Article

Sedighkia, Mahdi, and Datta, Bithin (2024) Ecological Flow Analysis through an Ecohydraulic-Based Catchment Scale Approach. Water, 16 (1). 59.

Quichimbo-Miguitama, Fabian, Pesantez, Juan, Crespo, Patricio, Sanchez-Murillo, Ricardo, Lim, HanShe, Munksgaard, Niels, Duvert, Clement, Vystavna, Yuliya, and Birkel, Christian (2024) Key controls on water transit times along a tropical precipitation gradient. Journal of Hydrology, 645 (Part A). 132134.

Sedighkia, M., and Datta, B. (2024) Salinity management of reservoirs by linking hydrodynamic model, surrogate model, and evolutionary optimization. International Journal of Environmental Science and Technology, 21. pp. 6235-6248.

Lal, Alvin, Sharan, Ashneel, Sharma, Krishneel, Ram, Arisha, Roy, Dilip Kumar, and Datta, Bithin (2024) Scrutinizing different predictive modeling validation methodologies and data-partitioning strategies: new insights using groundwater modeling case study. Environmental Monitoring and Assessment, 196 (623).

Moy, Karl, Schaffer, Jason, Hammer, Michael P., Attard, Catherine R.M., Beheregaray, Luciano, Duncan, Richard, Lintermans, Mark, Brown, Culum, and Unmack, Peter (2023) Alternative conservation outcomes from aquatic fauna translocations: Losing and saving the Running River rainbowfish. Aquatic Conservation: marine and freshwater ecosystems, 33 (12). pp. 1445-1459.

Aulsebrook, Lucinda C., Wong, Bob B.M., and Hall, Matthew D. (2023) Can pharmaceutical pollution alter the spread of infectious disease? A case study using fluoxetine. Philosophical Transactions of the Royal Society B: Biological Sciences, 378 (1873). 20220010.

Santoro, Anthony, Chambers, Jane M., Ebner, Brendan, and Beatty, Stephen J. (2023) Climate change affects the early-life history of a freshwater turtle in a severely drying region. Austral Ecology, 48 (8). pp. 2205-2229.

Canning, A.D., and Death, R.G. (2023) Establishing riverine nutrient criteria using individual taxa thresholds. Water Research, 246. 120731.

Sedighkia, Mahdi, Jahanshahloo, Manizheh, and Datta, Bithin (2023) Evaluating Minimum Environmental Flow Requirements in Rivers: A Combined Decision-Tree Approach Integrating Hydrological, Physical Habitat, and Water Quality Indexes. Journal of Sustainable Water in the Built Environment, 9 (4). 04023006.

Sedighkia, Mahdi, and Datta, Bithin (2023) Mitigating Nitrate Concentration Using an Optimal Cropping Pattern Developed by Linking a Soil and Water Assessment Tool with Evolutionary Optimization. Applied Sciences, 13. 13183.

Sedighkia, Mahdi, and Datta, Bithin (2023) Monitoring ecological status of wetlands using linked fuzzy inference system- remote sensing analysis. Ecological Informatics, 74. 101971.

Donaldson, James C., Maeda, Ken, Iida, Midori, Kobayashi, Hirozumi, Ebner, Brendan C., and Tran, Hau Duc (2023) New distributional records of four amphidromous gobies (Gobioidei: Sicydiinae) in continental Vietnam / Nouvelles occurrences pour quatre gobies amphidromes (Gobioidei : Sicydiinae) au Vietnam continental. Cybium, 47 (4). pp. 467-472.

Ebner, Brendan C., Maeda, Ken, Donaldson, James A., Harasti, David, Lord, Clara, Hay, Vincent, Heffernan, Jason, Starrs, Danswell, Thuesen, Paul, Beatty, Stephen, Boseto, David, Copeland, Lekima K.F., Rashni, Bindiya, Hevalao, Robson S., and Keith, Philippe (2023) Pebbled places preferred by people and pipefish in a World Heritage protected area. Cybium, 47 (4). pp. 401-416.

Louzada, Rômullo Oliveira, de Oliveira Roque, Fábio, Diniz, Juliana Maria Ferreira de Souza, and Bergier, Ivan (2023) River channel avulsion in the Taquari River megafan of the Brazilian Pantanal: Remote sensing and modeling reveal recent and future changes. Applied Geography, 155. 102955.

