Items where Subject is "06 BIOLOGICAL SCIENCES > 0605 Microbiology > 060504 Microbial Ecology"

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Article

Guernier, Vanina, Lagadec, Erwan, Cordonin, Colette, Le Minter, Gildas, Gomard, Yann, Pagès, Frédéric, Jaffar-Bandjee, Marie-Christine, Michault, Alain, Tortosa, Pablo, and Dellagi, Koussay (2016) Human leptospirosis on Reunion Island, Indian Ocean: are rodents the (only) ones to blame? PLoS Neglected Tropical Diseases, 10 (6). pp. 1-19.

Guernier, Vanina, Milinovich, Gabriel J., Bezerra Santos, Marcos Antonio, Haworth, Mark, Coleman, Glen, and Soares Magalhaes, Ricardo J. (2016) Use of big data in the surveillance of veterinary diseases: early detection of tick paralysis in companion animals. Parasites & Vectors, 9. pp. 1-10.

Wakelin, S.A., Gerard, E., van Koten, C., Banabas, M., O'Callaghan, M., and Nelson, P.N. (2016) Soil physicochemical properties impact more strongly on bacteria and fungi than conversion of grassland to oil palm. Pedobiologia, 59 (3). pp. 83-91.

Ainsworth, Tracy D., and Gates, Ruth D. (2016) Corals' microbial sentinels: the coral microbiome will be key to future reef health. Science, 352 (6293). pp. 1518-1519.

Wada, Naohisa, Pollock, Frederic J., Willis, Bette L., Ainsworth, Tracy, Mano, Nobuhiro, and Bourne, David G. (2016) In situ visualization of bacterial populations in coral tissues: pitfalls and solutions. PeerJ, 4.

Correa, Adrienne M.S., Ainsworth, Tracy D., Rosales, Stephanie M., Thurber, Andrew R., Butler, Christopher R., and Thurber, Rebecca L. Vega (2016) Viral outbreak in corals associated with an in situ bleaching event: atypical herpes-like viruses and a new megavirus infecting Symbiodinium. Frontiers in Microbiology, 7. pp. 1-14.

Hernandez-Agreda, Alejandra, Leggat, William, Bongaerts, Pim, and Ainsworth, Tracy D. (2016) The microbial signature provides insight into the mechanistic basis of coral success across reef habitats. mBio, 7 (4). pp. 1-10.

Jensen, Sigmund, V. Fortunato, Sofia A., Hoffman, Friederike, Hoem, Solveig, Tore Rapp, Hans, Øvreås, Lise, Torsvik, Vigdis L., and UNSPECIFIED (2016) The relative abundance and transcriptional activity of marine sponge-associated microorganisms emphasizing groups involved in sulfur cycle. Microbial Ecology. (In Press)

Dieme, Constentin, Parola, Philippe, Guernier, Vanina, Lagadec, Erwan, Le Minter, Gildas, Balleydier, Elsa, Pagès, Frederic, Dellagi, Koussay, Tortosa, Pablo, Raoult, Didier, and Socolovschi, Cristina (2015) Rickettsia and Bartonella species in fleas from Reunion Island. American Journal of Tropical Medicine and Hygiene, 92 (3). pp. 617-619.

Casey, Jordan M, Connolly, Sean R., and Ainsworth, Tracy D. (2015) Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens. Scientific Reports, 5. pp. 1-11.

Hess, Sybille, Wenger, Amelia S., Ainsworth, Tracy D., and Rummer, Jodie L. (2015) Exposure of clownfish larvae to suspended sediment levels found on the Great Barrier Reef: impacts on gill structure and microbiome. Scientific Reports, 5. pp. 1-8.

Chidambarampadmavathy, Karthigeyan, Kartikeyan, Obulisamy P., and Heimann, Kirsten (2015) Role of copper and iron in methane oxidation and bacterial biopolymer accumulation. Engineering in Life Sciences, 15. pp. 387-399.

Ainsworth, Tracy D., Krause, Lutz, Bridge, Thomas, Torda, Gergely, Raina, Jean-Baptiste, Zakrzewski, Martha, Gates, Ruth D., Padilla-Gamino, Jacqueline L., Spalding, Heather L., Smith, Celia, Woolsey, Erika S., Bourne, David G., Bongaerts, Pim, Hoegh-Guldberg, Ove, and Leggat, Bill (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 9. pp. 2261-2274.

