincta and some properties of two urea producing enzymes. Iranian Journal of Parasitology, 8 (1). pp. 137-144.

Bartlett, Sofia, Seeliger, Janine, and Burnell, Jim N. (2012) Identification of critical residues in the bifunctional phosphoenolpyruvate synthetase kinase/phosphotransferase of Escherichia coli. Current Topics in Biochemical Research, 14 (1). pp. 77-83.

Muhamad, Noorzaid, Walker, Lisa R., Pedley, Kevin C., Simcock, David C., and Brown, Simon (2012) The initial kinetics of NH3/NH4+ efflux from L3Teladorsagia circumcincta. Parasitology International, 61 (3). pp. 487-492.

Lokireddy, Sudarsanareddy, Wijesoma, Isuru Wijerupage, Sze, Siu Kwan, McFarlane, Craig, Kambadur, Ravi, and Sharma, Mridula (2012) Identification of atrogin-1-targeted proteins during the myostatin-induced skeletal muscle wasting. American Journal of Physiology: cell physiology, 303 (5). C512-C529.

Zhang, C., McFarlane, C., Lokireddy, S., Masuda, S., Ge, X., Gluckman, P.D., Sharma, M., and Kambadur, R. (2012) Inhibition of myostatin protects against diet-induced obesity by enhancing fatty acid oxidation and promoting a brown adipose phenotype in mice. Diabetologia, 55 (1). pp. 183-193.

Brown, Simon, and Simcock, David C. (2012) On the thermodynamics of fatty acid oxidation. Banat's Journal of Biotechnology, 3 (5). pp. 3-9.

Astley, Holly M., Parsley, Kate, Aubry, Sylvain, Chastain, Chris J., Burnell, Jim N., Webb, Michael E., and Hibberd, Julian M. (2011) The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis are both bifunctional and interact with the catalytic and nucleotide-binding domains of pyruvate, orthophosphate dikinase. The Plant Journal, 68 (6). pp. 1070-1080.

Brown, Simon, and Simcock, David C. (2011) Half a century of the chemiosmotic hypothesis and the practice of science. Orbital, 3 (3). pp. 174-179.

Ezzeddine , Nader, Chen, Jiandong, Waltenspiel, Bernhard, Burch, Brandon, Albrecht , Todd, Zhuo, Ming, Warren, William D., Marzluff, William F., and Wagner, Eric J. (2011) A subset of Drosophila Integrator Proteins is essential for efficient U7 snRNA and Spliceosomal snRNA 3'-end formation. Molecular and Cellular Biology, 31 (2). pp. 328-341.

Hoogenboom, Mia, Armstrong, John D., Miles, Mike S., Burton, Tim, Groothuis, Ton G. G., and Metcalfe, Neil B. (2011) Implantation of cocoa butter reduces egg and hatchling size in Salmo trutta. Journal of Fish Biology, 79 (3). pp. 587-596.

Sriram, Sandhya, Subramanian, Subha, Sathiakumar, Durga, Venkatesh, Rithika, Salerno, Monica S., McFarlane, Craig, Kambadur, Ravi, and Sharma, Mridula (2011) Modulation of reactive oxygen species in skeletal muscle by myostatin is mediated through NF-κB. Aging Cell, 10 (6). pp. 931-948.

Zhang, C., McFarlane, C., Lokireddy, S., Bonala, S., Ge, X., Masuda, S., Gluckman, P.D., Sharma, M., and Kambadur, R. (2011) Myostatin-deficient mice exhibit reduced insulin resistance through activating the AMP-activated protein kinase signalling pathway. Diabetologia, 54 (6). pp. 1491-1501.

Steiner, Johann, Sarnyai, Zoltan, Westphal, Sabine, Gos, Tomasz, Bernstein, Hans-Gert, Bogerts, Bernhard, and Keilhoff, Gerburg (2011) Protective effects of haloperidol and clozapine on energy-deprived OLN-93 oligodendrocytes. European Archives of Psychiatry and Clinical Neuroscience, 126 (7). pp. 477-482.

Tolentino, Rebecca, and Burnell, Jim (2011) A fourth level of regulation of PEP synthetase in Escherichia coli; implications of ADP-dependent inactivation. Current Topics in Biochemical Research, 13 (2). pp. 27-38.

