Terzin, Marko, Laffy, Patrick W., Robbins, Steven, Yeoh, Yun Kit, Frade, Pedro R., Glasl, Bettina, Webster, Nicole S, and Bourne, David G. (2024) The road forward to incorporate seawater microbes in predictive reef monitoring. Environmental Microbiome, 19. 5.

Marangon, Emma, Uthicke, Sven, Patel, Frances, Marzinelli, Ezequiel M., Bourne, David G., Webster, Nicole S., and Laffy, Patrick W. (2023) Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 32 (20). pp. 5645-5660.

O'Brien, Paul A., Tan, Shangjin, Frade, Pedro R., Robbins, Steven J., Engelberts, J. Pamela, Bell, Sara C., Vanwonterghem, Inka, Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2023) Validation of key sponge symbiont pathways using genome-centric metatranscriptomics. Environmental Microbiology, 25 (12). pp. 3207-3224.

Terrell, Alyx P., Marangon, Emma, Webster, Nicole S., Cooke, Ira, and Quigley, Kate M. (2023) The promotion of stress tolerant Symbiodiniaceae dominance in juveniles of two coral species under simulated future conditions of ocean warming and acidification. Frontiers in Ecology and Evolution, 11. 1113357.

Botté, Emmanuelle S., Cantin, Neal E., Mocellin, Veronique J.L., O’Brien, Paul A., Rocker, Melissa M., Frade, Pedro R., and Webster, Nicole S. (2022) Reef location has a greater impact than coral bleaching severity on the microbiome of Pocillopora acuta. Coral Reefs, 41 (1). pp. 63-79.

Glasl, Bettina, Haskell, Jasmine B., Aires, Tania, Serrão, Ester, Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2021) Microbial surface biofilm responds to the growth-reproduction-senescence cycle of the dominant coral reef macroalgae sargassum spp. Life, 11 (11). 1199.

Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole S. (2021) Microbiome-mediated mechanisms contributing to the environmental tolerance of reef invertebrate species. Marine Biology, 168 (6). 89.

O'Brien, Paul A., Andreakis, Nikolaos, Tan, Shangjin, Miller, David, Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2021) Testing cophylogeny between coral reef invertebrates and their bacterial and archaeal symbionts. Molecular Ecology, 30 (15). pp. 3768-3782.

Glasl, Bettina, Robbins, Steven, Frade, Pedro R., Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole N. (2020) Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 1435-1450.

Ramsby, Blake D., Heishman, Joshua, Hoogenboom, Mia O., Whalan, Steve, and Webster, Nicole S. (2020) Dissolved inorganic nutrient enrichment does not affect sponge growth or condition. Marine Ecology - Progress Series, 634. pp. 77-88.

O'Brien, Paul A., Tan, Shangjin, Yang, Chentao, Frade, Pedro R., Andreakis, Nikolaos, Smith, Hillary A., Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2020) Diverse coral reef invertebrates exhibit patterns of phylosymbiosis. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 2211-2222.

Marchioro, Giulia, Glasl, Bettina, Engelen, Aschwin H., Serrao, Ester A., Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2020) Microbiome dynamics in the tissue and mucus of acroporid corals differ in relation to host and environmental parameters. PeerJ, 8. e9644.

Wolfe, Kennedy, Anthony, Ken, Babcock, Russell C., Bay, Line, Bourne, David G., Burrows, Damien, Byrne, Maria, Deaker, Dione, Diaz-Pulido, Guillermo, Frade, Pedro, Gonzalez-Rivero, Manuel, Hoey, Andrew, Hoogenboom, Mia, McCormick, Mark, Ortiz, Juan Carlos, Razak, Tries, Richardson, Anthony J., Roff, George, Sheppard-Brennand, Hannah, Stella, Jessica, Thompson, Angus, Watson, Sue-Ann, Webster, Nicole, Audas, Donna, Beeden, Roger, Carver, Jesseca, Cowlishaw, Mel, Dyer, Michelle, Groves, Paul, Horne, Dylan, Thiault, Lauric, Vains, Jason, Wachenfeld, David, Weekers, Damien, Williams, Genevieve, and Mumby, Peter J. (2020) Priority species to support the functional integrity of coral reefs. Oceanography and Marine Biology: an annual review, 58. pp. 179-318.

Frade, Pedro R., Glasl, Bettina, Matthews, Samuel A., Mellin, Camille, Serrão, Ester A., Wolfe, Kennedy, Mumby, Peter J., Webster, Nicole S., Bourne, David G., and UNSPECIFIED (2020) Spatial patterns of microbial communities across surface waters of the Great Barrier Reef. Communications Biology, 3. 442.

