Matias, Ambrosio Melvin A., Popovic, Iva, Thia, Joshua A., Cooke, Ira R., Torda, Gergely, Lukoschek, Vimoksalehi, Bay, Line, Kim, Sun, and Riginos, Cynthia (2023) Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef. Evolutionary Applications, 16 (2). pp. 293-310.

Hughes, Terry P., Baird, Andrew H., Morrison, Tiffany H., and Torda, Gergely (2023) Principles for coral reef restoration in the anthropocene. One Earth, 6 (6). pp. 656-665.

Torda, Gergely, and Quigley, Kate M. (2022) Drivers of adaptive capacity in wild populations: Implications for genetic interventions. Frontiers in Marine Science, 9. 947989.

Pérez-Rosales, Gonzalo, Pichon, Michel, Rouzé, Héloïse, Villéger, Sébastien, Torda, Gergely, Bongaerts, Pim, Carlot, Jérémy, Under The Pole Consortium, , Parravicini, Valeriano, and Hédouin, Laetitia (2022) Mesophotic coral ecosystems of French Polynesia are hotspots of alpha and beta generic diversity for scleractinian assemblages. Diversity and Distributions, 28 (7). pp. 1391-1403.

Perez-Rosales, Gonzalo, Hernandez-Agreda, Alejandra, Bongaerts, Pim, Rouze, Heloise, Pichon, Michel, Carlot, Jeremy, Torda, Gergely, Under The Pole Consortium, , Parravicini, Valeriano, and Hedouin, Laetitia (2022) Mesophotic depths hide high coral cover communities in French Polynesia. Science of the Total Environment, 844. 157049.

Perez-Rosales, Gonzalo, Rouze, Heloise, Torda, Gergely, Bongaerts, Pim, Pichon, Michel, Parravicini, Valeriano, and Hedouin, Laetitia (2021) Mesophotic coral communities escape thermal coral bleaching in French Polynesia. Royal Society Open Science, 8 (11). 20139.

Bongaerts, Pim, Cooke, Ira R., Ying, Hua, Wels, Dagmar, den Haan, Stijn, Hernandez-Agreda, Alejandra, Brunner, Christopher A., Dove, Sophie, Englebert, Norbert, Eyal, Gal, Foret, Sylvain, Grinblat, Mila, Hay, Kyra B., Harii, Saki, Hayward, David C., Lin, Yu, Morana, Mihaljevi C., Moya, Aurelie, Muir, Paul, Sinniger, Frederic, Smallhorn-West, Patrick, Torda, Gergely, Ragan, Mark A., van Oppen, Madeleine J.M., and Hoegh-Guldberg, Ove (2021) Morphological stasis masks ecologically divergent coral species on tropical reefs. Current Biology, 31 (11). 2286-2298.e8.

Rouze, Heloise, Galand, Pierre E., Medina, Monica, Bongaerts, Pim, Pichon, Michel, Perez-Rosales, Gonzalo, Torda, Gergely, Moya, Aurelie, Raina, Jean-Baptiste, Hedouin, Laetitia, and UNSPECIFIED (2021) Symbiotic associations of the deepest recorded photosynthetic scleractinian coral (172 m depth). ISME Journal: multidisciplinary journal of microbial ecology, 15 (5). pp. 1564-1568.

Quigley, Kate M., Alvarez Roa, Carlos, Torda, Greg, Bourne, David G., and Willis, Bette L. (2020) Co-dynamics of Symbiodiniaceae and bacterial populations during the first year of symbiosis with Acropora tenuis juveniles. MicrobiologyOpen, 9 (2). e959.

Guibert, Isis, Lecellier, Gael, Torda, Gergely, Pochon, Xavier, and Berteaux-Lecellier, Véronique (2020) Metabarcoding reveals distinct microbiotypes in the giant clam Tridacna maxima. Microbiome, 8. 57.

Epstein, Hannah E., Smith, Hillary A., Torda, Gergely, and van Oppen, Madeleine J. H. (2019) Microbiome engineering: enhancing climate resilience in corals. Frontiers in Ecology and the Environment, 17 (2). pp. 100-108.

Hughes, Terry P., Kerry, James T., Connolly, Sean R., Baird, Andrew H., Eakin, C. Mark, Heron, Scott F., Hoey, Andrew S., Hoogenboom, Mia O., Jacobson, Mizue, Liu, Gang, Pratchett, Morgan S., Skirving, William, and Torda, Gergely (2019) Ecological memory modifies the cumulative impact of recurrent climate extremes. Nature Climate Change, 9 (1). pp. 40-44.

Hughes, Terry P., Kerry, James T., Baird, Andrew H., Connolly, Sean R., Chase, Tory J., Dietzel, Andreas, Hill, Tessa, Hoey, Andrew S., Hoogenboom, Mia O., Jacobson, Mizue, Kerswell, Ailsa, Madin, Joshua S., Mieog, Abbie, Paley, Allison S., Pratchett, Morgan S., Torda, Gergely, and Woods, Rachael M. (2019) Global warming impairs stock-recruitment dynamics of corals. Nature, 568 (7752). pp. 387-401.