Tems, Ursula, and Burnell, James (2010) Characterization and expression of the maize β-carbonic anhydrase gene repeat regions. Plant Physiology and Biochemistry, 48 (12). pp. 945-951.

Hebbard, Lionel, and George, Jacob (2010) The chicken or the egg: adipocytes and hepatic insulin resistance. Hepatology, 51 (3). pp. 1076-1079.

Luque, A., Walker, L.R., Pedley, J.C., Pedley, K.C., Hillrichs, K., Simpson, H.V., and Simcock, D.C. (2010) Teladorsagia circumcincta: survival of adults in vitro is enhanced by the presence of a mammalian cell line. Experimental Parasitology, 124 (2). pp. 247-251.

Coates, John M., Gurnell, Mark, and Sarnyai, Zoltan (2010) From molecule to market: steroid hormones and financial risk-taking. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1538). pp. 331-343.

Burnell, Jim N. (2010) Cloning and characterization of Escherichia coli DUF299: a bifunctional ADP-dependent kinase - Pi-dependent pyrophosphorylase from bacteria. BMC Biochemistry, 11 (1). pp. 1-8.

Gordon, Benjamin R., and Leggat, William (2010) Symbiodinium-invertebrate symbioses and the role of metabolomics. Marine Drugs, 8 (10). pp. 2546-2568.

Császár, N.B.M., Seneca, F.O., and van Oppen, M.J.H. (2009) Variation in antioxidant gene expression in the scleractinian coral Acropora millepora under laboratory thermal stress. Marine Ecology Progress Series, 392. pp. 93-102.

Lim, Joseph C., Mickute, Zita, Zaman, Monju, Hopkins, Sarah, Wijesuriya, Hasini, Steckler, Thomas, Moechars, Dieder, Van Leuven, Fred, Sarnyai, Zoltan , Hladky, Stephen B., and Barrand, Margery A. (2009) Decreased expression of multidrug efflux transporters in the brains of GSK-3β transgenic mice. Brain Research, 1276. pp. 1-10.

Beger, Richard D., Hansen, Deborah K. , Schnackenberg, Laura K. , Cross, Brandie M., Fatollahi, Javad J., Lagunero, F. Tracy, Sarnyai, Zoltan, and Boros, Laszlo G. (2009) Single valproic acid treatment inhibits glycogen and RNA ribose turnover while disrupting glucose-derived cholesterol synthesis in liver as revealed by the [U-13C6]-d-glucose tracer in mice. Metabolomics, 5 (3). pp. 336-345.

Reef, Ruth, Dunn, Simon, Levy, Oren, Dove, Sophie, Shemesh, Eli, Brickner, Itzchak, Leggat, William, and Hoegh-Guldberg, Ove (2009) Photoreactivation is the main repair pathway for UV-induced DNA damage in coral planulae. Journal of Experimental Biology, 212. pp. 2760-2766.

Sarnyai, Zoltán, and Boros, László G. (2008) Modeling networks of glycolysis, overall energy metabolism and drug Metabolism under a systems biology approach. Annual Reports in Medicinal Chemistry, 43. pp. 329-349.

James, Anthony P., Barnes, Phillip D., Palmer, T. Norman, and Fournier, Paul A. (2008) Proglycogen and macroglycogen: artifacts of glycogen extraction? Metabolism: clinical and experimental, 57 (4). pp. 535-543.

Caine, Jo, Sankovich, Sonia, Antony, Helma, Waddington, Lynne, Macreadie, Peter, Varghese, Jose, and Macreadie, Ian (2007) Alzheimer's Aβ fused to green fluorescent protein induces growth stress and a heat shock response. FEMS Yeast Research, 7 (8). pp. 1230-1236.

Tetu, Sasha G., Tanz, Sandra K., Vella, Nicole, Burnell, James N., and Ludwig, Martha (2007) The Flaveria bidentis beta-carbonic anhydrase gene family encodes cytosolic and chloroplastic isoforms demonstrating distinct organ-specific expression patterns. Plant Physiology, 144 (3). pp. 1316-1327.

Simcock, D.C., Walker, L.R., Pedley, K.C., Simpson, H.V., and Brown, S. (2007) The glyoxylate cycle in Ostertagia (Teladorsagia) circumcincta. New Zealand Journal of Zoology, 34 (2). pp. 153-154.

