Publications by: ARC Centre of Excellence for Coral Reef Studies

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Article

Bedoya Taborda, Luisa Fernanda, Barnes, Michele L., and Morrison, Tiffany H. (2024) Adaptation and Peace: Extending the Agenda for Capacity‐Building in Climate and Conflict‐Affected Communities. WIREs Climate Change. (In Press)

Remmers, Tiny, Grech, Alana, Roelfsema, Chris, Gordon, Sophie, Lechene, Marine, and Ferrari, Renata (2024) Close-range underwater photogrammetry for coral reef ecology: a systematic literature review. Coral Reefs, 43. pp. 35-52.

Hayes, Chloe, Mitchell, Angus, Mellin, Camille, Booth, David J., Ravasi, Timothy, and Nagelkerken, Ivan (2024) Ecological generalism and physiology mediate fish biogeographic ranges under ocean warming. Proceedings of the Royal Society of London Series B, Biological Sciences, 291 (2015). 20232206.

Lechene, Marine A.A., Figueira, Will F., Murray, Nicholas J., Aston, Eoghan A., Gordon, Sophie E., and Ferrari, Renata (2024) Evaluating error sources to improve precision in the co-registration of underwater 3D models. Ecological Informatics, 81. 102632.

Datta, Amber W., Wyborn, Carina, Chaffin, Brian C., and Barnes, Michele L. (2024) Imagining reef futures after mass coral bleaching events. Environmental Science & Policy, 151. 103625.

Wolanski, Eric, De Le Court, Miguel, Lambrechts, Jonathan, and Kingsford, Michael (2024) Mechanisms enabling the self-recruitment of coral and crown-of-thorns starfish larvae in the Great Barrier Reef. Estuarine, Coastal and Shelf Science, 309. 108976.

Mason, Benjamin, Hayward, David C., Moya, Aurelie, Cooke, Ira, Sorenson, Alanna, Brunner, Ramona, Andrade Rodriguez, Natalia, Huerlimann, Roger, Bourne, David G., Schaeffer, Patrick, Grinblat, Mila, Ravasi, Timothy, Ueda, Nobuo, Tang, Sen-Lin, Ball, Eldon E., and Miller, David J. (2024) Microbiome manipulation by corals and other Cnidaria via quorum quenching. Current Biology, 34. pp. 3226-3232.

Mather, Rachel, Chin, Andrew, Rigby, Cassandra, Cooke, Steven J., Fahmi, Haque, Alifa Bintha, Mizrahi, Meira, and Grant, Michael I. (2024) Murky waters: Assessing the vulnerabilities of Indo-West Pacific non-marine elasmobranchs to inform future conservation planning priorities. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (1). e4039.

Ceccarelli, Daniela M., Logan, Murray, Evans, Richard D., Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Sinclair-Taylor, Tane, Srinivasan, Maya, and Williamson, David H. (2024) Regional-scale disturbances drive long-term decline of inshore coral reef fish assemblages in the Great Barrier Reef Marine Park. Global Change Biology, 30 (10). 17506.

Eustache, Kim B., van Loon, Emiel, Rummer, Jodie L., Planes, Serge, and Smallegange, Isabel (2024) Spatial and temporal analysis of juvenile blacktip reef shark (Carcharhinus melanopterus) demographies identifies critical habitats. Journal of Fish Biology, 104 (1). pp. 92-103.

Rueger, Theresa, MacDonald, Chancey, Harrison, Hugo B., Gardiner, Naomi P., Jones, Geoffrey P., and Mills, Suzanne C. (2024) Strength of Sexual Selection and Sex Roles Vary between Social Groups in a Coral Reef Cardinalfish. American Naturalist, 204 (3).

Cumming, Graeme, James, Nicholas L., Chua, Chia-Miin, and Huertas, Victor (2024) A framework and review of evidence of the importance of coral reefs for marine birds in tropical ecosystems. Ecology and Evolution, 14 (8). e70165.

Graham, Epstein, Apetrei, Cristina, Baggio, Jacopo, Chawla, Sivee, Cumming, Graeme, Gurney, Georgina, Morrison, Tiffany, Unnikrishnan, Hita, and Villamayor Tomas, Sergio (2024) The problem of institutional fit: Uncovering patterns with boosted decision trees. International Journal of the Commons, 18 (1). pp. 1-16.

Herrera, Marcela, Ravasi, Timothy, and Laudet, Vincent (2023) Anemonefishes: A model system for evolutionary genomics. F1000Research, 12. 204.

Kemink, Kaylan M., Pressey, Robert L., Adams, Vanessa M., Nolte, Christoph, Olimb, Sarah K., Healey, Aidan M., Liu, Boyan, Frerichs, Todd, and Renner, Randy (2023) Assessing prioritization measures for a private land conservation program in the U.S. Prairie Pothole Region. Conservation Science and Practice, 5 (7). e12939.

Jeunen, Gert-Jan, Cane, Jasmine S., Ferreira, Sara, Strano, Francesca, von Ammon, Ulla, Cross, Hugh, Day, Robert, Hesseltine, Sean, Ellis, Kaleb, Urban, Lara, Pearson, Niall, Olmedo-Rojas, Pamela, Kardailsky, Anya, Gemmell, Neil J., and Lamare, Miles (2023) Assessing the utility of marine filter feeders for environmental DNA (eDNA) biodiversity monitoring. Molecular Ecology Resources, 23 (4). pp. 771-786.

Horowitz, Jeremy, Quattrini, Andrea M., Brugler, Mercer R., Miller, David J., Pahang, Kristina, Bridge, Tom C.L., and Cowman, Peter F. (2023) Bathymetric evolution of black corals through deep time. Proceedings of the Royal Society of London Series B, Biological Sciences, 290 (2008). 20231107.

Tedesco, Anazélia M., López-Cubillos, Sofía, Chazdon, Robin, Rhodes, Jonathan R., Archibald, Carla L., Pérez-Hämmerle, Katharina-Victoria, Brancalion, Pedro H.S., Wilson, Kerrie A., Oliveira, Mariana, Correa, Diego F., Ota, Liz, Morrison, Tiffany H., Possingham, Hugh P., Mills, Morena, Santos, Fabiane C., and Dean, Angela J. (2023) Beyond ecology: ecosystem restoration as a process for social-ecological transformation. Trends in Ecology & Evolution, 38 (7). pp. 643-653.

Tebbett, Sterling B., Schlaefer, Jodie A., Bowden, Casey L., Collins, William P., Hemingson, Christopher R., Ling, Scott D., Morais, Juliano, Morais, Renato A., Siqueira, Alexandre C., Streit, Robert P., Swan, Sam, and Bellwood, David R. (2023) Bio-physical determinants of sediment accumulation on an offshore coral reef: A snapshot study. Science of the Total Environment, 895. 165188.

Suresh, Sneha, Mirasole, Alice, Ravasi, Timothy, Vizzini, Salvatrice, and Schunter, Celia (2023) Brain transcriptome of gobies inhabiting natural CO2 seeps reveal acclimation strategies to long-term acidification. Evolutionary Applications, 16 (7). pp. 1345-1358.

Anderson-King, K.D., Wayman, C., Stephenson, S., Heron, S.F., Lough, J.M., McWilliam, M., Richardson, L.E., Scott, M.E., and Cantin, N.E. (2023) Branching coral growth and visual health during bleaching and recovery on the central Great Barrier Reef. Coral Reefs, 42. pp. 1113-1129.

Cumming, Graeme S., and Bellwood, David R. (2023) Broad-scale analysis of fish community data suggests critical need to support regional connectivity of coral reefs. Ecological Applications, 33 (4). e2849.

Morrison, Tiffany, Bodin, Orjan, Cumming, Graeme, Lubell, Mark, Seppelt, Ralf, Seppelt, Tim, and Weible, Christopher (2023) Building blocks of polycentric governance. Policy Studies Journal, 51 (3). pp. 475-499.

Hedlund, Johanna, Nohrstedt, Daniel, Morrison, Tiffany, Moore, Michele-Lee, and Bodin, Örjan (2023) Challenges for environmental governance: policy issue interdependencies might not lead to collaboration. Sustainability Science, 18. pp. 219-234.

Maini, Bani, Blythe, Jessica L., Darling, Emily S., and Gurney, Georgina G. (2023) Charting the value and limits of other effective conservation measures (OECMs) for marine conservation: A Delphi study. Marine Policy, 147. 105350.

Bergseth, Brock J., Arias, Adrian, Barnes, Michele L., Caldwell, Iain, Datta, Amber, Gelcich, Stefan, Ham, Sam H., Lau, Jacqueline D., Ruano-Chamorro, Cristina, Smallhorn-West, Patrick, Weekers, Damian, Zamborain-Mason, Jessica, and Cinner, Joshua E. (2023) Closing the compliance gap in marine protected areas with human behavioural sciences. Fish and Fisheries, 24. pp. 695-704.

Manríquez, Patricio H., González, Claudio P., Jara, María Elisa, Watson, Sue-Ann, Torres, Rodrigo, Domenici, Paolo, and Duarte, Cristian (2023) Combined effects of climate change stressors and predators with contrasting feeding-digestion strategies on a mussel species. Marine Pollution Bulletin, 187. 114554.

Bergseth, Brock, and Day, Jon C. (2023) Compliance – The ‘Achilles heel’ of protected areas. Marine Policy, 155. 105728.

Hall, April E., Sievers, Katie T., and Kingsford, Michael J. (2023) Conservation benefits of no-take marine reserves outweigh modest benefits of partially protected areas for targeted coral reef fishes. Coral Reefs, 42. pp. 319-333.

Spiecker, Lisa, Curdt, Franziska, Bally, Andreas, Janzen, Nadja, Kraemer, Philipp, Leberecht, Bo, Kingsford, Michael J., Mouritsen, Henrik, Winklhofer, Michael, and Gerlach, Gabriele (2023) Coral reef fish larvae show no evidence for map-based navigation after physical displacement. iScience, 26 (6). 106950.

Cresswell, B.J., Galbraith, G.F., Harrison, H.B., McCormick, M.I., and Jones, G.P, (2023) Coral reef pinnacles act as ecological magnets for the abundance, diversity and biomass of predatory fishes. Marine Ecology Progress Series, 717. pp. 143-156.

Chow, Cher F.Y., Bolton, Caitlin, Boutros, Nader, Brambilla, Viviana, Fontoura, Luisa, Hoey, Andrew S., Madin, Joshua S., Pizarro, Oscar, Torres-Pulliza, Damaris, Woods, Rachael M., Zawada, Kyle J.A., Barbosa, Miguel, and Dornelas, Maria (2023) Coral settlement and recruitment are negatively related to reef fish trait diversity. Coral Reefs, 42. pp. 519-533.

Matias, Ambrosio Melvin A., Popovic, Iva, Thia, Joshua A., Cooke, Ira R., Torda, Gergely, Lukoschek, Vimoksalehi, Bay, Line, Kim, Sun, and Riginos, Cynthia (2023) Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef. Evolutionary Applications, 16 (2). pp. 293-310.

Zoeller, Kim C., and Cumming, Graeme S. (2023) Cultural functional groups associated with birds relate closely to avian ecological functions and services. Ecosystem Services, 60. 101519.

Borghi, Stefano, Clements, Matthew, Webb, Monique, Bostock, Helen, Webster, Jody M., McNeil, Mardi, Nothdurft, Luke, and Byrne, Maria (2023) Discovery of the dendrophylliid scleractinian Heteropsammia cochlea (Spengler, 1781) in Halimeda bioherms of the Northern Great Barrier Reef. Marine Biodiversity, 53 (3). 39.

Alvarez-Noriega, Mariana, Madin, Joshua S., Baird, Andrew H., Dornelas, Maria, and Connolly, Sean R. (2023) Disturbance-induced changes in population size structure promote coral biodiversity. American Naturalist, 202 (5). pp. 604-615.

Blandford, M.I., Hillcoat, K.B., Pratchett, M.S., and Hoey, A.S. (2023) Effects of habitat fragmentation on the recruitment and early post-settlement survival of coral reef fishes. Marine Environmental Research, 183. 105798.

Thomas, Peyton A., Peele, Emily E., Wheeler, Carolyn R., Yopak, Kara, Rummer, Jodie L., Mandelman, John W., and Kinsey, Stephen T. (2023) Effects of projected end-of-century temperature on the muscle development of neonate epaulette sharks, Hemiscyllium ocellatum. Marine Biology, 170. 71.

Grinblat, Mila, Eyal-Shaham, Lee, Eyal, Gal, Ben-Zvi, Or, Harii, Saki, Morita, Masaya, Sakai, Kazuhiko, Hirose, Mamiko, Miller, David J., and Loya, Yossi (2023) Energy allocation trade-offs as a function of age in fungiid corals. Frontiers in Marine Science, 10. 1113987.

McMahon, Shannon J., Munday, Philip L., and Donelson, Jennifer M. (2023) Energy use, growth and survival of coral reef snapper larvae reared at elevated temperatures. Coral Reefs, 42. pp. 31-42.

Spalding, Ana K., Grorud-Colvert, Kirsten, Allison, Edward H., Amon, Diva J., Collin, Rachel, de Vos, Asha, Friedlander, Alan M., Johnson, Steven Mana’oakamai, Mayorga, Juan, Paris, Claire B., Scott, Cinda, Suman, Daniel O., Cisneros-montemayor, Andrés M., Estradivari, Estradivari, Giron-Nava, Alfredo, Gurney, Georgina G., Harris, Jean M., Hicks, Christina, Mangubhai, Sangeeta, Micheli, Fiorenza, Naggea, Josheena, Obura, David, Palacios-Abrantes, Juliano, Pouponneau, Angelique, and Vega Thurber, Rebecca (2023) Engaging the tropical majority to make ocean governance and science more equitable and effective. npj Ocean Sustainability, 2 (1).

Cork, Steven, Alexandra, Carla, Alvarez-Romero, Jorge G., Bennett, Elena M., Berbés-Blázquez, Marta, Bohensky, Erin, Bok, Barbara, Costanza, Robert, Hashimoto, Shizuka, Hill, Rosemary, Inayatullah, Sohail, Kok, Kasper, Kuiper, Jan J., Moglia, Magnus, Pereira, Laura, Peterson, Garry, Weeks, Rebecca, and Wyborn, Carina (2023) Exploring Alternative Futures in the Anthropocene. Annual Review of Environment and Resources, 48. pp. 25-54.

Baird, Andrew, Prior, Susan, Bridge, Thomas, and Cowman, Peter (2023) First records of coral spawning on Norfolk Island. Galaxea, Journal of Coral Reef Studies, 25 (1). pp. 3-4.

Eustache, Kim B., Boissin, Émilie, Tardy, Céline, Bouyoucos, Ian A., Rummer, Jodie L., and Planes, Serge (2023) Genetic evidence for plastic reproductive philopatry and matrotrophy in blacktip reef sharks (Carcharhinus melanopterus) of the Moorea Island (French Polynesia). Scientific Reports, 13. 14913.

Gijsbers, J.C., Englebert, N., Prata, K.E., Pichon, M., Dinesen, Z., Brunner, R., Eyal, G., González-Zapata, F.L., Kahng, S.E., Latijnhouwers, K.R.W., Muir, P., Radice, V.Z., Sánchez, J.A., Vermeij, M.J.A., Hoegh-Guldberg, O., Jacobs, S.J., and Bongaerts, P. (2023) Global phylogenomic assessment of Leptoseris and Agaricia reveals substantial undescribed diversity at mesophotic depths. BMC Biology, 21. 147.

Wilkinson, Adam, Ariel, Ellen, Van De Merwe, Jason, and Brodie, Jon (2023) Green Turtle (Chelonia mydas) Blood and Scute Trace Element Concentrations in the Northern Great Barrier Reef. Environmental Toxicology and Chemistry, 42 (11). pp. 2375-2388.

Fakan, Eric P., Allan, Bridie J.M., Illing, Bjorn, Hoey, Andrew S., and McCormick, Mark I. (2023) Habitat complexity and predator odours impact on the stress response and antipredation behaviour in coral reef fish. PLoS ONE, 18 (6). e0286570.

Reimer, James Davis, Agostini, Sylvain, Golbuu, Yimnang, Harvey, Ben P., Izumiyama, Michael, Jamodiong, Emmeline A., Kawai, Erina, Kayanne, Hajime, Kurihara, Haruko, Ravasi, Timothy, Wada, Shigeki, and Rodolfo-Metalpa, Riccardo (2023) High abundances of zooxanthellate zoantharians (Palythoa and Zoanthus) at multiple natural analogues: potential model anthozoans? Coral Reefs, 42. pp. 707-715.

Song, Shuang, Wang, Shuai, Wu, Xutong, Wei, Yongping, Cumming, Graeme S., Qin, Yue, Wu, Xilin, and Fu, Bojie (2023) Identifying Regime Transitions for Water Governance in the Yellow River Basin, China. Water Resources Research, 59 (12). e2022WR033819.

Lang, Bethan J., Caballes, Ciemon F., Uthicke, Sven, Doll, Peter C., Donelson, Jennifer M., and Pratchett, Morgan S. (2023) Impacts of ocean warming on the settlement success and post‐settlement survival of Pacific crown‐of‐thorns starfish (Acanthaster cf. solaris). Coral Reefs, 42. pp. 143-155.

Ivimey-Cook, Edward R., Pick, Joel L., Bairos-Novak, Kevin R., Culina, Antica, Gould, Elliot, Grainger, Matthew, Marshall, Benjamin M., Moreau, David, Paquet, Matthieu, Royauté, Raphaël, Sánchez-Tójar, Alfredo, Silva, Inês, and Windecker, Saras M. (2023) Implementing code review in the scientific workflow: Insights from ecology and evolutionary biology. Journal of Evolutionary Biology, 36 (10). pp. 1347-1356.

Gallo-Cajiao, Eduardo, Dolšak, Nives, Prakash, Aseem, Mundkur, Taej, Harris, Paul G., Mitchell, Ronald B., Davidson, Nick, Hansen, Birgita, Woodworth, Bradley K., Fuller, Richard A., Price, Melissa, Petkov, Nicky, Mauerhofer, Volker, Morrison, Tiffany H., Watson, James E.M., Chowdhury, Sayam U., Zöckler, Christoph, Widerberg, Oscar, Yong, Ding Li, Klich, Daniel, Smagol, Vitaliy, Piccolo, John, and Biggs, Duan (2023) Implications of Russia’s invasion of Ukraine for the governance of biodiversity conservation. Frontiers in Conservation Science, 4. 989019.

Stephenson, Robert L., Hobday, Alistair J., Butler, Ian, Cannard, Toni, Cowlishaw, Mel, Cresswell, Ian, Cvitanovic, Christopher, Day, Jon C., Dobbs, Kirstin, Dutra, Leo X.C., Frusher, Stewart, Fudge, Maree, Fulton, Beth, Gillanders, Bronwyn M., Gollan, Natalie, Haward, Marcus, Hutton, Trevor, Jordan, Alan, McDonald, Jan, Macleod, Catriona, Pecl, Gretta, Plaganyi, Eva E., van Putten, Ingrid, Vince, Joanna, and Ward, Timothy (2023) Integrating management of marine activities in Australia. Ocean & Coastal Management, 234 (March). 106465.

