Fong, Jenny, Jackson, Timothy L, Flores, Florita, Antunes, Elsa, Abdul Wahab, Muhammad Azmi, Negri, Andrew P., and Diaz-Pulido, Guillermo (2024) The interplay of temperature, light, and substrate type in driving growth and reproduction of an important tropical crustose coralline alga. Journal of Applied Phycology. (In Press)

Whitman, T.N., Hoogenboom, M.O., Negri, A.P., and Randall, C.J. (2024) Coral-seeding devices with fish-exclusion features reduce mortality on the Great Barrier Reef. Scientific Reports, 14. 13332.

Fong, Jenny, Ramsby, Blake D., Flores, Florita, Dada, Tewodros, Antunes, Elsa, Abdul Wahab, Muhammad Azmi, Severati, Andrea, Negri, Andrew P., and Diaz-Pulido, Guillermo (2024) Effects of material type and surface roughness of settlement tiles on macroalgal colonisation and early coral recruitment success. Coral Reefs, 43. pp. 1083-1096.

Nordborg, F. Mikaela, Brinkman, Diane L., Fisher, Rebecca, Parkerton, Thomas F., Oelgemöller, Michael, and Negri, Andrew P. (2023) Effects of aromatic hydrocarbons and evaluation of oil toxicity modelling for larvae of a tropical coral. Marine Pollution Bulletin, 196. 115610.

Thomas, Marie C., Waugh, Gretel, Vanwonterghem, Inka, Webster, Nicole S., Rinke, Christian, Fisher, Rebecca, Luter, Heidi M., and Negri, Andrew P. (2023) Protecting the invisible: Establishing guideline values for copper toxicity to marine microbiomes. Science of the Total Environment, 904. 166658.

Brinkman, Diane L., Flores, Florita, Luter, Heidi M., Nordborg, F. Mikaela, Brooks, Maxime, Parkerton, Thomas F., and Negri, Andrew P. (2023) Sensitivity of the Indo-Pacific coral Acropora millepora to aromatic hydrocarbons. Environmental Pollution, 332. 121963.

Nordborg, F. Mikaela, Brinkman, Diane L., and Negri, Andrew P. (2022) Coral recruits are highly sensitive to heavy fuel oil exposure both in the presence and absence of UV light. Environmental Pollution, 309. 119799.

Brunner, Christopher A., Ricardo, Gerard F., Uthicke, Sven, Negri, Andrew P., and Hoogenboom, Mia O. (2022) Effects of climate change and light limitation on coral recruits. Marine Ecology Progress Series, 690. pp. 65-82.

Brunner, Christopher, Uthicke, Sven, Ricardo, Gerard F., Hoogenboom, Mia O., and Negri, Andrew P. (2021) Climate change doubles sedimentation-induced coral recruit mortality. Science of the Total Environment, 768. 143897.

Nordborg, F. Mikaela, Brinkman, Diane L., Ricardo, Gerard F., Agusti, Susana, and Negri, Andrew P. (2021) Comparative sensitivity of the early life stages of a coral to heavy fuel oil and UV radiation. Science of the Total Environment, 781. 146676.

Berry, K.L.E., Hess, S., Clark, T.D., Wenger, A.S., Hoogenboom, M.O., and Negri, A.P. (2021) Effects of suspended coal particles on gill structure and oxygen consumption rates in a coral reef fish. Marine Pollution Bulletin, 169. 112459.

Marzonie, Magena, Flores, Florita, Sadoun, Nora, Thomas, Marie C., Valada-Mennuni, Anais, Kaserzon, Sarit, Mueller, Jochen F., and Negri, Andrew P. (2021) Toxicity thresholds of nine herbicides to coral symbionts (Symbiodiniaceae). Scientific Reports, 11. 21636.

Mohamed, Amin R., Andrade, Natalia, Moya, Aurelie, Chan, Cheong Xin, Negri, Andrew P., Bourne, David G., Ying, Hua, Ball, Eldon E., and Miller, David J. (2020) Dual RNA-sequencing analyses of a coral and its native symbiont during the establishment of symbiosis. Molecular Ecology, 29 (20). pp. 3921-3937.

Randall, Carly J, Speaks, Justin E., Lager, Claire, Hagedorn, Mary, Llewellyn, Lyndon, Pulak, Rock, Thompson, Julia, Bay, Line K., Mead, David, Heyward, Andrew J., and Negri, Andrew P. (2020) Rapid counting and spectral sorting of live coral larvae using large-particle flow cytometry. Scientific Reports, 10. 12919.

