Publications by: Ashley J. Waardenberg

Also publishes as (Ashley Waardenberg, The Bovine Genome Sequencing and Analysis Consortium)

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Number of items: 12.

Engholm-Keller, Kasper, Waardenberg, Ashley J., Müller, Johannes A., Wark, Jesse R., Fernando, Rowena N., Arthur, Jonathan W., Robinson, Phillip J., Dietrich, Dirk, Schoch, Susanne, Graham, Mark E., UNSPECIFIED, and UNSPECIFIED (2019) The temporal profile of activity-dependent presynaptic phospho-signalling reveals long-lasting patterns of poststimulus regulation. PLoS Biology, 17 (3). e3000170. (In Press)

Ramialison, Mirana, Waardenberg, Ashley J., Schonrock, Nicole, Doan, Tram, de Jong, Danielle, Bouveret, Romaric, and Harvey, Richard P. (2017) Analysis of steric effects in DamID profiling of transcription factor target genes. Genomics, 109 (2). pp. 75-82.

Bottje, Walter, Kong, Byung-Whi, Reverter, Antonio, Waardenberg, Ashley J., Lassiter, Kentu, and Hudson, Nicholas J. (2017) Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency. BMC Systems Biology, 11. 29.

Waardenberg, Ashley J., Homan, Bernou, Mohamed, Stephanie, Harvey, Richard P., and Bouveret, Romaric (2016) Prediction and validation of protein–protein interactors from genome-wide DNA-binding data using a knowledge-based machine-learning approach. Open Biology, 6. 160183.

Waardenberg, Ashley J., Bassett, Samuel D., Bouveret, Romaric, and Harvey, Richard P. (2015) CompGO: an R package for comparing and visualizing gene ontology enrichment differences between DNA binding experiments. BMC Bioinformatics, 16. 275.

Cannon, Leah, Yu, Ze-Yan, Marciniec, Tadeusz, Waardenberg, Ashley J., Iismaa, Siiri E., Nikolova-Krstevski, Vesna, Neist, Elysia, Ohanian, Monique, Qiu, Min Ru, Rainer, Stephen, Harvey, Richard P., Feneley, Michael P., Graham, Robert M., and Fatkin, Diane (2015) Irreversible triggers for hypertrophic cardiomyopathy are established in the early postnatal period. Journal of the American College of Cardiology, 65 (6). pp. 560-569.

Bouveret, Romaric, Waardenberg, Ashley J., Schonrock, Nicole, Ramialison, Mirana, Doan, Tram, de Jong, Danielle, Bondue, Antoine, Kaur, Gurpreet, Mohamed, Stephanie, Fonoudi, Hananeh, Chen, Chiann-mun, Wouters, Merridee A., Bhattacharya, Shoumo, Plachta, Nicolas, Dunwoodie, Sally L., Chapman, Gavin, Blanpain, Cédric, and Harvey, Richard P. (2015) NKX2-5 mutations causative for congenital heart disease retain functionality and are directed to hundreds of targets. eLife, 4. e06942.

Kozlov, Sergei V., Waardenberg, Ashley J., Engholm-Keller, Kasper, Arthur, Jonathan W., Graham, Mark E., and Lavin, Martin (2015) Reactive oxygen species (ROS)-activated ATM-dependent phosphorylation of cytoplasmic substrates identified by large-scale phosphoproteomics screen. Molecular and Cellular Proteomics, 15 (3). pp. 1032-1047.

Sun, Wei, Hudson, Nicholas J., Reverter, Antonio, Waardenberg, Ashley, Tellam, Ross L, Vuocolo, Tony, Byrne, Keren, and Dalrymple, Brian P (2012) An always correlated gene expression landscape for ovine skeletal muscle, lessons learnt from comparison with an “equivalent” bovine landscape. BMC Research Notes, 5. 632.

Waardenberg, Ashley J., Bernardo, Bianca C., Ng, Dominic C. H., Shepherd, Peter R., Cemerlang, Nelly, Sbroggiò, Mauro, Wells, Christine A., Dalrymple, Brian P., Brancaccio, Mara, Lin, Ruby C. Y., McMullen, Julie R., and UNSPECIFIED (2011) Phosphoinositide 3-Kinase (PI3K(p110α)) directly regulates key components of the Z-disc and cardiac structure. Journal of Biological Chemistry, 286 (35). pp. 30837-30846.

The Bovine Genome Sequencing and Analysis Consortium, , Elsik, Christine G., Tellam, Ross L., and Worley, Kim C. (2009) The genome sequence of Taurine cattle: a window to ruminant biology and evolution. Science, 324 (5926). pp. 522-528.

Waardenberg, Ashley J., Reverter, Antonio, Wells, Christine A., and Dalrymple, Brian P. (2008) Using a 3D virtual muscle model to link gene expression changes during myogenesis to protein spatial location in muscle. BMC Systems Biology, 2. 88.

This list was generated on Mon Nov 18 22:36:22 2019 AEST.