Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Castro-Sanguino, Carolina, Ortiz, Juan Carlos, Thompson, Angus, Wolff, Nicholas H., Ferrari, Renata, Robson, Barbara, Magno-Canto, Marites M., Puotinen, Marji, Fabricius, Katharina E., and Uthicke, Sven (2021) Reef state and performance as indicators of cumulative impacts on coral reefs. Ecological Indicators, 123. 107335.

Matthews, Samuel A., Mellin, Camille, MacNeil, Aaron, Heron, Scott F., Skirving, William, Puotinen, Marji, Devlin, Michelle J., and Pratchett, Morgan (2019) High-resolution characterization of the abiotic environment and disturbance regimes on the Great Barrier Reef, 1985–2017. Ecology, 100 (2). e02574.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Mantel, Philippa, Puotinen, Marji, Petus, Caroline, Russ, Garry R., and Williamson, David H. (2019) Long-term dynamics and drivers of coral and macroalgal cover on inshore reefs of the Great Barrier Reef Marine Park. Ecological Applications. e02008.

Darling, Emily S., McClanahan, Tim R., Maina, Joseph, Gurney, Georgina G., Graham, Nicholas A.J., Januchowski-hartley, Fraser, Cinner, Joshua E., Mora, Camillo, Hicks, Christina C., Maire, Eva, Puotinen, Marji, Skirving, William J., Adjeroud, Mehdi, Ahmadia, Gabby, Arthur, Rohan, Bauman, Andrew G., Beger, Maria, Berumen, Michael L., Bigot, Lionel, Bouwmeester, Jessica, Brenier, Ambroise, Bridge, Thomas, Brown, Eric, Campbell, Stuart J., Cannon, Sara, Cauvin, Bruce, Chen, Chaolu Allen, Claudet, Joachim, Denis, Vianney, Donner, Simon, Estradivari, , Fadli, Nur, Feary, David A., Fenner, Douglas, Fox, Helen, Franklin, Erik C., Friedlander, Alan, Gilmour, James, Goiran, Claire, Guest, James, Hobbs, Jean-Paul A., Hoey, Andrew S., Houk, Peter, Johnson, Steve, Jupiter, Stacy D., Kayal, Mohsen, Kuo, Chao-Yang, Lamb, Joleah, Lee, Michelle A.C., Low, Jeffrey, Muthiga, Nyawira, Muttaqin, Efin, Nand, Yashika, Nash, Kirsty L., Nedlic, Osamu, Pandolfi, John M., Pardede, Shinta, Patankar, Vardhan, Penin, Lucie, Ribas-Deulofeu, Lauriane, Richards, Zoe, Roberts, T. Edward, Rodgers, Ku’ulei S., Safuan, Che Din Mohd, Sala, Enric, Shedrawi, George, Sin, Tsai Min, Smallhorn-West, Patrick, Smith, Jennifer E., Sommer, Brigitte, Steinberg, Peter, Sutthacheep, Makamas, Tan, Chun Hong James, Williams, Gareth J., Wilson, Shaun, Yeemin, Thamasak, Bruno, John F., Fortin, Marie-Josée, Krkosek, Martin, and Mouillot, David (2019) Social–environmental drivers inform strategic management of coral reefs in the Anthropocene. Nature Ecology & Evolution, 3. pp. 1341-1350.

Mellin, Camille, Matthews, Samuel, Anthony, Kenneth R.N., Brown, Stuart C., Caley, M. Julian, Johns, Kerryn A., Osborne, Kate, Puotinen, Marjetta, Thompson, Angus, Wolff, Nicholas H., Fordham, Damien A., and MacNeil, M. Aaron (2019) Spatial resilience of the Great Barrier Reef under cumulative disturbance impacts. Global Change Biology, 25 (7). pp. 2431-2445.

Zinke, Jens, Gilmour, James P., Fisher, Rebecca, Puotinen, Marji, Maina, Joseph, Darling, Emily, Stat, Michael, Richards, Zoe T., McClanahan, Timothy R., Beger, Maria, Moore, Cordelia, Graham, Nicholas A.J., Feng, Ming, Hobbs, Jean-Paul A., Evans, Scott N., Field, Stuart, Shedrawi, George, Babcock, Russ C., and Wilson, Shaun K. (2018) Gradients of disturbance and environmental conditions shape coral community structure for south-eastern Indian Ocean reefs. Diversity and Distributions, 24 (5). pp. 605-620.

Beyer, Hawthorne L., Kennedy, Emma V., Beger, Maria, Chen, Chaolun Allen, Cinner, Joshua E., Darling, Emily S., Eakin, C. Mark, Gates, Ruth D., Heron, Scott F., Knowlton, Nancy, Obura, David O., Palumbi, Stephen R., Possingham, Hugh P., Puotinen, Marji, Runting, Rebecca K., Skirving, William J., Spalding, Mark, Wilson, Kerrie A., Wood, Sally, Veron, John, and Hoegh-Guldberg, Ove (2018) Risk-sensitive planning for conserving coral reefs under rapid climate change. Conservation Letters, 11 (6). e12587.