Whitman, Taylor N., Negri, Andrew P., Bourne, David G., and Randall, Carly J. (2020) Settlement of larvae from four families of corals in response to a crustose coralline alga and its biochemical morphogens. Scientific Reports, 10. 16397.

Randall, Carly J., Negri, Andrew P., Quigley, Kate M., Foster, Taryn, Ricardo, Gerard F., Webster, Nicole S., Bay, Line K., Harrison, Peter L., Babcock, Russ C., and Heyward, Andrew J. (2020) Sexual production of corals for reef restoration in the Anthropocene. Marine Ecology Progress Series, 635. pp. 203-232.

Thomas, Marie C., Flores, Florita, Kaserzon, Sarit, Fisher, Rebecca, and Negri, Andrew P. (2020) Toxicity of ten herbicides to the tropical marine microalgae Rhodomonas salina. Scientific Reports, 10. 7610.

Nordborg, F. Mikaela, Jones, Ross J., Oelgemöller, Michael, and Negri, Andrew P. (2020) The effects of ultraviolet radiation and climate on oil toxicity to coral reef organisms – a review. Science of the Total Environment, 720. 137486.

Randall, Carly J., Giuliano, Christine, Mead, David, Heyward, Andrew J., and Negri, Andrew P. (2019) Immobilisation of living coral embryos and larvae. Scientific Reports, 9. 14596.

Berry, Kathryn L.E., Epstein, Hannah E., Lewis, Phoebe J., Hall, Nora M., and Negri, Andrew P. (2019) Microplastic contamination has limited effects on coral fertilisation and larvae. Diversity, 11 (12). 228.

Chakravarti, Leela J., Negri, Andrew P., and van Oppen, Madeleine J.H. (2019) Thermal and herbicide tolerances of chromerid algae and their ability to form a symbiosis with corals. Frontiers In Microbiology, 10. 173.

Mercurio, Philip, Eaglesham, Geoff, Parks, Stephen, Kenway, Matt, Beltran, Victor, Flores, Florita, Mueller, Jochen F., and Negri, Andrew P. (2018) Contribution of transformation products towards the total herbicide toxicity to tropical marine organisms. Scientific Reports, 8. 4808.

Overmans, Sebastian, Nordborg, Mikaela, Díaz-Rúa, Rubén, Brinkman, Diane L., Negri, Andrew P., and Agustí, Susana (2018) Phototoxic effects of PAH and UVA exposure on molecular responses and developmental success in coral larvae. Aquatic Toxicology, 198. pp. 165-174.

Nordborg, F. Mikaela, Flores, Florita, Brinkman, Diane L., Agustí, Susana, and Negri, Andrew P. (2018) Phototoxic effects of two common marine fuels on the settlement success of the coral Acropora tenuis. Scientific Reports, 8. 8635.

Ricardo, Gerard F., Jones, Ross J., Clode, Peta L., Humanes, Adriana, Giofre, Natalie, and Negri, Andrew P. (2018) Sediment characteristics influence the fertilisation success of the corals Acropora tenuis and Acropora millepora. Marine Pollution Bulletin, 135. pp. 941-953.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, Langlois, Lucas, Ralph, Peter J., and Negri, Andrew P. (2017) Combined effects of temperature and the herbicide diuron on Photosystem II activity of the tropical seagrass Halophila ovalis. Scientific Reports, 7. 45404. pp. 1-11.

Humanes, Adriana, Ricardo, Gerard F., Willis, Bette L., Fabricius, Katharina E., and Negri, Andrew P. (2017) Cumulative effects of suspended sediments, organic nutrients and temperature stress on early life history stages of the coral Acropora tenuis. Scientific Reports, 7. 44101.

Humanes Schumann, Adriana, Fink, Artur, Willis, Bette L., Fabricius, Katharina E., de Beer, Dirk, and Negri, Andrew P. (2017) Effects of suspended sediments and nutrient enrichment on juvenile corals. Marine Pollution Bulletin, 125 (1-2). pp. 166-175.

Angly, Florent E., Pantos, Olga, Morgan, Thomas C., Rich, Virginia, Tonin, Hemerson, Bourne, David G., Mercurio, Philip, Negri, Andrew P., and Tyson, Gene W. (2016) Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon. PeerJ, 4. e1758. pp. 1-23.

Berry, Kathryn L.E., Hoogenboom, Mia O., Flores, Florita, and Negri, Andrew P. (2016) Simulated coal spill causes mortality and growth inhibition in tropical marine organisms. Scientific Reports, 6. 25894. pp. 1-8.

