Marzonie, Magena R., Nitschke, Matthew R., Bay, Line K., Bourne, David G., and Harrison, Hugo B. (2024) Symbiodiniaceae diversity varies by host and environment across thermally distinct reefs. Molecular Ecology, 33 (9). e17342.

Burn, D., Hoey, A.S., Matthews, S., Harrison, H.B., and Pratchett, M.S. (2023) Differential bleaching susceptibility among coral taxa and colony sizes, relative to bleaching severity across Australia's Great Barrier Reef and Coral Sea Marine Parks. Marine Pollution Bulletin, 191. 114907.

Cannon, Sara E., Donner, Simon D., Liu, Angela, González Espinosa, Pedro C., Baird, Andrew H., Baum, Julia K., Bauman, Andrew G., Beger, Maria, Benkwitt, Cassandra E., Birt, Matthew J., Chancerelle, Yannick, Cinner, Joshua E., Crane, Nicole L., Denis, Vianney, Depczynski, Martial, Fadli, Nur, Fenner, Douglas, Fulton, Christopher J., Golbuu, Yimnang, Graham, Nicholas A.J., Guest, James, Harrison, Hugo B., Hobbs, Jean-Paul A., Hoey, Andrew S., Holmes, Thomas H., Houk, Peter, Januchowski-Hartley, Fraser A., Jompa, Jamaluddin, Kuo, Chao-Yang, Limmon, Gino Valentino, Lin, Yuting V., McClanahan, Timothy R., Muenzel, Dominic, Paddack, Michelle J., Planes, Serge, Pratchett, Morgan S., Radford, Ben, Reimer, James Davis, Richards, Zoe T., Ross, Claire L., Rulmal Jr., John, Sommer, Brigitte, Williams, GarethJ., and Wilson, Shaun K. (2023) Macroalgae exhibit diverse responses to human disturbances on coral reefs. Global Change Biology, 29 (12). pp. 3318-3330.

Van Woesik, Robert, Shlesinger, Tom, Grottoli, Andrea G., Toonen, Rob J., Thurber, Rebecca Vega, Warner, Mark E., Hulver, Ann Marie, Chapron, Leila, McLachlan, Rowan H., Albright, Rebecca, Crandall, Eric, DeCarlo, Thomas M., Donovan, Mary K., Eirin-Lopez, Jose, Harrison, Hugo B., Heron, Scott F., Huang, Danwei, Humanes, Adriana, Krueger, Thomas, Madin, Joshua S., Manzello, Derek, McManus, Lisa C., Matz, Mikhail, Muller, Erinn M., Rodriguez-Lanetty, Mauricio, Vega-Rodriguez, Maria, Voolstra, Christian R., and Zaneveld, Jesse (2022) Coral-bleaching responses to climate change across biological scales. Global Change Biology, 28 (14). pp. 4229-4250.

Payet, Samuel D., Pratchett, Morgan S., Saenz-agudelo, Pablo, Berumen, Michael L., Dibattista, Joseph D., and Harrison, Hugo B. (2022) Demographic histories shape population genomics of the common coral grouper (Plectropomus leopardus). Evolutionary Applications, 15 (8). pp. 1221-1235.

Gurdek-Bas, Rodrigo, Benthuysen, Jessica A., Harrison, Hugo B., Zenger, Kyall R., and van Herwerden, Lynne (2022) The El Niño Southern Oscillation drives multidirectional inter-reef larval connectivity in the Great Barrier Reef. Scientific Reports, 12 (1). 21290.

Nielsen, J.J.V., Matthews, G., Frith, K.R., Harrison, H.B., Marzonie, M.R., Slaughter, K.L., Suggett, D.J., and Bay, L.K. (2022) Experimental considerations of acute heat stress assays to quantify coral thermal tolerance. Scientific Reports, 12 (1). 16831.

