Adamu, Andrew M., Firth, Cadhla, Gummow, Bruce, Hickson, Roslyn I., Hoskins, Andrew J., and Horwood, Paul F. (2024) Feral pigs as a reservoir for zoonotic and transboundary diseases in the Western Pacific Region. Western Pacific Surveillance and Response, 15 (1).

Lopes, Camila, Firth, Cadhla, and Laurance, Susan (2024) Occupancy of urban roosts by spectacled flying-foxes (Pteropus conspicillatus) is not affected by diurnal microclimate. Austral Ecology, 49. e13487.

Sievers, Benjamin L., Siegers, Jurre Y., Cadenes, Jimmy M., Hyder, Sudipta, Sparaciari, Frida E., Claes, Filip, Firth, Cadhla, Horwood, Paul F., and Karlsson, Erik A. (2024) "Smart markets": harnessing the potential of new technologies for endemic and emerging infectious disease surveillance in traditional food markets. Journal of Virology, 98 (2). e01683.

Steinig, Eike, Duchene, Sebastian, Aglua, Izzard, Greenhill, Andrew, Ford, Rebecca, Yoannes, Mition, Jaworski, Jan, Drekore, Jimmy, Urakoko, Bohu, Poka, Harry, Wurr, Clive, Ebos, Eri, Nangen, David, Manning, Laurens, Laman, Moses, Firth, Cadhla, Smith, Simon, Pomat, William, Tong, Steven Y.C., Coin, Lachlan, McBryde, Emma, and Horwood, Paul (2022) Phylodynamic Inference of Bacterial Outbreak Parameters Using Nanopore Sequencing. Molecular Biology and Evolution, 39 (3). msac040.

Steinig, Eike, Aglua, Izzard, Duchene, Sebastian, Meehan, Michael T., Yoannes, Mition, Firth, Cadhla, Jaworski, Jan, Drekore, Jimmy, Urakoko, Bohu, Poka, Harry, Wurr, Clive, Ebos, Eri, Nangen, David, Muller, Elke, Mulvey, Peter, Jackson, Charlene, Blomfeldt, Anita, Vangstein Aamot, Hege, Laman, Moses, Manning, Laurens, Earls, Megan, Coleman, David C., Greenhill, Andrew, Ford, Rebecca, Stegger, Marc, Ali Syed, Muhammad, Jamil, Bushra, Monecke, Stefan, Ehricht, Ralf, Smith, Simon, Pomat, William, Horwood, Paul, Tong, Steven Y.C., and McBryde, Emma (2022) Phylodynamic signatures in the emergence of community-associated MRSA. Proceedings of the National Academy of Sciences of the United States of America, 119 (45). e2204993119.

Blasdell, Kim R., Morand, Serge, Laurance, Susan G.W., Doggett, Stephen L., Hahs, Amy, Trinh, Kelly, Perera, David, and Firth, Cadhla (2022) Rats and the city: Implications of urbanization on zoonotic disease risk in Southeast Asia. Proceedings of the National Academy of Sciences of the United States of America, 119 (39). e2112341119.

Saggiomo, Silvia L., Firth, Cadhla, Wilson, David T., Seymour, Jamie, Miles, John J., and Wong, Yide (2021) The geographic distribution, venom components, pathology and treatments of stonefish (Synanceia spp.) venom. Marine Drugs, 19 (6). 302.

Blasdell, Kim R., Morand, Serge, Perera, David, and Firth, Cadhla (2019) Association of rodent-borne Leptospira spp. with urban environments in Malaysian Borneo. PLoS Neglected Tropical Diseases, 13 (2). e0007141.

Williams, Simon H., Che, Xiaoyu, Oleynik, Alexandra, Garcia, Joel A., Muller, Dorothy, Zabka, Tanja, Firth, Cadhla, Corrigan, Robert M., Briese, Thomas, Jain, Komal, and Lipkin, W. Ian (2019) Discovery of two highly divergent negative-sense RNA viruses associated with the parasitic nematode, Capillaria hepatica, in wild Mus musculus from New York City. Journal of General Virology, 100 (10). pp. 1350-1362.

Wang, Jidong, Firth, Cadhla, Amos-Ritchie, Rachel, Davis, Steven S., Yin, Hong, Holmes, Edward C., Blasdell, Kim R., and Walker, Peter J. (2019) Evolutionary history of Simbu serogroup orthobunyaviruses in the Australian episystem. Virology, 535. pp. 32-44.

Blasdell, Kim R., Perera, David, and Firth, Cadhla (2019) High prevalence of rodent-borne Bartonella spp. in urbanizing environments in Sarawak, Malaysian Borneo. American Journal of Tropical Medicine and Hygiene, 100 (3). pp. 506-509.