Schaffelke, Britta, Brinkman, Richard, Dobbs, Kirstin, Jones, Ross, Kane, Kevin, Negri, Andrew, and Rasheed, Michael (2016) The establishment of a future NESP dredging research investment framework: NESP TWQ Hub Project 1.9. Report. Reef and Rainforest Research Centre Limited, Cairns, QLD, Australia.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, and Negri, Andrew P. (2015) Acute and additive toxicity of ten photosystem-II herbicides to seagrass. Scientific Reports, 5. 17443. pp. 1-11.

Negri, Andrew P., Flores, Florita, Mercurio, Phil, Mueller, Jochen F., and Collier, Catherine J. (2015) Lethal and sub-lethal chronic effects of the herbicide diuron on seagrass. Aquatic Toxicology, 165. pp. 73-83.

Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, Mercurio, Phil, O'Brien, Jake, Ralph, Peter J., and Negri, Andrew P. (2015) A miniature bioassay for testing the acute phytotoxicity of Photosystem II herbicides on seagrass. PLoS ONE, 10 (2). e0117541. pp. 1-17.

Devlin, Michelle, Fabricius, Katharina, Negri, Andrew, Brodie, Jon, Waterhouse, Jane, Uthicke, Sven, Collier, Catherine, Pressey, Bob, Augé, Amélie, Reid, Ben, Woodberry, Owen, Zhao, Jian-xin, Clarke, Tara, Pandolfi, John, and Bennett, John (2015) Water quality synthesis of NERP tropical ecosystems hub GBR water quality research outputs 2011-2014. Report. Reef and Rainforest Research Centre, Cairns, Australia.

Cumbo, Vivian R., Baird, Andrew H., Moore, Robert B., Negri, Andrew P., Neilan, Brett A., Salih, Anya, van Oppen, Madeleine J.H., Wang, Yan, and Marquis, Christopher P. (2013) Chromera velia is endosymbiotic in larvae of the reef corals Acropora digitifera and A. tenuis. Protist, 164 (2). pp. 237-244.

Flores, Florita, Collier, Catherine J., Mercurio, Philip, and Negri, Andrew P. (2013) Phytotoxicity of four photosystem II herbicides to tropical seagrasses. PLoS ONE, 8 (9). e75798. pp. 1-12.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2013) Pesticide contamination and phytotoxicity of sediment interstitial water to tropical benthic microalgae. Water Research, 47 (14). pp. 5211-5221.

Brodie, Jon, Waterhouse, Jane, Maynard, Jeffrey, Bennett, John, Furnas, Miles, Devlin, Michelle, Lewis, Stephen, Collier, Catherine, Schaffelke, Britta, Fabricius, Katharina, Petus, Caroline, da Silva, Eduardo, Zeh, Daniel, Randall, Lucy, Brando, Vittorio, McKenzie, Len, O'Brien, Dominique, Smith, Rachael, Warne, Michael, Brinkman, Richard, Tonin, Hemerson, Bainbridge, Zoe, Bartley, Rebecca, Negri, Andrew, Turner, Ryan, Davis, Aaron, Bentley, Christie, Mueller, Jochen, Alvarez-Romero, Jorge, Henry, Nyssa, Waters, David, Yorkston, Hugh, and Tracey, Dieter (2013) Assessment of the relative risk of water quality to ecosystems of the Great Barrier Reef. A report to the Department of the Environment and Heritage Protection, Queensland Government, Brisbane - Report 13/28. Report. James Cook University, Townsville, QLD, Australia.

Flores, Florita, Hoogenboom, Mia O., Smith, Luke D., Cooper, Timothy F., Abrego, David, and Negri, Andrew P. (2012) Chronic exposure of corals to fine sediments: lethal and sub-lethal impacts. PLoS ONE, 7 (5). e37795. pp. 1-12.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2012) Chronic herbicide exposures affect the sensitivity and community structure of tropical benthic microalgae. Marine Pollution Bulletin, 65 (4-9). pp. 363-372.

Whalan, Steve, Webster, Nicole S., and Negri, Andrew P. (2012) Crustose coralline algae and a cnidarian neuropeptide trigger larval settlement in two coral reef sponges. PLoS ONE, 7 (1). e30386. pp. 1-8.

Botté, E.S., Jerry, D.R., King, S. Codi, Smith-Keune, C., and Negri, A.P. (2012) Effects of chlorpyrifos on cholinesterase activity and stress markers in the tropical reef fish Acanthochromis polyacanthus. Marine Pollution Bulletin, 65 (4-9). pp. 384-393.