McLean, Dianne L., Ferreira, Luciana C., Benthuysen, Jessica A., Miller, Karen J., Schlappy, Marie-Lise, Ajemian, Matthew J., Berry, Oliver, Birchenough, Silvana N.R., Bond, Todd, Boschetti, Fabio, Bull, Ann S., Claisse, Jeremy T., Condie, Scott A., Consoli, Pierpaolo, Coolen, Joop W.P., Elliott, Michael, Fortune, Irene S., Fowler, Ashley M., Gillanders, Bronwyn M., Harrison, Hugo B., Hart, Kristen M., Henry, Lea-Anne, Hewitt, Chad L., Hicks, Natalie, Hock, Karlo, Hyder, Kieran, Love, Milton, Macreadie, Peter I., Miller, Robert J., Montevecchi, William A., Nishimoto, Mary M., Page, Henry M., Paterson, David M., Pattiaratchi, Charitha B., Pecl, Gretta T., Porter, Joanne S., Reeves, David B., Riginos, Cynthia, Rouse, Sally, Russell, Debbie J.F., Sherman, Craig D.H., Teilmann, Jonas, Todd, Victoria L.G., Treml, Eric A., Williamson, David H., and Thums, Michele (2022) Influence of offshore oil and gas structures on seascape ecological connectivity. Global Change Biology, 28 (11). pp. 3515-3536.

Fitzgerald, L.M., Harrison, H.B., Coker, D.J., Saenz-Agudelo, P., Srinivasan, M., Majoris, J.E., Bostrom Einarsson, L., Pujol, B., Bennett-Smith, M., Thorrold, S.R., Planes, S., Jones, G.P., and Berumen, M.L. (2022) Rank change and growth within social hierarchies of the orange clownfish, Amphiprion percula. Marine Biology, 169 (10). 128.

Marzonie, Magena R., Bay, Line K., Bourne, David G., Hoey, Andrew S., Matthews, Samuel, Nielsen, Josephine J.V., and Harrison, Hugo B. (2022) The effects of marine heatwaves on acute heat tolerance in corals. Global Change Biology, 29 (2). pp. 404-416.

Hoey, A.S., Harrison, H., McClure, E.C., Burn, D., Barnett, A., Cresswell, B., Doll, P.C., Galbraith, G., and Pratchett, M.S. (2021) Coral Sea Marine Park Coral Reef Health Survey 2021: Report on reef surveys February 2021. Report. Parks Australia, Townsville, QLD, Australia.

Hamilton, Richard J., Lozano-cortés, Diego, Bode, Michael, Almany, Glenn R., Harrison, Hugo B., Pita, John, Saenz-agudelo, Pablo, Gereniu, Collin, Waldie, Pete A., Peterson, Nate, Choat, John Howard, and Berumen, Michael L. (2021) Larval dispersal and fishing pressure influence recruitment in a coral reef fishery. Journal of Applied Ecology, 58 (12). pp. 2924-2935.

Uthicke, Sven, Pratchett, Morgan S., Messmer, Vanessa, and Harrison, Hugo (2021) Limited genetic signal from potential cloning and selfing within wild populations of coral-eating crown-of-thorns seastars (Acanthaster cf. solaris). Coral Reefs, 40. pp. 131-138.

Lavin, Charles P., Jones, Geoffrey P., Williamson, David H., and Harrison, Hugo B. (2021) Minimum size limits and the reproductive value of numerous, young, mature female fish. Proceedings of the Royal Society B: Biological Sciences, 288 (1946). 20202714.

Lowe, Jake R., Payet, Samuel D., Harrison, Hugo B., Hobbs, Jean-Paul A., Hoey, Andrew S., Taylor, Brett M., Sinclair-Taylor, Tane H., and Pratchett, Morgan S. (2021) Regional versus latitudinal variation in the life-history traits and demographic rates of a reef fish, Centropyge bispinosa, in the Coral Sea and Great Barrier Reef Marine Parks, Australia. Journal of Fish Biology, 99 (5). pp. 1602-1612.