Maynard, Jeffrey A., Beeden, Roger, Puotinen, Marjetta, Johnson, Johanna E., Marshall, Paul, van Hooidonk, Ruben, Heron, Scott F., Devlin, Michelle, Lawrey, Eric, Dryden, Jen, Ban, Natalie, Wachenfeld, David, and Planes, Serge (2016) Great Barrier Reef no-take areas include a range of disturbance regimes. Conservation Letters, 9 (3). pp. 191-199.

Dechnik, Belinda, Webster, Jody M., Nothdurft, Luke, Webb, Gregory E., Zhao, Jian-xin, Duce, Stephanie, Braga, Juan C., Harris, Daniel L., Vila-Concejo, Ana, and Puotinen, Marji (2016) Influence of hydrodynamic energy on Holocene reef flat accretion, Great Barrier Reef. Quaternary Research, 85. pp. 44-53.

Maynard, Jeffrey, van Hooidonk, Ruben, Eakin, C. Mark, Puotinen, Marjetta, Garren, Melissa, Williams, Gareth, Heron, Scott F., Lamb, Joleah, Weil, Ernesto, Willis, Bette, and Harvell, C. Drew (2015) Projections of climate conditions that increase coral disease susceptibility and pathogen abundance and virulence. Nature Climate Change, 5 (7). pp. 688-695.

Beeden, Roger, Maynard, Jeffrey, Puotinen, Marjetta, Marshall, Paul, Dryden, Jen, Goldberg, Jeremy, and Williams, Gareth (2015) Impacts and recovery from severe tropical cyclone Yasi on the Great Barrier Reef. PLoS ONE, 10. e0121272.

Johnson, Johanna, Maynard, Jeffrey, Devlin, Michelle, Wilkinson, Scott, Anthony, Ken, Yorkston, Hugh, Heron, Scott, Puotinen, Marji, and Van Hooidonk, Ruben (2013) 2013 scientific consensus statement: resilience of Great Barrier Reef marine ecosystems and drivers of change. Report. CSIRO Publishing, Queensland, Australia.

Fabricius, Katharina E., De'Ath, Glenn, Puotinen, Marji Lee, Done, Terry, Cooper, Timothy F., and Burgess, Scott C. (2008) Disturbance gradients on inshore and offshore coral reefs caused by a severe tropical cyclone. Limnology and Oceanography, 53 (2). pp. 690-704.

Tum, S., Puotinen, M.L., Skerratt, L.F., Chan, B., and Sothoeun, S. (2007) Validation of a geographic information system model for mapping the risk of fasciolosis in cattle and buffaloes in Cambodia. Veterinary Parasitology, 143 (3-4). pp. 364-367.

Puotinen, M.L. (2007) Modelling the risk of cyclone wave damage to coral reefs using GIS: a case study of the Great Barrier Reef, 1969–2003. International Journal of Geographical Information Science, 21 (1). pp. 97-120.

Puotinen, M.L. (2004) Tropical cyclones in the Great Barrier Reef, Australia, 1910-1999: first step towards charterising the disturbance regime. Australian Geographical Studies, 42 (3). pp. 381-395.

Tum, S., Puotinen, M.L., and Copeman, D.B. (2004) A geographic information systems model for mapping risk of fasciolosis in cattle and buffaloes in Cambodia. Veterinary Parasitology, 122 (2). pp. 141-149.

Puotinen, Marji (2004) Mapping tropical cyclone disturbance of the Great Barrier Reef. The Globe: journal of the Australian Map Circle, 55. pp. 31-41.

Puotinen, Marjetta Lee (2004) Tropical cyclone impacts on coral reef communities: modelling the disturbance regime in the Great Barrier Reef region, 1969-2003. PhD thesis, James Cook University.

Chilvers, B. Louise, Corkeron, Peter J., and Puotinen, Marji L. (2003) Influence of trawling on the behaviour and spatial distribution of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Moreton Bay, Australia. Canadian Journal of Zoology, 81 (12). pp. 1947-1955.

Puotinen, M. (2003) Modelling tropical cyclone disturbance of the Great Barrier Reef using GIS. In: Preceedings of the International Congress on Modelling and Simulation (MODISM 2003). pp. 672-677. From: MODSIM 2003 - International Congress on Modelling and Simulation, 14-17 July 2003, Townsville, QLD, Australia.

Bauer, Irmgard L., and Puotinen, Marji (2002) Geographic information systems and travel health. Journal of Travel Medicine, 9 (6). pp. 308-314.