Johnson, Johanna E., Welch, David J., van Hooidonk, Ruben, Tracey, Dieter, Chandrasa, Ganesha, Molinari, Bianca, Triani, Deti, Tania, Casandra, and Susanto, Handoko (2023) Climate change implications for the Arafura and Timor Seas region: assessing vulnerability of marine systems to inform management and conservation. Climatic Change, 176. 88.

Thiault, Lauric, Jupiter, Stacy, Johnson, Johanna E., Cinner, Joshua E., Jarvis, Rebecca M., Heron, Scott F., Maina, Joseph M., Marshall, Nadine A., Marshall, Paul A., and Claudet, Joachim (2021) Harnessing the potential of vulnerability assessments for managing social-ecological systems. Ecology and Society, 26 (2). 1.

Dutra, Leo X.C., Haywood, Michael D.E., Singh, Shubha, Ferreira, Marta, Johnson, Johanna E., Veitayaki, Joeli, Kininmonth, Stuart, Morris, Cherrie W., and Piovano, Susanna (2021) Synergies between local and climate-driven impacts on coral reefs in the Tropical Pacific: A review of issues and adaptation opportunities. Marine Pollution Bulletin, 164. 111922.

Devlin, Michelle J., Lyons, Brett P., Johnson, Johanna, and Hills, Jeremy (2021) The tropical Pacific Oceanscape: Current issues, solutions and future possibilities. Marine Pollution Bulletin, 166. 112181. pp. 1-10.

Johnson, Johanna E., Hooper, Eryn, and Welch, David J. (2020) Community marine monitoring toolkit: a tool developed in the Pacific to inform community-based marine resource management. Marine Pollution Bulletin, 159. 111498.

Basel, Britt, Goby, Gillian, and Johnson, Johanna (2020) Community-based adaptation to climate change in villages of Western Province, Solomon Islands. Marine Pollution Bulletin, 156. 111266.

Johnson, Johanna E., Allain, Valerie, Basel, Britt, Bell, Johann D., Chin, Andrew, Dutra, Leo X. C., Hooper, Eryn, Loubser, David, Lough, Janice, Moore, Bradley R., and Nicol, Simon (2020) Impacts of climate change on marine resources in the Pacific Island region. In: Kumar, Lalit, (ed.) Climate Change and Impacts in the Pacific. Springer Climate . Springer, Cham, Switzerland, pp. 359-402.

Bell, Johann D., Cisneros-Montemayor, Andrés, Hanich, Quentin, Johnson, Johanna E., Lehodey, Patrick, Moore, Bradley R., Pratchett, Morgan S., Reygondeau, Gabriel, Senina, Inna, Virdin, John, and Wabnitz, Colette C.C. (2018) Adaptations to maintain the contributions of small-scale fisheries to food security in the Pacific Islands. Marine Policy, 88. pp. 303-314.

Ensor, J.E., Park, S.E., Attwood, S.J., Kaminski, A.M., and Johnson, J.E. (2018) Can community-based adaptation increase resilience? Climate and Development Journal, 10 (2). pp. 134-151.

Johnson, Johanna E., Bell, Johann D., Allain, Valerie, Hanich, Quentin, Lehodey, Patrick, Moore, Brad R., Nicol, Simon, Pickering, Tim, and Senina, Inna (2018) The Pacific Island region: fisheries, aquaculture and climate change. In: Phillips, Bruce F., and Pérez-Ramírez, Mónica, (eds.) Climate Change Impacts on Fisheries and Aquaculture: a global analysis. Wiley-Blackwell, Hoboken, NJ, USA, pp. 333-379.

Johnson, Johanna (2018) Development and implementation of a vulnerability assessment tool to inform decision-making in socio-ecological systems. PhD thesis, James Cook University.

Johnson, Johanna E., Welch, David J., Maynard, Jeffrey A., Bell, Johann D., Pecl, Gretta, Robins, Julie, and Saunders, Thor (2016) Assessing and reducing vulnerability to climate change: moving from theory to practical decision-support. Marine Policy, 74. pp. 220-229.

Johnson, Johanna E., and Welch, David J. (2016) Climate change implications for Torres Strait fisheries: assessing vulnerability to inform adaptation. Climatic Change, 135 (3). pp. 611-624.

Maynard, Jeffrey A., Beeden, Roger, Puotinen, Marjetta, Johnson, Johanna E., Marshall, Paul, van Hooidonk, Ruben, Heron, Scott F., Devlin, Michelle, Lawrey, Eric, Dryden, Jen, Ban, Natalie, Wachenfeld, David, and Planes, Serge (2016) Great Barrier Reef no-take areas include a range of disturbance regimes. Conservation Letters, 9 (3). pp. 191-199.

