Article

Villacorta Rath, Cecilia, Adekunle, Adeshina I., Edmunds, Richard C., Strugnell, Jan M., Schwarzkopf, Lin, and Burrows, Damien (2020) Can environmental DNA be used to detect first arrivals of the cane toad, Rhinella marina, into novel locations? Environmental DNA, 2 (4). pp. 635-646.

Phiri, Bernard J., Pita, Anthony B., Hayman, David T.S., Biggs, Patrick J., Davis, Meredith T., Fayaz, Ahmed, Canning, Adam D., French, Nigel P., and Death, Russell G. (2020) Does land use affect pathogen presence in New Zealand drinking water supplies? Water Research, 185. 116229.

Huerlimann, R., Cooper, M.K., Edmunds, R.C., Villacorta-Rath, C., Le Port, A., Robson, H.L.A., Strugnell, J.M., Burrows, D., and Jerry, D.R. (2020) Enhancing tropical conservation and ecology research with aquatic environmental DNA methods: an introduction for non-environmental DNA specialists. Animal Conservation, 23 (6). pp. 632-645.

Wilson, Julian R., Saunders, Richard J., and Hutson, Kate S. (2019) Parasites of the invasive tilapia Oreochromis mossambicus: evidence for co-introduction. Aquatic Invasions, 14 (2). pp. 332-349.

Sapsford, Sarah J., Alford, Ross A., and Schwarzkopf, Lin (2018) Disentangling causes of seasonal infection prevalence patterns: tropical tadpoles and chytridiomycosis as a model system. Diseases of Aquatic Organisms, 130 (2). pp. 83-93.

Kelly, E., Martin, P.A.J., Gibson-Kueh, S., Morgan, D.L., Ebner, B.C., Donaldson, J., Buller, N., Crook, D.A., Brooks, S., Davis, Aaron, Hammer, M.P., Foyle, L., Hair, S., and Lymbery, A.J. (2018) First detection of Edwardsiella ictaluri (Proteobacteria: Enterobacteriaceae) in wild Australian catfish. Journal of Fish Diseases, 41 (2). pp. 199-208.

Stilwell, Natalie K., Whittington, Richard J., Hick, Paul M., Becker, Joy A., Ariel, Ellen, van Beurden, Steven, Vendramin, Niccolo, Olesen, Niels J., and Waltzek, Thomas B. (2018) Partial validation of a TaqMan real-time quantitative PCR for the detection of ranaviruses. Diseases of Aquatic Organisms, 128 (2). pp. 105-116.

Wirth, Wytamma, Schwarzkopf, Lin, Skerratt, Lee F., and Ariel, Ellen (2018) Ranaviruses and reptiles. PeerJ, 6. 6083.

Maclaine, Alicia, Mashkour, Narges, Scott, Jennifer, and Ariel, Ellen (2018) Susceptibility of eastern water dragons Intellagama lesueurii lesueurii to Bohle iridovirus. Diseases of Aquatic Organisms, 127. pp. 97-105.

Reynolds, Chevonne, Cumming, Graeme S., Vilà, Montserrat, and Green, Andy J. (2017) Birds as key vectors for the dispersal of some alien species: further thoughts. Diversity and Distributions, 23 (5). pp. 577-580.

Beatty, Stephen J., Allen, Mark G., Whitty, Jeff M., Lymbery, Alan J., Keleher, James J., Tweedley, James R., Ebner, Brendan C., and Morgan, David L. (2017) First evidence of spawning migration by goldfish (Carassius auratus); implications for control of a globally invasive species. Ecology of Freshwater Fish, 26. pp. 444-455.

Price, Stephen J., Ariel, Ellen, Maclaine, Alicia, Rosa, Goncalo M., Gray, Matthew J., Brunner, Jesse F., and Garner, Trenton W.J. (2017) From fish to frogs and beyond: impact and host range of emergent ranaviruses. Virology, 511. pp. 272-279.

Borzée, Amaël, Kosch, Tiffany A., Kim, Miyeon, and Jang, Yikweon (2017) Introduced bullfrogs are associated with increased Batrachochytrium dendrobatidis prevalence and reduced occurrence of Korean treefrogs. PLoS ONE, 12. e0177860.

Ariel, E., Elliott, E., Meddings, J.I., Miller, J., Santos, M.B., and Owens, L. (2017) Serological survey of Australian native reptiles for exposure to ranavirus. Diseases of Aquatic Organisms, 126 (3). pp. 173-183.