Saenz-Agudelo, Pablo, and Harrison, Hugo B. (2021) Stochastic nature of larval dispersal at sea. Molecular Ecology, 30 (10). pp. 2197-2198.

Payet, Samuel D., Lowe, Jake R., Mapstone, Bruce D., Pratchett, Morgan S., Sinclair-Taylor, Tane H., Taylor, Brett M., Waldie, Peter A., and Harrison, Hugo B. (2020) Comparative demography of commercially important species of coral grouper, Plectropomus leopardus and P. laevis, from Australia's great barrier reef and Coral Sea marine parks. Journal of Fish Biology, 97 (4). pp. 1165-1176.

Rueger, Theresa, Harrison, Hugo B., Buston, Peter M., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2020) Natal philopatry increases relatedness within groups of coral reef cardinalfish: Natal philopatry increases relatedness. Proceedings of the Royal Society of London Series B, Biological Sciences, 287 (1930). 20201133.

Harrison, Hugo B., Bode, Michael, Williamson, David H., Berumen, Michael L., and Jones, Geoffrey P. (2020) A connectivity portfolio effect stabilizes marine reserve performance. Proceedings of the National Academy of Sciences, 117 (41). pp. 25595-25600.

DeCarlo, Thomas M., Harrison, Hugo B., Gajdzik, Laura, Alaguarda, Diego, Rodolfo-Metalpa, Riccardo, D'Olivo, Juan, Liu, Gang, Patalwala, Diana, and McCulloch, Malcolm T. (2019) Acclimatization of massive reef-building corals to consecutive heatwaves. Proceedings of the Royal Society of London Series B, Biological Sciences, 286 (1898).

Harrison, Hugo B., Álvarez-Noriega, Mariana, Baird, Andrew H., Heron, Scott F., Macdonald, Chancey, and Hughes, Terry P. (2019) Back-to-back coral bleaching events on isolated atolls in the Coral Sea. Coral Reefs, 38 (4). pp. 713-719.

Rueger, Theresa, Harrison, Hugo B., Gardiner, Naomi M., Berumen, Michael L., and Jones, Geoffrey P. (2019) Extra‐pair mating in a socially monogamous and paternal mouth‐brooding cardinalfish. Molecular Ecology, 28 (10). pp. 2625-2635.

Bode, Michael, Leis, Jeffrey M., Mason, Luciano B., Williamson, David H., Harrison, Hugo B., Choukroun, Severine, and Jones, Geoffrey P. (2019) Successful validation of a larval dispersal model using genetic parentage data. PLoS Biology, 17 (7). e3000380.

DeCarlo, Thomas M., and Harrison, Hugo B. (2019) An enigmatic decoupling between heat stress and coral bleaching on the Great Barrier Reef. PeerJ, 7. e7473.

Bode, Michael, Williamson, David H., Harrison, Hugo B., Outram, Nick, and Jones, Geoffrey P. (2018) Estimating dispersal kernels using genetic parentage data. Methods in Ecology and Evolution, 9. pp. 490-501.

Sørdalen, Tonje K., Halvorsen, Kim T., Harrison, Hugo B., Ellis, Charlie D., Vøllestad, Leif Asbjørn, Knutsen, Halvor, Moland, Even, and Olsen, Esben M. (2018) Harvesting changes mating behaviour in European lobster. Evolutionary Applications, 11 (6). pp. 963-977.

Hughes, Terry P., Anderson, Kristen D., Connolly, Sean R., Heron, Scott F., Kerry, James T., Lough, Janice M., Baird, Andrew H., Baum, Julia, Berumen, Michael L., Bridge, Tom C., Claar, Danielle C., Eakin, C. Mark, Gilmour, James P., Graham, Nicholas A.J., Harrison, Hugo, Hobbs, Jean-Paul A., Hoey, Andrew S., Hoogenboom, Mia, Lowe, Ryan J., McCulloch, Malcolm T., Pandolfi, John M., Pratchett, Morgan, Schoepf, Verena, Torda, Gergely, and Wilson, Shaun K. (2018) Spatial and temporal patterns of mass bleaching of corals in the Anthropocene. Science, 359 (6371). pp. 80-83.