Pascelli, Cecilia, Laffy, Patrick W., Botté, Emmanuelle, Kupresanin, Marija, Rattei, Thomas, Lurgi, Miguel, Ravasi, Timothy, and Webster, Nicole S. (2020) Viral ecogenomics across the Porifera. Microbiome, 8. 144.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2019) Disentangling the effect of host-genotype and environment on the microbiome of the coral Acropora tenuis. PeerJ, 7. e6377.

O'Brien, Paul, Webster, Nicole S., Miller, David J., and Bourne, David G. (2019) Host-microbe coevolution: applying evidence from model systems to complex marine invertebrate holobionts. mBio, 10 (1). e02241-18.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., Thomas, Torsten, Schaffelke, Britta, and Webster, Nicole S. (2019) Microbial indicators of environmental perturbations in coral reef ecosystems. Microbiome, 7. 94.

Jaspers, Cornelia, Fraune, Sebastian, Arnold, A. Elizabeth, Miller, David J., Bosch, Thomas C.G., Voolstra, Christian R., Adamska, Maja, Ainsworth, Tracy, Ball, Eldon, Boote, Chlöe, Bourne, David, Butterfield, Nicholas J., Chan, Cheong Xin, Cooke, Ira, Cowman, Peter F., Darling, Aaron, Davy, Simon K., Mohamed, Amin, Fabricius, Katharina, Valero Fortunato, Sofia V., Hernandez Agreda, Alejandra, Hoogenboom, Mia, Moya, Aurelie, Pita, Lucia, Ragan, Mark A., Robbins, Steven J., Andrade Rodriguez, Natalia R., Sakamaki, Kazuhiro, Schoepf, Verena, Seemann, Thorsten, Shinzato, Chuya, Stolarski, Jarosław, Strugnell, Jan, Takahashi, Shunichi, Tang, Sen-Lin, Webster, Nicole N, Whitelaw, Brooke, and Ying, Hua (2019) Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches. Zoology, 133. pp. 81-87.

Hoj, Lone, Levy, Natalie, Baillie, Brett K., Clode, Peta L., Strohmaier, Raphael C., Siboni, Nachshon, Webster, Nicole S., Uthicke, Sven, and Bourne, David G. (2018) Crown-of-thorns sea star Acanthaster cf. solaris has tissue-characteristic microbiomes with potential roles in health and reproduction. Applied and Environmental Microbiology, 84 (13).

Ramsby, Blake D., Hoogenboom, Mia O., Whalan, Steve, and Webster, Nicole S. (2018) Elevated seawater temperature disrupts the microbiome of an ecologically important bioeroding sponge. Molecular Ecology, 27 (8). pp. 2124-2137.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2018) Exploring the diversity-stability paradigm using sponge microbial communities. Scientific Reports, 8. 8425.

Pascelli, Cecilia, Laffy, Patrick W., Kupresanin, Marija, Ravasi, Timothy, and Webster, Nicole S. (2018) Morphological characterization of virus-like particles in coral reef sponges. PeerJ, 6. e5625.

Laffy, Patrick W., Wood-Charlson, Elisha M., Turaev, Dmitrij, Jutz, Sabrina, Pascelli, Cecilia, Botté, Emmanuelle S., Bell, Sara C., Peirce, Tyler E., Weynberg, Karen D., van Oppen, Madeleine J.H., Rattei, Thomas, and Webster, Nicole S. (2018) Reef invertebrate viromics: diversity, host specificity and functional capacity. Environmental Microbiology, 20 (6). pp. 2125-2141.

Ramsby, Blake D., Hoogenboom, Mia O., Smith, Hillary A., Whalan, Steve, and Webster, Nicole S. (2018) The bioeroding sponge Cliona orientalis will not tolerate future projected ocean warming. Scientific Reports, 8. 8302.

Pineda, Mari-Carmen, Strehlow, Brian, Kamp, Jasmine, Duckworth, Alan, Jones, Ross, and Webster, Nicole S. (2017) Effects of combined dredging-related stressors on sponges: a laboratory approach using realistic scenarios. Scientific Reports, 7 (1). 5155.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., and Webster, Nicole S. (2017) Establishing microbial baselines to identify indicators of coral reef health. Microbiology Australia, 39 (1). pp. 42-46.

Astudillo-Garcia, Carmen, Bell, James J., Webster, Nicole S., Glasl, Bettina, Jompa, Jamaluddin, Montoya, Jose M., and Taylor, Michael W. (2017) Evaluating the core microbiota in complex communities: a systematic investigation. Environmental Microbiology, 19 (4). pp. 1450-1462.

Glasl, Bettina, Webster, Nicole S., and Bourne, David G. (2017) Microbial indicators as a diagnostic tool for assessing water quality and climate stress in coral reef ecosystems. Marine Biology, 164. 91.

Ramsby, Blake D., Hoogenboom, Mia O., Whalan, Steve, Webster, Nicole S., and Thompson, Angus (2017) A decadal analysis of bioeroding sponge cover on the inshore Great Barrier Reef. Scientific Reports, 7. 2706.