Thiem, Jason D., Michie, Laura E., Butler, Gavin L., Ebner, Brendan C., Sharpe, Clayton P., Stuart, Ivor, and Townsend, Anthony (2023) A protected flow breaks the drought for golden perch (Macquaria ambigua) spawning along an extensive semi-arid river system. Ecohydrology, 16 (7). e2576.

Campbell, Cherie J., James, Cassandra S., Morris, Kaylene, Nicol, Jason M., Thomas, Rachael F., Nielsen, Daryl L., Gehrig, Susan L., Palmer, Gary J., Wassens, Skye, Dyer, Fiona, Southwell, Mark, Watt, Robin J., Bond, Nick R., and Capon, Samantha J. (2022) Blue, green and in-between: objectives and approaches for evaluating wetland flow regimes based on vegetation outcomes. Marine and Freshwater Research, 73. pp. 1212-1224.

Iles, Jordan A., Pettit, Neil E., Cawthray, Greg, and Grierson, Pauline F. (2022) Chemotaxonomic responses of autotrophic periphyton communities to nutrient additions in pools of an intermittent stream. Freshwater Biology, 67 (12). pp. 2148-2160.

Cao, Yanping, Xie, Zunyi, Woodgate, William, Ma, Xuanlong, Cleverly, Jamie, Pang, Yingjun, Qin, Fen, and Huete, Alfredo (2022) Ecohydrological decoupling of water storage and vegetation attributed to China’s large-scale ecological restoration programs. Journal of Hydrology, 615. 128651.

Pearson, Richard G., Davis, Aaron M., and Birtles, R. Alastair (2022) Enhancing whole-of-river conservation. Marine and Freshwater Research, 73 (6). pp. 729-741.

Villacorta Rath, Cecilia, Espinoza, Thomas, Cockayne, Bernie, Schaffer, Jason, and Burrows, Damien (2022) Environmental DNA analysis confirms extant populations of the cryptic Irwin’s turtle within its historical range. BMC Ecology and Evolution, 22. 57.

McDonald, Sarah, Holland, Aleicia, Simpson, Stuart L., Gadd, Jennifer B., Bennett, William W., Walker, Glen w., Keough, Michael J., Cresswell, Tom, and Hassell, Kathryn L. (2022) Metal forms and dynamics in urban stormwater runoff: new insights from diffusive gradients in thin-films (DGT) measurements. Water Research, 209. 117967.

Sedighkia, Mahdi, and Datta, Bithin (2022) Predicting impact of land cover change on flood peak using hybrid machine learning models. Neural Computing and Applications, 35. pp. 6723-6736.

Geyle, Hayley M., Hoskin, Conrad J., Bower, Deborah S., Catullo, Renee, Clulow, Simon, Driessen, Michael, Daniels, Katrina, Garnett, Stephen T., Gilbert, Deon, Heard, Geoffrey W., Hero, Jean-Marc, Hines, Harry, Hoffmann, Emily P., Hollis, Greg, Hunter, David A., Lemckert, Frank, Mahony, Michael, Marantelli, Gerry, McDonald, Keith R., Mitchell, Nicola J., Newell, David, Roberts, J. Dale, Scheele, Ben C., Scroggie, Michael, Vanderduys, Eric, Wassens, Skye, West, Matt, Woinarski, John C.Z., and Gillespie, Graeme R. (2022) Red hot frogs: identifying the Australian frogs most at risk of extinction. Pacific Conservation Biology, 28 (3). pp. 211-223.

Waltham, Nathan J., Schaffer, Jason, Walker, Sophie, Perry, Justin, and Nordberg, Eric (2022) Simple fence modification increases land movement prospects for freshwater turtles on floodplains. Wildlife Biology, 2022 (3). e01012.

Warne, Michael S.J., Turner, Ryan, Davis, Aaron M., Smith, Rachael, and Huang, A. (2022) Temporal variation of imidacloprid concentration and risk in waterways discharging to the Great Barrier Reef and potential causes. Science of the Total Environment, 823. 153556.

Mnaya, Bakari, Manase, Elisa, Kihwele, Emilian, Kiwango, Halima, Kiwango, Yustina, Ng'umbi, Gladys, and Wolanski, Eric (2021) Are Tanzanian National Parks affected by the water crisis? Findings and ecohydrology solutions. Ecohydrology and Hydrobiology, 21 (3). pp. 425-442.

Canning, Adam D., and Waltham, Nathan J. (2021) Ecological impact assessment of climate change and habitat loss on wetland vertebrate assemblages of the Great Barrier Reef catchment and the influence of survey bias. Ecology and Evolution, 11 (10). pp. 5244-5254.

