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Connolly, Sean R., Keith, Sally A., Colwell, Robert K., and Rahbek, Carsten (2017) Process, mechanism, and modeling in macroecology. Trends in Ecology & Evolution, 32 (11). pp. 835-844.

von Schiller, Daniel, Acuna, Vicenc, Aristi, Ibon, Arroita, Maite, Basaguren, Ana, Bellin, Alberto, Boyero, Luz, Butturini, Andrea, Ginebreda, Antoni, Kalogianni, Eleni, Larranaga, Aitor, Majone, Bruno, Martinez, Aingeru, Monroy, Silvia, Munoz, Isabel, Paunovic, Momir, Pereda, Olatz, Petrovic, Mira, Pozo, Jesus, Rodriguez-Mozaz, Sara, Rivas, Daniel, Sabater, Sergi, Sabater, Francesc, Skoulikidis, Nikolaos, Solagaistua, Libe, Vardakas, Leonidas, and Elosegi, Arturo (2017) River ecosystem processes: a synthesis of approaches, criteria of use and sensitivity to environmental stressors. Science of the Total Environment, 596. pp. 465-480.

Fyllas, Nikolaos, Bentley, Lisa Patrick, Shenkin, Alexander, Asner, Gregory P., Atkin, Owen K., Díaz, Sandra, Enquist, Brian J., Farfan-Rios, William, Gloor, Emanuel, Guerrieri, Rossella, Huaraca Huasco, Walter, Ishida, Yoko, Martin, Roberta E., Meir, Patrick, Phillips, Oliver, Salinas, Norma, Silman, Miles, Weerasinghe, Lasantha, Zaragoza-Castells, Joana, and Malhi, Yadvinder (2017) Solar radiation and functional traits explain the decline of forest primary productivity along a tropical elevation gradient. Ecology Letters, 20 (6). pp. 730-740.

Wegscheidl, Carla J., Sheaves, Marcus, McLeod, Ian M., Hedge, Paul T., Gillies, Chris L., and Creighton, Colin (2017) Sustainable management of Australia's coastal seascapes: a case for collecting and communicating quantitative evidence to inform decision-making. Wetlands Ecology and Management, 25 (1). pp. 3-22.

O'Brien, Eleanor K., Higgie, Megan, Reynolds, Alan, Hoffmann, Ary A., and Bridle, Jon R. (2017) Testing for local adaptation and evolutionary potential along altitudinal gradients in rainforest Drosophila: beyond laboratory estimates. Global Change Biology, 23 (5). pp. 1847-1860.

Canning, A.D., and Death, R.G. (2017) Trophic cascade direction and flow determine network flow stability. Ecological Modelling, 355. pp. 18-23.

Schmidt, Katrin, Blanchette, Melanie L., Pearson, Richard G., Alford, Ross A., and Davis, Aaron M. (2017) Trophic roles of tadpoles in tropical Australian streams. Freshwater Biology, 62 (11). pp. 1929-1941.

Canning, A.D., Death, R.G., and Gardner, E.M. (2017) The effect of forest canopy and flood disturbance on New Zealand stream food web structure and robustness. Austral Ecology, 43 (3). pp. 352-358.

Duke, Norman C. (2016) Oil spill impacts on mangroves: recommendations for operational planning and action based on a global review. Marine Pollution Bulletin, 109 (2). pp. 700-715.

Collier, C.J., Adams, M.P., Langlois, L., Waycott, M., O'Brien, K.R., Maxwell, P.S., and McKenzie, L. (2016) Thresholds for morphological response to light reduction for four tropical seagrass species. Ecological Indicators, 67. pp. 358-366.

Wen, Colin K.C., Bonin, Mary C., Harrison, Hugo B., Williamson, David H., and Jones, Geoffrey (2016) Dietary shift in juvenile coral trout (Plectropomus maculatus) following coral reef degradation from a flood plume disturbance. Coral Reefs, 35 (2). pp. 451-455.