Ebner, Brendan C., Donaldson, James, Allen, Gerald E., and Keith, Philippe (2017) Visual census, photographic records and the trial of a video network provide first evidence of the elusive Sicyopterus cynocephalus in Australia. Cybium, 41 (2). pp. 117-125.

Holopainen, Riikka, Subramaniam, Kuttichantran, Steckler, Natalie K., Claytor, Sieara C., Ariel, Ellen, and Waltzek, Thomas B. (2016) Genomic sequence of a ranavirus isolated from pike-perch Sander lucioperca. Genome Announcements, 7 (1). e01295-16.

Subramaniam, Kuttichantran, Toffan, Anna, Capellozza, Elisabetta, Steckler, Natalie K., Olesen, Niels J., Ariel, Ellen, and Waltzek, Thomas B. (2016) Genomic sequence of a ranavirus isolated from short-finned eel (Anguilla australis). Genome Announcements, 4 (4). e00843-16. pp. 1-2.

Coccia, Cristina, Fry, Brian, Ramírez, Francisco, Boyero, Luz, Bunn, Stuart E., Diz-Salgado, Carmen, Walton, Mark, Le Vay, Lewis, and Green, Andy J. (2016) Niche partitioning between invasive and native corixids (Hemiptera, Corixidae) in south-west Spain. Aquatic Sciences, 78 (4). pp. 779-791.

Kelly, E., Gibson-Kueh, S., Ebner, B.C., Donaldson, J.A., Yang, R., Buller, N., Hair, S., Morgan, D.L., and Lymbery, A.J. (2016) Observations on the health of Tandanus tropicanus (Teleostei: Plotosidae) from an Australian river system. Australian Zoologist, 38 (1). pp. 83-89.

Stockwell, Michelle P., Bower, Deborah S., Clulow, John, and Mahony, Michael J. (2016) The role of non-declining amphibian species as alternative hosts for Batrachochytrium dendrobatidis in an amphibian community. Wildlife Research, 43 (4). pp. 341-347.

Brannelly, Laura A., McMahon, Taegan A., Hinton, Mitchell, Lenger, Daniel, and Richards-zawacki, Corinne L. (2015) Batrachochytrium dendrobatidis in natural and farmed Louisiana crayfish populations: prevalence and implications. Diseases of Aquatic Organisms, 112 (3). pp. 229-235.

Forzán, María J., Jones, Kathleen M., Vanderstichel, Raphaël V., Wood, John, Kibenge, Frederick S.B., Kuiken, Thijs, Wirth, Wytamma, Ariel, Ellen, and Daoust, Pierre-Yves (2015) Clinical signs, pathology and dose-dependent survival of adult wood frogs, Rana sylvatica, inoculated orally with frog virus 3 Ranavirus sp., Iridoviridae. Journal of General Virology, 96 (5). pp. 1138-1149.

Ariel, E., Wirth, W., Burgess, G., Scott, J., and Owens, L. (2015) Pathogenicity in six Australian reptile species following experimental inoculation with Bohle iridovirus. Diseases of Aquatic Organisms, 115 (3). pp. 203-212.

Ovenden, J.R., Macbeth, G.M., Pope, L., Thuesen, P., Street, R., and Broderick, D. (2015) Translocation between freshwater catchments has facilitated the spread of tilapia in eastern Australia. Biological Invasions, 17 (2). pp. 637-650.

Daskin, Joshua H., Bell, Sara C., Schwarzkopf, Lin, and Alford, Ross A. (2014) Cool temperatures reduce antifungal activity of symbiotic bacteria of threatened amphibians: implications for disease management and patterns of decline. PLoS ONE, 9 (6). e100378. pp. 1-9.

Bell, Sara C., Alford, Ross A., Garland, Stephen, Padilla, Gabriel, and Thomas, Annette D. (2013) Screening bacterial metabolites for inhibitory effects against Batrachochytrium dendrobatidis using a spectrophotometric assay. Diseases of Aquatic Organisms, 103 (1). pp. 77-85.

Bletz, Molly C., Louden, Andrew H., Becker, Matthew H., Bell, Sara C., Woodhams, Douglas C., Minbiole, Kevin P.C., and Harris, Reid N. (2013) Mitigating amphibian chytridiomycosis with bioaugmentation: characteristics of effective probiotics and strategies for their selection and use. Ecology Letters, 16 (6). pp. 807-820.