Boyero, Luz, Pérez, Javier, López-Rojo, Naiara, Tonin, Alan M., Correa-Araneda, Francisco, Pearson, Richard G., Bosch, Jaime, Albariño, Ricardo J., Anbalagan, Sankarappan, Barmuta, Leon A., Beesley, Leah, Burdon, Francis J., Caliman, Adriano, Callisto, Marcos, Campbell, Ian C., Cardinale, Bradley J., Jesús Casas, J., Chará-Serna, Ana M., Ciapała, Szymon, Chauvet, Eric, Colón-Gaud, Checo, Cornejo, Aydeé, Davis, Aaron M., Degebrodt, Monika, Dias, Emerson S., Díaz, María E., Douglas, Michael M., Elosegi, Arturo, Encalada, Andrea C., De Eyto, Elvira, Figueroa, Ricardo, Flecker, Alexander S., Fleituch, Tadeusz, Frainer, André, França, Juliana S., García, Erica A., García, Gabriela, García, Pavel, Gessner, Mark O., Giller, Paul S., Gómez, Jesús E., Gómez, Sergio, Gonçalves, Jose F., Graça, Manuel A.S., Hall, Robert O., Hamada, Neusa, Hepp, Luiz U., Hui, Cang, Imazawa, Daichi, Iwata, Tomoya, Junior, Edson S.A., Kariuki, Samuel, Landeira-Dabarca, Andrea, Leal, María, Lehosmaa, Kaisa, M’Erimba, Charles, Marchant, Richard, Martins, Renato T., Masese, Frank O., Camden, Megan, McKie, Brendan G., Medeiros, Adriana O., Middleton, Jen A., Muotka, Timo, Negishi, Junjiro N., Pozo, Jesús, Ramírez, Alonso, Rezende, Renan S., Richardson, John S., Rincón, José, Rubio-Ríos, Juan, Serrano, Claudia, Shaffer, Angela R., Sheldon, Fran, Swan, Christopher M., Tenkiano, Nathalie S.D., Tiegs, Scott D., Tolod, Janine R., Vernasky, Michael, Watson, Anne, Yegon, Mourine J., and Yule, Catherine M. (2021) Latitude dictates plant diversity effects on instream decomposition. Science Advances, 7 (13). eabe7860.

Villacorta-Rath, Cecilia, Hoskin, Conrad J., Strugnell, Jan M., and Burrows, Damien (2021) Long distance (>20 km) downstream detection of endangered stream frogs suggests an important role for eDNA in surveying for remnant amphibian populations. PeerJ, 9. e12013.

Canning, Adam D., Joy, Michael K., and Death, Russell G. (2021) Nutrient criteria to achieve New Zealand’s riverine macroinvertebrate targets. PeerJ, 9. e11556.

Wallace, Jim, and Waltham, Nathan J. (2021) On the potential for improving water quality entering the Great Barrier Reef lagoon using constructed wetlands. Marine Pollution Bulletin, 170. 112627.

Kingsford, R.T., Bino, G,, Finlayson, C.M., Falster, D., Fitzsimons, J.A., Gawlik, D.E., Murray, N.J., Grillas, P., Gardner, R.C., Regan, T.J., Roux, D.J., and Thomas, R.F. (2021) Ramsar Wetlands of International Importance–improving conservation outcomes. Frontiers in Environmental Science, 9. 643367.

Kelleway, Jeffrey J., Iles, Jordan A., Kobayashi, Tsuyoshi, and Ling, Joanne (2021) Resilience of a native soil seed bank in a floodplain lake subjected to cropping, grazing and extended drought. Marine and Freshwater Research, 72 (6). pp. 787-799.

Wolanski, Eric (2021) Threats to biodiversity in Australia’s Burdekin River Basin. Biodiversity Online Journal, 1 (3). BOJ.000513.2021.

Kihwele, E.S., Veldhuis, M.P., Loishooki, A., Hongoa, J.R., Hopcraft, J.G.C., Olff, H., and Wolanski, E. (2021) Upstream land-use negatively affects river flow dynamics in the Serengeti National Park. Ecohydrology and Hydrobiology, 21 (1). pp. 1-12.

Waltham, Nathan, and Schaffer, Jason (2021) Will fencing floodplain and riverine wetlands from feral pig damage conserve fish community values? Ecology and Evolution, 11 (20). pp. 13780-13792.

Knowles, Lisa, Iles, Jordan, Lu, Yi, Kobayashi, Tsuyoshi, and Wen, Li (2012) Phosphorus dynamics in an ephemeral wetland ecosystem after re-flooding. Environmental Modelling & Software, 35. pp. 31-37.