Roper, C.D., Donelson, J.M., Ferguson, S., van Oppen, M.J.H., and Cantin, N.E. (2023) Long-term preconditioning of the coral Pocillopora acuta does not restore performance in future ocean conditions. Coral Reefs, 42. pp. 1079-1096.

Cartwright, Paula J., Browne, Nicola K., Belton, David, Parnum, Iain, O'leary, Michael, Valckenaere, Jurgen, Fearns, Peter, and Lowe, Ryan (2023) Long-term spatial variations in turbidity and temperature provide new insights into coral-algal states on extreme/marginal reefs. Coral Reefs, 42. pp. 859-872.

Cannon, Sara E., Donner, Simon D., Liu, Angela, González Espinosa, Pedro C., Baird, Andrew H., Baum, Julia K., Bauman, Andrew G., Beger, Maria, Benkwitt, Cassandra E., Birt, Matthew J., Chancerelle, Yannick, Cinner, Joshua E., Crane, Nicole L., Denis, Vianney, Depczynski, Martial, Fadli, Nur, Fenner, Douglas, Fulton, Christopher J., Golbuu, Yimnang, Graham, Nicholas A.J., Guest, James, Harrison, Hugo B., Hobbs, Jean-Paul A., Hoey, Andrew S., Holmes, Thomas H., Houk, Peter, Januchowski-Hartley, Fraser A., Jompa, Jamaluddin, Kuo, Chao-Yang, Limmon, Gino Valentino, Lin, Yuting V., McClanahan, Timothy R., Muenzel, Dominic, Paddack, Michelle J., Planes, Serge, Pratchett, Morgan S., Radford, Ben, Reimer, James Davis, Richards, Zoe T., Ross, Claire L., Rulmal Jr., John, Sommer, Brigitte, Williams, GarethJ., and Wilson, Shaun K. (2023) Macroalgae exhibit diverse responses to human disturbances on coral reefs. Global Change Biology, 29 (12). pp. 3318-3330.

Bartelet, Henry A., Barnes, Michele L., and Cumming, Graeme S. (2023) Microeconomic adaptation to severe climate disturbances on Australian coral reefs. Ambio, 52. pp. 285-299.

McWilliam, Mike, Dornelas, Maria, Alvarez-Noriega, Mariana, Baird, Andrew H., Connolly, Sean R., and Madin, Joshua S. (2023) Net effects of life-history traits explain persistent differences in abundance among similar species. Ecology, 104 (1). e3863.

Ramírez-Calero, S., Paula, J.R., Otjacques, E., Ravasi, T., Rosa, R., and Schunter, C. (2023) Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions. BMC Biology, 21 (1). 258.

McCormick, M.I., Fakan, E.P., Vamvounis, G., Bosshard, S., Moad, C., Smyth, E., Gatenby, P., Edmiston, J., Patel, K., and Allan, B.J.M. (2023) No effects of plasticized microplastics on the body condition and reproduction of a marine fish. ICES Journal of Marine Science, 80 (5). pp. 1267-1276.

Wheeler, Carolyn R., Irschick, Duncan J., Mandelman, John W., and Rummer, Jodie L. (2023) Nonlethally assessing elasmobranch ontogenetic shifts in energetics. Journal of Fish Biology, 103 (2). pp. 235-246.

Trigo, Sandra, Narvaez, Pauline, Cardoso, Gonçalo C., and Soares, Marta C. (2023) Not so monochromatic: Size-dependency of both sex and color in the cleaner wrasse Labroides dimidiatus. Frontiers in Ecology and Evolution, 11. 1110079.

Gress Hernandez, Erika, Bridge, Tom, Fyfe, Justin, and Galbraith, Gemma (2023) Novel Interaction between a Rabbitfish and Black Corals. Oceans, 4. pp. 236-241.

Daly, Ryan, Venables, Stephanie K., Rogers, Toby D., Filmalter, John D., Hempson, Tessa N., Murray, Taryn S., Hussey, Nigel E., Silva Leal, Isabela, Pereira, Marcos A.M., Mann, Bruce Q., Nharreluga, Bilardo A.S., and Cowley, Paul D. (2023) Persistent transboundary movements of threatened sharks highlight the importance of cooperative management for effective conservation. Marine Ecology-Progress Series, 720. pp. 117-131.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Hughes, Terry P., Baird, Andrew H., Morrison, Tiffany H., and Torda, Gergely (2023) Principles for coral reef restoration in the anthropocene. One Earth, 6 (6). pp. 656-665.

Debaere, Shamil F., Weideli, Ornella C., Bouyoucos, Ian, Eustache, Kim B., Trujillo, José E., De Boeck, Gudrun, Planes, Serge, and Rummer, Jodie L. (2023) Quantifying changes in umbilicus size to estimate the relative age of neonatal blacktip reef sharks (Carcharhinus melanopterus). Conservation Physiology, 11 (1). coad028.

Downie, Adam T., Lefevre, Sjannie, Illing, Björn, Harris, Jessica, Jarrold, Michael D., McCormick, Mark I., Nilsson, Göran E., and Rummer, Jodie L. (2023) Rapid physiological and transcriptomic changes associated with oxygen delivery in larval anemonefish suggest a role in adaptation to life on hypoxic coral reefs. PLoS Biology, 21 (5). e3002102.

Cumming, Graeme S., Adamska, Maja, Barnes, Michele L., Barnett, Jon, Bellwood, David R., Cinner, Joshua E., Cohen, Philippa J., Donelson, Jennifer M., Fabricius, Katharina, Grafton, R. Quentin, Grech, Alana, Gurney, Georgina G., Hoegh-Guldberg, Ove, Hoey, Andrew S., Hoogenboom, Mia O., Lau, Jacqueline, Lovelock, Catherine E., Lowe, Ryan, Miller, David J., Morrison, Tiffany H., Mumby, Peter J., Nakata, Martin, Pandolfi, John M., Peterson, Garry D., Pratchett, Morgan S., Ravasi, Timothy, Riginos, Cynthia, Rummer, Jodie L., Schaffelke, Britta, Wernberg, Thomas, and Wilson, Shaun K. (2023) Research priorities for the sustainability of coral-rich western Pacific seascapes. Regional Environmental Change, 23 (2). 66.

Doll, Peter C., Uthicke, Sven, Caballes, Ciemon F., Diaz-Pulido, Guillermo, Abdul Wahab, Muhammad A., Jeong, So Young, Lang, Bethan J., and Pratchett, Morgan S. (2023) Settlement cue selectivity by larvae of the destructive crown-of-thorns starfish. Biology Letters, 19 (1). 20220399.

Mitchell, J.D., Drymon, J.M., Vardon, J., Coulson, P.G., Simpfendorfer, C.A., Scyphers, S.B., Kajiura, S.M., Hoel, K., Williams, S., Ryan, K.L., Barnett, A., Heupel, M.R., Chin, A., Navarro, M., Langlois, T., Ajemian, M.J., Gilman, E., Prasky, E., and Jackson, G. (2023) Shark depredation: future directions in research and management. Reviews in Fish Biology and Fisheries, 33. pp. 475-499.

Madin, Joshua S., Baird, Andrew H., Connolly, Sean R., Dornelas, Maria A., Alvarez-Noriega, Mariana, McWilliam, Michael J., Barbosa, Miguel, Blowes, Shane A., Cetina-Heredia, Paulina, Christie, Alec P., Cumbo, Vivian R., Diaz, Marcela, Emms, Madeleine A., Graham, Erin, Hansen, Dominique, Hisano, Mizue, Howells, Emily, Kuo, Chao-Yang, Palmer, Caroline, Hong, James Tan Chun, Zhi En Teo, Theophilus, and Woods, Rachael M. (2023) Six years of demography data for 11 reef coral species. Ecology and Evolution, 104 (5). e4017.

Zamborain-Mason, Jessica, Cinner, Joshua E., MacNeil, M. Aaron, Graham, Nicholas A.J., Hoey, Andrew S., Beger, Maria, Brooks, Andrew J., Booth, David J., Edgar, Graham J., Feary, David A., Ferse, Sebastian C.A., Friedlander, Alan M., Gough, Charlotte L.A., Green, Alison L., Mouillot, David, Polunin, Nicholas V.C., Stuart-smith, Rick D., Wantiez, Laurent, Williams, Ivor D., Wilson, Shaun K., and Connolly, Sean R. (2023) Sustainable reference points for multispecies coral reef fisheries. Nature Communications, 14 (1). 5368.

Kwong, Sarah Lok Ting, Villacorta Rath, Cecilia, Pratchett, Morgan, and Uthicke, Sven (2023) Telomere dynamics in the Pacific crown-of-thorns seastar (Acanthaster cf. solaris): effect of age, diet, and tissue type. Coral Reefs, 42. pp. 977-985.

Cumming, Graeme S., Davies, Zoe G., Fischer, Joern, and Hajjar, Reem (2023) Toward a pluralistic conservation science. Conservation Letters, 16 (3). e12952.

Seguin, Raphael, Mouillot, David, Cinner, Joshua E., Stuart-Smith, Rick D., Maire, Eva, Graham, Nicholas A.J., McLean, Matthew, Vigliola, Laurent, and Loiseau, Nicolas (2023) Towards process-oriented management of tropical reefs in the anthropocene. Nature Sustainability, 6. pp. 148-157.

Appert, Collette, Udyawer, Vinay, Simpfendorfer, Colin A., Heupel, Michelle R., Scott, Molly, Currey-Randall, Leanne M., Harborne, Alastair R., Jaine, Fabrice, and Chin, Andrew (2023) Use, misuse, and ambiguity of indices of residence in acoustic telemetry studies. Marine Ecology Progress Series, 714. pp. 27-44.

Pacey, Kai I., Caballes, Ciemon F., and Pratchett, Morgan S. (2023) Using size-weight relationships to estimate biomass of heavily targeted aquarium corals by Australia’s coral harvest fisheries. Scientific Reports, 13. 1448.

Takahashi, Miwa, Wakefield, Corey B., Newman, Stephen J., Hillcoat, Kyle B., Saunders, Benjamin J., and Harvey, Euan S. (2023) Utility of body and otolith morphometry to discriminate cryptic juveniles of two sympatric red snappers (Perciformes: Lutjanidae). Journal of Fish Biology, 103 (6). pp. 1312-1320.

O'Brien, Paul A., Tan, Shangjin, Frade, Pedro R., Robbins, Steven J., Engelberts, J. Pamela, Bell, Sara C., Vanwonterghem, Inka, Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2023) Validation of key sponge symbiont pathways using genome-centric metatranscriptomics. Environmental Microbiology, 25 (12). pp. 3207-3224.

Smallhorn-West, Patrick, Allison, Edward, Gurney, Georgina, Karnad, Divya, Kretser, Heidi, Lobo, Aaron Savio, Mangubhai, Sangeeta, Newing, Helen, Pennell, Kamille, Raj, Sushil, Tilley, Alexander, Williams, Haley, and Peckham, S. Hoyt (2023) Why human rights matter for marine conservation. Frontiers in Marine Science, 10. 1089154.

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Gordon, Sophie E., Goatley, Christopher H.R., and Bellwood, David R. (2016) Low-quality sediments deter grazing by the parrotfish Scarus rivulatus on inner-shelf reefs. Coral Reefs, 35 (1). pp. 285-291.

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Howells, E.J., Willis, B.L., Bay, L.K., and van Oppen, M.J.H. (2016) Microsatellite allele sizes alone are insufficient to delineate species boundaries in Symbiodinium. Molecular Ecology, 25 (12). pp. 2719-2723.

McClanahan, Timothy R., Maina, Joseph M., Graham, Nicholas A.J., and Jones, Kendall R. (2016) Modeling reef fish biomass, recovery potential, and management priorities in the Western Indian Ocean. PLoS One, 11 (5). pp. 1-21.

Schunter, Celia, Welch, Megan J., Ryu, Taewoo, Zhang, Huoming, Berumen, Michael L., Nilsson, Goeran E., Munday, Philip L., and Ravasi, Timothy (2016) Molecular signatures of transgenerational response to ocean acidification in a species of reef fish. Nature Climate Change, 6 (11). pp. 1014-1018.

Maciejewski, Kristine, and Cumming, Graeme S. (2016) Multi-scale network analysis shows scale-dependency of significance of individual protected areas for connectivity. Landscape Ecology, 31 (4). pp. 761-774.

van de Leemput, Ingrid A., Hughes, Terry P., van nes, Egbert H., and Scheffer, Marten (2016) Multiple feedbacks and the prevalence of alternate stable states on coral reefs. Coral Reefs, 35 (3). pp. 857-865.

Heenan, Adel, Hoey, Andrew S., Williams, Gareth J., and Williams, Ivor D. (2016) Natural bounds on herbivorous coral reef fishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 283 (1843). 20161716. pp. 1-9.

Moya, Aurelie, Howes, Ella L., Lacoue-Labarthe, Thomas, Foret, Sylvain, Hanna, Bishoy, Medina, Mónica, Munday, Philip L., Ong, Jue-Sheng, Teyssié, Jean-Louis, Torda, Gergely, Watson, Sue-Ann, Miller, David J., Bijma, Jelle, and Gattuso, Jean-Pierre (2016) Near-future pH conditions severely impact calcification, metabolism and the nervous system in the pteropod Heliconoides inflatus. Global Change Biology, 22 (12). pp. 3888-3900.

Cumming, Graeme S., Morrison, Tiffany H., and Hughes, Terrence P. (2016) New directions for understanding the spatial resilience of social–ecological systems. Ecosystems, 20 (4). pp. 649-664.

Albright, Rebecca, Anthony, Kenneth R.N., Baird, Mark, Beeden, Roger, Byrne, Maria, Collier, Catherine, Dove, Sophie, Fabricius, Katharina, Hoegh-Guldberg, Ove, Kelly, Ryan P., Lough, Janice, Mongin, Mathieu, Munday, Philip L., Pears, Rachel J., Russell, Bayden D., Tilbrook, Bronte, and Abal, Eva (2016) Ocean acidification: linking science to management solutions using the Great Barrier Reef as a case study. Journal of Environmental Management, 182. pp. 641-650.

Cazelles, Kévin, Mouquet, Nicolas, Mouillot, David, and Gravel, Dominique (2016) On the integration of biotic interaction and environmental constraints at the biogeographical scale. Ecography, 39 (10). pp. 921-931.

Mirbach, Christopher E., and Brandl, Simon J. (2016) Ontogenetic shifts in the social behaviour of pairing coral reef rabbitfishes (Siganidae). Marine Biology Research, 12 (8). pp. 874-880.

Hair, Cathy, Mills, David J., McIntyre, Rowan, and Southgate, Paul C. (2016) Optimising methods for community-based sea cucumber ranching: experimental releases of cultured juvenile Holothuria scabra into seagrass meadows in Papua New Guinea. Aquaculture Reports, 3. pp. 198-208.

Arias, Adrian, Pressey, Robert L., Jones, Rhondda E., Alvarez-Romero, Jorge G., and Cinner, Joshua E. (2016) Optimizing enforcement and compliance in offshore marine protected areas: a case study from Cocos Island, Costa Rica. Oryx, 50 (1). pp. 18-26.

Gurney, G.G., Cinner, J.E., Sartin, J., Pressey, R.L., Ban, N.C., Marshall, N.A., and Prabuning, D. (2016) Participation in devolved commons management: multiscale socioeconomic factors related to individuals' participation in community-based management of marine protected areas in Indonesia. Environmental Science & Policy, 61. pp. 212-220.

De Vos, Alta, Cumming, Graeme S., Cumming, David H.M., Ament, Judith M., Baum, Julia, Clements, Hayley S., Grewar, John D., Maciejewski, Kristine, and Moore, Christine (2016) Pathogens, disease, and the social-ecological resilience of protected areas. Ecology and Society, 21 (1). 20. pp. 1-26.

Bode, Michael, Williamson, David H., Weeks, Rebecca, Jones, Geoff P., Almany, Glenn R., Harrison, Hugo B., Hopf, Jess K., and Pressey, Robert L. (2016) Planning marine reserve networks for both feature representation and demographic persistence using connectivity patterns. PLoS ONE, 11 (5). pp. 1-23.

Leprieur, Fabien, Descombes, Patrice, Gaboriau, Théo, Cowman, Peter F., Parravicini, Valeriano, Kulbicki, Michel, Melián, Carlos J., de Santana, Charles N., Heine, Christian, Mouillot, David, Bellwood, David R., and Pellissier, Loïc (2016) Plate tectonics drive tropical reef biodiversity dynamics. Nature Communications, 7. 11461. pp. 1-8.

Ceccarelli, Daniela M., Emslie, Michael J., and Richards, Zoe T. (2016) Post-disturbance stability of fish assemblages measured at coarse taxonomic resolution masks change at finer scales. PLoS One, 11 (6). e0156232. pp. 1-22.

Munday, Philip L., Donelson, Jennifer M., and Domingos, Jose A. (2016) Potential for adaptation to climate change in a coral reef fish. Global Change Biology, 23 (1). pp. 307-317.

Clements, Hayley S., Cumming, Graeme S., and Kerley, Graham I.H. (2016) Predators on private land: broad-scale socioeconomic interactions influence large predator management. Ecology and Society, 21 (2). 45. pp. 1-9.

Abesamis, Rene A., Stockwell, Brian L., Bernardo, Lawrence P.C., Villanoy, Cesar L., and Russ, Garry R. (2016) Predicting reef fish connectivity from biogeographic patterns and larval dispersal modelling to inform the development of marine reserve networks. Ecological Indicators, 66. pp. 534-544.

Bauman, Andrew G., Dunshea, Glenn, Feary, David A., and Hoey, Andrew S. (2016) Prickly business: abundance of sea urchins on breakwaters and coral reefs in Dubai. Marine Pollution Bulletin, 105 (2). pp. 459-465.

Leahy, Susannah M., Russ, Garry R., and Abesamis, Rene A. (2016) Primacy of bottom-up effects on a butterflyfish assemblage. Marine and Freshwater Research, 67 (8). pp. 1175-1185.

Helmstedt, Kate J., Shaw, Justine D., Bode, Michael, Terauds, Aleks, Springer, Keith, Robinson, Susan A., and Possingham, Hugh P. (2016) Prioritizing eradication actions on islands: it's not all or nothing. Journal of Applied Ecology, 53. pp. 733-741.

Fabinyi, Michael (2016) Producing for Chinese luxury seafood value chains: different outcomes for producers in the Philippines and North America. Marine Policy, 63. pp. 184-190.

Visconti, Piero, Bakkenes, Michel, Baisero, Daniele, Brooks, Thomas, Butchart, Stuart H.M., Joppa, Lucas, Alkemade, Rob, Di Marco, Moreno, Santini, Luca, Hoffmann, Michael, Maiorano, Luigi, Pressey, Robert L., Arponen, Anni, Boitani, Luigi, Reside, April E., van Vuuren, Detlef P., and Rondinini, Carlo (2016) Projecting global biodiversity indicators under future development scenarios. Conservation Letters, 9 (1). pp. 5-13.

Moore, Christine, Grewar, John, and Cumming, Graeme S. (2016) Quantifying network resilience: comparison before and after a major perturbation shows strengths and limitations of network metrics. Journal of Applied Ecology, 53. pp. 636-645.

Ferrari, Renata, Bryson, Mitch, Bridge, Tom, Hustache, Julie, Williams, Stefan B., Byrne, Maria, and Figueira, Will (2016) Quantifying the response of structural complexity and community composition to environmental change in marine communities. Global Change Biology, 22 (5). pp. 1965-1975.