He, Song, Harrison, Hugo B., and Berumen, Michael L. (2018) Species delineation and hybrid identification using diagnostic nuclear markers for Plectropomus leopardus and Plectropomus maculatus. Fisheries Research, 206. pp. 287-291.

Hughes, Terry P., Kerry, James T., Álvarez-Noriega, Mariana, Alvarez-Romero, Jorge G., Anderson, Kristen D., Baird, Andrew, Babcock, Russell C., Beger, Maria, Bellwood, David, Berkelmans, Ray, Bridge, Tom C., Butler, Ian R., Byrne, Maria, Cantin, Neal E., Comeau, Steeve, Connolly, Sean, Cumming, Graeme S., Dalton, Steven J., Diaz-Pulido, Guillermo, Eakin, C. Mark, Figueira, Will F., Gilmour, James P., Harrison, Hugo B., Heron, Scott F., Hoey, Andrew S., Hobbs, Jean-Paul A., Hoogenboom, Mia O., Kennedy, Emma V., Kuo, Chao-Yang, Lough, Janice M., Lowe, Ryan J., Liu, Gang, McCulloch, Malcolm T., Malcolm, Hamish A., McWilliam, Michael J., Pandolfi, John M., Pears, Rachel J., Pratchett, Morgan S., Schoepf, Verena, Simpson, Tristan, Skirving, William J., Sommer, Brigitte, Torda, Gergely, Wachenfeld, David R., Willis, Bette L., and Wilson, Shaun (2017) Global warming and recurrent mass bleaching of corals. Nature, 543 (7645). pp. 373-377.

Almany, Glenn R., Planes, Serge, Thorrold, Simon R., Berumen, Michael L., Bode, Michael, Saenz-Agudelo, Pablo, Bonin, Mary C., Frisch, Ashley J., Harrison, Hugo B., Messmer, Vanessa, Nanninga, Gerrit B., Priest, Mark A., Srinivasan, Maya, Sinclair-Taylor, Tane, Williamson, David H., and Jones, Geoffrey P. (2017) Larval fish dispersal in a coral-reef seascape. Nature Ecology & Evolution, 1 (6). pp. 1-4.

Harrison, Hugo B., Pratchett, Morgan S., Messmer, Vanessa, Saenz-Agudelo, Pablo, and Berumen, Michael L. (2017) Microsatellites reveal genetic homogeneity among outbreak populations of crown-of-thorns starfish (Acanthaster cf. solaris) on Australia's Great Barrier Reef. Diversity, 9 (1). 16.

Harrison, Hugo B., Berumen, Michael L., Saenz-Agudelo, Pablo, Salas, Eva, Williamson, David H., and Jones, Geoffrey P. (2017) Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish. Molecular Ecology, 26 (20). pp. 5692-5704.

Wen, Colin K.C., Bonin, Mary C., Harrison, Hugo B., Williamson, David H., and Jones, Geoffrey (2016) Dietary shift in juvenile coral trout (Plectropomus maculatus) following coral reef degradation from a flood plume disturbance. Coral Reefs, 35 (2). pp. 451-455.

Bonin, Mary C., Harrison, Hugo B., Williamson, David H., Frisch, Ashley J., Saenz-Agudelo, Pablo, Berumen, Michael L., and Jones, Geoffrey P. (2016) The role of marine reserves in the replenishment of a locally impacted population of anemonefish on the Great Barrier Reef. Molecular Ecology, 25 (2). pp. 487-499.