Lema, Kimberley A., Willis, Bette L., and Bourne, David G. (2014) Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome. Environmental Microbiology, 16 (10). pp. 3345-3359.

Guernier, Vanina, Lagadec, Erwan, LeMinter, Gildas, Licciardi, Séverine, Balleydier, Elsa, Pagès, Frédéric, Laudisoit, Anne, Dellagi, Koussay, and Tortosa, Pablo (2014) Fleas of small mammals on Reunion Island: diversity, distribution and epidemiological consequences. PLoS Neglected Tropical Diseases, 8 (9). pp. 1-10.

Daskin, Joshua H., Bell, Sara C., Schwarzkopf, Lin, and Alford, Ross A. (2014) Cool temperatures reduce antifungal activity of symbiotic bacteria of threatened amphibians: implications for disease management and patterns of decline. PLoS ONE, 9 (6). pp. 1-9.

Agha, Ramsy, Lezcano, María Ángeles, Labrador, María del Mar, Cirés, Samuel, and Quesada, Antonio (2014) Seasonal dynamics and sedimentation patterns of Microcystis oligopeptide-based chemotypes reveal subpopulations with different ecological traits. Limnology and Oceanography, 59 (3). pp. 861-871.

Kleinteich, J., Hildebrand, F., Wood, S.A., Cirés, Samuel, Agha, R., Quesada, A., Pearce, D.A., Convey, P., Küpper, F.C., and Dietrich, D.R. (2014) Diversity of toxin and non-toxin containing cyanobacterial mats of meltwater ponds on the Antarctic Peninsula: a pyrosequencing approach. Antarctic Science, 26 (5). pp. 521-532.

Lema, Kimberley A., Bourne, David G., and Willis, Bette L. (2014) Onset and establishment of diazotrophs and other bacterial associates in the early life history stages of the coral Acropora millepora. Molecular Ecology, 23 (19). pp. 4682-4695.

Garren, Melissa, Son, Kwangmin, Raina, Jean-Baptiste, Rusconi, Roberto, Menolascina, Filippo, Shapiro, Orr H., Tout, Jessica, Bourne, David G., Seymour, Justin R., and Stocker, Roman (2014) A bacterial pathogen uses dimethylsulfoniopropionate as a cue to target heat-stressed corals. ISME Journal, 8. pp. 999-1007.

Grand, Alexandra, Pratchett, Morgan, and Rivera-Posada, Jairo (2014) The immune response of Acanthaster planci to oxbile injections and antibiotic treatment. Journal of Marine Biology, 2014. pp. 1-11.

Bell, Sara C., Alford, Ross A., Garland, Stephen, Padilla, Gabriel, and Thomas, Annette D. (2013) Screening bacterial metabolites for inhibitory effects against Batrachochytrium dendrobatidis using a spectrophotometric assay. Diseases of Aquatic Organisms, 103 (1). pp. 77-85.

Bletz, Molly C., Louden, Andrew H., Becker, Matthew H., Bell, Sara C., Woodhams, Douglas C., Minbiole, Kevin P.C., and Harris, Reid N. (2013) Mitigating amphibian chytridiomycosis with bioaugmentation: characteristics of effective probiotics and strategies for their selection and use. Ecology Letters, 16 (6). pp. 807-820.

Ceh, Janja, Kilburn, Matt R., Cliff, John B., Raina, Jean-Baptiste, van Keulen, Mike, and Bourne, David G. (2013) Nutrient cycling in early coral life stages: Pocillopora damicornis larvae provide their algal symbiont (Symbiodinium) with nitrogen acquired from bacterial associates. Ecology and Evolution, 3 (8). pp. 2393-2400.

Nicolet, K.J., Hoogenboom, M.O., Gardiner, N.M., Pratchett, M.S., and Willis, B.L. (2013) The corallivorous invertebrate Drupella aids in transmission of brown band disease on the Great Barrier Reef. Coral Reefs, 32 (2). pp. 585-595.