Leitão, Rafael P., Zuanon, Jansen, Villeger, Sebastien, Williams, Stephen E., Baraloto, Christopher, Fortunel, Claire, Mendonça, Fernando P., and Mouillot, David (2016) Rare species contribute disproportionately to the functional structure of species assemblages. Proceedings of the Royal Society of London Series B, Biological Sciences, 283 (1828). pp. 1-9.

Hoey, Andrew S., Howells, Emily, Johansen, Jacob L., Hobbs, Jean-Paul A., Messmer, Vanessa, Bradbury, Dominique M., Wilson, Shaun K., and Pratchett, Morgan S. (2016) Recent advances in understanding the effects of climate change on coral reefs. Diversity, 8 (2). 12. pp. 1-22.

Bay, Line K., Doyle, Jason, Logan, Murray, and Berkelmans, Raymond (2016) Recovery from bleaching is mediated by threshold densities of background thermo-tolerant symbiont types in a reef-building coral. Royal Society Open Science, 3 (6). 160322. pp. 1-10.

Goatley, C.H.R., González-Cabello, Alonso, and Bellwood, David R. (2016) Reef-scale partitioning of cryptobenthic fish assemblages across the Great Barrier Reef, Australia. Marine Ecology - Progress Series, 544. pp. 271-280.

Welch, Heather, Pressey, Robert L., Heron, Scott F., Ceccarelli, Daniela M., and Hobday, Alistair J. (2016) Regimes of chlorophyll-a in the Coral Sea: implications for evaluation adequacy of marine protected areas. Ecography, 39 (3). pp. 289-304.

Babcock, Russell C., Milton, David A., and Pratchett, Morgan S. (2016) Relationships between size and reproductive output in the crown‑of‑thorns starfish. Marine Biology, 163. 234. pp. 1-7.

Waldie, Peter A., Almany, Glenn R., Sinclair-Taylor, Tane H., Hamilton, Richard J., Potuku, Tapas, Priest, Mark A., Rhodes, Kevin, Robinson, Jan, Cinner, Joshua E., and Berumen, Michael L. (2016) Restricted grouper reproductive migrations support community-based management. Royal Society Open Science, 3. 150694. pp. 1-13.

Dale, Allan P., Vella, Karen, Pressey, Robert L., Brodie, Jon, Gooch, Margaret, Potts, Ruth, and Eberhard, Rachel (2016) Risk analysis of the governance system affecting outcomes in the Great Barrier Reef. Journal of Environmental Management, 183 (Part 3). pp. 712-721.

Suárez-Castillo, Alvin Noé, Torre, Jorge, Mancha-Cisneros, María del Mar, Álvarez-Romero, Jorge, and Espinosa-Romero, María José (2016) Ruta de sociabilización para integrar al sector productivo en el diseño de una red de zonas de recuperación pesquera en la Región de las Grandes Islas, Golfo de California. Ciencia Pesquera, 24 (2). pp. 65-79.

Reynolds, Chevonne, and Cumming, Graeme (2016) Seed traits and bird species influence the dispersal parameters of wetland plants. Freshwater Biology, 61 (7). pp. 1157-1170.

del Mar Palacios , Maria, Warren, Donald T., and McCormick, Mark I. (2016) Sensory cues of a top-predator indirectly control a reef fish mesopredator. Oikos, 125 (2). pp. 201-209.

Bellwood, David R., Goatley, Christopher H.R., Khan, Joanna A., and Tebbett, Sterling B. (2016) Site fidelity and homing in juvenile rabbitfishes (Siganidae). Coral Reefs, 35 (4). pp. 1151-1155.

Hicks, Christina C., Crowder, Larry B., Graham, Nicholas A.J., Kittinger, John, and Le Cornu, Elodie (2016) Social drivers forewarn of marine regime shifts. Frontiers in Ecology and the Environment, 14 (5). pp. 252-260.

Barnes, Michele L., Lynham, John, Kalberg, Kolter, and Leung, PingSun (2016) Social networks and environmental outcomes. Proceedings of the National Academy of Sciences of the United States of America, 113 (23). pp. 6466-6471.

Henry, Dominic A.W., and Cumming, Graeme S. (2016) Spatial and environmental processes show temporal variation in the structuring of waterbird metacommunities. Ecosphere, 7 (10). e01454. pp. 1-14.

Tan, C.H., Pratchett, M.S., Bay, L.K., Graham, E.M., and Baird, A.H. (2016) Spatial and temporal variation in fecundity among populations of Acropora millepora on the Great Barrier Reef. Marine Ecology Progress Series, 561. pp. 147-153.

Fuentes, Mariana M.P.B., Delean, Steven, Grayson, Jillian, Lavender, Sally, Logan, Murray, and Marsh, Helene (2016) Spatial and temporal variation in the effects of climatic variables on dugong calf production. PLoS One, 11 (6). pp. 1-14.

Arrigoni, Roberto, Berumen, Michael L., Chen, Chaolun Allen, Terraneo, Tullia I., Baird, Andrew H., Payri, Claude, and Benzoni, Francesca (2016) Species delimitation in the reef coral genera Echinophyllia and Oxypora (Scleractinia, Lobophylliidae) with a description of two new species. Molecular Phylogenetics and Evolution, 105. pp. 146-159.

Warner, Patricia A., Willis, Bette L., and Van Oppen, Madeleine (2016) Sperm dispersal distances estimated by parentage analysis in a brooding scleractinian coral. Molecular Ecology, 25 (6). pp. 1398-1415.

Evans, Louisa S., Hicks, Christina C., Adger, W. Neil, Barnett, Jon, Perry, Allison L., Fidelman, Pedro, and Tobin, Renae (2016) Structural and psycho-social limits to climate change adaptation in the Great Barrier Reef region. PLoS ONE, 11 (3). e0150575. pp. 1-17.

Ribas-Deulofeu, Lauriane, Denis, Vianney, De Palmas, Stéphane, Kuo, Chao-Yang, Hsieh, Hernyi Justin, and Chen, Chaolun Allen (2016) Structure of benthic communities along the Taiwan latitudinal gradient. PLoS ONE, 11 (8). e0160601. pp. 1-19.

Cheok, Jessica, Pressey, Robert L., Weeks, Rebecca, Andréfouët, Serge, and Moloney, James (2016) Sympathy for the devil: detailing the effects of planning-unit size, thematic resolution of reef classes, and socioeconomic costs on spatial priorities for marine conservation. PLoS One, 11 (11). E0164869. pp. 1-25.

Wendt, Hans K., Weeks, Rebecca, Comley, James, and Aalbersberg, William (2016) Systematic conservation planning within a Fijian customary governance context. Pacific Conservation Biology, 22 (2). pp. 173-181.

van de Water, Jeroen A.J.M., Lamb, Joleah B., Heron, Scott F., Van Oppen, Madeleine J.H., and Willis, Bette L. (2016) Temporal patterns in innate immunity parameters in reef-building corals and linkages with local climatic conditions. Ecosphere, 7 (11). e01505. pp. 1-16.

Laverick, Jack H., Andradi-Brown, Dominic A., Exton, Dan A., Bongaerts, Pim, Bridge, Tom C.L., Lesser, Michael P., Pyle, Richard L., Slattery, Marc, Wagner, Daniel, and Rogers, Alex D. (2016) To what extent do mesophotic coral ecosystems and shallow reefs share species of conservation interest? Environmental Evidence, 5 (16). pp. 1-8.

Turner, Rachel A., Addison, Jane, Arias, Adrian, Bergseth, Brock J., Marshall, Nadine A., Morrison, Tiffany H., and Tobin, Renae C. (2016) Trust, confidence, and equity affect the legitimacy of natural resource governance. Ecology and Society, 21 (3). 18.

Cohen, Philippa J., Lawless, Sarah, Dyer, Michelle, Morgan, Miranda, Saeni, Enly, Teioli, Helen, and Kantor, Paula (2016) Understanding adaptive capacity and capacity to innovate in social–ecological systems: applying a gender lens. Ambio, 45 (Supplement 3). pp. 309-321.

D'agata, Stéphanie, Vigliola, Laurent, Graham, Nicholas A.J., Wantiez, Laurent, Parravicini, Valeriano, Villéger, Sébastien, Mou-Tham, Gerard, Frolla, Philippe, Friedlander, Alan M., Kulbicki, Michel, and Mouillot, David (2016) Unexpected high vulnerability of functions in wilderness areas: evidence from coral reef fishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 283 (1844). 20160128. pp. 1-10.

Chacón, Adriana, Stoeckl, Natalie, Jarvis, Diane, and Pressey, Bob (2016) Using insights about key factors impacting 'quality of life' to inform effective on-farm conservation programs: a case study in Northern Australia. Australasian Journal of Environmental Management, 23 (4). pp. 338-355.

Adams, Vanessa M., Pressey, Robert L., and Álvarez-Romero, Jorge G. (2016) Using optimal land-use scenarios to assess trade-offs between conservation, development, and social values. PLoS ONE, 11 (6). e0158350.

Khan, J.A., Welsh, J.Q., and Bellwood, D.R. (2016) Using passive acoustic telemetry to infer mortality events in adult herbivorous coral reef fishes. Coral Reefs, 35 (2). pp. 411-420.

Samiei, Jahangir Vajed, Saleh, Abolfazl, Shirvani, Arash, Fumani, Neda Sheijooni, Hastroudi, Mehri, and Pratchett, Morgan Stuart (2016) Variation in calcification rate of Acropora downingi relative to seasonal changes in environmental conditions in the northeastern Persian Gulf. Coral Reefs, 35 (4). pp. 1371-1382.

Su, Ruixia, Lough, J.M., and Sun, Donghuai (2016) Variations in massive Porites growth rates at Hainan Island, northern South China Sea. Marine Ecology Progress Series, 546. pp. 47-60.

Correa, Adrienne M.S., Ainsworth, Tracy D., Rosales, Stephanie M., Thurber, Andrew R., Butler, Christopher R., and Thurber, Rebecca L. Vega (2016) Viral outbreak in corals associated with an in situ bleaching event: atypical herpes-like viruses and a new megavirus infecting Symbiodinium. Frontiers in Microbiology, 7. 127. pp. 1-14.

Belmar, Yasa N., McNamara, Karen E., and Morrison, Tiffany H. (2016) Water security in small island developing states: the limited utility of evolving governance paradigms. WIREs Water, 3 (2). pp. 181-193.

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Arrigoni, Roberto, Benzoni, Francesca, Huang, Danwei, Fukami, Hironobu, Chen, Chaolun Allen, Berumen, Michael L., Hoogenboom, Mia, Thompson, Damian, Hoeksema, Bert W., Budd, Ann F., Zayasu, Yuna, Terraneo, Tullia I., Kitano, Yuki F., and Baird, Andrew H. (2016) When forms meet genes: revision of the scleractinian genera Micromussa and Homophyllia (Lobophylliidae) with a description of two new species and one new genus. Contributions to Zoology, 85 (4). pp. 387-422.

Fredston-Hermann, Alexa, Brown, Christopher J., Albert, Simon, Klein, Carissa J., Mangubhai, Sangeeta, Nelson, Joanna L., Teneva, Lida, Wenger, Amelia, Gaines, Steven D., and Halpern, Benjamin S. (2016) Where does river runoff matter for coastal marine conservation? Frontiers in Marine Science, 3. 273. pp. 1-10.

Barnes, Megan D., Craigie, Ian D., Harrison, Luke B., Geldmann, Jonas, Collen, Ben, Whitmee, Sarah, Balmford, Andrew, Burgess, Neil D., Brooks, Thomas, Hockings, Marc, and Woodley, Stephen (2016) Wildlife population trends in protected areas predicted by national socio-economic metrics and body size. Nature Communications, 7. 12747. pp. 1-9.

Johnson, Martijn S., Kraver, Daniel W., Renshaw, Gillian M.C., and Rummer, Jodie L. (2016) Will ocean acidification affect the early ontogeny of a tropical oviparous elasmobranch (Hemiscyllium ocellatum)? Conservation Physiology, 4 (1). pp. 1-11.

Seymour, Colleen L., Joseph, Grant S., Makumbe, Milton, Cumming, Graeme S., Mahlangu, Zacheus, and Cumming, David H.M. (2016) Woody species composition in an African savanna: determined by centuries of termite activity but modulated by 50 years of ungulate herbivory. Journal of Vegetation Science, 27 (4). pp. 824-833.

Luomba, Joseph, Chuenpagdee, Ratana, and Song, Andrew M. (2016) A bottom-up understanding of illegal, unreported, and unregulated fishing in Lake Victoria. Sustainability, 8 (10). 1062. pp. 1-14.

Scheffers, Brett R., De Meester, Luc, Bridge, Tom C.L., Hoffmann, Ary A., Pandolfi, John M., Corlett, Richard T., Butchart, Stuart H.M., Pearce-Kelly, Paul, Kovacs, Kit M., Dudgeon, David, Pacifici, Michela, Rondinini, Carlo, Foden, Wendy B., Martin, Tara G., Mora, Camilo, Bickford, David, and Watson, James E.M. (2016) The broad footprint of climate change from genes to biomes to people. Science, 354 (6313). aaf7671-2. pp. 1-13.

Okubo, Nami, Hayward, David C., Foret, Sylvain, and Ball, Eldon E. (2016) A comparative view of early development in the corals Favia lizardensis, Ctenactis echinata, and Acropora millepora - morphology, transcriptome, and developmental gene expression. BMC Evolutionary Biology, 16. 48. pp. 1-12.

Madin, Joshua S., Anderson, Kristen D., Andreasen, Magnus Heide, Bridge, Tom C.L., Cairns, Stephen d., Connolly, Sean R., Darling, Emily S., Diaz, Marcela, Falster, Daniel S., Franklin, Erik C., Gates, Ruth, Hoogenboom, Mia O., Huang, Danwei, Keith, Sally A., Kosnik, Matthew A., Kuo, Chao-Yang, Lough, Janice M., Lovelock, Catherine E., Luiz, Osmar, Martinelli, Julieta, Mizerek, Toni, Pandolfi, John M., Pochon, Xavier, Pratchett, Morgan S., Putnam, Hollie M., Roberts, T. Edward, Stat, Michael, Wallace, Carden C., Widman, Elizabeth, and Baird, Andrew H. (2016) The coral trait database: a curated database of trait information for coral species from the global oceans. Scientific Data, 3. 160017. pp. 1-21.

Eriksson, Hampus, Adhuri, Dedi S., Adrianto, Luky, Andrew, Neil, Apriliani, Tenny, Daw, Tim, Evans, Louisa, Garces, Len, Kamanyi, Egidius, Mwaipopo, Rosemarie, Purnomo, Agus H., Sulu, Reuben J., and Beare, Doug J. (2016) An ecosystem approach to small-scale fisheries through participatory diagnosis in four tropical countries. Global Environmental Change, 36. pp. 56-66.

Daniel, Claire, Morrison, Tiffany, and Phinn, Stuart (2016) The governance of private residential land in cities and spatial effects on tree cover. Environmental Science & Policy, 62. pp. 79-89.

Montanari, Stefano R., Hobbs, Jean-Paul A., Pratchett, Morgan S., and Van Herwerden, Lynne (2016) The importance of ecological and behavioural data in studies of hybridisation among marine fishes. Reviews in Fish Biology and Fisheries, 26 (2). pp. 181-198.

Raymundo, M.L., and Caballes, C.F. (2016) An insight into bat hunter behavior and perception with implications for the conservation of the critically endangered Philippine bare-backed fruit bat. Journal of Ethnobiology, 36 (2). pp. 382-394.

Morrison, Tiffany H. (2016) The meta-governance of regions and the need for a political geography of planning. International Planning Studies, 21 (3). pp. 298-304.

Hernandez-Agreda, Alejandra, Leggat, William, Bongaerts, Pim, and Ainsworth, Tracy D. (2016) The microbial signature provides insight into the mechanistic basis of coral success across reef habitats. mBio, 7 (4). e00560-16. pp. 1-10.

Roberts, T. Edward, Bridge, Thomas C., Caley, M. Julian, and Baird, Andrew H. (2016) The point count transect method for estimates of biodiversity on coral reefs: improving the sampling of rare species. PLoS One, 11 (3). e0152335. pp. 1-10.

Cumming, Graeme S. (2016) The relevance and resilience of protected areas in the Anthropocene. Anthropocene, 13. pp. 46-56.

Caballes, Ciemon Frank, Pratchett, Morgan S., Kerr, Alexander M., and Rivera-Posada, Jairo A. (2016) The role of maternal nutrition on oocyte size and quality, with respect to early larval development in the coral-eating starfish, Acanthaster planci. PLoS ONE, 11 (6). e0158007. pp. 1-21.

Fabinyi, Michael, and Liu, Neng (2016) The social context of the Chinese food system: an ethnographic study of the Beijing seafood market. Sustainability, 8 (3). 244.

Iniesta-Arandia, Irene, Ravera, Federica, Buechler, Stephanie, Díaz-Reviriego, Isabel, Fernández-Giménez, María E., Reed, Maureen G., Thompson-Hall, Mary, Wilmer, Hailey, Aregu, Lemlem, Cohen, Philippa, Djoudi, Houria, Lawless, Sarah, Martín-López, Berta, Smucker, Thomas, Villamor, Grace B., and Wangui, Elizabeth Edna (2016) A synthesis of convergent reflections, tensions and silences in linking gender and global environmental change research. Ambio, 45 (Supplement 3). pp. 383-393.

Mohamed, A.R., Cumbo, V., Harii, S., Shinzato, C., Chan, C.X., Ragan, M.A., Bourne, D.G., Willis, B.L., Ball, E.E., Satoh, N., and Miller, D.J. (2016) The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome. Molecular Ecology, 25 (13). pp. 3127-3141.

Luiz, Osmar J., Madin, Elizabeth M.P., Madin, Joshua S., Baird, Andrew H., and Grutter, Alexandra S. (2016) A tropical cleaner wrasse finds new clients at the frontier. Frontiers in Ecology and the Environment, 14 (2). pp. 110-111.

Kiatkoski Kim, Milena, Evans, Louisa, Scherl, Lea M., and Marsh, Helene (2016) The user, not the tool: perceptions of credibility and relevance affect the uptake of prioritisation. Environmental Management, 57 (4). pp. 836-846.

Álvarez-Romero, Jorge G., Pressey, Robert L., Ban, Natalie C., and Brodie, Jon (2015) Advancing land-sea conservation planning: integrating modelling of catchments, land-use change, and river plumes to prioritise catchment management and protection. PLoS ONE, 10 (12). e0145574. pp. 1-26.

McClanahan, T.R., and Graham, N.A.J. (2015) Marine reserve recovery rates towards a baseline are slower for reef fish community life histories than biomass. Proceedings of the Royal Society of London Series B, Biological Sciences, 282 (1821). 20151938. pp. 1-10.

Maina, Joseph M., Jones, Kendall R., Hicks, Christina C., McClanahan, Tim R., Watson, James E.M., Tuda, Arthur O., and Andréfouët, Serge (2015) Designing climate-resilient marine protected area networks by combining remotely sensed coral reef habitat with coastal multi-use maps. Remote Sensing, 7 (12). pp. 16571-16587.