Voyles, Jamie, Johnson, Leah R., Briggs, Cheryl J., Cashins, Scott D., Alford, Ross A., Berger, Lee, Skerratt, Lee F., Speare, Rick , and Rosenblum, Erica Bree (2012) Temperature alters reproductive life history patterns in Batrachochytrium dendrobatidis, a lethal pathogen associated with the global loss of amphibians. Ecology and Evolution, 2 (9). pp. 2241-2249.

Webb, Rebecca, Philips, Annie, Speare, Rick, Connolly, Joanne, and Berger, Lee (2012) Controlling wildlife fungal disease spread: in vitro efficacy of disinfectants against Batrachochytrium dendrobatidis and Mucor amphibiorum. Diseases of Aquatic Organisms, 99 (2). pp. 119-125.

Morgan, David L., Allen, Gerald R., Pusey, Bradley J., and Burrows, Damien W. (2011) A review of the freshwater fishes of the Kimberley region of Western Australia. Zootaxa, 2816. pp. 1-64.

Haynes, Gwilym D., Gongora, Jaime, Nicholas, Frank W., and Zenger, Kyall R. (2009) Rapid identification of maternal lineages in common carp (Cyprinus carpio L.) using real-time PCR and high resolution melt-curve analysis. Aquaculture, 287 (1-2). pp. 59-66.

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Van Sluys, M., Kriger, K.M., Phillott, A.D., Campbell, R., Skerratt, L.F., and Hero, J.-M. (2008) Storage of samples at high temperatures reduces the amount of amphibian chytrid fungus Batrachochytrium dendrobatidis DNA detectable by PCR assay. Diseases of Aquatic Organisms, 81 (2). pp. 93-97.

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Book Chapter

Doanh, Pham Ngoc, Maruyama, Haruhiko, Blair, David, and Nawa, Yukifumi (2018) Paragonimus. In: Liu, Dongyou, (ed.) Handbook of Foodborne Diseases. Food Microbiology . CRC Press, Boca Raton, London, New York, pp. 813-822.

Gray , Matthew J., Brunner, Jesse L., Earl, Julia E., and Ariel, Ellen (2015) Design and analysis of ranavirus studies: surveillance and assessing risk. In: Gray, Matthew J., and Chinchar, V. Gregory, (eds.) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Heidelberg, Germany, pp. 209-240.

Pusey, Brad, Kennard, Mark, Burrows, Damien, Perna, Colton, Kyne, Peter, Cook, Ben, and Hughes, Jane (2011) Freshwater fish. In: Pusey, B.J., (ed.) Aquatic Biodiversity in Northern Australia: Patterns, Threats and Future. CDU Press, Darwin, NT, pp. 71-92.

Pusey, Brad, Warfe, Danielle, Townsend, Simon, Douglas, Michael, Burrows, Damien, Kennard, Mark, and Close, Paul (2011) Condition, impacts and threats to aquatic biodiversity. In: Pusey, B.J., (ed.) Aquatic Biodiversity in Northern Australia: Patterns, Threats and Future. CDU Press, Darwin, NT, pp. 151-172.

Douglas, Michael, Jackson, Sue, Setterfield, Samantha, Pusey, Brad, Davies, Peter, Kennard, Mark, Burrows, Damien, and Bunn, Stuart (2011) Northern futures: threats and opportunities for freshwater ecosystems. In: Pusey, B.J., (ed.) Aquatic Biodiversity in Northern Australia: Patterns, Threats and Future. CDU Press, Darwin, NT, pp. 203-220.

Report

Doupè, Robert G., Schaffer, Jason, and Knott, Matthew J. (2008) An Example of Freshwater Turtle Habitat Destruction by Foraging Feral Pigs in Tropical North-Eastern Australia. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Thesis

Maclaine, Alicia (2019) Characterisation of ranaviral infection and its management in Australian lizards. PhD thesis, James Cook University.

Januchowski-Hartley, Stephanie Renee (2011) Advancing systematic conservation planning for freshwater ecosystems. PhD thesis, James Cook University.

Kenyon, Nicole (2008) Variable susceptibility to an emerging infectious disease, chytridiomycosis, in anurans. PhD thesis, James Cook University.