Roberts, Alexandra A., Schultz, Andrew W., Kersten, Roland D., Dorrestein, Pieter C., and Moore, Bradley S. (2012) Iron acquisition in the marine actinomycete genus Salinispora is controlled by the desferrioxamine family of siderophores. FEMS Microbiology Letters, 335 (2). pp. 95-103.

Gehringer, Michelle M., Adler, Lewis, Roberts, Alexandra A., Moffitt, Michelle C., Mihali, Troco K., Mills, Toby J.T., Fieker, Claus, and Neilan, Brett A. (2012) Nodularin, a cyanobacterial toxin, is synthesized in planta by symbiotic Nostoc sp. ISME Journal, 6 (10). pp. 1834-1847.

Lagadec, Erwan, Gomard, Yann, Guernier, Vanina, Dietrich, Muriel, Pascalis, Hervé, Temmam, Sarah, Ramasindrazana, Beza, Goodman, Steven M., Tortosa, Pablo, and Dellagi, Koussay (2012) Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros. Emerging Infectious Diseases, 18 (10). pp. 1696-1698.

Kosch, Tiffany A., Morales, Victor, and Summers, Kyle (2012) Batrachochytrium dendrobatidis in Peru. Herpetological Review, 43 (2). pp. 288-293.

Baker, Anthony, Tahani, Donald, Gardiner, Christopher, Bristow, Keith L., Greenhill, Andrew R., and Warner, Jeffrey (2011) Groundwater seeps facilitate exposure to Burkholderia pseudomallei. Applied and Environmental Microbiology, 77 (20). pp. 7243-7246.

Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.

Baker, Anthony, Pearson, Talima, Price, Erin P., Dale, Julia, Keim, Paul, Hornstra, Heidie, Greenhill, Andrew, Padilla, Gabriel, and Warner, Jeffrey (2011) Molecular phylogeny of Burkholderia pseudomallei from a remote region of Papua New Guinea. PLoS ONE, 6 (3). pp. 1-6.

Bourne, David G, Muirhead, Andrew, and Sato, Yui (2011) Changes in sulfate-reducing bacterial populations during the onset of black band disease. ISME Journal: multidisciplinary journal of microbial ecology, 5 (3). 559- 564.

Dale, Julia, Price, Erin P., Hornstra, Heidie, Busch, Joseph D., Mayo, Mark, Godoy, Daniel, Wuthiekanun, Vanaporn, Baker, Anthony, Foster, Jeffrey T., Wagner, David M., Tuanyok, Apichai, Warner, Jeffrey, Spratt, Brian G., Peacock, Sharon J, Currie, Bart J., Keim, Paul, and Pearson, Talima (2011) Epidemiological Tracking and Population Assignment of the Non-Clonal Bacterium, Burkholderia pseudomallei. PLoS Neglected Tropical Disease, 5 (12). pp. 1-17.

Shipton, W.A., Baker, A., Blaney, B.J., Horwood, P.F., Warner, J.M., Pelowa, D., and Greenhill, A.R. (2011) Nitrogen fixation associated with sago (Metroxylon sagu) and some implications. Letters in Applied Microbiology, 52 (1). pp. 56-61.

Luter, Heidi M., Whalan, Steve, and Webster, Nicole S. (2010) Exploring the role of microorganisms in the disease-like syndrome affecting the sponge Ianthella basta. Applied and Environmental Microbiology, 76 (17). pp. 5736-5744.

Corkeron, M.L., Norton, R., and Nelson, P.N. (2010) Spatial analysis of melioidosis distribution in a suburban area. Epidemiology and Infection, 138 (9). pp. 1346-1352.

Webster, Nicole S., Taylor, Michael W., Behnam, Faris, Lücker, Sebastian, Rattei, Thomas, Whalan, Stephen, Horn, Matthias, and Wagner, Michael (2010) Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environmental Microbiology, 12 (8). pp. 2070-2082.

Glas, Martin S., Motti, Cherie A., Negri, Andrew P., Sato, Yui, Froscio, Suzanne, Humpage, Andrew R., Krock, Bernd, Cembella, Allan, and Bourne, David G (2010) Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef. FEMS Microbiology Ecology, 73 (1). pp. 43-54.