Krueger, Thomas, Hawkins, Thomas D., Becker, Susanne, Pontasch, Stefanie, Dove, Sophie, Hoegh-Guldberg, Ove, Leggat, William, Fisher, Paul L., and Davy, Simon K. (2015) Differential coral bleaching-contrasting the activity and response of enzymatic antioxidants in symbiotic partners under thermal stress. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 190. pp. 15-25.

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Gravel, Dominique, Poisot, Timothée, Albouy, Camille, Velez, Laure, and Mouillot, David (2013) Inferring food web structure from predator-prey body size relationships. Methods in Ecology and Evolution, 4 (11). pp. 1083-1090.

Dabruzzi, Theresa F., Bennett, Wayne A., Rummer, Jodie L., and Fangue, Nann A. (2013) Juvenile ribbontail stingray, Taeniura lymma (ForsskAyenl, 1775) (Chondrichthyes, Dasyatidae), demonstrate a unique suite of physiological adaptations to survive hyperthermic nursery conditions. Hydrobiologia, 701 (1). pp. 37-49.

Cinner, Joshua E., MacNeil, M. Aaron, Basurto, Xavier, and Gelcich, Stefan (2013) Looking beyond the fisheries crisis: Cumulative learning from small-scale fisheries through diagnostic approaches. Global Environmental Change, 23 (6). pp. 1359-1365.

Andrello, Marco, Mouillot, David, Beuvier, Jonathan, Albouy, Camille, Thuiller, Wilfried, and Manel, Stéphanie (2013) Low connectivity between Mediterranean marine protected areas: a biophysical modeling approach for the dusky grouper Epinephelus marginatus. PLoS ONE, 8 (7). e68564. pp. 1-15.

Alvarez-Romero, Jorge, Pressey, Robert L., Ban, Natalie C., Torre-Cosio, Jorge, and Aburto-Oropeza, Octavio (2013) Marine conservation planning in practice: lessons learned from the Gulf of California. Aquatic Conservation: marine and freshwater ecosystems , 23 (4). pp. 483-505.

Ceh, Janja, Kilburn, Matt R., Cliff, John B., Raina, Jean-Baptiste, van Keulen, Mike, and Bourne, David G. (2013) Nutrient cycling in early coral life stages: Pocillopora damicornis larvae provide their algal symbiont (Symbiodinium) with nitrogen acquired from bacterial associates. Ecology and Evolution, 3 (8). pp. 2393-2400.

Trapon, M.L., Pratchett, M.S., Adjeroud, M., Hoey, A.S., and Baird, A.H. (2013) Post-settlement growth and mortality rates of juvenile scleractinian corals in Moorea, French Polynesia versus Trunk Reef, Australia. Marine Ecology Progress Series, 488. pp. 157-170.

Albouy, Camille, Guilhaumon, François, Leprieur, Fabien, Lasram, Frida Ben Rais, Somot, Samuel, Aznar, Roland, Velez, Laure, Le Loc'h, Francois, and Mouillot, David (2013) Projected climate change and the changing biogeography of coastal Mediterranean fishes. Journal of Biogeography, 40 (3). pp. 534-547.

Wen, Colin K.C., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., Mannering, Thomas D., Evans, Richard D., Leis, Jeffrey M., Srinivasan, Maya, and Jones, Geoffrey P. (2013) Recruitment hotspots boost the effectiveness of no-take marine reserves. Biological Conservation, 166. pp. 124-131.

Ban, S.S., Graham, N.A.J., and Connolly, S.R. (2013) Relationships between temperature, bleaching and white syndrome on the Great Barrier Reef. Coral Reefs, 32 (1). pp. 1-12.

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Torda, G., Lundgren, P., Willis, B. L., and van Oppen, M.J.H. (2013) Revisiting the connectivity puzzle of the common coral Pocillopora damicornis. Molecular Ecology, 22 (23). pp. 5805-5820.

Wen, Colin K.C., Pratchett, Morgan S., Almany, Glenn R., and Jones, Geoffrey P. (2013) Role of prey availability in microhabitat preferences of juvenile coral trout (Plectropomus: Serranidae). Journal of Experimental Marine Biology and Ecology, 443. pp. 39-45.

Rummer, Jodie L., McKenzie, David J., Innocenti, Alessio, Supuran, Claudiu T., and Brauner, Colin J. (2013) Root effect hemoglobin may have evolved to enhance general tissue oxygen delivery. Science, 340 (6138). pp. 1327-1329.

Cariglia, Nicoletta, Wilson, Shaun K., Graham, Nicholas A.J., Fisher, Rebecca, Robinson, Jan, Aumeeruddy, Riaz, Quatre, Rodney, and Polunin, Nicholas V.C. (2013) Sea cucumbers in the Seychelles: effects of marine protected areas on high-value species. Aquatic Conservation, 23 (3). pp. 418-428.

Coker, Darren J., Walker, Stefan P.W., Munday, Philip L., and Pratchett, Morgan S. (2013) Social group entry rules may limit population resilience to patchy habitat disturbance. Marine Ecology Progress Series, 493. pp. 237-242.

Bijoux, Jude, Dagorn, Laurent, Cowley, Paul D., Simier, Monique, Adam, Pierre-André, and Robinson, Jan (2013) Spawning aggregation dynamics of brown-marbled grouper and camouflage grouper at a remote Indian Ocean atoll. Endangered Species Research, 22 (2). pp. 145-157.

Couturier, Christine S., Stecyk, Jonathan A.W., Rummer, Jodie L., Munday, Philip L., and Nilsson, Göran E. (2013) Species-specific effects of near-future CO₂ on the respiratory performance of two tropical prey fish and their predator. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 166 (3). pp. 482-489.

Januchowski-Hartley, Fraser, Graham, Nicholas A.J., Cinner, Joshua E., and Russ, Garry R. (2013) Spillover of fish naïveté from marine reserves. Ecology Letters, 16 (2). pp. 191-197.

Yuen, Yeong Shyan, Yamazaki, Seitaro S., Baird, Andrew H., Nakamura, Takashi, and Yamasaki, Hideo (2013) Sulfate-reducing bacteria in the skeleton of the massive coral Goniastrea aspera from the Great Barrier Reef. Galaxea, Journal of Coral Reef Studies, 15 (Special Issue). pp. 154-159.

Mills, Morena, Pressey, Robert L., Ban, Natalie C., Foale, Simon, Aswani, Shankar, and Knight, Andrew T. (2013) Understanding characteristics that define the feasibility of conservation actions in a common pool marine resource governance system. Conservation Letters, 6 (6). pp. 418-429.

Arias, Adrian, and Sutton, Stephen G. (2013) Understanding recreational fishers' compliance with no-take zones in the Great Barrier Reef Marine Park. Ecology and Society, 18 (4). 18. pp. 1-9.

Fuentes, M.M.P.B., and Porter, W.P. (2013) Using a microclimate model to evaluate impacts of climate change on sea turtles. Ecological Modelling, 251. pp. 150-157.

Bell, Johann, Ganachaud, Alexandre, Gehrke, Peter, Hoegh-Guldberg, Ove, Johnson, Johanna, Le Borgne, Robert, Lough, Janice, Pickering, Tim, Pratchett, Morgan, Sikivou, Mosese, and Waycott, Michelle (2013) Vulnerability of fisheries and aquaculture to climate change in Pacific Island countries and territories. FAO Fisheries and Aquaculture Proceedings, 28. pp. 25-106.

Hamada, Mayuko, Shoguchi, Eiichi, Shinzato, Chuya, Kawashima, Takeshi, Miller, David J., and Satoh, Nori (2013) The complex NOD-like receptor repertoire of the coral Acropora digitifera includes novel domain combinations. Molecular Biology and Evolution, 30 (1). pp. 167-176.

Lukoschek, Vimoksalehi, Cross, Peter, Torda, Gergely, Zimmerman, Rachel, and Willis, Bette L. (2013) The importance of coral larval recruitment for the recovery of reefs impacted by Cyclone Yasi in the central Great Barrier Reef. PLoS ONE, 8 (6). e65363. pp. 1-11.

Levy, Jessica S., and Ban, Natalie C. (2013) A method for incorporating climate change modelling into marine conservation planning: an Indo-west Pacific example. Marine Policy, 38. pp. 16-24.

Dale, Allan, Vella, Karen, Pressey, Robert L., Brodie, Jon, Yorkston, Hugh, and Potts, Ruth (2013) A method for risk analysis across governance systems: a Great Barrier Reef case study. Environmental Research Letters, 8 (1). 015037. pp. 1-16.

Pressey, Robert L., Mills, Morena, Weeks, Rebecca, and Day, Jon C. (2013) The plan of the day: managing the dynamic transition from regional conservation designs to local conservation actions. Biological Conservation, 166. pp. 155-169.

Thuiller, Wilfried, Münkenmüller, Tamara, Lavergne, Sébastien, Mouillot, David, Mouquet, Nicolas, Schiffers, Katja, and Gravel, Dominique (2013) A road map for integrating eco-evolutionary processes into biodiversity models. Ecology Letters, 16 (S1). pp. 94-105.

Ramos-Silva, Paula, Kaandorp, Jaap, Huisman, Lotte, Marie, Benjamin, Zanella-Cléon, Isabelle, Guichard, Nathalie, Miller, David J., and Marin, Frédéric (2013) The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling. Molecular Biology and Evolution, 30 (9). pp. 2099-2112.

Berumen, M.L., Hoey, A.S., Bass, W.H., Bouwmeester, J., Catania, D., Cochran, J.E.M., Khalil, M.T., Miyake, S., Mughal, M.R., Spaet, J.L.Y., and Saenz-Agudelo, P. (2013) The status of coral reef ecology research in the Red Sea. Coral Reefs, 32 (3). pp. 737-748.

Basset, Alberto, Barbone, Enrico, Elliott, Michael, Li, Bai-Lian, Jorgensen, Sven Eric, Lucena-Moya, Paloma, Pardo, Isabel, and Mouillot, David (2013) A unifying approach to understanding transitional waters: fundamental properties emerging from ecotone ecosystems. Estuarine, Coastal and Shelf Science , 132. pp. 5-16.

Reyes-Bermudez, Alejandro, Miller, David J., and Sprungala, Susanne (2012) The neuronal calcium sensor protein acrocalcin: a potential target of calmodulin regulation during development in the coral Acropora millepora. PLoS ONE, 7 (12). 0051689. pp. 1-8.

Schmidt-Roach, Sebastian, Miller, Karen J., Woolsey, Erika, Gerlach, Gabriele, and Baird, Andrew H. (2012) Broadcast spawning by Pocillopora species on the Great Barrier Reef. PLoS ONE, 7 (12). e50847. e50847.

Donelson, Jennifer, Munday, Philip, McCormick, Mark, and Pitcher, C.R. (2012) Rapid transgenerational acclimation of a tropical reef fish to climate change. Nature Climate Change, 2. pp. 30-32.

Puill-Stephan, E., Willis, B.L., Abrego, D., Raina, J-B., and van Oppen, M.J.H. (2012) Allorecognition maturation in the broadcast-spawning coral Acropora millepora. Coral Reefs, 31 (4). pp. 1019-1028.

Baird, Andrew, Sommer, Brigitte, and Madin, Joshua (2012) Pole-ward range expansion of Acropora spp. along the east coast of Australia. Coral Reefs, 31 (4). p. 1063.

Carpenter, Stephen R., Arrow, Kenneth J., Barrett, Scott, Biggs, Reinette, Brock, William A., Crepin, Anne-Sophie, Engstrom, Gustov, Folke, Carl, Hughes, Terry P., Kautsky, Nils, Li, Chuan-Zhong, McCarney, Geoffrey, Meng, Kyle, Maler, Karl-Goran, Polasky, Stephen, Scheffer, Marten, Shogren, Jason, Sterner, Thomas, Vincent, Jeffrey R., Walker, Brian, Xepapadeas, Anastasios, and de Zeeuw, Aart (2012) General resilience to cope with extreme events. Sustainability, 4 (12). pp. 3248-3259.

Wen, Colin K., Almany, Glenn R., Williamson, David H., Pratchett, Morgan S., and Jones, Geoffrey P. (2012) Evaluating the effects of marine reserves on diet, prey availability and prey selection by juvenile predatory fishes. Marine Ecology Progress Series, 469. pp. 133-144.

Januchowski-Hartley, Fraser, Nash, Kirsty, and Lawton, Rebecca (2012) Influence of spear guns, dive gear and observers on estimating fish flight initiation distance on coral reefs. Marine Ecology Progress Series, 469. pp. 113-119.

Rivera-Posada, Jairo, Owens, Leigh, Caballes, Ciemon F., and Pratchett, Morgan (2012) The role of protein extracts in the induction of disease in Acanthaster planci. Journal of Experimental Marine Biology and Ecology, 429. pp. 1-6.

Purcell, Steven W., Hair, Cathy A., and Mills, David J. (2012) Sea cucumber culture, farming and sea ranching in the tropics: progress, problems and opportunities. Aquaculture, 368-369. pp. 68-81.

Munday, Philip L., McCormick, Mark I., Meekan, Mark, Dixson, Danielle L., Watson, Sue-Ann, Chivers, Douglas P., and Ferrari, Maud C.O. (2012) Selective mortality associated with variation in CO2 tolerance in a marine fish. Ocean Acidification, 1 (1). pp. 1-5.

Biggs, Reinette, Schluter, Maja, Biggs, Duan, Bohensky, Erin L., BurnSilva, Shauna, Cundill, Georgina, Dakos, Vasilis, Daw, Tim D., Evans, Louisa S., Kotschy , Karen, Leitch, Anne M., Meek, Chanda, Quinlan, Allyson, Raudsepp-Hearne, Ciara, Robards, Martin D., Schoon, Michael L., Schultz, Lizen, and West, Paul C. (2012) Toward principles for enhancing the resilience of ecosystem services. Annual Review of Environment and Resources, 37. pp. 421-448.

Campbell, Stuart, Cinner, Joshua, Ardiwijaya, Rizya, Pardede, Shinta, Kartawijaya, Tasrif, Mukminin, Ahmad, Herdiana, Yudi, Hoey, Andrew S., Pratchett, Morgan, and Baird, Andrew (2012) Avoiding conflicts and protecting coral reefs: Customary management benefits marine habitats and fish biomass. Oryx, 46 (4). 486-494 .

Rudi, Edi, Campbell, Stuart J., Hoey, Andrew S., Fadli, Nur, Linkie, Matthew, and Baird, Andrew H. (2012) The Coral Triangle Initiative: What are we missing? A case study from Aceh. Oryx, 46 (4). 482-485.

Bellwood, David R., Baird, Andrew H., Depczynski, Martial, González-Cabello, Alonso, Hoey, Andrew S., Lefevre, Carine D., and Tanner, Jennifer K. (2012) Coral recovery may not herald the return of fishes on damaged coral reefs. Oecologia, 170 (2). 1- 7.

Palmer, C. V., Graham, E., and Baird, A. H. (2012) Immunity through early development of coral larvae. Developmental and Comparative Immunology, 38 (2). pp. 395-399.

Cohen, Philippa J., Evans, Louisa S., and Mills, Morena (2012) Social networks supporting governance of coastal ecosystems in Solomon Islands. Conservation Letters, 5 (5). pp. 376-386.

Fadli, Nur, Campbell, Stuart J., Ferguson, Kathryn, Keyse, Jude, Rudi, Edi, Riedel, Arthur, and Baird, Andrew H. (2012) The role of habitat creation in coral reef conservation: a case study from Aceh, Indonesia. Oryx, 46 (4). pp. 501-507.

Sprenger, Dennis, Dingemanse, Niels J., Dochtermann, Ned A., Theobald, Jennifer, and Walker, Stefan P.W. (2012) Aggressive females become aggressive males in a sex-changing reef fish. Ecology Letters, 15 (9). pp. 986-992.

Figueiredo, Joana, and Connolly, Sean R. (2012) Dispersal-mediated coexistence under recruitment limitation and displacement competition. Ecological Modelling, 243. pp. 133-142.

Pratchett, Morgan S., Coker, Darren J., Jones, Geoffrey P., and Munday, Philip L. (2012) Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss. Ecology and Evolution, 2 (9). pp. 2168-2180.

Kuo, Chao-yang, Yuen, Yeong Shyan, Meng, Pei-Jie , Ho, Ping-Ho , Wang, Jih-Terng, Liu, Pi-Jen, Chang, Yang-Chi, Dai, Chang-Feng , Fan, Tung-Yung , Lin, Hsing-Juh, Baird, Andrew Hamilton, and Chen, Chaolun Allen (2012) Recurrent disturbances and the degradation of hard coral communities in Taiwan. PLoS ONE, 7 (8). 44364. e44364- .

McClanahan, Tim R., Donner, Simon D., Maynard, Jeffrey A., MacNeil, M. Aaron, Graham, Nicholas A.J., Maina, Joseph, Baker, Andrew C., Alemu, Jahson B., Beger, Maria, Campbell, Stuart J., Darling, Emily S., Eakin, C. Mark, Heron, Scott F., Jupiter, Stacy D., Lundquist, Carolyn J., McLeod, Elizabeth, Mumby, Peter J., Paddack, Michelle J., Selig, Elizabeth R., and van Woesik, Robert (2012) Prioritizing key resilience indicators to support coral reef management in a changing climate. PLoS ONE, 7 (8). e42884. pp. 1-7.

Horigue, Vera, Aliño, Porfirio M., White, Alan T., and Pressey, Robert L. (2012) Marine protected area networks in the Philippines: trends and challenges for establishment and governance. Ocean & Coastal Management, 64. pp. 15-26.

Chong-Seng, Karen M., Mannering, Thomas D., Pratchett, Morgan S., Bellwood, David R., and Graham, Nicholas A.J. (2012) The influence of coral reef benthic condition on associated fish assemblages. PLoS ONE, 7 (8). e42167. pp. 1-10.

Van Wynsberge, Simon, Andrefouet, Serge, Hamel, Mélanie A., and Kulbicki, Michel (2012) Habitats as surrogates of taxonomic and functional fish assemblages in coral reef ecosystems: a critical analysis of factors driving effectiveness. PLoS ONE, 7 (7). e40997. pp. 1-11.

Villéger, Sebastien, Miranda, Julia Ramos, Hernandez, Domingo Flores, and Mouillot, David (2012) Low functional β-diversity despite high taxonomic beta-diversity among tropical estuarine fish communities. PLoS ONE, 7 (7). e40679. pp. 1-10.

Dixson, Danielle L., Pratchett, Morgan S., and Munday, Philip L. (2012) Reef fishes innately distinguish predators based on olfactory cues associated with recent prey items rather than individual species. Animal Behaviour, 84 (1). pp. 45-51.

Nash, Kirsty L., Graham, Nicholas A.J., Januchowski-Hartley, Fraser A., and Bellwood, David R. (2012) Influence of habitat condition and competition on foraging behaviour of parrotfishes. Marine Ecology Progress Series, 457. pp. 113-124.

Noonan, Sam H.C., Jones, Geoffrey P., and Pratchett, Morgan S. (2012) Coral size, health and structural complexity: effects on the ecology of a coral reef damselfish. Marine Ecology Progress Series, 456. pp. 127-137.

Lawton, Rebecca J., and Pratchett, Morgan S. (2012) Influence of dietary specialization and resource availability on geographical variation in abundance of butterflyfish. Ecology and Evolution, 2 (7). pp. 1347-1361.

Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., and Jones, Geoffrey P. (2012) Larval export from marine reserves and the recruitment benefit for fish and fisheries. Current Biology, 22 (11). pp. 1023-1028.

Figueiredo, Joana, Lin, Junda, Anto, Justin, and Narciso, Luís (2012) The consumption of DHA during embryogenesis as an indicative of the need to supply DHA during early larval development: a review. Journal of Aquaculture Research and Development, 3 (5). 140. pp. 1-7.

Lawton, Rebecca J., Cole, Andrew J., Berumen, Michael L., and Pratchett, Morgan S. (2012) Geographic variation in resource use by specialist versus generalist butterflyfishes. Ecography, 35 (6). pp. 566-576.

Lukoschek, Vimoksalehi, and Shine, Richard (2012) Sea snakes rarely venture far from home. Ecology and Evolution, 2 (6). pp. 1113-1121.

Münkemüller, T., de Bello, F., Meynard, C.N., Gravel, D., Lavergne, S., Mouillot, D., Mouquet, N., and Thuiller, W. (2012) From diversity indices to community assembly processes: a test with simulated data. Ecography, 35 (5). pp. 468-480.

Albernaz, Ana Luisa, Pressey, Robert L., Costa, Luiz R.F., Moreira, Marcelo P., Ramos, Jose Ferreira, Assuncao, Paulo A., and Franciscon, Carlos H. (2012) Tree species compositional change and conservation implications in the white-water flooded forests of the Brazilian Amazon. Journal of Biogeography, 39 (5). pp. 869-883.

Moya, A., Huisman, L., Ball, E.E., Hayward, D.C., Grasso, L.C., Chua, C.M., Woo, H.N., Gattuso, J.-P, Forêt, S., and Miller, D.J. (2012) Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO2-driven acidification during the initiation of calcification. Molecular Ecology, 21 (10). pp. 2440-2454.

Andrefouet, Serge, Hamel, Mélanie A., and Dalleau, Mayeul (2012) Distinction between effective pattern-based and selection-based biodiversity surrogates is essential: caveats for managers. Marine Ecology Progress Series, 452. pp. 287-295.

Villeger, Sebastien, Ferraton, Franck, Mouillot, David, and de Wit, Rutger (2012) Nutrient recycling by coastal macrofauna: intra- versus interspecific differences. Marine Ecology Progress Series, 452. pp. 297-303.

Hughes, Terry P., Baird, Andrew H., Dinsdale, Elizabeth A., Moltschaniwskyj, Natalie A., Pratchett, Morgan S., Tanner, Jason E., and Willis, Bette L. (2012) Assembly rules of reef corals are flexible along a steep climatic gradient. Current Biology, 22 (8). pp. 736-741.

Hamel, Mélanie A., and Andrefouet, Serge (2012) Biodiversity-based propositions of conservation areas in Baa Atoll, Republic of Maldives. Atoll Research Bulletin, 590. pp. 223-235.

Andrefouet, Serge, Rilwan, Yossuf, and Hamel, Mélanie A. (2012) Habitat mapping for conservation planning in Baa Atoll, Republic of Maldives. Atoll Research Bulletin, 590. 10. pp. 207-222.

Cinner, Joshua E., McClanahan, Tim R., MacNeil, M. Aaron, Graham, Nicholas A.J., Daw, Tim M., Mukminin, Ahmad, Feary, David A., Rabearisoa, Ando L., Wamukota, Andrew, Jiddawi, Narriman, Campbell, Stuart J., Baird, Andrew H., Januchowski-Hartley, Fraser A., Hamed, Salum, Lahari, Rachael, Morove, Tau, and Kuange, John (2012) Comanagement of coral reef social-ecological systems. Proceedings of the National Academy of Sciences of the United States of America, 109 (14). pp. 5219-5222.

Cole, Andrew J., Lawton, Rebecca J., Wilson, Shaun K., and Pratchett, Morgan S. (2012) Consumption of tabular acroporid corals by reef fishes: a comparison with plant–herbivore interactions. Functional Ecology, 26 (2). pp. 307-316.

Adams, Vanessa M., Pressey, Robert L., and Stoeckl, Natalie (2012) Estimating land and conservation management costs: the first step in designing a stewardship program for the Northern Territory. Biological Conservation, 148 (1). pp. 44-53.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2012) Influence of coral bleaching, coral mortality and conspecific aggression on movement and distribution of coral-dwelling fish. Journal of Experimental Marine Biology and Ecology, 414-415. pp. 62-68.

Wamukota, A.W., Cinner, J.E., and McClanahan, T.R. (2012) Co-management of coral reef fisheries: a critical evaluation of the literature. Marine Policy, 36 (2). pp. 481-488.

Guest, James, Baird, Andrew, Maynard, Jeffrey, Muttaqin, Efin, Edwards, Alasdair, Campbell, Stuart, Yewdall, Katie, Affendi, Yang Amri, and Chou, Loke Ming (2012) Contrasting Patterns of Coral Bleaching Susceptibility in 2010 Suggest an Adaptive Response to Thermal Stress. PLoS ONE, 7 (3). e33353- .

Lukoschek, Vimoksalehi, and Avise, John C. (2012) Development of eleven polymorphic microsatellite loci for the sea snake Emydocephalus annulatus (Elapidae: Hydrophiinae) and cross-species amplification for seven species in the sister genus Aipysurus. Conservation Genetics Resources, 4 (1). pp. 11-14.

Berumen, M.L., Trip, E.D.L., Pratchett, M.S., and Choat, J.H. (2012) Differences in demographic traits of four butterflyfish species between two reefs of the Great Barrier Reef separated by 1,200 km. Coral Reefs, 31 (1). pp. 169-177.

Fabinyi, Michael (2012) Historical, cultural and social perspectives on luxury seafood consumption in China. Environmental Conservation, 39 (1). pp. 83-92.

Ban, Natalie C., Cinner, Joshua E., Adams, Vanessa M., Mills, Morena, Almany, Glenn R., Ban, Stephen S., McCook, Laurence J., and White, Alan (2012) Recasting shortfalls of marine protected areas as opportunities through adaptive management. Aquatic Conservation: marine and freshwater ecosystems , 22 (2). pp. 262-271.

Bonin, M.C. (2012) Specializing on vulnerable habitat: Acropora selectivity among damselfish recruits and the risk of bleaching-induced habitat loss. Coral Reefs, 31 (1). pp. 287-297.

Baird, Andrew H., Campbell, Stuart J., Fadli, Nur, Hoey, Andrew S., and Rudi, Edi (2012) The shallow water hard corals of Pulau Weh, Aceh Province, Indonesia. Aquaculture, Aquarium, Conservation and Legislation, 5 (1). pp. 23-28.

Ban, Natalie C., Pressey, Robert L., and Weeks, Scarla (2012) Conservation objectives and sea-surface temperature anomalies in the Great Barrier Reef. Conservation Biology, 26 (5). pp. 799-809.

Bottrill, Madeleine C., Mills, Morena, Pressey, Robert L., Game, Edward T., and Groves, Craig (2012) Evaluating perceived benefits of ecoregional assessments. Conservation Biology, 26 (5). pp. 851-861.

Muller, Erinn M., Raymundo, Laurie J., Willis, Bette L., Haapkylä, Jessica, Yusuf, Syafyudin, Wilson, Joanne R., and Harvell, Drew C. (2012) Coral health and disease in the Spermonde Archipelago and Wakatobi, Sulawesi. Journal of Indonesian Coral Reefs, 1 (3). pp. 147-159.

Berumen, Michael L., Almany, Glenn R., Planes, Serge, Jones, Geoffrey P., Saenz-Agudelo, Pablo, and Thorrold, Simon R. (2012) Persistence of self-recruitment and patterns of larval connectivity in a marine protected area network. Ecology and Evolution, 2 (2). pp. 444-452.

Madin, Elizabeth, Ban, Natalie C., Doubleday, Zoë A., Holmes, Thomas H., Pecl, Gretta T., and Smith, Franz (2012) Socio-economic and management implications of range-shifting species in marine systems. Global Environmental Change, 22 (1). pp. 137-146.

Daw, Tim M., Cinner, Joshua E., McClanahan, Timothy R., Brown, Katrina, Stead, Selina M., Graham, Nicholas A.J., and Maina, Jospeh (2012) To fish or not to fish: factors at multiple scales affecting artisanal fishers' readiness to exit a declining fishery. PLoS ONE, 7 (2). e31460. pp. 1-10.

Cinner, J.E., McClanahan, T.R., Graham, N.A.J., Daw, T.M., Maina, J., Stead, S.M., Wamukota, A., Brown, K., and Bodin, Ö. (2012) Vulnerability of coastal communities to key impacts of climate change on coral reef fisheries. Global Environmental Change, 22 (1). pp. 12-20.

Lawton, Rebecca J., Pratchett, Morgan S., and Berumen, Michael L. (2012) The use of specialisation indices to predict vulnerability of coral-feeding butterflyfishes to environmental change. Oikos, 121 (2). pp. 191-200.

Sheppard, C.R.C., Ateweberhan, M., Bowen, B.W., Carr, P., Chen, C.A., Clubbe, C., Craig, M.T., Ebinghaus, R., Eble, J., Fitzsimmons, N., Gaither, M.R., Gan, C-H., Gollock, M., Guzman, N., Graham, N.A.J., Harris, A., Jones, R., Keshavmurthy, S., Koldewey, H., Lundin, C.G., Mortimer, J.A., Obura, D., Pfeiffer, M., Price, A.R.G., Purkis, S., Raines, P., Readman, J.W., Riegl, B., Rogers, A., Schleyer, M., Seaward, M.R.D., Sheppard, A.L.S., Tamelander, J., Turner, J.R., Visram, S., Vogler, C., Vogt, S., Wolschke, H., Yang, J. M-C., Yang, S-Y., and Yesson, C. (2012) Reefs and islands of the Chagos Archipelago, Indian Ocean: why it is the world's largest no-take marine protected area. Aquatic Conservation: marine and freshwater ecosystems , 22 (2). pp. 232-261.

Foster, Ralph, Bridge, Thomas, and Bongaerts, Pim (2012) The first record of Hippocampus denise (Syngnathidae) from Australia. Aqua: International Journal of Ichthyology, 18 (1). pp. 55-57.

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Fidelman, Pedro, Evans, Louisa, Fabinyi, Michael, Foale, Simon, Cinner, Josh, and Rosen, Franciska (2012) Governing large-scale marine commons: contextual challenges in the Coral Triangle. Marine Policy, 36 (1). pp. 42-53.

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Hughes, Terry (2011) The future of marine governance. Solutions, 2 (1). pp. 1-3.

Janiszewska, Katarzyna, Stolarski, Jarosław, Benzerara, Karim, Meibom, Anders, Mazur, Maciej, Kitahara, Marcelo V., and Cairns, Stephen D. (2011) A unique skeletal microstructure of the deep-sea micrabaciid scleractinian corals. Journal of Morphology, 272 (2). pp. 191-203.

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Steneck, R.S., Hughes, T.P., Cinner, J.E., Adger, W.N., Arnold, S.N., Berkes, F., Boudreau, S.A., Brown, K., Folke, C., Gunderson, L., Olsson, P., Scheffer, M., Stephenson, E., Walker, B., Wilson, J., and Worm, B. (2011) Creation of a gilded trap by the high economic value of the Maine lobster fishery. Conservation Biology, 25 (5). pp. 904-912.

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Emslie, M.J., Pratchett, M.S., and Cheal, A.J. (2011) Effects of different disturbance types on butterflyfish communities of Australia's Great Barrier Reef. Coral Reefs, 30 (2). pp. 461-471.

Cole, A.J., and Pratchett, M.S. (2011) Effects of juvenile coral-feeding butterflyfishes on host corals. Coral Reefs, 30 (3). pp. 623-630.

Evans, Louisa, Brown, Katrina, and Allison, Edward H. (2011) Factors influencing adaptive marine governance in a developing country context: a case study of southern Kenya. Ecology and Society, 16 (2). 21. pp. 1-22.

Tan, C.H., and Heron, S.F (2011) First observed severe mass bleaching in Malaysia, Greater Coral Triangle. Galaxea, Journal of Coral Reef Studies, 13 (1). pp. 27-28.

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Visconti, Piero, Pressey, Bob, Giorgini, Daniele, Maiorano, Luigi, Bakkenes, Michel, Boitani, Luigi, Alkemade, Rob, Falcucci, Alessandra, Chiozza, Federica, and Rondinini, Carlo (2011) Future hotspots of terrestrial mammal loss. Philosophical Transactions of the Royal Society B: Biological Sciences, 366 (1578). pp. 2693-2702.

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Lawton, Rebecca, Messmer, Vanessa, Pratchett, Morgan, and Bay, Line (2011) High gene flow across large geographic scales reduces extinction risk for a highly specialised coral feeding butterflyfish. Molecular Ecology, 20. pp. 3584-3598.

Hoey, Andrew, Pratchett, Morgan, and Cvitanovic, Christopher (2011) High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages. PLoS ONE, 6 (10). e25824.

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Hamann, Mark, Grech, Alana, Wolanski, Eric, and Lambrechts, Jonathan (2011) Modelling the fate of marine turtle hatchlings. Ecological Modelling, 222 (8). pp. 1515-1521.

Schneider, Kenneth, Silverman, Jacob, Woolsey, Erika, Eriksson, Hampus, Byrne, Maria, and Caldeira, Ken (2011) Potential influence of sea cucumbers on coral reef CaCO3 budget: a case study at One Tree Reef. Journal of Geophysical Research: biogeosciences, 116. G04032-G04032.

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Figueiredo, Joana, and Pereira, Henrique M. (2011) Regime shifts in a socio-ecological model of farmland abandonment. Landscape Ecology, 26 (5). pp. 737-749.

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Chong-Seng, K.M., Cole, A.J., Pratchett, M.S., and Willis, B.L. (2011) Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease. Coral Reefs, 30 (2). pp. 473-481.

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Mills, David J., Adhuri, Dedi S., Phillips, Michael J., Ravikumar, Bangarusamy, and Padiyar, Arun P. (2011) Shocks, recovery trajectories and resilience among aquaculture-dependent households in post-tsunami Aceh, Indonesia. Local Environment, 16 (5). pp. 425-444.

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Biggs, Duan (2011) Understanding resilience in a vulnerable industry: the case of reef tourism in Australia. Ecology and Society, 16 (1). 30. pp. 1-18.

Boitani, Luigi, Maiorano, Luigi, Baisero, Daniele, Falcucci, Alessandra, Visconti, Piero, and Rondinini, Carlo (2011) What spatial data do we need to develop global mammal conservation strategies? Philosophical Transactions of the Royal Society B: Biological Sciences, 366 (1578). pp. 2623-2632.

Stolarski, Jarosław, Kitahara, Marcelo V., Miller, David J., Cairns, Stephen D., Mazur, Maciej, and Meibom, Anders (2011) The ancient evolutionary origins of Scleractinia revealed by azooxanthellate corals. BMC Evolutionary Biology, 11. 316. pp. 1-10.

McCowan, Dominique M., Pratchett, Morgan, Paley, Allison, Seeley, Michelle, and Baird, Andrew (2011) A comparison of two methods of obtaining densities of zooxanthellae in Acropora millepora. Galaxea, Journal of Coral Reef Studies, 13. pp. 29-34.

Cinner, Joshua E., and David, Gilbert (2011) The human dimensions of coastal and marine ecosystems in the Western Indian Ocean. Coastal Management, 39 (4). pp. 351-357.

Gates, Ruth D., and Ainsworth, Tracy D. (2011) The nature and taxonomic composition of coral symbiomes as drivers of performance limits in scleractinian corals. Journal of Experimental Marine Biology and Ecology, 408 (1-2). pp. 94-101.

Fabinyi, Michael, and Dalabajan, Dante (2011) The policy–practice dichotomy: An analysis from Palawan, Philippines. SPC Live Reef Fish Information Bulletin, 20. pp. 13-18.

de Graaf, Gertjan J., Grainger, Richard J.R., Westlund, Lena, Willmann, Rolf, Mills, David, Kelleher, Kieran, and Koranteng, Kwame (2011) The status of routine fishery data collection in Southeast Asia, central America, the South Pacific, and West Africa, with special reference to small-scale fisheries. ICES Journal of Marine Science, 68 (8). pp. 1743-1750.

Januchowski-Hartley, S.R., Visconti, P., and Pressey, R.L. (2011) A systematic approach for prioritizing multiple management actions for invasive species. Biological Invasions, 13 (5). pp. 1241-1253.

Biggs, Duan, Turpie, J, Fabricius, C, and Spenceley, A (2011) The value of avitourism for conservation and job creation - an analysis from South Africa. Conservation and Society, 9 (1). pp. 80-90.

Hoffman, Michael, Hilton-Taylor, Craig, Angulo, Ariadne, Böhm, Monika, Brooks, Thomas M., Butchart, Stuart H.M., Carpenter, Kent E., Chanson, Janice, Collen, Ben, Cox, Neil A., Darwall, William R.T., Dulvy, Nicholas K., Harrison, Lucy R., Katariya, Vineet, Pollock, Caroline M., Quader, Suhel, Richman, Nadia I., Rodrigues, Ana S.L., Tognelli, Marcelo F., Vié, Jean-Christophe, Aguiar, John M., Allen, David J., Allen, Gerald R., Amori, Giovanni, Ananjeva, Natalia B., Andreone, Franco, Andrew, Paul, Ortiz, Aida Luz Aquino, Baillie, Jonathan E.M., Baldi, Ricardo, Bell, Ben D., Biju, S.D., Bird, Jeremy P., Black-Decima, Patricia, Blanc, J. Julian, Bolaños, Federico, Bolivar-G., Wilmar, Burfield, Ian J., Burton, James A., Capper, David R., Castro, Fernando, Catullo, Gianluca, Cavanagh, Rachel D., Channing, Alan, Chao, Ning Labbish, Chenery, Anna M., Chiozza, Federica, Clausnitzer, Viola, Collar, Nigel J., Collett, Leah C., Collette, Bruce B., Ferandez, Claudia F. Cortez, Craig, Matthew T., Crosby, Michael J., Cumberlidge, Neil, Cuttelod, Annabelle, Derocher, Andrew E., Diesmos, Arvin C., Donaldson, John S., Duckworth, J.W., Dutson, Guy, Dutta, S.K., Emslie, Richard H., Farjon, Aljos, Fowler, Sarah, Freyhof, Jörg, Garshelis, David L., Gerlach, Justin, Gowler, David J., Grant, Tandora D., Hammerson, Geoffrey A., Harris, Richard B., Heaney, Lawrence R., Hedges, S. Blair, Hero, Jean-Marc, Hughes, Baz, Hussain, Syed Ainul, Icochea M., Javier, Inger, Robert F., Ishii, Nobuo, Iskandar, Djoko T., Jenkins, Richard K.B., Kaneko, Yoshio, Kottelat, Maurice, Kovacs, Kit M., Kuzmin, Sergius L., La Marca, Enrique, Lamoreux, John F., Lau, Michael W.N., Lavilla, Esteban O., Leus, Kristin, Lewison, Rebecca L., Lichtenstein, Gabriela, Livingstone, Suzanne R., Lukoschek, Vimoksalehi, Mallon, David P., McGowan, Philip J.K., McIvor, Anna, Moehlman, Patricia D., Molur, Sanjay, Alonso, Antonio Muñoz, Musick, John A., Nowell, Kristin, Nussbaum, Ronald A., Olech, Wanda, Orlov, Nikolay L., Papenfuss, Theodore J., Parra-Olea, Gabriela, Perrin, Wiliam F., Polidoro, Beth A., Pourkazemi, Mohammad, Racey, Paul A., Ragle, James S., Ram, Mala, Rathbun, Galen, Reynolds, Robert P., Rhodin, Anders G.J., Richards, Stephen J., Rodríguez, Lily O., Ron, Santiago R., Rondinini, Carlo, Rylands, Anthony B., Sadovy de Mitcheson, Yvonne, Sanciangco, Jonnell C., Sanders, Kate L., Santos-Barrera, Georgina, Schipper, Jan, Self-Sullivan, Caryn, Shi, Yichuan, Shoemaker, Alan, Short, Frederick T., Sillero-Zubiri, Claudio, Silvano, Débora L., Smith, Kevin G., Smith, Andrew T., Snoeks, Jos, Stattersfield, Alison J., Symes, Andrew J., Taber, Andrew B., Talukdar, Bibhab K., Temple, Helen J., Timmins, Rob, Tobias, Joseph A., Tsytsulina, Katerina, Tweddle, Denis, Ubeda, Carmen, Valenti, Sarah V., van Dijk, Peter Paul, Veiga, Liza M., Veloso, Alberto, Wege, David C., Wilkinson, Mark, Williamson, Elizabeth A., Xie, Feng, Young, Bruce E., Akçakaya, H. Resit, Bennun, Leon, Blackburn, Tim M., Boitani, Luigi, Dublin, Holly T., da Fonseca, Gustavo A.B., Gascon, Claude, Lacher, Thomas E., Mace, Georgina M., Mainka, Susan A., McNeely, Jeffrey A., Mittermeier, Russell A., Reid, Gordon McGregor, Rodriguez, Jon Paul, Rosenberg, Andrew A., Samways, Michael J., Smart, Jane, Stein, Bruce A., and Stuart, Simon N. (2010) The impact of conservation on the status of the world's vertebrates. Science , 330 (6010). pp. 1503-1509.