De Kauwe, Martin G. , Yan-Shih, Lin, Wright, Ian J., Medlyn, Belinda E., Crous, Kristine Y. , Ellsworth, David S., Maire, Vincent , Prentice, I. Colin, Atkin, Owen K., Rogers, Alistair, Niinemets, Ulo, Serbin, Shawn P. , Meir, Patrick, Uddling, Johan, Togashi, Henrique F., Tarvainen, Lasse, Weerasinghe, Lasantha K., Evans, Bradley J., Ishida, F. Yoko, and Domingues, Thomas F. (2016) A test of the 'one-point method' for estimating maximum carboxylation capacity from field-measured, light-saturated photosynthesis. New Phytologist, 210 (3). pp. 1130-1144.

Goodrick, I., Connor, S., Bird, M.I., and Nelson, P.N. (2016) Emission of CO₂ from tropical riparian forest soil is controlled by soil temperature, soil water content and depth to water table. Soil Research, 54 (3). pp. 311-320.

Lamb, Joleah B., Wenger, Amelia S., Devlin, Michelle J., Ceccarelli, Daniela M., Williamson, David H., and Willis, Bette L. (2016) Reserves as tools for alleviating impacts of marine disease. Philosophical Transactions of the Royal Society B: Biological Sciences, 371 (1689). pp. 1-11.

O'Brien, Dominique, Lewis, Stephen, Davis, Aaron, Gallen, Christie, Smith, Rachael, Turner, Ryan, Warne, Michael, Turner, Scott, Caswell, Stewart, Mueller, Jochen F., and Brodie, Jon (2016) Spatial and temporal variability in pesticide exposure downstream of a heavily irrigated cropping area: application of different monitoring techniques. Journal of Agricultural and Food Chemistry, 64 (20). 5b04710. pp. 3975-3989.

Wenger, Amelia S., Williamson, David H., da Silva, Eduardo T., Ceccarelli, Daniela M., Browne, Nicola, Petus, Caroline, and Devlin, Michelle J. (2016) Effects of reduced water quality on coral reefs in and out of no-take marine reserves. Conservation Biology, 30 (1). pp. 142-153.

Udyawer, V., Simpfendorfer, C.A., Read, M., Hamann, M., and Heupel, M.R. (2016) Exploring habitat selection in sea snakes using passive acoustic monitoring and Bayesian hierarchical models. Marine Ecology Progress Series, 546. pp. 249-262.

Sheaves, Marcus, Baker, Ronnie, Abrantes, Kátya G., and Connolly, Rod M. (2016) Fish biomass in tropical estuaries: substantial variation in food web structure, sources of nutrition and ecosystem-supporting processes. Estuaries and Coasts, 40 (2). pp. 580-593.

Benham, Claudia F., Beavis, Sara G., Hendry, Rebecca A., and Jackson, Emma L. (2016) Growth effects of shading and sedimentation in two tropical seagrass species: implications for port management and impact assessment. Marine Pollution Bulletin, 109 (1). pp. 461-470.

Magris, Rafael A., Treml, Eric A., Pressey, Robert L., and Weeks, Rebecca (2016) Integrating multiple species connectivity and habitat quality into conservation planning for coral reefs. Ecography, 39 (7). pp. 649-664.

Rodríguez-Romero, Araceli, Jarrold, Michael D., Massamba-N'Siala, Gloria, Spicer, John I., and Calosi, Piero (2016) Multi-generational responses of a marine polychaete to a rapid change in seawater pCO(2). Evolutionary Applications, 9 (9). pp. 1082-1095.

Coccia, Cristina, Vanschoenwinkel, Bram, Brendonck, Luc, Boyero, Luz, and Green, Andy J. (2016) Newly created ponds complement natural waterbodies for restoration of macroinvertebrate assemblages. Freshwater Biology, 61 (10). pp. 1640-1654.

Davis, Aaron M., and Pradolin, Jordan (2016) Precision herbicide application technologies to decrease herbicide losses in furrow irrigation outflows in a northeastern Australian cropping system. Journal of Agricultural and Food Chemistry, 64 (20). pp. 4021-4028.

Clements, Hayley S., Cumming, Graeme S., and Kerley, Graham I.H. (2016) Predators on private land: broad-scale socioeconomic interactions influence large predator management. Ecology and Society, 21 (2). 45. pp. 1-9.

