Characterisation of eleven new polymorphic microsatellite markers for the coastal stingray Dasyatis brevicaudata (Dasyatidae Hutton 1875), and cross-amplification in seven dasyatid species
Le Port, A., Roycroft, E.J., Thakur, V., and Lavery, S.D. (2016) Characterisation of eleven new polymorphic microsatellite markers for the coastal stingray Dasyatis brevicaudata (Dasyatidae Hutton 1875), and cross-amplification in seven dasyatid species. Biochemical Systematics and Ecology, 65. pp. 234-237.
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Abstract
Twelve microsatellite loci were developed for the short-tailed stingray Dasyatis brevicaudata using a next-generation sequencing approach, and their utility for population genetics studies was assessed. Eleven out of twelve loci were polymorphic (4-15 alleles) and amplified reliably, with observed heterozygosities between 0.32 and 0.86 (mean = 0.56). Successful cross-species amplification of many of these markers was achieved across seven other dasyatid species currently listed as "Data Deficient" by the IUCN, suggesting these microsatellites will be a useful resource for the investigation of ecological and conservation genetics in a range of species of conservation concern.
Item ID: | 45448 |
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Item Type: | Article (Research - C1) |
ISSN: | 1873-2925 |
Keywords: | coastal elasmobranch, microsatellite, conservation, habitat degradation, population genetics, PCR primers |
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Funders: | University of Auckland (UA) |
Projects and Grants: | UA NZGL00225 |
Date Deposited: | 22 Jun 2016 07:49 |
FoR Codes: | 31 BIOLOGICAL SCIENCES > 3105 Genetics > 310599 Genetics not elsewhere classified @ 100% |
SEO Codes: | 97 EXPANDING KNOWLEDGE > 970106 Expanding Knowledge in the Biological Sciences @ 100% |
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