Pratchett, M.S., Graham, N.A.J., Sheppard, C.R.C., and Mayes, B. (2010) Are infestations of Cymo melanodactylus killing Acropora cytherea in the Chagos archipelago? Coral Reefs, 29 (4). p. 941.

Lawton, R.J., Wing, S.R., and Lewis, A.M. (2010) Evidence for discrete subpopulations of sea perch (Helicolenus ercoides) across four fjords in Fiordland, New Zealand. New Zealand Journal of Marine and Freshwater Research, 44 (4). pp. 309-322.

Visconti, Piero, Pressey, Robert L., Bode, Michael, and Segan, Daniel B. (2010) Habitat vulnerability in conservation planning — when it matters and how much. Conservation Letters, 3 (6). pp. 404-414.

Weeks, Rebecca, Russ, Garry R., Bucol, Abner A., and Alcala, Angel C. (2010) Incorporating local tenure in the systematic design of marine protected area networks. Conservation Letters, 3 (6). pp. 445-453.

Nias, Raymond C., Burbidge, Andrew A., Ball, Derek, and Pressey, Robert L. (2010) Island arks: the need for an Australian national island biosecurity initiative. Ecological Management and Restoration, 11 (3). pp. 166-167.

Berumen, M. L, Walsh, H.J., Raventos, N., Planes, S., Jones, G.P., Starczak, V., and Thorrold, S.R. (2010) Otolith geochemistry does not reflect dispersal history of clownfish larvae. Coral Reefs, 29 (4). pp. 883-891.

Gardiner, N.M., and Jones, G.P. (2010) Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish. Coral Reefs, 29 (4). pp. 845-856.

Fuentes, M.M.P.B, and Cinner, J.E. (2010) Using expert opinion to prioritize impacts of climate change on sea turtles’ nesting grounds. Journal of Environmental Management, 91 (12). pp. 2511-2518.

Smajgl, A, Larson, S., Hug, B., and Martins De Freitas, D.M. (2010) Water use benefit index as a tool for community-based monitoring of water related trends in the Great Barrier Reef region. Journal of Hydrology, 395 (1-2). pp. 1-9.

Magurran, Anne, and Dornelas, Maria (2010) Biological diversity in a changing world: introduction. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1558). pp. 3593-3597.

MacNeil, M. Aaron, Graham, Nicholas A.J., Cinner, Joshua E., Dulvy, Nicholas K., Loring, Philip A., Jennings, Simon, Polunin, Nicholas V., Fisk, Aaron T., and McClanahan, Tim R. (2010) Transitional states in marine fisheries: adapting to predicted global change. Philosophical Transactions of the Royal Society B: Biological Sciences, 365 (1558). pp. 3753-3763.

Lyko, Frank, Foret, Sylvain, Kucharski, Robert, Wolf, Stephan, Falckenhayn, Cassandra, and Maleszka, Ryszard (2010) The honey bee epigenomes: differential methylation of brain DNA in queens and workers. PLoS Biology, 8 (11). e1000506. pp. 1-12.

Kvennefors, E. Charlotte E., Leggat, William, Kerr, Caroline C., Ainsworth, Tracy D., Hoegh-Guldberg, Ove, and Barnes, Andrew C. (2010) Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis. Developmental and Comparative Immunology, 34 (11). pp. 1219-1229.

Wen, C.K-C. , Pratchett, M.S., Shao, K-T., Kan, K-P., and Chan, B.K.K. (2010) Effects of habitat modification on coastal fish assemblages. Journal of Fish Biology, 77 (7). pp. 1674-1687.

Barbosa, M., Dornelas, M., and Magurran, A.E. (2010) Effects of polyandry on male phenotypic diversity. Journal of Evolutionary Biology, 23 (11). pp. 2442-2452.

Feary, D.A., Burt, J.A., Bauman, A.G., Usseglio, P., Sale, P.F., and Cavalcante, G.H. (2010) Fish communities on the world's warmest reefs: what can they tell us about the effects of climate change in the future? Journal of Fish Biology, 77 (8). pp. 1931-1947.

Hughes, Terry P., Graham, Nicholas A.J., Jackson, Jeremy B.C., Mumby, Peter J., and Steneck, Robert S. (2010) Rising to the challenge of sustaining coral reef resilience. Trends in Ecology & Evolution, 25 (11). pp. 633-642.

Fabinyi, Michael, Knudsen, Magne, and Segi, Shio (2010) Social complexity, ethnography and coastal resource management in the Philippines. Coastal Management, 38 (6). pp. 617-632.

Bauman, Andrew G., Burt, John A., Feary, David A., Marquis, Elise, and Usseglio, Paolo (2010) Tropical harmful algal blooms: an emerging threat to coral reef communities? Marine Pollution Bulletin, 60 (11). pp. 2117-2122.

McCook, Laurence, Ayling, Anthony, Cappo, Mike, Choat, J. Howard, Evans, Richard D., De Freitas, Debora M., Heupel, Michelle, Hughes, Terry P., Jones, Geoffrey P., Mapstone, Bruce, Marsh, Helene, Mills, Morena, Molloy, Fergus J., Pitcher, C. Roland, Pressey, Robert L., Russ, Garry R., Sutton, Stephen, Sweatman, Hugh, Tobin, Renae, Wachenfeld, David R., and Williamson, David H. (2010) Adaptive management of the Great Barrier Reef: A globally significant demonstration of the benefits of networks of marine reserves. Proceedings of the National Academy of Sciences of the United States of America, 107 (43). 18278- 18285.

Pollnac, Richard, Christie, Patrick, Cinner, Joshua E., Dalton, Tracey, Daw, Tim M., Forrester, Graham E., Graham, Nicholas A.J., and McClanahan, Timothy R. (2010) Marine reserves as linked social–ecological systems. Proceedings of the National Academy of Sciences, 107 (43). pp. 18262-18265.

Gardiner, Naomi M., Munday, Philip L., and Nilsson, Göran E. (2010) Counter-gradient variation in respiratory performance of coral reef fishes at elevated temperatures. PLoS ONE, 5 (10). e13299. pp. 1-13.

Hobbs, J.-P. A., and McDonald, C.A. (2010) Increased seawater temperature and decreased dissolved oxygen triggers fish kill at the Cocos (Keeling) Islands, Indian Ocean. Journal of Fish Biology, 77 (6). pp. 1219-1229.

Burt, John, Feary, David, Usseglio, Paolo, Bauman, Andrew, and Sale, Peter F. (2010) The influence of wave exposure on coral community development on man-made breakwater reefs, with a comparison to a natural reef. Bulletin of Marine Science, 86 (4). pp. 839-859.

Gelcich, Stefan, Hughes, Terry P., Olsson, Per, Folke, Carl, Defeo, Omar, Fernández, Miriam, Foale, Simon, Gunderson, Lance H., Rodriguez-Sickert, Carlos, Scheffer, Marten, Steneck, Robert S., and Castilla, Juan C. (2010) Navigating transformations in governance of Chilean marine coastal resources. Proceedings of the National Academy of Sciences of the United States of America, 107 (39). pp. 16794-16799.

Pratchett, M.S. (2010) Changes in coral assemblages during an outbreak of Acanthaster planci at Lizard Island, northern Great Barrier Reef (1995-1999). Coral Reefs, 29 (3). pp. 717-725.

Januchowski, S.R., Pressey, R.L., VanDerWal, J., and Edwards, A. (2010) Characterizing errors in digital elevation models and estimating the financial costs of accuracy. International Journal of Geographical Information Science, 24 (9). pp. 1327-1347.

Ban, Natalie C., Alidina, Hussein M., and Ardron, Jeff A. (2010) Cumulative impact mapping: advances, relevance and limitations to marine management and conservation, using Canada’s Pacific waters as a case study. Marine Policy, 34 (5). pp. 876-886.

Campbell, Hamish A., Watts, Matthew E., Sullivan, Scott, Read, Mark A., Choukroun, Severine, Irwin, Steve R., and Franklin, Craig E. (2010) Estuarine crocodiles ride surface currents to facilitate long-distance travel. Journal of Animal Ecology, 79 (5). pp. 955-964.

Emslie, M.J., Pratchett, M.S., Cheal, A.J., and Osborne, K. (2010) Great Barrier Reef butterflyfish community structure: the role of shelf position and benthic community type. Coral Reefs, 29 (3). pp. 705-715.

Lawton, Rebecca J., Pratchett, Morgan S., and Bay, Line K. (2010) Isolation and characterization of 29 microsatellite loci for studies of population connectivity in the butterflyfishes Chaetodon trifascialis and Chaetodon lunulatus. Conservation Genetics Resources, 2 (Supplement 1). 209-213.

Jing, Junmei, Burden, Conrad J., Forêt, Sylvain, and Wilson, Susan R. (2010) Statistical considerations underpinning an alignment-free sequence comparison method. Journal of the Korean Statistical Society, 39 (3). pp. 325-335.

Phillips, Steven J., Archer, Aaron, Pressey, Robert L., Torkornoo, Desmond, Applegate, David, Johnson, David, and Watts, Matthew E. (2010) Voting power and target-based site prioritization. Biological Conservation, 143 (9). pp. 1989-1997.

Mills, Morena, Pressey, Robert L., Weeks, Rebecca, Foale, Simon, and Ban, Natalie C. (2010) A mismatch of scales: challenges in planning for implementation of marine protected areas in the Coral Triangle. Conservation Letters, 3 (5). pp. 291-303.

Brewer, Tom David (2010) Putting census data to work. Science, 329 (5994). pp. 901-902.

Cinner, Joshua E., and Bodin, Örjan (2010) Livelihood diversification in tropical coastal communities: a network-based approach to analyzing 'livelihood landscapes'. PLoS ONE, 5 (8). e11999. pp. 1-13.

Biggs, Duan (2010) Book review: The Tourism Society’s Dictionary for the Tourism Industry, Verite Reily Collins, (Third ed.)CABI, Wallingford (2008) 150 pp, ISBN: 978 1 84593 449 1. Tourism Management, 31 (4). p. 556.

Nilsson, Göran E., Östlund-Nilsson, Sara, and Munday, Philip L. (2010) Effects of elevated temperature on coral reef fishes: loss of hypoxia tolerance and inability to acclimate. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 156 (4). pp. 389-393.

Klein, Carissa J., Ban, Natalie C., Halpern, Benjamin S., Beger, Maria, Game, Edward T., Grantham, Hedley S., Green, Alison, Klein, Travis J., Kininmonth, Stuart, Treml, Eric, Wilson, Kerrie, and Possingham, Hugh P. (2010) Prioritizing land and sea conservation investments to protect coral reefs. PLoS ONE, 5 (8). e12431. pp. 1-8.

Grantham, Hedley S., Pressey, Robert L., Wells, Jessie A., and Beattie, Andrew J. (2010) Effectiveness of biodiversity surrogates for conservation planning: different measures of effectiveness generate a kaleidoscope of variation. PLoS ONE, 5 (7). e11430. pp. 1-12.

Kitahara, Marcelo V., Cairns, Stephen D., Stolarski, Jaroslaw, Blair, David, and Miller, David J. (2010) A comprehensive phylogenetic analysis of the Scleractinia (Cnidaria, Anthozoa) based on mitochondrial CO1 sequence data. PLoS ONE, 5 (7). e11490. pp. 1-9.

Brooker, R.M., Munday, P.L., and Ainsworth, T.D. (2010) Diets of coral-dwelling fishes of the genus Gobiodon with evidence of corallivory. Journal of Fish Biology, 76 (10). pp. 2578-2583.

Fuentes, M.M.P.B, Limpus, C.J., and Hamann, M. (2010) Impacts of climate change on the largest green turtle population in the world: the nGBR green turtle population. Indian Ocean Turtle Newsletter, 12. pp. 6-8.

Graham, Nicholas, Spalding, Mark D., and Sheppard, Charles R.C. (2010) Reef shark declines in remote atolls highlight the need for multi-faceted conservation action. Aquatic Conservation: marine and freshwater ecosystems , 20 (5). pp. 543-548.

Baird, Andrew H., Kospartov, Marie C., and Purcell, Steven (2010) Reproductive synchrony in Acropora assemblages on reefs of New Caledonia. Pacific Science, 64 (3). pp. 405-412.

Penin, Lucie, Michonneau, François, Baird, Andrew H., Connolly, Sean R., Pratchett, Morgan S., Kayal, Mohsen, and Adjeroud, Mehdi (2010) Early post-settlement mortality and the structure of coral assemblages. Marine Ecology Progress Series, 408. pp. 55-64.

Kool, Johnathan T., Paris, Claire B., Andréfouët, Serge , and Cowen, Robert K. (2010) Complex migration and the development of genetic structure in subdivided populations: an example from Caribbean coral reef ecosystems. Ecography, 33 (3). pp. 597-606.

Ball, Eldon E., and Miller, David J. (2010) Putting placozoans on the (phylogeographic) map. Molecular Ecology, 19 (11). pp. 2181-2183.

Fabinyi, Michael (2010) The intensification of fishing and the rise of tourism: competing coastal livelihoods in the Calamianes Islands, Philippines. Human Ecology, 38 (3). pp. 415-427.

Jones, D.B., Jerry, D.R., McCormick, M.I., and Bay, L.K. (2010) The population genetic structure of a common tropical damselfish on the Great Barrier Reef and eastern Papua New Guinea. Coral Reefs, 29 (2). pp. 455-467.

Bongaerts, Pim, Riginos, Cynthia, Ridgway, Tyrone, Sampayo, Eugenia M., van Oppen, Madeline J.H., Englebert, Norbert, Vermeulen, Francisca, and Hoegh-Guldberg, Ove (2010) Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium. PLoS ONE, 5 (5). e10871. pp. 1-11.

McCormick, Mark I., Ryen, Christopher A., Munday, Philip L., and Walker, Stefan P.W. (2010) Differing mechanisms underlie sexual size-dimorphism in two populations of a sex-changing fish. PLoS ONE, 5 (5). e10616. 1- 8.

MacNeil, M. Aaron, and Graham, Nicholas A.J. (2010) Enabling regional management in a changing climate through Bayesian meta-analysis of a large-scale disturbance. Global Ecology and Biogeography , 19 (3). pp. 412-421.

Lefevre, Carine, and Bellwood, David (2010) Seasonality and dynamics in coral reef macroalgae: variation in condition and susceptibility to herbivory. Marine Biology, 157 (5). pp. 955-965.

Hartmann, Beata, Müller, Michael, Hislop, Nikki R., Roth , Bettina, Tomljenovic, Lucija, Miller, David J., and Reichert, Heinrich (2010) Coral emx-Am can substitute for Drosophila empty spiracles function in head, but not brain development. Developmental Biology, 340 (1). pp. 125-133.

Forêt, Sylvain, Knack, Brent, Houliston, Evelyn, Momose, Tsuyoshi, Manuel, Michael, Quéinnec, Eric, Hayward, David C., Ball, Eldon E., and Miller, David J. (2010) New tricks with old genes: the genetic bases of novel cnidarian traits. Trends in Genetics, 26 (4). pp. 154-158.

Evangelista, Carla, Mills, Morena, Siebeck, Ulrike E., and Collin, Shaun P. (2010) A comparison of the external morphology of the membranous inner ear in elasmobranchs. Journal of Morphology, 271 (4). pp. 483-495.

Ainsworth, Tracy D., Thurber, Rebecca Vega, and Gates, Ruth D. (2010) The future of coral reefs: a microbial perspective. Trends in Ecology and Evolution, 25 (4). pp. 233-240.

Cole, A.J. (2010) Cleaning to corallivory: ontogenetic changes in feeding behaviour of tubelip wrasse. Coral Reefs, 29 (1). pp. 125-129.

Visconti, Piero, Pressey, Robert L., Segan, Daniel B., and Wintle, Brendan A. (2010) Conservation planning with dynamic threats: the role of spatial design and priority setting for species' persistence. Biological Conservation, 143 (3). pp. 756-767.

Cole, A.J, Pratchett, M.S., and Jones, G.P. (2010) Corallivory in tubelip wrasses: diet, feeding and trophic importance. Journal of Fish Biology, 76 (4). pp. 818-835.

Wilson, S.K., Fisher, R., Pratchett, M.S., Graham, N.A.J., Dulvy, N.K., Turner , R.A., Cakacaka, A., and Polunin, N.V.C. (2010) Habitat degradation and fishing effects on the size structure of coral reef fish communities. Ecological Applications, 20 (2). pp. 442-451.

Kitahara, Marcelo V., Cairns, Stephen D., and Miller, David J. (2010) Monophyletic origin of Caryophyllia (Scleractinia, Caryophylliidae), with descriptions of six new species. Systematics and Biodiversity, 8 (1). pp. 91-118.

Hanafy, M.H., Aamer, M.A., Habib, M., Rouphael, Anthony B., and Baird, Andrew H. (2010) Synchronous reproduction of corals in the Red Sea. Coral Reefs, 29 (1). pp. 119-124.

Bellwood, D.R., Klanten, S., Cowman, P.F., Pratchett, M.S., Konow, N., and Van Herwerden, L. (2010) Evolutionary history of the butterflyfishes (f: Chaetodontidae) and the rise of coral feeding fishes. Journal of Evolutionary Biology, 23 (2). pp. 335-349.