Grasso, L.C., Negri, A.P., Fôret, S., Saint, R., Hayward, D.C., Miller, D.J., and Ball, E.E. (2011) The biology of coral metamorphosis: molecular responses of larvae to inducers of settlement and metamorphosis. Developmental Biology, 353 (2). pp. 411-419.

Negri, Andrew P., and Hoogenboom, Mia O. (2011) Water contamination reduces the tolerance of coral larvae to thermal stress. PLoS ONE, 6 (5). pp. 19703-19712.

Magnusson, Marie, Heimann, Kirsten, Quayle, Pamela, and Negri, Andrew P. (2010) Additive toxicity of herbicide mixtures and comparative sensitivity of tropical benthic microalgae. Marine Pollution Bulletin, 60 (11). pp. 1978-1987.

Glas, Martin S., Motti, Cherie A., Negri, Andrew P., Sato, Yui, Froscio, Suzanne, Humpage, Andrew R., Krock, Bernd, Cembella, Allan, and Bourne, David G (2010) Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef. FEMS Microbiology Ecology, 73 (1). pp. 43-54.

Cantin, N.E., van Oppen, M.J.H., Willis, B.L., Mieog, J.C., and Negri, A.P. (2009) Juvenile corals can acquire more carbon from high-performance algal symbionts. Coral Reefs, 28 (2). pp. 405-414.

Jones, A.M., Cantin, N.E., Berkelmans, R., Sinclair, B., and Negri, A.P. (2008) A 3D modeling method to calculate the surface areas of coral branches. Coral Reefs, 27 (3). pp. 521-526.

Magnusson, Marie, Heimann, Kirsten, and Negri, Andrew P. (2008) Comparative effects of herbicides on photosynthesis and growth of tropical estuarine microalgae. Marine Pollution Bulletin, 56 (9). pp. 1545-1552.

Cantin, Neal E., Negri, Andrew P., and Willis, Bette L. (2007) Photoinhibition from chronic herbicide exposure reduces reproductive output of reef-building corals. Marine Ecology Progress Series, 344. pp. 81-93.

Markey, Kathryn L., Baird, Andrew H., Humphrey, Craig, and Negri, Andrew P. (2007) Insecticides and a fungicide affect multiple coral life stages. Marine Ecology Progress Series, 330. pp. 127-137.

Magnusson, Marie, Heimann, Kirsten, Negri, Andrew, and Ridd, Michael (2007) Comparative effects of herbicides on photosynthesis and growth of the tropical microalga Nephroselmis pyriformis. In: Journal of Phycology. p. 53. From: Phycological Society of America / International Society of Protistologists Meeting 2007, 5-10 August 2007, Providence, Rhode Island, USA.

Robertson, Alison, Negri, Andrew P., Burnell, James N., and Llewellyn, Lyndon E. (2006) Development and assessment of radioreceptor binding assays for the detection of saxitoxin binding proteins in biological extracts. Analytical Biochemistry, 356 (1). pp. 66-75.

Llewellyn, Lyndon, Negri, Andrew, and Robertson, Alison (2006) Paralytic shellfish toxins in tropical oceans. Toxin Reviews, 25 (2). pp. 159-196.

Harrington, Lindsay, Fabricius, Katharina, Eaglesham, Geoff, and Negri, Andrew (2005) Synergistic effects of diuron and sedimentation on photosynthesis and survival of crustose coralline algae. Marine Pollution Bulletin, 51 (1-4). pp. 415-427.

Robertson, Alison, Stirling, David, Robillot, Cedric, Llewellyn, Lyndon, and Negri, Andrew (2004) First report of saxitoxin in octopi. Toxicon, 44 (7). pp. 765-771.

Harrington, Lindsay, Fabricius, Katharina, De'ath, Glenn, and Negri, Andrew (2004) Recognition and selection of settlement substrata determine post-settlement survival in corals. Ecology, 85 (12). pp. 3428-3437.

Mercurio, Philip, Burns, Kathryn A., and Negri, Andrew (2004) Testing the ecotoxicology of vegetable versus mineral based lubricating oils: 1. Degradation rates using tropical marine microbes. Environmental Pollution, 129 (2). pp. 165-173.

Webster, Nicole S., Negri, Andrew P., Webb, Richard I., and Hill, Russell T. (2002) A spongin-boring α-proteobacterium is the etiological agent of disease in the Great Barrier Reef sponge Rhopaloeides odorabile. Marine Ecology Progress Series, 232. pp. 305-309.

Webster, Nicole S., Webb, Richard I., Ridd, Michael J., Hill, Russell T., and Negri, Andrew P. (2001) The effects of copper on the microbial community of a coral reef sponge. Environmental Microbiology, 3 (1). pp. 19-31.