Littman, Raechel A., Bourne, David G., and Willis, Bette L. (2010) Responses of coral-associated bacterial communities to heat stress differ with Symbiodinium type on the same coral host. Molecular Ecology, 19 (9). pp. 1978-1990.

Ainsworth, Tracy D., Thurber, Rebecca Vega, and Gates, Ruth D. (2010) The future of coral reefs: a microbial perspective. Trends in Ecology and Evolution, 25 (4). pp. 233-240.

James, Timothy Y., Litvintseva, Anastasia P., Vilgalys, Rytas, Morgan, Jess A.T., Taylor, John W., Fisher, Matthew C., Berger, Lee, Weldon, Ché, du Preez, Louis, and Longcore, Joyce E. (2009) Rapid global expansion of the fungal disease chytridiomycosis into declining and healthy amphibian populations. PLoS Pathogens, 5 (5). - .

Olson , N.D., Ainsworth, T.D., Gates, R.D., and Takabayashi, M. (2009) Diazotrophic bacteria associated with Hawaiian Montipora corals: diversity and abundance in correlation with symbiotic dinoflagellates. Journal of Experimental Marine Biology and Ecology, 371 (2). pp. 140-146.

Ward, Rebekah J., Clements, Kendall D., Choat, John Howard, and Angert, Esther R. (2009) Cytology of terminally differentiated Epulopiscium mother cells. DNA and Cell Biology, 28 (2). pp. 57-64.

Ainsworth, T.D., and Hoegh-Guldberg, O. (2009) Bacterial communities closely associated with coral tissues vary under experimental and natural reef conditions and thermal stress. Aquatic Biology, 4 (3). pp. 289-296.

Adams, Lisa M., Cumbo, Vivian, and Takabayashi, Misaki (2009) Exposure to sediment enhances primary acquisition of Symbiodinium by asymbiotic coral larvae. Marine Ecology Progress Series, 377. pp. 179-156.

Steger, Doris, Ettinger-Epstein, Piers, Whalan, Stephen, Hentschel, Ute, de Nys, Rocky, Wagner, Michael, and Taylor, Michael W. (2008) Diversity and mode of transmission of ammonia-oxidizing archaea in marine sponges. Environmental Microbiology, 10 (4). pp. 1087-1094.

Ainsworth, T.D., Fine, M., Roff, G., and Hoegh-Guldberg, O. (2008) Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica. ISME Journal: multidisciplinary journal of microbial ecology, 4 (2). pp. 67-73.

Schlick-Steiner, Birgit C., Steiner, Florian M., Konrad, Heino, Seifert, Bernhard, Christian, Erhard, Moder, Karl, Stauffer, Christian, and Crozier, Ross H. (2008) Specificity and transmission mosaic of ant nest-wall fungi. National Academy of Sciences. Proceedings, 105 (3). pp. 940-944.

Skindersoe, Mette Elena, Ettinger-Epstein, Piers, Rasmussen, Thomas Bovbjerg, Bjarnsholt, Thomas, de Nys, Rocky, and Givskov, Michael (2008) Quorum sensing antagonism from marine organisms. Marine Biotechnology, 10 (1). pp. 56-63.

Bourne, David, Iida, Yuki, Uthicke, Sven, and Smith-Keune, Carolyn (2008) Changes in coral-associated microbial communities during a bleaching event. ISME Journal: multidisciplinary journal of microbial ecology, 2. pp. 350-363.

Ainsworth, T.D., Kramasky-Winter, E., Loya, Y., Hoegh-Guldberg, O., and Fine, M. (2007) Coral disease diagnostics: what's between a plague and a band? Applied and Environmental Microbiology, 73 (3). pp. 981-992.

Dove, Sophie, Ortiz, Juan Carlos, Enriquez, Susana, Fine, Maoz, Fisher, Paul, Iglesias-Prieto, Roberto, Thornhill, Dan, and Hoegh-Guldberg, Ove (2006) Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress. Limnology and Oceanography, 51 (2). pp. 1149-1158.

Fine, M., Roff, G., Ainsworth, T.D., and Hoegh-Guldberg, O. (2006) Phototrophic microendoliths bloom during coral "white syndrome". Coral Reefs, 25 (4). pp. 577-581.