Edwards, Helen J., Elliott, Ian A., Pressey, Robert L., and Mumby, Peter J. (2010) Incorporating ontogenetic dispersal, ecological processes and conservation zoning into reserve design. Biological Conservation, 143 (2). pp. 457-470.

Adams, Vanessa M., Pressey, Robert L., and Naidoo, Robin (2010) Opportunity costs: who really pays for conservation. Biological Conservation, 143 (2). pp. 439-448.

Game, Edward T., Grantham, Hedley S., Hobday, Alistair J., Pressey, Robert L., Lombard, Amanda T., Beckley, Lynnath E., Gjerde, Kristina, Bustamante, Rodrigo, Possingham, Hugh P., and Richardson, Anthony J. (2010) Pelagic MPAs: The devil you know. Trends in Ecology & Evolution, 25 (2). pp. 63-64.

Feagin, Rusty A., Mukherjee, Nibedita, Shanker, Kartik, Baird, Andrew H., Cinner, Joshua, Kerr, Alexander M., Koedam, Nico, Sridhar, Aarthi, Arthur, Rohan, Jayatissa, L.P., Lo Seen, Danny, Menon, Manju, Rodriguez, Sudarshan, Shamsuddoha, Md., and Dahdouh-Guebas, Farid (2010) Shelter from the storm? Use and misuse of coastal vegetation bioshields for managing natural disasters. Conservation Letters, 3 (1). pp. 1-11.

Carvalho, Silvia B., Brito, José C., Pressey, Robert L., Crespo, Eduardo, and Possingham, Hugh P. (2010) Simulating the effects of using different types of species distribution data in reserve selection. Biological Conservation, 143 (2). pp. 426-438.

Miller, David J., and Technau, Ulrich (2010) Understanding the evolution of multicellularity; insights from basal metazoans. BioEssays, 32 (2). pp. 175-178.

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Jones, G.P., Almany, G.R., Russ, G.R., Sale, P.F., Steneck, R.S., Van Oppen, M.J.H., and Willis, B.L. (2009) Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28 (2). pp. 307-325.

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Cinner, Joshua E. (2009) Book review of "The Middle Path: avoiding environmental catastrophe" by Eric Lambin, translated by M.B. DeBevoise, University of Chicago Press, Chicago, USA. Quarterly Review of Biology, 84 (1). pp. 92-93.

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Broderick, Kathleen (2008) Book review of "Water: Histories, Cultures, Ecologies" by M. Leybourne and A. Gaynor, University of Western Australia Press, Australia. Geographical Research, 46 (1). pp. 132-133.

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Broderick, Kathleen, and Gill, Nicholas (2008) Guest editor's introduction: water crisis? Socio-cultural and environmental dimensions of water and rivers. Geographical Research, 46 (3). pp. 255-257.

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Yellowlees, David, and Leggat, William (2008) Heat shock. Australasian Science, 29 (4). pp. 34-35.

Baird, Andrew H., and Kerr, Alexander M. (2008) Landscape analysis and tsunami damage in Aceh: comment on Iverson and Prasad (2007). Landscape Ecology, 23 (1). pp. 3-5.

Kitahara, Marcelo V., and Cairns, Stephen D. (2008) New records of the genus Crispatotrochus (Scleractinia; Caryophylliidae) from New Caledonia, with description of a new species. Zootaxa, 1940. pp. 59-68.

Maynard, J.A., Baird, A.H., and Pratchett, M.S. (2008) Revisiting the Cassandra syndrome; the changing climate of coral reef research. Coral Reefs, 27. pp. 745-749.

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Iguchi, Akira, Márquez, Luis M., Knack, Brent, Shinzato, Chuya, van Oppen, Madeleine J.H., Willis, Bette L., Hardie, Kate, Catmull, Julian, and Miller, David J. (2007) Apparent involvement of a β1 type integrin in coral fertilization. Marine Biotechnology, 9 (6). pp. 760-765.

Mikusiński, G., Pressey, R.L., Edenius, L., Kujala, H., Moilanen, A., Niemelä, J., and Ranius, T. (2007) Conservation planning in forest landscapes of Fennoscandia and an approach to the challenge of Countdown 2010. Conservation Biology, 21 (6). pp. 1445-1454.

Turner, R.A., Cakacaka, A., Graham, N.A.J., Polunin, N.V.C., Pratchett, M.S., Stead, S.M., and Wilson, S.K. (2007) Declining reliance on marine resources in remote South Pacific societies: ecological versus socio-economic drivers. Coral Reefs, 26 (4). pp. 997-1008.

Cinner, J.E. (2007) Designing marine reserves to reflect local socioeconomic conditions: lessons from long-enduring customary management systems. Coral Reefs, 26 (4). pp. 1035-1045.

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Cinner, Joshua E., Sutton, Stephen G., and Bond, Trevor G. (2007) Socioeconomic thresholds that affect use of customary fisheries management tools. Conservation Biology, 21 (6). pp. 1603-1611.

Cinner, Joshua E. (2007) The role of taboos in conserving coastal resources in Madagascar. Traditional Marine Resource Management and Knowledge Information Bulletin, 22. pp. 15-23.

Hughes, Terence P., Gunderson, Lance H., Folke, Carl, Baird, Andrew H., Bellwood, David, Berkes, Fikret, Crona, Beatrice, Helfgott, Ariella, Leslie, Heather, Norberg, Jon, Nyström, Marcus, Olsson, Per, Österblom, Henrik, Scheffer, Marten, Schuttenberg, Heidi, Steneck, Robert S., Tengo, Maria, Troell, Max, Walker, Brian, Wilson, James, and Worm, Boris (2007) Adaptive management of the Great Barrier Reef and the Grand Canyon World Heritage Areas. Ambio, 36 (7). pp. 586-592.

Pressey, Robert L., Cabeza, Mar, Watts, Matthew E., Cowling, Richard M., and Wilson, Kerrie A. (2007) Conservation planning in a changing world. Trends in Ecology & Evolution, 22 (11). pp. 583-592.

Broderick, Kathleen (2007) Getting a handle on social-ecological systems in catchments: the nature and importance of environmental perception. Australian Geographer, 38 (3). pp. 297-308.

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Baird, Andrew H., Cumbo, Vivian R., Leggat, Bill, and Rodriguez-Lanetty, Mauricio (2007) Fidelity and flexibility in coral symbioses. Marine Ecology Progress Series, 347. pp. 307-309.

Leggat, William, Ainsworth, Tracy, Bythell, John, Dove, Sophie, Gates, Ruth, Hoegh-Guldberg, Ove, Iglesias-Prieto, Roberto, and Yellowlees, David (2007) The hologenome theory disregards the coral holobiont. Nature Reviews Microbiology, 5. - .

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Adjeroud, Mehdi, Pratchett, Morgan, Kospartov, Marie, Lejeusne, Christophe, and Penin, Lucie (2007) Small-scale variability in the size structure of scleractinian corals around Moorea, French Polynesia: patterns across depths and locations. Hydrobiologia, 589 (1). pp. 117-126.

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Baird, Andrew H., and Kerr, Alexander M. (2007) The dangerous myth of tsunami greenbelts: Response to Stone 2006. Science. p. 1.

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Penin, Lucie, Adjeroud, Mehdi, Pratchett, Morgan S., and Hughes, Terence P. (2007) Spatial distribution of juvenile and adult corals around Moorea (French Polynesia): implications for population regulation. Bulletin of Marine Science, 80 (2). pp. 379-390.

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Markey, Kathryn L., Baird, Andrew H., Humphrey, Craig, and Negri, Andrew P. (2007) Insecticides and a fungicide affect multiple coral life stages. Marine Ecology Progress Series, 330. pp. 127-137.

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Carwardine, J., Rochester, W.A., Richardson, K.S., Williams, K.J., Pressey, R.L., and Possingham, H.P. (2007) Conservation planning with irreplaceability: does the method matter? Biodiversity and Conservation, 16 (1). pp. 245-258.

Pratchett, Morgan S. (2007) Feeding preferences of Acanthaster planci (Echinodermata: Asteroidea) under controlled conditions of food availability. Pacific Science, 61 (1). pp. 113-120.

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Pratchett, Morgan S. (2007) Dietary selection by coral-feeding butterflyfishes (Chaetodontidae) on the Great Barrier Reef, Australia. Raffles Bulletin of Zoology: Supplement Series, 14. pp. 171-176.

Fabinyi, Michael (2007) Illegal fishing and masculinity in the Philippines: a look at the Calamianes Islands in Palawan. Philippine Studies, 55 (4). pp. 509-529.

MacIntyre, Martha, and Foale, Simon (2007) Land and marine tenure, ownership and new forms of entitlement on Lihir: changing notions of property in the context of a goldmining project. Human Organization, 66 (1). pp. 49-59.

Kerr, Alexander, and Baird, Andrew (2007) Natural Barriers to Natural Disasters. BioScience, 57 (2). pp. 102-103.

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Sabetian, Armagan, and Foale, Simon (2006) Evolution of the artisanal fisher: case studies from Solomon Islands and Papua New Guinea. Traditional Marine Resource Management and Knowledge Information Bulletin, 20. pp. 3-10.

Berumen, Michael L., and Pratchett, Morgan S. (2006) Recovery without resilience: persistent disturbance and long-term shifts in the structure of fish and coral communities at Tiahura Reef, Moorea. Coral Reefs, 25 (4). pp. 647-653.

Pratchett, M.S., Wilson, S.K., and Baird, A.H. (2006) Declines in the abundance of Chaetodon butterflyfishes following extensive coral depletion. Journal of Fish Biology, 69 (5). pp. 1269-1280.

Wilson, Shaun K., Graham, Nicholas A.J., Pratchett, Morgan S., Jones, Geoffrey P., and Polunin, Nicholas V.C. (2006) Multiple disturbances and the global degradation of coral reefs: are reef fishes at risk or resilient? Global Change Biology, 12 (11). pp. 2220-2234.

Hughes, T.P., Berkes, F, Steneck, R.S., Wilson, J.A.., Bellwood, D.R., Crona, B, Folke, C., Gunderson, LH, Leslie, HM, Norberg, J., Nystrom, M., Olsson, P., Osterblom, H., Scheffer, M., and Worm, B. (2006) Keeping bandits at bay? Response. Science, 313 (5787). pp. 612-614.

Baird, Andrew (2006) Myth of green belts. Samudra Report, 44. pp. 14-19.

McClanahan, Timothy R., Marnane, Michael J., Cinner, Joshua E., and Kiene, William E. (2006) A comparison of marine protected areas and alternative approaches to coral-reef management. Current Biology, 16 (14). pp. 1408-1413.

Graham, Nicholas A.J., Wilson, Shaun K., Jennings, Simon, Polunin, Nicholas V.C., Bijoux, Jude P., and Robinson, Jan (2006) Dynamic fragility of oceanic coral reef ecosystems. National Academy of Sciences. Proceedings, 103 (22). pp. 8425-8429.

Kerr, Alexander M., Baird, Andrew H., and Campbell, Stuart J. (2006) Comments on "Coastal mangrove forests mitigated tsunami" by K. Kathiresan and N. Rajendran [Estuar. Coast. Shelf Sci. 65 (2005) 601-606]. Estuarine, Coastal and Shelf Science , 67 (3). pp. 539-541.

Page, Cathie, and Willis, Bette (2006) Distribution, host range and large-scale spatial variability in black band disease prevalence on the Great Barrier Reef, Australia. Diseases of Aquatic Organisms, 69 (1). pp. 41-51.

Berkes, F., Hughes, T.P., Steneck, R.S., Wilson, J.A., Bellwood, D.R., Crona, B., Folke, C., Gunderson, L.H., Leslie, H.M., Norberg, J., Nyström, M., Olsson, P., Österblom, H., Scheffer, M., and Worm, B. (2006) Globalization, roving bandits, and marine resources. Science, 311 (5767). pp. 1557-1558.

Ceccarelli, Daniela M., Hughes, Terry P., and McCook, Laurence J. (2006) Impacts of simulated overfishing on the territoriality of coral reef damselfish. Marine Ecology Progress Series, 309. pp. 255-256.

Dornelas, Maria, Connolly, Sean R., and Hughes, Terrence P. (2006) Coral reef diversity refutes the neutral theory of biodiversity. Nature, 440 (7080). pp. 80-82.

Baird, A.H., Salih, A., and Trevor-Jones, A. (2006) Fluorescence census techniques for the early detection of coral recruits. Coral Reefs, 25 (1). pp. 73-76.

Cinner, J.E., and McClanahan, T.R. (2006) Socioeconomic factors that lead to overfishing in small-scale coral reef fisheries of Papua New Guinea. Environmental Conservation, 33 (1). pp. 73-80.

Plathong, S., Chanmethakul, T., Suwonno, V., Buaphet, P., Baird, A.H., Chen, C.A., and Soontornpitakkool, S. (2006) Daytime gamete release from the reef-building coral, Pavona sp., in the Gulf of Thailand. Coral Reefs, 25 (1). p. 72.

Lebel, Louis, Anderies, John M., Campbell, Bruce, Folke, Carl, Hatfield-Dodds, Steve, Hughes, Terry P., and Wilson, James (2006) Governance and the capacity to manage resilience in regional social-ecological systems. Ecology and Society, 11 (1). 19. pp. 1-21.

Ferguson, Kathryn (2006) Parliament of whores: the mystery of the mace. Victorian Review, 32 (2). pp. 64-87.

Cinner, Joshua E., Marnane, Michael J., and McClanahan, Timothy R. (2005) Conservation and community benefits from traditional coral reef management at Ahus Island, Papua New Guinea. Conservation Biology, 19 (6). pp. 1714-1723.

Pratchett, Morgan S. (2005) Dietary overlap among coral-feeding butterflyfishes (Chaetodontidae) at Lizard Island, northern Great Barrier Reef. Marine Biology, 148. pp. 373-382.

Frisch, Ashley (2005) Bachelors seek house and harem: the cryptic word of crayfish on coral reefs. Australasian Science, 26 (10). pp. 41-42.

Miller, David J., Ball, Eldon E., and Technau, Ulrich (2005) Cnidarians and ancestral genetic complexity in the animal kingdom. Trends in Genetics, 21 (10). pp. 536-539.

Cinner, Joshua E., Marnane, Michael J., McClanahan, Timothy R., Clark, Tracy H., and Ben, John (2005) Trade, tenure, and tradition: influence of sociocultural factors on resource use in Melanesia. Conservation Biology, 19 (5). pp. 1469-1477.

Adger, W. Neil, Hughes, Terry P., Folke, Carl, Carpenter, Stephen R., and Rockström, Johan (2005) Social-ecological resilience to coastal disasters. Science, 309 (5737). pp. 1036-1039.

Hughes, Terence P., Bellwood, David R., Folke, Carl, Steneck, Robert S., and Wilson, James (2005) New paradigms for supporting the resilience of marine ecosystems. Trends in Ecology and Evolution, 20 (7). pp. 380-386.

Jackson, Jeremy B.C., Ogden, John C., Pandolfi, John M., Baron, Nancy, Bradbury, Rodger H., Guzman, Hector M., Hughes, Terry, Kappel, Carrie V., Micheli, Fiorenza, Possingham, Hugh P., and Sala, Enric (2005) Reassessing U.S. coral reefs. Science, 308 (5729). pp. 1740-1742.

Bellwood, D.R., Hughes, T.P., Connolly, S.R., and Tanner, J. (2005) Environmental and geometric constraints on Indo-Pacific coral reef biodiversity. Ecology Letters, 8 (6). pp. 643-651.

Cinner, Josh, Marnane, Michael J., McClanahan, Timothy R., and Almany, Glenn R. (2005) Periodic closures as adaptive coral reef management in the Indo-Pacific. Ecology and Society, 11 (1). 31. - .

Wilson, Kerrie, Pressey, Robert L., Newton, Adrian, Burgman, Mark, Possingham, Hugh, and Weston, Chris (2005) Measuring and incorporating vulnerability into conservation planning. Environmental Management, 35 (5). pp. 527-543.

Svancara, Leona K., Brannon, Ree, Scott, J. Michael, Groves, Craig R., Noss, Reed F., and Pressey, Bob (2005) Policy-driven versus evidence-based conservation: A review of political targets and biological needs. BioScience, 55 (11). pp. 989-995.

Guest, J.R., Baird, A.H., Goh, B.P.L., and Chou, L.M. (2005) Seasonal reproduction in equatorial reef corals. Invertebrate Reproduction and Development, 48. - .

Ferguson, Kathryn H. (2005) You don’t know Jack. Journal of Australian Studies, 28 (84). pp. 53-62.

Fidelman, Pedro (2005) A contribution to the mitigation of impacts from the Aquatic Macrophyte Eichhornia crassipes on the Coastal Zone of Southern Bahia, Brazil. Journal of Integrated Coastal Zone Management, 4 (3). pp. 1-5.

Caldwell, Iain, Vernes, Karl, and Baerlocher, F. (2005) The northern flying squirrel (Glaucomys sabrinus) as a vector for inoculation of red spruce (Picea rubens) seedlings with ectomycorrhizal fungi. Sydowia, 57 (2). pp. 166-178.

Pressey, R.L. (2004) Conservation planning and biodiversity: assembling the best data for the job. Conservation Biology, 18 (6). pp. 1677-1681.

Pratchett, M.S., Wilson, S.K., Berumen, M.L., and McCormick, M.I. (2004) Sublethal effects of coral bleaching on an obligate coral feeding butterflyfish. Coral Reefs, 23 (3). pp. 352-356.

Diaz-Pulido, Guillermo, and McCook, Laurence J (2004) Effects of live coral, epilithic algal communities and substrate type on algal recruitment. Coral Reefs, 23 (2). pp. 225-233.

Wolanski, Eric, Richmond, Robert H., and McCook, Laurence (2004) A model of the effects of land-based, human activities on the health of coral reefs in the Great Barrier Reef and in Fouha Bay, Guam, Micronesia. Journal of Marine Systems, 46 (1-4). pp. 133-144.

Oliver, Ian, Holmes, Andrew, Dangerfield, J. Mark, Gillings, Michael, Pik, Anthony J., Britton, David R., Holley, Marita, Montgomery, Margaret E., Raison, Madeline, Logan, Vicki, Pressey, Robert L., and Beattie, Andrew J. (2004) Land systems as surrogates for biodiversity in conservation planning. Ecological Applications, 14 (2). pp. 485-503.

Elmhirst, Toby (2003) Spatio-temporal symmetries in SN- and SN×2-equivariant systems. Dynamical Systems, 18 (4). pp. 279-293.

Pandolfi, John M., Bradbury, Roger H., Sala, Enric, Hughes, Terrence P., Bjorndal, Karen A., Cooke, Richard G., McArdle, Deborah, McClenachan, Loren, Newman, Marah J.H., Paredes, Gustavo, Warner, Robert R., and Jackson, Jeremy B.C. (2003) Response to Causes of coral reef degradation [Aronson et al. (2003) Causes of coral reef degradation]. Science, 302 (5650). pp. 1502-1503.

Hughes, Terry (2003) Biogeographic comparisons of coral faunas. Oceanus, 29 (3-4). pp. 291-301.