Mazumder, Debashish, Johansen, Mathew, Saintilan, Neil, Iles, Jordan, Kobayashi, Tsuyoshi, Knowles, Lisa, and Wen, Li (2012) Trophic Shifts Involving Native and Exotic Fish During Hydrologic Recession in Floodplain Wetlands. Wetlands, 32. pp. 267-275.

Kobayashi, Tsuyoshi, Ryder, Darren S., Ralph, Timothy J., Mazumder, Debashish, Saintilan, Neil, Iles, Jordan, Knowles, Lisa, Thomas, Rachael, and Hunter, Simon (2011) Longitudinal spatial variation in ecological conditions in an in-channel floodplain river system during flow pulses. River Research and Applications, 27 (4). pp. 461-472.

Mazumder, Debashish, Iles, Jordan, Kelleway, Jeff, Kobayashi, Tsuyoshi, Knowles, Lisa, Saintilan, Neil, and Hollins, Suzanne (2010) Effect of acidification on elemental and isotopic compositions of sediment organic matter and macro‐invertebrate muscle tissues in food web research. Rapid Communications in Mass Spectrometry, 24 (20). pp. 2938-2942.

Iles, Jordan, Kelleway, Jeffrey, Kobayashi, Tsuyoshi, Mazumder, Debashish, Knowles, Lisa, Priddel, David, and Saintilan, Neil (2010) Grazing kangaroos act as local recyclers of energy on semiarid floodplains. Australian Journal of Zoology, 58. pp. 145-149.

Kelleway, Jeffrey, Mazumder, Debashish, Wilson, G. Glenn, Saintilan, Neil, Knowles, Lisa, Iles, Jordan, and Kobayashi, Tsuyoshi (2010) Trophic structure of benthic resources and consumers varies across a regulated floodplain wetland. Marine and Freshwater Research, 61 (4). pp. 430-440.

Book Chapter

Houde, Edward D., Able, Kenneth W., Strydom, Nadine A., Wolanski, Eric, and Arula, Timo (2022) Reproduction, Ontogeny and Recruitment. In: Whitfield, Alan K., Able, Kenneth W., Blaber, Stephen J.M., and Elliott, Michael, (eds.) Fish and Fisheries in Estuaries: A Global Perspective. © 2022 John Wiley & Sons Ltd., Hoboken, NJ, USA, 60 -187.

Canning, Adam D., and Death, Russell G. (2019) Ecosystem health indicators - freshwater environments. In: Fath, Brian D., (ed.) Encyclopedia of Ecology. Elsevier, pp. 46-60.

Arthington, Angela H., Mackay, Steve J., Ronan, Mike, James, Cassandra S., and Kennard, Mark J. (2019) Freshwater wetlands of Moreton Bay Quandamooka and catchments: Biodiversity, ecology, threats and management. In: Tibbetts, Ian R., Rothlisberg, Peter C., Neil, David C., Homburg, Tamara A., Brewer, David T., and Arthington, Angela H., (eds.) Moreton Bay Quandamooka & Catchment: Past, present, and future. The Moreton Bay Foundation, Brisbane, Queensland, Australia, pp. 319-333.

Report

McDonald, S., Williams, C., and Templeman, S. (2024) Glencore Lady Loretta Mine Receiving Environment Monitoring Program Report 2023-24. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2024) Mt Leyshon Mine Receiving Environment Monitoring Program Report: 1 Nov 2022 to 31 Oct 2023. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Williams, C., Ballantyne, S., McDonald, S., and Templeman, S. (2024) Ravenswood Gold Receiving Environment Monitoring Program: 1 Aug 2022 to 31 Jul 2023. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Stokes, C., Jarvis, D., Webster, A., Watson, I., Jalilov, S., Oliver, Y., Peake, A., Peachey, A., Yeates, S., Bruce, C., Philip, S., Prestwidge, D., Liedloff, A., Poulton, P., Price, B., and McFallan, S. (2023) Financial and socio-economic viability of irrigated agricultural development in the Roper catchment: A technical report from the CSIRO Roper River Water Resource Assessment for the National Water Grid. Report. CSIRO Publishing, Australia.