Bourne, David G., Morrow, Kathleen M., and Webster, Nicole S. (2016) Insights into the coral microbiome: underpinning the health and resilience of reef ecosystems. Annual Review of Microbiology, 70. pp. 317-340.

Bennett, Holly M., Altenrath, Christine, Woods, Lisa, Davy, Simon K., Webster, Nicole S., and Bell, James J. (2016) Interactive effects of temperature and pCO2 on sponges: from the cradle to the grave. Global Change Biology, 23. pp. 2031-2046.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Abdo, David, Webster, Nicole, and Whalan, Steve (2014) The influence of habitat on post-settlement processes, larval production and recruitment in a common coral reef sponge. Journal of Experimental Marine Biology and Ecology, 461. pp. 162-172.

Abdul Wahab, M., De Nys, R., Webster, N., and Whalan, S. (2014) Phenology of sexual reproduction in the common coral reef sponge, Carteriospongia foliascens. Coral Reefs, 33 (2). pp. 381-394.

Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Webster, Nicole, and Whalan, Steve (2014) Larval behaviours and their contribution to the distribution of the intertidal coral reef sponge Carteriospongia foliascens. PLoS ONE, 9 (5). e98181. pp. 1-13.

Abdul Wahab, Muhammad, Fromont, J., Whalan, S., Webster, N., and Andreakis, N. (2014) Combining morphometrics with molecular taxonomy: how different are similar foliose keratose sponges from the Australian tropics? Molecular Phylogenetics and Evolution, 73. pp. 23-39.

Morrow, Kathleen M., Bourne, David G., Humphrey, Craig, Botté, Emmanuelle S., Laffy, Patrick, Zaneveld, Jesse, Uthicke, Sven, Fabricius, Katharina E., and Webster, Nicole S. (2014) Natural volcanic CO2 seeps reveal future trajectories for host-microbial associations in corals and sponges. ISME Journal: multidisciplinary journal of microbial ecology, 9 (4). pp. 894-908.

Bourne, David G., Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W., and Webster, Nicole (2013) Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 7. pp. 1452-1458.

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2012) The marine sponge Ianthella basta can recover from stress-induced tissue regression. Hydrobiologia, 687 (1). pp. 227-235.

Whalan, Steve, Webster, Nicole S., and Negri, Andrew P. (2012) Crustose coralline algae and a cnidarian neuropeptide trigger larval settlement in two coral reef sponges. PLoS ONE, 7 (1). e30386. pp. 1-8.

Andreakis, Nikos, Luter, Heidi M., and Webster, Nicole S. (2012) Cryptic speciation and phylogeographic relationships in the elephant ear sponge Ianthella basta (Porifera, Ianthellidae) from northern Australia. Zoological Journal of the Linnean Society, 166 (2). pp. 225-235.

Luter, Heidi M., Whalan, Steve, and Webster, Nicole S. (2012) Thermal and sedimentation stress are unlikely causes of brown spot syndrome in the coral reef sponge, Ianthella basta. PLoS ONE, 7 (6). e39779. pp. 1-9.

Webster, Nicole S., Botté, Emmanuelle S., Soo, Rochelle M., and Whalan, Steve (2011) The larval sponge holobiont exhibits high thermal tolerance. Environmental Microbiology Reports, 3 (6). pp. 756-762.

Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.

Bannister, Raymond, Hoogenboom, Mia, Anthony, Kenneth R. N., Battershill, Chris, Whalan, Stephen, Webster, Nicole, and De Nys, Rocky (2011) Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series, 423. pp. 95-100.

Luter, Heidi M., Whalan, Steve, and Webster, Nicole S. (2010) Exploring the role of microorganisms in the disease-like syndrome affecting the sponge Ianthella basta. Applied and Environmental Microbiology, 76 (17). pp. 5736-5744.

Webster, Nicole S., Taylor, Michael W., Behnam, Faris, Lücker, Sebastian, Rattei, Thomas, Whalan, Stephen, Horn, Matthias, and Wagner, Michael (2010) Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environmental Microbiology, 12 (8). pp. 2070-2082.

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2010) Prevalence of tissue necrosis and brown spot lesions in a common marine sponge. Marine and Freshwater Research, 61 (4). pp. 484-489.

Webster, Nicole S., Negri, Andrew P., Webb, Richard I., and Hill, Russell T. (2002) A spongin-boring α-proteobacterium is the etiological agent of disease in the Great Barrier Reef sponge Rhopaloeides odorabile. Marine Ecology Progress Series, 232. pp. 305-309.

Webster, Nicole S., Webb, Richard I., Ridd, Michael J., Hill, Russell T., and Negri, Andrew P. (2001) The effects of copper on the microbial community of a coral reef sponge. Environmental Microbiology, 3 (1). pp. 19-31.