Smith, Hillary A., Moya, Aurelie, Cantin, Neal E., van Oppen, Madeleine J.H., and Torda, Gergely (2019) Observations of simultaneous sperm release and larval planulation suggest reproductive assurance in the coral Pocillopora acuta. Frontiers in Marine Science, 6. 362.

Epstein, Hannah E., Torda, Gergely, Munday, Philip L., and van Oppen, Madeleine J.H. (2019) Parental and early life stage environments drive establishment of bacterial and dinoflagellate communities in a common coral. ISME Journal: multidisciplinary journal of microbial ecology, 13 (6). pp. 1635-1638.

Epstein, Hannah E., Torda, Gergely, and van Oppen, Madeleine J.H. (2019) Relative stability of the Pocillopora acuta microbiome throughout a thermal stress event. Coral Reefs, 38 (2). pp. 373-386.

Epstein, Hannah E., Smith, Hillary A., Cantin, Neal E., Mocellin, Veronique J. L., Torda, Gergely, and van Oppen, Madeleine J. H. (2019) Temporal variation in the microbiome of Acropora coral species does not reflect seasonality. Frontiers In Microbiology, 10. 1775.

Rouzé, Héloïse, Lecellier, Gaël, Pochon, Xavier, Torda, Gergely, and Berteaux-Lecellier, Véronique (2019) Unique quantitative Symbiodiniaceae signature of coral colonies revealed through spatio-temporal survey in Moorea. Scientific Reports, 9. 7921.

Torda, Gergely, Sambrook, Katie, Cross, Peter, Sato, Yui, Bourne, David G., Lukoschek, Vimoksalehi, Hill, Tessa, Torras Jorda, Georgina, Moya, Aurelie, and Willis, Bette L. (2018) Decadal erosion of coral assemblages by multiple disturbances in the Palm Islands, central Great Barrier Reef. Scientific Reports, 8. 11885. pp. 1-10.

Hughes, Terry P., Kerry, James T., Baird, Andrew H., Connolly, Sean R., Dietzel, Andreas, Eakin, C. Mark, Heron, Scott F., Hoey, Andrew S., Hoogenboom, Mia O., Liu, Gang, McWilliam, Michael J., Pears, Rachel J., Pratchett, Morgan S., Skirving, William J., Stella, Jessica S., and Torda, Gergely (2018) Global warming transforms coral reef assemblages. Nature, 556 (7702). pp. 492-496.

Hughes, Terry P., Anderson, Kristen D., Connolly, Sean R., Heron, Scott F., Kerry, James T., Lough, Janice M., Baird, Andrew H., Baum, Julia, Berumen, Michael L., Bridge, Tom C., Claar, Danielle C., Eakin, C. Mark, Gilmour, James P., Graham, Nicholas A.J., Harrison, Hugo, Hobbs, Jean-Paul A., Hoey, Andrew S., Hoogenboom, Mia, Lowe, Ryan J., McCulloch, Malcolm T., Pandolfi, John M., Pratchett, Morgan, Schoepf, Verena, Torda, Gergely, and Wilson, Shaun K. (2018) Spatial and temporal patterns of mass bleaching of corals in the Anthropocene. Science, 359 (6371). pp. 80-83.

Quigley, Kate M., Torda, Gergely, and Bay, Line K. (2018) The use of larvae or recruits in coral restoration initiatives: Symbiodinium acquisition does not differ between coral life stages in the wild. Restoration Ecology, 26 (3). pp. 422-425.

Smith, Hillary, Epstein, Hannah, and Torda, Gergely (2017) The molecular basis of differential morphology and bleaching thresholds in two morphs of the coral Pocillopora acuta. Scientific Reports, 7 (1). 10066.

Pollock, F. Joseph, Katz, Sefano M., van de Water, Jeroen A.J.M., Davies, Sarah W., Hein, Margaux, Torda, Gergely, Matz, Mikhail V., Beltran, Victor H., Buerger, Patrick, Puill-Stephan, Eneour, Abrego, David, Bourne, David G., and Willis, Bette L. (2017) Coral larvae for restoration and research: a large-scale method for rearing Acropora millepora larvae, inducing settlement, and establishing symbiosis. PeerJ, 5. e3732.

Hughes, Terry P., Kerry, James T., Álvarez-Noriega, Mariana, Alvarez-Romero, Jorge G., Anderson, Kristen D., Baird, Andrew, Babcock, Russell C., Beger, Maria, Bellwood, David, Berkelmans, Ray, Bridge, Tom C., Butler, Ian R., Byrne, Maria, Cantin, Neal E., Comeau, Steeve, Connolly, Sean, Cumming, Graeme S., Dalton, Steven J., Diaz-Pulido, Guillermo, Eakin, C. Mark, Figueira, Will F., Gilmour, James P., Harrison, Hugo B., Heron, Scott F., Hoey, Andrew S., Hobbs, Jean-Paul A., Hoogenboom, Mia O., Kennedy, Emma V., Kuo, Chao-Yang, Lough, Janice M., Lowe, Ryan J., Liu, Gang, McCulloch, Malcolm T., Malcolm, Hamish A., McWilliam, Michael J., Pandolfi, John M., Pears, Rachel J., Pratchett, Morgan S., Schoepf, Verena, Simpson, Tristan, Skirving, William J., Sommer, Brigitte, Torda, Gergely, Wachenfeld, David R., Willis, Bette L., and Wilson, Shaun (2017) Global warming and recurrent mass bleaching of corals. Nature, 543 (7645). pp. 373-377.