Williams, C., Templeman, S., and McDonald, S. (2023) Glencore Lady Loretta Mine EPML00982013, Assessment of Receiving Environment Outcomes from Containment Dam Releases in March 2023. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2023) Glencore Lady Loretta Mine Receiving Environment Monitoring Program Report 2022-23. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2023) Mt Leyshon Mine Receiving Environment Monitoring Program Report 1 Nov 2021 to 31 Oct 2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Pearson, Richard G., Davis, Aaron M., and Birtles, R.Alastair (2022) The Burdekin River: a review of its ecology, conservation and management. Report. James Cook University, Townsville, Queensland.

McDonald, S., Williams, C., and Templeman, S. (2022) Glencore Lady Loretta Mine Receiving Environment Monitoring Program Design Report, Version 3.1. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2022) Glencore Lady Loretta Mine Receiving Environment Monitoring Program Report 2021-22. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2022) Mt Leyshon Mine Receiving Environment Monitoring Program Design Report. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

McDonald, S., Williams, C., and Templeman, S. (2022) Mt Leyshon Mine Receiving Environment Monitoring Program Report: 1 Nov 2020 to 31 Oct 2021. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Petheram, C., Read, A., Hughes, J., Marvanek, S., Stokes, C., Kim, S., Philip, S., Peake, A., Podger, G., Devlin, K., Hayward, J., Bartley, R., Vanderbyl, T., Wilson, P., Pena Arancibia, J., Stratford, D., Watson, I., Austin, J., Yang, A., Barber, M., Ibrahimi, T., Rogers, L., Kuhnert, P., Wang, B., Potter, N., Baynes, F., Ng, S., Cousins, A., Jarvis, D., and Chilcott, C. (2022) An assessment of contemporary variations of the Bradfield Scheme. A technical report to the National Water Grid Authority from the Bradfield Scheme Assessment. Report. CSIRO, Sandy Bay, Hobart, Australia.

Kiatkoski Kim, Milena, Alvarez-Romero, Jorge, Wallace, Ken, Pannell, David, Hill, Rosemary, and Pressey, Robert (2021) Assessment of the Potential Changes in Wellbeing of Key Interest Groups in the Fitzroy River Catchment Under Alternative Development Scenarios: Traditional Owners' workshop. Report. The University of Western Australia, Perth, WA, Australia.

Kiatkoski Kim, Milena, Alvarez-Romero, Jorge, Wallace, Ken, Pannell, David, Douglas, Michael, and Pressey, Robert (2021) Assessment of the Potential Changes in Wellbeing of Key Interest Groups in the Fitzroy River Catchment Under alternative Development Scenarios: scenario team's workshop 3, Broome, Western Australia, 15–16 October. Report. The University of Western Australia, Perth, WA, Australia.

Alvarez-Romero, Jorge G., Kim, Milena Kiatkoski, Pannell, David, Douglas, Michael, Wallace, Ken, Hill, Rosemary, Adams, Vanessa, Spencer-Cotton, Alaya, Kennard, Mark, and Pressey, Bob (2021) Future scenarios for the Fitzroy River catchment: summary of key findings relevant to the WA Government Discussion Paper. Report. James Cook University, Townsville, QLD, Australia.

Kiatkoski Kim, Milena, Douglas, Michael, Pannell, David, Setterfield, Samantha, Hill, Rosemary, Jackson, Sue, Alvarez-Romero, Jorge, Laborde, Sarah, Beesley, Leah, and Canham, Caroline (2021) Transdisciplinary environmental research: trial and evaluation. Final report. Report. Northern Australia Environmental Resources Hub, Perth, WA, Australia.

Datta, Bithin, Lettenmaier, Dennis P., and Burges, Stephen J. (1983) Assessment of changes in storm and seasonal runoff response of watersheds impacted by Mt. St. Helens Ash Deposition. Report. University of Washington, Seattle, WA, USA.

Conference Item

McDonald, Sarah (2023) Monitoring stream health with macroinvertebrate assessments. In: [Presented at the Society of Environmental Toxicology and Chemistry Australasia Conference]. From: SETAC-AU 2023: Society of Environmental Toxicology and Chemistry Australasia Conference, 7-11 August 2023, Townsville, QLD, Australia.

McDonald, Sarah (2022) Pulsed streamflow in temporary waters: Impacts on macroinvertebrate community structure and implications for monitoring programs. In: [Presented at the Society of Environmental Toxicology and Chemistry Asia Pacific Conference]. From: Society of Environmental Toxicology and Chemistry Asia Pacific Conference, 5-8 September 2022, Virtual Event.

Thesis

McDonald, Sarah Isobel Mary (2021) Metal contaminants in urban stormwater runoff: composition, biological interactions and impacts. PhD thesis, The University of Melbourne.