Burnell, Jim N., and Chastain, Chris J. (2006) Cloning and expression of maize-leaf pyruvate, Pi dikinase regulatory protein gene. Biochemical and Biophysical Research Communications, 345 (2). pp. 675-680.

Kuhla, Björn , Boeck, Katharina, Lüth, Hans-Joachim, Schmidt, Angela, Weigle, Bernd, Schmitz, Marc, Ogunlade, Vera, Münch, Gerald, and Arendt, Thomas (2006) Age-dependent changes of glyoxalase I expression in human brain. Neurobiology of Aging, 27 (6). pp. 815-822.

Suzuki, Shoichi, Murai, Nobuhiko, Kasaoka, Keisuke, Hiyoshi, Toru, Imaseki, Hidemasa, Burnell, Jim N., and Arai, Masao (2006) Carbon metabolism in transgenic rice plants that express phosphoenolpyruvate carboxylase and/or phosphoenolpyruvate carboxykinase. Plant Science, 170 (5). pp. 1010-1019.

Kuhla, Björn, Lüth, Hans-Joachim, Haferburg, Dietrich, Weick, Michael, Reichenbach, Andreas, Arendt, Thomas, and Münch, Gerald (2006) Pathological effects of glyoxalase I inhibition in SH-SY5Y neuroblastoma cells. Journal of Neuroscience Research, 83 (8). pp. 1591-1600.

Ferreira, Luis D.M.C.-B., Xu, Dan, Palmer, T. Norman, and Fournier, Paul A. (2005) Effect of impaired glucose uptake on postexercise glycogen repletion in skeletal muscles of insulin-treated streptozotocin-diabetic fasted rats. Metabolism: clinical and experimental, 54 (11). pp. 1420-1427.

Otsuki, S., Morshed, S.R.M., Chowdhury, S.A., Takayama, F., Satoh, T., Hashimoto, K., Sugiyama, K., Amano, O., Yasui, T., Yokote, Y., Akahane, K., and Sakagami, H. (2005) Possible link between glycolysis and apoptosis induced by sodium fluoride. Journal of Dental Research, 84 (10). pp. 919-923.

Sharpe, Iain A., Thomas, Linda, Loughnan, Marion, Motin, Leonid, Palant, Elka, Croker, Daniel E., Alewood, Dianne, Chen, Songhai, Graham, Robert M., Alewood, Paul F., Adams, David J., and Lewis, Richard J. (2003) Allosteric alpha 1-adrenoreceptor antagonism by the conopeptide rho-TIA. Journal of Biological Chemistry, 278 (36). pp. 34451-34457.

Hernández-Urzúa, Elizabeth, Mills, Catherine E., White, Gregory P., Contreras-Zentella, Martha L., Escamilla, Edgardo, Vasudevan, Subhash G., Membrillo-Hernández, Jorge, and Poole, Robert K. (2003) Flavohemoglobin Hmp, but not its individual domains, confers protection from respiratory inhibition by nitric oxide in Escherichia coli. Journal of Biological Chemistry, 278 (37). pp. 34975-34982.

Raja, Ghazala, Brau, Lambert, Palmer, T. Norman, and Fournier, Paul A. (2003) Repeated bouts of high-intensity exercise and muscle glycogen sparing in the rat. Journal of Experimental Biology, 206. pp. 2159-2166.

Leggat, William, Marendy, Elessa M., Baillie, Brett, Whitney, Spencer M., Ludwig, Martha, Badger, Murray R., and Yellowlees, David (2002) Dinoflagellate symbioses: strategies and adaptations for the acquisition and fixation of inorganic carbon. Functional Plant Biology, 29 (3). pp. 309-322.

Dobson, Geoffrey P., and Himmelreich, Uwe (2002) Heart design: free ADP scales with absolute mitochondrial and myofibullar volumes from mouse to human. Biochimica et Biophysica Acta, 1553 (3). pp. 261-267.

Hunt, P.W., Watts, R.A., Trevaskis, B., Llewelyn, D.J., Burnell, J., Dennis, E.S., and Peacock, W.J. (2001) Expression and evolution of functionally distinct haemoglobin genes in plants. Plant Molecular Biology, 47 (5). pp. 677-692.