Torda, Gergely, Donelson, Jennifer M., Aranda, Manuel, Barshis, Daniel J., Bay, Line, Berumen, Michael L., Bourne, David G., Cantin, Neal, Foret, Sylvain, Matz, Mikhail, Miller, David J., Moya, Aurelie, Putnam, Hollie M., Ravasi, Timothy, van Oppen, Madeleine J.H., Vega Thurber, Rebecca, Vidal-Dupiol, Jeremie, Voolstra, Christian R., Watson, Sue-Ann, Whitelaw, Emma, Willis, Bette L., and Munday, Philip L. (2017) Rapid adaptive responses to climate change in corals. Nature Climate Change, 7. pp. 627-636.

van Oppen, Madeleine J.H., Gates, Ruth D., Blackall, Linda L., Cantin, Neal, Chakravarti, Leela J., Chan, Wing Y., Cormick, Craig, Crean, Angela, Damjanovic, Katarina, Epstein, Hannah, Harrison, Peter L., Jones, Thomas A., Miller, Margaret, Pears, Rachel J., Peplow, Lesa M., Raftos, David A., Schaffelke, Britta, Stewart, Kirsten, Torda, Gergely, Wachenfeld, David, Weeks, Andrew R., and Putnam, Hollie M. (2017) Shifting paradigms in restoration of the world's coral reefs. Global Change Biology, 23 (9). pp. 3437-3448.

Pollock, F. Joseph, Wada, Naoisha, Torda, Gergely, Willis, Bette L., and Bourne, David G. (2017) White syndrome-affected corals have a distinct microbiome at disease lesion fronts. Applied and Environmental Microbiology, 83 (2). e02799-16. pp. 1-15.

Moya, Aurelie, Howes, Ella L., Lacoue-Labarthe, Thomas, Foret, Sylvain, Hanna, Bishoy, Medina, Mónica, Munday, Philip L., Ong, Jue-Sheng, Teyssié, Jean-Louis, Torda, Gergely, Watson, Sue-Ann, Miller, David J., Bijma, Jelle, and Gattuso, Jean-Pierre (2016) Near-future pH conditions severely impact calcification, metabolism and the nervous system in the pteropod Heliconoides inflatus. Global Change Biology, 22 (12). pp. 3888-3900.

Ainsworth, Tracy D., Krause, Lutz, Bridge, Thomas, Torda, Gergely, Raina, Jean-Baptiste, Zakrzewski, Martha, Gates, Ruth D., Padilla-Gamino, Jacqueline L., Spalding, Heather L., Smith, Celia, Woolsey, Erika S., Bourne, David G., Bongaerts, Pim, Hoegh-Guldberg, Ove, and Leggat, Bill (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 9. pp. 2261-2274.

Torda, G., Lundgren, P., Willis, B.L., and van Oppen, M.J.H. (2013) Genetic assignment of recruits reveals short- and long-distance larval dispersal in Pocillopora damicornis on the Great Barrier Reef. Molecular Ecology, 22 (23). pp. 5821-5834.

Torda, G., Lundgren, P., Willis, B. L., and van Oppen, M.J.H. (2013) Revisiting the connectivity puzzle of the common coral Pocillopora damicornis. Molecular Ecology, 22 (23). pp. 5805-5820.

Lukoschek, Vimoksalehi, Cross, Peter, Torda, Gergely, Zimmerman, Rachel, and Willis, Bette L. (2013) The importance of coral larval recruitment for the recovery of reefs impacted by Cyclone Yasi in the central Great Barrier Reef. PLoS ONE, 8 (6). e65363. pp. 1-11.

Torda, Gergely, Schmidt-Roach, Sebastian, Peplow, Lesa M., Lundgren, Petra, and van Oppen, Madeleine J.H. (2013) A rapid genetic assay for the identification of the most common Pocillopora damicornis genetic lineages on the Great Barrier Reef. PLoS One, 8 (3). e58447. pp. 1-5.

Torda, Gergely (2012) Genetic assessment of population structure and the origin of recruits in brooding corals: understanding population connectivity on the Great Barrier Reef on various timescales. PhD thesis, James Cook University.

Torda, Gergely, Suárez, Pedro López, and Jurado, Luís Felipe López (2010) First records of Fraser’s Dolphin Lagenodelphis hosei for the Cape Verde Islands. Zoologia Caboverdiana, 1 (1). pp. 71-73.

Hazevoet, Cornelis J., Monteiro, Vanda, López, Pedro, Varo, Nuria, Torda, Gergely, Berrow, Simon, and Gravanita, Barbara (2010) Recent data on whales and dolphins (Mammalia: Cetacea) from the Cape Verde Islands, including records of four taxa new to the archipelago. Zoologia Caboverdiana, 1 (2). pp. 75-99.