Moore, Christine, Grewar, John, and Cumming, Graeme S. (2016) Quantifying network resilience: comparison before and after a major perturbation shows strengths and limitations of network metrics. Journal of Applied Ecology, 53. pp. 636-645.

Grech, Alana, Wolter, Jolan, Coles, Rob, McKenzie, Len, Rasheed, Michael, Thomas, Christopher, Waycott, Michelle, and Hanert, Emmanuel (2016) Spatial patterns of seagrass dispersal and settlement. Diversity and Distributions, 22 (11). pp. 1150-1162.

Morgan, Kyle M., Perry, Chris T., Smithers, Scott G., Johnson, Jamie A., and Gulliver, Pauline (2016) Transitions in coral reef accretion rates linked to intrinsic ecological shifts on turbid-zone nearshore reefs. Geology, 44 (12). pp. 995-998.

De Vos, Alta, Cumming, Graeme S., Moore, Christine A., Maciejewski, Kristine, and Duckworth, Gregory (2016) The relevance of spatial variation in ecotourism attributes for the economic sustainability of protected areas. Ecosphere, 7 (2). e01207.

Mazumder, Debashish, Iles, Jordan, Kelleway, Jeff, Kobayashi, Tsuyoshi, Knowles, Lisa, Saintilan, Neil, and Hollins, Suzanne (2010) Effect of acidification on elemental and isotopic compositions of sediment organic matter and macro‐invertebrate muscle tissues in food web research. Rapid Communications in Mass Spectrometry, 24 (20). pp. 2938-2942.

Book Chapter

Whitehouse, Hilary (2022) The Extinction Crisis. In: Sims, Kearrin, Banks, Nicola, Engel, Susan, Hodge, Paul, Makuwira, Jonathan, Nakamura, Naohiro, Rigg, Jonathan, Salamanca, Albert, and Yeophantong, Pichamon, (eds.) The Routledge Handbook of Global Development. Routledge, Abingdon, UK, pp. 221-232.

Pratchett, Morgan, Bridge, Thomas, Brodie, Jon, Cameron, Darren, Day, Jonathan, Emslie, Mike, Grech, Alana, Hamann, Mark, Heron, Scott, Hoey, Andrew, Hoogenboom, Mia, Lough, Janice, Morrison, Tiffany, Osborne, Kate, Read, Mark, Schauble, Chloe, Smithers, Scott, Sweatman, Hugh, and Waterhouse, Jane (2019) Australia's Great Barrier Reef. In: Sheppard, Charles, (ed.) World Seas: an environmental evaluation. Elsevier, London, UK, pp. 333-362.

Conference Item

Napier, Thomas, Ahn, Euijoon, Allen-Ankins, Slade, and Lee, Ickjai (2023) An Optimised Grid Search Based Framework for Robust Large-Scale Natural Soundscape Classification. In: Lecture Notes in Computer Science (14471) pp. 468-479. From: AI 2023: 36th Australasian Joint Conference on Artificial Intelligence, 28 November - 1 December 2023, Brisbane, QLD, Australia.

Madanayake, Adikarige, Sankupellay, Mangalam, and Lee, Ickjai (2020) Profiling the natural environment using acoustics: long-term environment monitoring through cluster structure. In: Proceedings of the 3rd International Conference on Software Engineering and Information Management. pp. 74-78. From: ICSIM'20: 3rd International Conference on Software Engineering and Information Management, 12-15 January 2020, Sydney, NSW, Australia.

Carter, A., Coles, R., McKenna, S., and Rasheed, M. (2017) Spatial management tools for coastal seagrasses in Queensland, Australia. In: Proceedings of the Australasian Coasts & Ports 2017 Conference. pp. 226-232. From: Proceedings of the Australasian Coasts & Ports 2017 Conference, 21-23 June 2017, Cairns, QLD, Australia.

Thesis

Canto, Marites Magno (2022) Benthic irradiance in the Great Barrier Reef: model, spatiotemporal patterns, and index of water quality. PhD thesis, James Cook University.