Marquis, C.P., Baird, A.H., de Nys, R., Holmström, C., and Koziumi, N. (2005) An evaluation of the antimicrobial properties of the eggs of 11 species of scleractinian corals. Coral Reefs, 24 (2). pp. 248-253.

Taylor, Michael W., Schupp, Peter J., Baillie, Harriet J., Charlton, Timothy S., de Nys, Rocky, Kjelleberg, Staffan, and Steinberg, Peter D. (2004) Evidence for Acyl Homoserine Lactone signal production in bacteria associated with marine sponges. Applied and Environmental Microbiology, 70 (7). pp. 4387-4389.

Dove, Sophie (2004) Scleractinian corals with photoprotective host pigments are hypersensitive to thermal bleaching. Marine Ecology Progress Series, 272. pp. 99-116.

Johnson, Megan L., and Speare, Richard (2003) Survival of Batrachochytrium dendrobatidis in water: quarantine and disease control implications. Emerging Infectious Diseases, 9 (8). pp. 922-925.

Conference Item

Macreadie, Peter, York, Paul, Rasheed, Michael, Bryant, Catherine, Ricart, Aurora, Nielsen, Daniel, Fontes, Maria, Atwood, Tricia, Seymour, Justin, Petrou, Katherina, Kelleway, Jeffrey, Thomson, Alexandra, Trevathan-Tackett, Stacey, Connolly, Rod, and Ralph, Peter (2015) Hot spots and hot moments in seagrass 'blue carbon' science. In: Abstracts from 52nd Australian Marine Science Association Conference, p. 206. From: AMSA 2015: Australian Marine Science Association: Estuaries to Oceans, 5-9 July 2015, Geelong, Victoria.

Thesis

Casey, Jordan Marie (2015) The role of territorial grazers in coral reef trophic dynamics from microbes to apex predators. PhD thesis, James Cook University.

Freckelton, Marnie Louise (2015) Quorum sensing in Australian soft corals. PhD thesis, James Cook University.

Ogawa, Daisie R. (2014) The effects of climate change on the Acropora aspera holobiont. PhD thesis, James Cook University.

Raina, Jean-Baptiste (2013) Production and fate of dimethylsulfoniopropionate (DMSP) in reef-building corals and its integral role in coral health. PhD thesis, James Cook University.

Bell, Sara Christiane (2012) The role of cutaneous bacteria in resistance of Australian tropical rainforest frogs to the amphibian chytrid fungus Batrachochytrium dendrobatidis. PhD thesis, James Cook University.

Sato, Yui (2012) Ecology and microbiology of black band disease: new insights into the etiology of an old coral disease. PhD thesis, James Cook University.

Luter, Heidi M. (2011) The effects of disease and stress on the microbial community of the sponge Ianthella basta. PhD thesis, James Cook University.

Sussman, Meir (2009) Coral disease pathogens of the Indo-Pacific Ocean. PhD thesis, James Cook University.

Rowley, Jodi J.L. (2006) Why does Chytridiomycosis drive some frog populations to extinction and not others? : the effects of interspecific variation in host behaviour. PhD thesis, James Cook University.

Scardino, Andrew J. (2006) Biomimetic fouling control. PhD thesis, James Cook University.

Boyett, Holly Virginia (2006) The ecology and microbiology of black band disease and brown band syndrome on the Great Barrier Reef. Masters (Research) thesis, James Cook University.

Carter, David O. (2005) Forensic taphonomy: processes associated with cadaver decomposition in soil. PhD thesis, James Cook University.

Woodhams, Douglas Craig (2003) The ecology of chytridiomycosis, an emerging infectious disease of Australian rainforest frogs. PhD thesis, James Cook University.

Hendrarto, Ignatius Boedi (1992) Distribution and abundance of benthic diatoms in a tropical mangrove forest and effects of grazing on them by Telescopium telescopium (Linnaeus, 1758). PhD thesis, James Cook University of North Queensland.

Ludvianto, Bayu (1992) A study on the biology of Osangularia cf. venusta (Brady): an epiphytic foraminifera on the intertidal seagrass Halodule uninervis in Shelly Bay, Townsville, North Queensland. PhD thesis, James Cook University of North Queensland.

This list was generated on Sat Dec 3 22:48:45 2016 EST.