Johnson, Johanna, and Holbrook, Neil (2014) Adaptation of Australia's marine ecosystems to climate change: using science to inform conservation management. International Journal of Ecology, 2014. 140354.

Holbrook, Neil J., and Johnson, Johanna E. (2014) Climate change impacts and adaptation of commercial marine fisheries in Australia: a review of the science. Climatic Change, 124 (4). pp. 703-715.

Beeden, R., Maynard, J., Johnson, J., Dryden, J., Kininmonth, S., and Marshall, P. (2014) No-anchoring areas reduce coral damage in an effort to build resilience in Keppel Bay, southern Great Barrier Reef. Australasian Journal of Environmental Management, 21 (3). pp. 311-319.

Bell, Johann D., Ganachaud, Alexandre, Gehrke, Peter C., Griffiths, Shane P., Hobday, Alistair J., Hoegh-Guldberg, Ove, Johnson, Johanna E., Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Matear, Richard J., Pickering, Timothy D., Pratchett, Morgan S., Sen Gupta, Alex, Senina, Inna, and Waycott, Michelle (2013) Mixed responses of tropical Pacific fisheries and aquaculture to climate change. Nature Climate Change, 3 (6). pp. 591-599.

Johnson, Johanna, Maynard, Jeffrey, Devlin, Michelle, Wilkinson, Scott, Anthony, Ken, Yorkston, Hugh, Heron, Scott, Puotinen, Marji, and Van Hooidonk, Ruben (2013) 2013 scientific consensus statement: resilience of Great Barrier Reef marine ecosystems and drivers of change. Report. CSIRO Publishing, Queensland, Australia.

Bell, Johann D., Andrew, Neil L., Batty, Michael J., Chapman, Lindsay B., Dambacher, Jeffrey M., Dawson, Brian, Ganachaud, Alexandre S., Gehrke, Peter C., Hampton, John, Hobday, Alistair J., Hoegh-Guldberg, Ove, Johnson, Johanna E., Kinch, Jeff P., Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Timothy D., Pratchett, Morgan S., Vunisea, Aliti, and Waycott, Michelle (2011) Adapting tropical Pacific fisheries and aquaculture to climate change: management measures, policies and investments. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 803-876.

Johnson, Johanna, Brando, Vittorio, Devlin, Michelle, McKenzie, Len, Morris, Sheridan, Schaffelke, Britta, Thompson, Angus, Waterhouse, Jane, and Waycott, M (2011) Reef Rescue Marine Monitoring Program: 2009/2010 synthesis report. Report. Reef and Rainforest Research Centre, Cairns, QLD.

Bell, Johann D., Johnson, Johanna E., Ganachaud, Alex S., Gehrke, Peter C., Hobday, Alistair J., Hoegh-Guldberg, Ove, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Tim, Pratchett, Morgan S., and Waycott, Michelle (2011) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change: summary for Pacific Island Countries and Territories. Secretariat of the Pacific Community, New Caledonia, Noumea.

Waycott, Michelle, McKenzie, Len, Mellors, Jane E., Ellison, Joanna C., Sheaves, Marcus T., Collier, Catherine, Schwarz, Anne-Maree, Webb, Arthur, Johnson, Johanna E., and Payri, Claude E. (2011) Vulnerability of mangroves, seagrasses and intertidal flats in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 297-368.

Johnson, Johanna E., and Welch, David J. (2010) Marine fisheries management in a changing climate: a review of vulnerability and future options. Reviews in Fisheries Science, 18 (1). pp. 106-124.

Bell, Johann, Batty, Mike, Ganachaud, Alex, Gehrke, Peter, Hobday, Alistair, Hoegh-Guldberg, Ove, Johnson, Johanna, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice, Pickering, Tim, Pratchett, Morgan, Sheaves, Marcus, and Waycott, Michelle (2010) Preliminary assessment of the effects of climate change on fisheries and aquaculture in the Pacific. In: Gillett, Robert, (ed.) Fisheries in the Economies of the Pacific Island Countries and Territories. Pacific Studies Series . Asian Development Bank, Manila, Philippines, pp. 451-469.

Maynard, Jeff A., Turner, Peter, Anthony, Kenneth R.N., Baird, Andrew H., Berkelmans, Ray, Eakin, C. Mark, Johnson, Johanna, Marshall, Paul A., Packer, Gareck R., Rea, Anthony, and Willis, Bette L. (2008) ReefTemp: an interactive monitoring system for coral bleaching using high-resolution SST and improved stress predictors. Geophysical Research Letters, 35. pp. 1-5.