Bonin, Mary C., Saenz-Agudelo, Pablo, Harrison, Hugo B., Nanninga, Gerrit B., van der Meer, Martin H., Mansour, Hicham, Perumal, Sadhavisan, Jones, Geoffrey P., and Berumen, Michael L. (2016) Characterization and cross-amplification of microsatellite markers in four species of anemonefish (Pomacentridae, Amphiprion spp.). Marine Biodiversity, 46 (1). pp. 135-140.

Williamson, David H., Harrison, Hugo B., Almany, Glenn R., Berumen, Michael L., Bode, Michael, Bonin, Mary C., Choukroun, Severine, Doherty, Peter J., Frisch, Ashley J., Saenz-Agudelo, Pablo, and Jones, Geoffrey P. (2016) Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park. Molecular Ecology, 25 (24). pp. 6039-6054.

Bode, Michael, Williamson, David H., Weeks, Rebecca, Jones, Geoff P., Almany, Glenn R., Harrison, Hugo B., Hopf, Jess K., and Pressey, Robert L. (2016) Planning marine reserve networks for both feature representation and demographic persistence using connectivity patterns. PLoS ONE, 11 (5). pp. 1-23.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Al-Salamah, Manalle, Messmer, Vanessa, Pratchett, Morgan S., and Berumen, Michael L. (2015) Microsatellite multiplex assay for the coral-eating crown-of-thorns starfish, Acanthaster cf. planci. Conservation Genetics Resources, 7 (3). pp. 627-630.

Rueger, Theresa, Harrison, Hugo B., Jones, Geoffrey P., Mansour, Hicham, and Berumen, Michael L. (2015) Resolving genealogical relationships in the Pyjama cardinalfish, Sphaeramia nematoptera (Apogonidae) with 23 novel microsatellite markers. Conservation Genetics Resources, 7 (3). pp. 623-626.

Saenz-Agudelo, Pablo, Dibattista, Joseph D., Piatek, Marek J., Gaither, Michelle R., Harrison, Hugo B., Nanninga, Gerrit B., and Berumen, Michael L. (2015) Seascape genetics along environmental gradients in the Arabian Peninsula: insights from ddRAD sequencing of anemonefishes. Molecular Ecology, 24 (24). pp. 6241-6255.

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Mansour, Hicham, Perumal, Sadhasivam, Williamson, David H., and Berumen, Michael L. (2014) Validation of microsatellite multiplexes for parentage analysis in a coral reef fish (Lutjanus carponotatus, Lutjanidae). Conservation Genetics Resources, 6 (4). pp. 803-806.

Simpson, Stephen D., Harrison, Hugo B., Claereboudt, Michel R., and Planes, Serge (2014) Long-distance dispersal via ocean currents connects Omani clownfish populations throughout entire species range. PLoS ONE, 9 (9). e107610. pp. 1-7.

Harrison, Hugo B., Feldheim, Kevin A., Jones, Geoffrey P., Ma, Kayan, Mansour, Hicham, Perumal, Sadhasivan, Williamson, David H., and Berumen, Michael L. (2014) Validation of microsatellite multiplexes for parentage analysis and species discrimination in two hybridizing species of coral reef fish (Plectropomus spp., Serranidae). Ecology and Evolution, 4 (11). pp. 2046-2057.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) On minimizing assignment errors and the trade-off between false positives and negatives in parentage analysis. Molecular Ecology, 22 (23). pp. 5738-5742.

Harrison, Hugo B., Saenz-Agudelo, Pablo, Planes, Serge, Jones, Geoffrey P., and Berumen, Michael L. (2013) Relative accuracy of three common methods of parentage analysis in natural populations. Molecular Ecology, 22 (4). pp. 1158-1170.

Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., and Jones, Geoffrey P. (2012) Larval export from marine reserves and the recruitment benefit for fish and fisheries. Current Biology, 22 (11). pp. 1023-1028.

Harrison, Hugo B. (2012) Genetic parentage analysis as a tool for measuring larval connectivity in a network of marine reserves. PhD thesis, James Cook University.