Llewellyn, Lyndon E., and Burnell, James N. (2000) Marine organisms as sources of C4-weed-specific herbicides. Pesticide Outlook, 2. pp. 64-67.

Leggat, W.P., Rees, T.A.V., and Yellowlees, D. (2000) Meeting the photosynthetic demand for inorganic carbon in an alga-invertebrate association: preferential use of CO2 by symbionts in the giant clam Tridacna gigas. Proceedings of the Royal Society of London Series B, Biological Sciences, 267 (1442). pp. 523-529.

Finnegan, Patrick M., Suzuki, Shoichi, Ludwig, Martha, and Burnell, Jim (1995) Isolation and sequence analysis of cDNAs encoding phosphoenolpyruvate carboxykinase from the PCK-type C4 grass Urochloa panicoides. Plant molecular biology, 27 (2). pp. 365-376.

Usami, S., Ohta, S., Komari, T., and Burnell, Jim (1995) Cold stability of pyruvate, orthophosphate dikinase of Flaveria brownii. Plant Molecular Biology, 27 (5). pp. 969-980.

Ludwig, Martha, and Burnell, James N. (1995) Molecular comparison of carbonic anhydrase from Flaveria species demonstrating different photosynthetic pathways. Plant Molecular Biology, 29 (2). pp. 353-365.

Hatch, Marshall D., and Burnell, James N. (1990) Carbonic anhydrase activity in leaves and its role in the first step of C4 photosynthesis. Plant Physiology, 93 (2). pp. 825-828.

Weiner, Hendrik, Burnell, James N., Woodrow, Ian E., Heldt, Hans W., and Hatch, Marshall D. (1988) Metabolite diffusion into bundle sheath cells from C4 plants: relation to C4 photosynthesis and plasmodesmatal function. Plant Physiology, 88 (3). pp. 815-822.

Burnell, J.N., and Hatch, M.D. (1985) Regulation of C4 photosynthesis: purification and properties of the protein catalyzing ADP-mediated inactivation and Pi-mediated activation of pyruvate, Pi dikinase. Archives of Biochemistry and Biophysics, 237 (2). pp. 490-503.

Book Chapter

Antony, Helma, and Macreadie, Ian G. (2011) Dietary copper and the brain. In: Preedy, Victor R., Watson, Ronald Ross, and Martin, Colin R., (eds.) Handbook of Behavior, Food and Nutrition. Springer, New York, US, pp. 2375-2392.

Burnell, James N. (2011) Hurdles to engineering greater photosynthetic yields in crop plants: C4 rice. In: Raghavendra, Agepati S., and Sage, Rowan F., (eds.) C4 Photosynthesis and Related CO2 Concentrating Mechanisms. Advances in Photosynthesis and Respiration, 32 . Springer, The Netherlands, pp. 361-378.

Burnell, Jim N. (2000) Carbonic anhydrases in higher plants: an overview. In: Chegwidden, R.W., Carter, N.D., and Edwards, Y.H., (eds.) The Carbonic Anhydrases: new horizons. Experientia Supplementum, 90 . Birkhäuser, Basel, Switzerland, pp. 501-518.

Ashton, A.R, Burnell, J.N., Furbank, R.T., Jenkins, C.L.D., and Hatch, M.D. (1990) The enzymes in C4 photosynthesis. In: Lea, P.J., and Harborne, J.B., (eds.) Enzymes of Primary Metabolism. Methods in Plant Biochemistry, 3 . Academic Press, London, UK, pp. 39-72.

Conference Item

Vangaveti, V., and Kennedy, L. (2009) Regulation of stearoyl-coa desaturase by hydroxyoctadecadienoic acids. In: Abstracts from the Australian Society for Medical Research Queensland Postgraduate Student Conference. From: Australian Society for Medical Research Queensland Postgraduate Student Conference, 26 May 2009, Brisbane, QLD, Australia.

Thesis

Cantin, Neal (2008) Chronic effects of herbicide exposure on photosynthesis, symbiosis and reproduction of reef building corals. PhD thesis, James Cook University.

de Nys, Rocky (1991) Natural products chemistry and chemical ecology of tropical marine algae. PhD thesis, James Cook University.