Article

Zhang, Jia, Richards, Zoe T., Adam, Arne A.S., Chan, Cheong Xin, Shinzato, Chuya, Gilmour, James, Thomas, Luke, Strugnell, Jan M., Miller, David J., and Cooke, Ira (2022) Evolutionary Responses of a Reef-building Coral to Climate Change at the End of the Last Glacial Maximum. Molecular Biology and Evolution, 39 (10). msac201.

Wang, Xinfeng, He, Ziwen, Guo, Zixiao, Yang, Ming, Xu, Shaohua, Chen, Qipian, Shao, Shao, Li, Sen, Zhong, Cairong, Duke, Norman C., and Shi, Suhua (2022) Extensive gene flow in secondary sympatry after allopatric speciation. National Science Review, 9 (12). nwac280.

Bloesch, Zoë, Nauheimer, Lars, Almeida, Thais Elias, Crayn, Darren, and Field, Ashley Raymond (2022) HybPhaser identifies hybrid evolution in Australian Thelypteridaceae. Molecular Phylogenetics and Evolution, 173. 107526.

Ghezelayagh, Ava, Harrington, Richard C., Burress, Edward D., Campbell, Matthew A., Buckner, Janet C., Chakrabarty, Prosanta, Glass, Jessica R., McCraney, W. Tyler, Unmack, Peter J., Thacker, Christine E., Alfaro, Michael E., Friedman, Sarah T., Ludt, William B., Cowman, Peter F., Friedman, Matt, Price, Samantha A., Dornburg, Alex, Faircloth, Brant C., Wainwright, Peter C., and Near, Thomas J. (2022) Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous. Nature Ecology & Evolution, 6. pp. 1211-1220.

Nauheimer, Lars, Weigner, Nicholas, Joyce, Elizabeth, Crayn, Darren, Clarke, Charles, and Nargar, Katharina (2021) HybPhaser: a workflow for the detection and phasing of hybrids in target capture data sets. Applications in Plant Sciences, 9 (7). e11441.

Fortunato, Antonio Emidio, Sordino, Paolo, and Andreakis, Nikos (2016) Evolution of the SOUL heme-binding protein superfamily across eukarya. Journal of Molecular Evolution, 82 (6). pp. 279-290.

Lee, Ping-Shin, Gan, Han Ming, Clements, Gopalasamy Reuben, and Wilson, John-James (2016) Field calibration of blowfly-derived DNA against traditional methods for assessing mammal diversity in tropical forests. Genome, 59 (11). pp. 1008-1022.

Thesis

Zhang, Jia (2023) Exploiting whole-genome sequencing to understand the evolution of corals and their symbionts. PhD thesis, James Cook University.