Firth, Cadhla, Blasdell, Kim R., Amos-Ritchie, Rachel, Sendow, Indrawati, Agnihotri, Kalpana, Boyle, David B., Daniels, Peter, Kirkland, Peter, and Walker, Peter J. (2017) Genomic analysis of bluetongue virus episystems in Australia and Indonesia. Veterinary Research, 48. 82.

Peterson, Anna C., Ghersi, Bruno M., Alda, Fernando, Firth, Cadhla, Frye, Matthew J., Bai, Ying, Osikowicz, Lynn M., Riegel, Claudia, Lipkin, W. Ian, Kosoy, Michael Y., and Blum, Michael J. (2017) Rodent-borne Bartonella infection varies according to host species within and among cities. EcoHealth, 14 (4). pp. 771-782.

Huang, Bixing, Firth, Cadhla, Watterson, Daniel, Allcock, Richard, Colmant, Agathe M.G., Hobson-Peters, Jody, Kirkland, Peter, Hewitson, Glen, Mcmahon, Jamie, Hall-Mendelin, Sonja, van den Hurk, Andrew F., and Warrilow, David (2016) Genetic characterization of archived bunyaviruses and their potential for emergence in Australia. Emerging Infectious Diseases, 22 (5). pp. 833-840.

Walker, Peter J., Firth, Cadhla, Widen, Steven G., Blasdell, Kim R., Guzman, Hilda, Wood, Thomas G., Paradkar, Prasad N., Holmes, Edward C., Tesh, Robert B., and Vasilakis, Nikos (2015) Evolution of genome size and complexity in the Rhabdoviridae. PLoS Pathogens, 11 (2). e1004664.

Walker, Peter J., Widen, Stephen G., Firth, Cadhla, Blasdell, Kim R., Wood, Thomas G., Travassos da Rosa, Amelia P.A., Guzman, Hilda, Tesh, Robert B., and Vasilakis, Nikos (2015) Genomic characterization of Yogue, Kasokero, Issyk-Kul, Keterah, Gossas, and Thiafora Viruses: Nairoviruses naturally infecting bats, shrews, and ticks. American Journal of Tropical Medicine and Hygiene, 93 (5). pp. 1041-1051.

Blasdell, Kim R., Widen, Steven G., Wood, Thomas G., Holmes, Edward C., Vasilakis, Nikos, Tesh, Robert B., Walker, Peter J., Guzman, Hilda, and Firth, Cadhla (2015) Ledantevirus: a proposed new genus in the Rhabdoviridae has a strong ecological association with bats. American Journal of Tropical Medicine and Hygiene, 92. pp. 405-410.

Firth, Cadhla, Bhat, Meera, Firth, Matthew A., Williams, Simon H., Frye, Matthew J., Simmonds, Peter, Conte, Juliette M., Ng, James, Garcia, Joel, Bhuva, Nishit P., Lee, Bohyun, Che, Xiaoyu, Quan, Phenix-Lan, and Lipkin, W. Ian (2014) Detection of zoonotic pathogens and characterization of novel viruses carried by commensal Rattus norvegicus in New York City. mBio, 5 (5). e01933-14.

Blasdell, Kim R., Widen, Steven G., Diviney, Sinéad M., Firth, Cadhla, Wood, Thomas G., Guzman, Hilda, Holmes, Edward C., Tesh, Robert B., Vasilakis, Nikos, and Walker, Peter J. (2014) Koolpinyah and Yata viruses: two newly recognised ephemeroviruses from tropical regions of Australia and Africa. Veterinary Microbiology, 174 (3-4). pp. 547-553.

Vasilakis, Nikos, Guzman, Hilda, Firth, Cadhla, Forrester, Naomi L., Widen, Steven G., Wood, Thomas G., Rossi, Shannan L., Ghedin, Elodie, Popov, Vsevolov, Blasdell, Kim R., Walker, Peter J., and Tesh, Robert B. (2014) Mesoniviruses are mosquito-specific viruses with extensive geographic distribution and host range. Virology Journal, 11. 97.

Quan, Phenix-Lan, Firth, Cadhla, Conte, Juliette M., Williams, Simon H., Zambrana-Torrelio, Carlos M., Anthony, Simon J., Ellison, James A., Gilbert, Amy T., Kuzmin, Ivan V., Niezgoda, Michael, Osinubi, Modupe O.V., Recuenco, Sergio, Markotter, Wanda, Breiman, Robert F., Kalemba, Lems, Malekani, Jean, Lindblade, Kim A., Rostal, Melinda K., Ojeda-Flores, Rafael, Suzan, Gerardo, Davis, Lora B., Blau, Dianna M., Ogunkoya, Albert B., Alvarez Castillo, Danilo A., Moran, David, Ngam, Sali, Akaibe, Dudu, Agwanda, Bernard, Briese, Thomas, Epstein, Jonathan H., Daszak, Peter, Rupprecht, Charles E., Holmes, Edward C., and Lipkin, W. Ian (2013) Bats are a major natural reservoir for hepaciviruses and pegiviruses. Proceedings of the National Academy of Sciences of the United States of America, 110 (20). pp. 8194-8199.

Nikolay, Birgit, Dupressoir, Anne, Firth, Cadhla, Faye, Ousmane, Boye, Cheik S., Diallo, Mawlouth, and Sall, Amadou A. (2013) Comparative full length genome sequence analysis of usutu virus isolates from Africa. Virology Journal, 10. 217.

Firth, Cadhla, and Lipkin, W. Ian (2013) The Genomics of Emerging Pathogens. Annual Review of Genomics and Human Genetics, 14. pp. 281-300.

Lipkin, Walter Ian, and Firth, Cadhla (2013) Viral surveillance and discovery. Current Opinion in Virology, 3 (2). pp. 199-204.

Firth, Cadhla, Tokarz, Rafal, Simith, Darlene B., Nunes, Marcio R.T., Bhat, Meera, Rosa, Elizabeth S.T., Medeiros, Daniele B.A., Palacios, Gustavo, Vasconcelos, Pedro F.C., and Lipkin, W. Ian (2012) Diversity and Distribution of Hantaviruses in South America. Journal of Virology, 86 (24). pp. 13756-13766.

Tokarz, Rafal, Firth, Cadhla, Madhi, Shabir A., Howie, Stephen R.C., Wu, Winfred, Sall, Amadou Alpha, Haq, Sadef, Briese, Thomas, and Lipkin, W. Ian (2012) Worldwide emergence of multiple clades of enterovirus 68. Journal of General Virology, 93 (9). pp. 1952-1958.

Kapoor, Amit, Simmonds, Peter, Gerold, Gisa, Qaisar, Natasha, Jain, Komal, Henriquez, Jose A., Firth, Cadhla, Hirschberg, David L., Rice, Charles M., Shields, Shelly, and Lipkin, W. Ian (2011) Characterization of a canine homolog of hepatitis C virus. Proceedings of the National Academy of Sciences of the United States of America, 108 (28). pp. 11608-11613.

Quan, Phenix-Lan, Wagner, Thor A., Briese, Thomas, Torgerson, Troy R., Hornig, Mady, Tashmukhamedova, Alla, Firth, Cadhla, Palacios, Gustavo, Baisre-De-Leon, Ada, Paddock, Christopher D., Hutchison, Stephen K., Egholm, Michael, Zaki, Sherif R., Goldman, James E., Ochs, Hans D., and Lipkin, W. Ian (2010) Astrovirus Encephalitis in Boy with X-linked Agammaglobulinemia. Emerging Infectious Diseases, 16 (6). pp. 918-925.

Quan, Phenix-Lan, Firth, Cadhla, Street, Craig, Henriquez, Jose A., Petrosov, Alexandra, Tashmukhamedova, Alla, Hutchison, Stephen K., Egholm, Michael, Osinubi, Modupe O.V., Niezgoda, Michael, Ogunkoya, Albert B., Briese, Thomas, Rupprecht, Charles E., and Lipkin, W. Ian (2010) Identification of a Severe Acute Respiratory Syndrome Coronavirus-Like Virus in a Leaf-Nosed Bat in Nigeria. mBio, 1 (4). e00208-e00210.

Pagán, Israel, Firth, Cadhla, and Holmes, Edward C. (2010) Phylogenetic Analysis Reveals Rapid Evolutionary Dynamics in the Plant RNA Virus Genus Tobamovirus. Journal of Molecular Evolution, 71. pp. 298-307.

Firth, Cadhla, Kitchen, Andrew, Shapiro, Beth, Suchard, Marc A., Holmes, Edward C., and Rambaut, Andrew (2010) Using Time-Structured Data to Estimate Evolutionary Rates of Double-Stranded DNA Viruses. Molecular Biology and Evolution, 27 (9). pp. 2038-2051.

Sall, Amadou A., Faye, Ousmane, Diallo, Mawlouth, Firth, Cadhla, Kitchen, Andrew, and Holmes, Edward C. (2010) Yellow Fever Virus Exhibits Slower Evolutionary Dynamics than Dengue Virus. Journal of Virology, 84 (2). pp. 765-772.

Firth, Cadhla, Charleston, Michael A., Duffy, Siobain, Shapiro, Beth, and Holmes, Edward C. (2009) Insights into the Evolutionary History of an Emerging Livestock Pathogen: Porcine Circovirus 2. Journal of Virology, 83 (24). pp. 12813-12821.