Wolanski, Eric, Richmond, Robert, McCook, Laurence, and Sweatman, Hugh (2003) Mud, marine snow and coral reefs. American Scientist, 91 (1). pp. 44-51.

Pressey, R.L. (2002) Classics in physical geography revisited. Progress in Physical Geography, 26 (3). pp. 434-441.

Baird, Andrew H,, Bellwood, David R., Connell, Joseph H., Cornell, Howard V., Hughes, Terry P., Karlson, Ronald H., and Rosen, Brian R. (2002) Coral reef biodiversity and conservation. Science, 296 (5570). pp. 1026-1028.

Diaz-Pulido, Guillrtmo, and McCook, Laurence J. (2002) The fate of bleached corals: patterns and dynamics of algal recruitment. Marine Ecology Progress Series, 232. pp. 115-128.

Diaz-Pulido, G., and Garzón-Ferreira, J. (2002) Seasonality in algal assemblages on upwelling-influenced coral reefs in the Colombian Caribbean. Botanica Marina, 45 (3). pp. 284-292.

Hughes, Terry P., Bellwood, David R., and Connolly, Sean R. (2002) Biodiversity hotspots, centres of endemicity, and the conservation of coral reefs. Ecology Letters, 5 (6). pp. 775-784.

Munday, P.L. (2002) Does habitat availability determine geographical-scale abundances of coral-dwelling fishes? Coral Reefs, 21 (1). pp. 105-116.

Dennis, Andrew (2002) The diet of the musky rat-kangaroo Hypsiprymnodon moschatus, a rainforest specialist. Wildlife Research, 29 (2). pp. 209-219.

Lukoschek, Vimoksalehi, and McCormick, Mark I. (2001) Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection. Marine Biology, 138 (6). pp. 1099-1113.

Baird, Andrew H., Pratchett, Morgan S., Gibson, Deborah J., Koziumi, Noriko, and Marquis, Christopher P. (2001) Variable palatability of coral eggs to a planktivorous fish. Marine and Freshwater Research, 52 (6). pp. 865-868.

Pratchett, M., Vytopil, E., and Parks, P. (2000) Coral crabs influence the feeding patterns of crown-of-thorns starfish. Coral Reefs, 19 (1). p. 36.

Diaz, Juan M., Diaz-Pulido, Guillermo, and Sanchez, Juan (2000) Distribution and structure of the southernmost Caribbean coral reefs: golfo de Urabá, Colombia. Scientia Marina, 64 (3). pp. 327-336.

Hughes, Terry P. (2000) Geology and ecology of coral reefs: book review of "Reef Evolution" by Rachel Wood, 1999, Oxford University Press. Trends in Ecology & Evolution, 15 (3). p. 125.

Hughes, T.P., Baird, A.H., Dinsdale, E.A., Moltschaniwskyj, Natalie, Pratchett, M.S., Tanner, J.E., and Willis, B.L. (1999) Patterns of recruitment and abundance of corals along the Great Barrier Reef. Nature, 397. pp. 59-63.

Hughes, Terry, Szmant, Alina M., Steneck, Robert, Carpenter, Robert, and Miller, Steven (1999) Algal blooms on coral reefs: what are the causes? Limnology and Oceanography, 44 (6). pp. 1583-1586.

Hughes, T.P., and Connell, J.H. (1999) Multiple stressors on coral reefs: a long-term perspective. Limnology and Oceanography, 44 (3). pp. 932-940.

Hughes, T.P. (1999) Off-reef transport of coral fragments at Lizard Island, Australia. Marine Geology, 157 (1-2). pp. 1-6.

Berkelmans, R., and Willis, B.L. (1999) Seasonal and local spatial patterns in the upper thermal limits of corals on the inshore Central Great Barrier Reef. Coral Reefs, 18 (3). pp. 219-228.

Smith, L.D., and Hughes, T.P. (1999) An experimental assessment of survival, re-attachment and fecundity of coral fragments. Journal of Experimental Marine Biology and Ecology, 235 (1). pp. 147-164.

Pratchett, Morgan (1999) An infectious disease in crown-of-thorns starfish on the Great Barrier Reef. Coral Reefs, 18. p. 272.

Steele, Mark A., Forrester, Graham E., and Almany, Glenn R. (1998) Influences of predators and conspecifics on recruitment of a tropical and a temperate reef fish. Marine Ecology Progress Series, 172. pp. 115-125.

Connell, Joseph H., Hughes, Terence P., and Wallace, Carden C. (1997) A 30-year study of coral abundance, recruitment, and disturbance at several scales in space and time. Ecological Monographs, 67 (4). pp. 461-488.

Ayre, David J., Hughes, Terence P., and Standish, Rachel J. (1997) Genetic differentiation, reproductive mode, and gene flow in the brooding coral pocillopora damicornis along the Great Barrier Reef, Australia. Marine Ecology Progress Series, 159. pp. 175-187.

Hughes, Terence P. (1996) Demographic approaches to community dynamics: a coral reef example. Ecology, 77 (7). pp. 2256-2260.

Karlson, Ronald H., Hughes, Terence P., and Karlson, Susan R. (1996) Density-dependent dynamics of soft coral aggregations: the significance of clonal growth and form. Ecology, 77 (5). pp. 1592-1599.

Caley, M.J., Carr, M.H., Hixon, M.A., Hughes, T.P., Jones, G.P., and Menge, B.A. (1996) Recruitment and the local dynamics of open marine populations. Annual Review of Ecology and Systematics, 27. pp. 477-500.

Hall, V.R., and Hughes, T.P. (1996) Reproductive strategies of modular organisms: comparative studies of reef-building corals. Ecology, 77 (3). pp. 950-963.

Tanner, Jason E., Hughes, Terence P., and Connell, Joseph H. (1996) The role of history in community dynamics: a modelling approach. Ecology, 77 (1). pp. 108-117.

Tanner, Jason E., Hughes, Terence P., and Connell, Joseph H. (1994) Species coexistence, keystone species, and succession: a sensitivity analysis. Ecology, 75 (8). pp. 2204-2219.

Hughes, Terry (1993) Preface. Coral Reefs, 12 (3-4). p. 115.

Hughes, Terence P., Ayre, David, and Connell, Joseph H. (1992) The evolutionary ecology of corals. Trends in Ecology and Evolution, 7 (9). pp. 292-295.

Book Chapter

Schunter, Celia, Donelson, Jennifer M., Munday, Philip L., and Ravasi, Timothy (2023) Resilience and Adaptation to Local and Global Environmental Change. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes: Model Organisms for Marine Science. CRC Press, Boca Raton, Florida, USA, pp. 253-273.

Rummer, Jodie L., and Illing, Björn (2022) Chapter 7 - Coral reef fishes in a multi-stressor world. In: Strailey, Katherine K., and Suski, Cory D., (eds.) Fish Physiology. Elsevier, Cambridge, United States, pp. 325-391.

Cumming, Graeme S., and Seppelt, Ralf (2022) Spatial mapping and analysis. In: Biggs, Reinette, de Vos, Alta, Preiser, Rika, Clements, Hayley, Maciejewski, Kristine, and Schlüter, Maja, (eds.) The Routledge Handbook of Research Methods for Social-Ecological Systems. Routledge, Abingdon, UK, pp. 332-346.

Ball, Eldon E., Hayward, David C., Bridge, Tom C.L., and Miller, David J. (2021) Acropora - The most-studied coral genus. In: Boutet, Agnès, and Schierwater, Bernd, (eds.) Handbook of Marine Model Organisms in Experimental Biology: Established and Emerging. CRC Press, Boca Raton, FL, USA, pp. 173-193.

Gurney, Georgina, Marshall, Nadine, Curnock, Matt, Pert, Petina, and Thiault, Lauric (2021) Coral reef collapse and sense of place in the Great Barrier Reef, Australia. In: Raymond, Christopher M., Manzo, Lynne, Williams, Danielle, Di Masso, Andrés, and von Wirth, Timo, (eds.) Changing Senses of Place: navigating global challenges. Cambridge University Press, Cambridge, UK, pp. 21-31.

Johnson, Johanna E., Allain, Valerie, Basel, Britt, Bell, Johann D., Chin, Andrew, Dutra, Leo X. C., Hooper, Eryn, Loubser, David, Lough, Janice, Moore, Bradley R., and Nicol, Simon (2020) Impacts of climate change on marine resources in the Pacific Island region. In: Kumar, Lalit, (ed.) Climate Change and Impacts in the Pacific. Springer Climate . Springer, Cham, Switzerland, pp. 359-402.

Matthews, S. A., Mellin, C., and Pratchett, Morgan S. (2020) Larval connectivity and water quality explain spatial distribution of crown-of-thorns starfish outbreaks across the Great Barrier Reef. In: Riegl, Bernhard M., (ed.) Population Dynamics of the Reef Crisis. Advances in Marine Biology, 87 (1). Elsevier, Amsterdam, NDL, pp. 223-258.

Munday, Philip L., Rummer, Jodie L., and Baumann, Hannes (2019) Adaptation and evolutionary responses to high CO₂. In: Grosell, Martin, Munday, Philip L., Farrell, Anthony P., and Bauner, Colin J., (eds.) Carbon Dioxide. Fish Physiology, 37 . Academic Press, Cambridge, MA, USA, pp. 369-395.

Pratchett, Morgan, Bridge, Thomas, Brodie, Jon, Cameron, Darren, Day, Jonathan, Emslie, Mike, Grech, Alana, Hamann, Mark, Heron, Scott, Hoey, Andrew, Hoogenboom, Mia, Lough, Janice, Morrison, Tiffany, Osborne, Kate, Read, Mark, Schauble, Chloe, Smithers, Scott, Sweatman, Hugh, and Waterhouse, Jane (2019) Australia's Great Barrier Reef. In: Sheppard, Charles, (ed.) World Seas: an environmental evaluation. Elsevier, London, UK, pp. 333-362.

Kingsford, M. J., Syms, C., Srinivasan, M., and Jones, G. P. (2019) Coral reef habitats and their influence on reef assemblages. In: Hutchings, Pat, Kingsford, Michael, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: Biology, Environment and Management. CSIRO Publishing, Clayton South, VIC, Australia, pp. 51-62.

Munday, Philip L., Jarrold, Michael D., and Nagelkerken, Ivan (2019) Ecological effects of elevated CO₂ on marine and freshwater fishes: from individual to community effects. In: Grosell, Martin, Munday, Philip L., Farrell, Anthony P., and Brauner, Colin J., (eds.) Carbon Dioxide. Fish Physiology, 37 . Academic Press, Cambridge, MA, USA, pp. 323-368.

Bridge, Tom C.L., Beaman, Robin J., Bongaerts, Pim, Muir, Paul R., Ekins, Merrick, and Sih, Tiffany (2019) The Great Barrier Reef and Coral Sea. In: Loya, Yossi, Puglise, Kimberly A., and Bridge, Tom C.L., (eds.) Mesophotic Coral Ecosystems. Coral Reefs of the World, 12 . Springer, Cham, Switzerland, pp. 351-367.

Brodie, Jon, Grech, Alana, Pressey, Bob, Day, John, Dale, Allan, Morrison, Tiffany, and Wenger, Amelia (2019) The future of the Great Barrier Reef: the water quality imperative. In: Wolanski, Eric, Day, John, Elliott, Mike, and Wenger, Amelia S., (eds.) Coasts and estuaries: The future. Elsevier, Kidlington, Oxon, UK, pp. 477-499.

Booth, David J., Poloczanska, Elvira, Donelson, Jennifer M., García Molinos, Jorge, and Burrows, Michael (2018) Biodiversity and climate change in the oceans. In: Phillips, Bruce F., and Perez-Ramirez, Monica, (eds.) Climate Change Impacts on Fisheries and Aquaculture: a global analysis. Wiley-Blackwell, Hoboken, NJ, USA, pp. 63-89.

Emslie, Michael J., and Pratchett, Morgan S. (2018) Differential vulnerabilities of parrotfishes to habitat degradation. In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 355-382.

Pratchett, M.S., Thompson, C.A., Hoey, A.S., Cowman, P.F., and Wilson, S.K. (2018) Effects of coral bleaching and coral loss on the structure and function of reef fish assemblages. In: van Oppen, Madeleine J.H., and Lough, Janice M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 233 . Springer, Cham, Switzerland, pp. 265-293.

Hoey, Andrew S. (2018) Feeding in Parrotfishes: the influence of species, body size, and temperature. In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 119-133.

Burkepile, Deron E., Rasher B., Douglas, Adam, Thomas C., Hoey, Andrew S., and Hay, Mark E. (2018) Functional variation among parrotfishes: are they complementary or redundant? In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 134-160.

Song, Andrew M. (2018) How to capture small-scale fisheries’ many contributions to society? – Introducing the ‘Value-Contribution Matrix’ and applying it to the case of a swimming crab fishery in South Korea. In: Johnson, Derek, Acott, Tim, Stacey, Natasha, and Urquhart, Julie, (eds.) Social Wellbeing and the Values of Small-scale Fisheries. MARE Publication Series, 17 . Springer, Cham, Switzerland, pp. 124-146.

Hoey, Andrew S., Taylor, Brett M., Hoey, Jessica, and Fox, Rebecca J. (2018) Parrotfishes, are we still scraping the surface? Emerging topics and future research directions. In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 407-416.

Hoey, Andrew S., Berumen, Michael L., Bonaldo, Roberta M., Burt, John A., Feary, David A., Ferreira, Carlos E.L., Floeter, Sergio R., and Nakamura, Yohei (2018) The ecology of parrotfishes in marginal reef systems. In: Hoey, Andrew S., and Bonaldo, Roberta M., (eds.) Biology of Parrotfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 276-301.

Morrison, T.H., Hettiarachchi, Missaka, Seabrook, Leonie, and Mcalpine, Clive (2017) Environmental change and social learning. In: Richardson, Douglas, Castree, Noel, Goodchild, Michael F., Kobayashi, Audrey, Liu, Weidong, and Marston, Richard A., (eds.) International Encyclopedia of Geography: People, the Earth, Environment and Technology. Wiley.

Blythe, Jessica, Cohen, Philippa, Abernethy, Kirsten, and Evans, Louisa (2017) Navigating the transformation to community-based resource management. In: Armitage, Derek, Charles, Anthony, and Berkes, Fikret, (eds.) Governing the Coastal Commons: communities, resilience and transformation. Routledge, Abingdon, UK, pp. 141-156.

Cohen, Philippa J., Song, Andrew M., and Morrison, Tiffany H. (2017) Policy coherence with the small-scale fisheries guidelines: analysing across scales of governance in Pacific small-scale fisheries. In: Jentoft, Svein, Chuenpagdee, Ratana, Barragán-Paladines, María José, and Franz, Nicole, (eds.) The Small-Scale Fisheries Guidelines: Global Implementation. MARE Publication Series (14). Springer, Cham, Switzerland, pp. 57-77.

McCook, Laurence, Lian, Jiansheng, Lei, Xinming, Chen, Zhu, Xue, Guifang (Julia), Cao, Ling, Chen, Shang, Ang, Put, and Huang, Hui (2017) Towards Best Practice Management of Coral Reefs and Marine Protected Areas in the South China Sea: Challenges and Opportunities. In: Xue, Guifang (Julia), and Zheng, Jie, (eds.) The Law of the Sea and Emerging Issues / 海洋法前沿-新议题与新挑战-英文. China Democracy and Legal System Publishing House, Beijing, China, pp. 83-110.

Pratchett, Morgan S., Hoey, Andrew S., Wilson, Shaun K., Hobbs, Jean-Paul A., and Allen, Gerald R. (2016) Habitat-use and specialisation among coral reef damselfishes. In: Frédérich, Bruno, and Parmentier, Eric, (eds.) Biology of Damselfishes. Taylor & Francis, Boca Raton, FL, USA, pp. 84-121.

Bourne, David G., Ainsworth, Tracy D., and Willis, Bette L. (2016) White syndromes of Indo-Pacific corals. In: Woodley, Cheryl M., Downs, Craig A., Bruckner, Andrew W., Porter, James W., and Galloway, Sylvia B., (eds.) Diseases of Coral. John Wiley & Sons, Hoboken, NJ, USA, pp. 300-331.

Graham, Nicholas A.J., and Hicks, Christina C. (2015) Adaptive management for novel ecosystems. In: Allen, Craig R., and Garmestani, Ahjond S., (eds.) Adaptive Management of Social-Ecological Systems. Springer, Dordrecht, Netherlands, pp. 123-146.

Grech, Alana, Edgar, Graham J., Fairweather, Peter, Pressey, Robert L., and Ward, Trevor J. (2015) Australian marine protected areas. In: Stow, Adam, Maclean, Norman, and Holwell, Gregory I., (eds.) Austral Ark: the state of wildlife in Australia and New Zealand. Cambridge University Press, Cambridge, UK, pp. 582-599.

Rummer, Jodie L., and Isom, Lori L. (2015) Communicating science. In: Pritchard, Peggy A., and Grant, Christine S., (eds.) Success Strategies From Women in STEM: a portable mentor. Elsevier, London, UK, pp. 201-254.

Bazaka, Olha, and Bazaka, Kateryna (2015) Cytotoxic effects and biocompatibility of antimicrobial materials. In: Ivanova, Elena P., and Crawford, Russell J., (eds.) Antibacterial Surfaces. Springer, Cham, Switzerland, pp. 113-147.

Pratchett, Morgan S., Wilson, Shaun K., and Munday, Philip L. (2015) Effects of climate change on coral reef fishes. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 127-134.

Cinner, Joshua E., and Kittinger, John N. (2015) Linkages between social systems and coral reefs. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 215-220.

Rummer, Jodie L. (2015) Networking. In: Pritchard, Peggy A., and Grant, Christine S., (eds.) Success Strategies From Women in STEM: a portable mentor. Elsevier, London, UK, pp. 23-62.

Kulbicki, Michel, Parravicini, Valeriano, and Mouillot, David (2015) Patterns and processes in reef fish body size. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 104-115.

Darling, Emily S., and Rummer, Jodie L. (2015) Strategically using social media. In: Pritchard, Peggy A., and Grant, Christine S., (eds.) Success Strategies From Women in STEM: a portable mentor. Elsevier, London, UK, pp. 255-298.

Craigie, Ian D., Grech, Alana, Pressey, Robert L., Adams, Vanessa M., Hockings, Marc, Taylor, Martin, and Barnes, Megan (2015) Terrestrial protected areas of Australia. In: Stow, Adam, Maclean, Norman, and Holwell, Gregory I., (eds.) Austral Ark: the state of wildlife in Australia and New Zealand. Cambridge University Press, Cambridge, UK, pp. 560-581.

Kittinger, John N., Cinner, Joshua E., Aswani, Shankar, and White, Alan T. (2014) Back to the future: integrating customary practices and institutions into comanagement of small-scale fisheries. In: Kittinger, John N., McClenachan, Loren, Gedan, Keryn B., and Blight, Louise K., (eds.) Marine Historical Ecology in Conservation: applying the past to manage for the future. University of California Press, Oakland, CA, USA, pp. 135-160.

Ban, Natalie C., Kittinger, John N., Pandolfi, John M., Pressey, Robert L., Thurstan, Ruth H., Lybolt, Matt J., and Hart, Simon (2014) Incorporating historical perspectives into systematic marine conservation planning. In: Kittinger, John N., McClenachan, Loren, Gedan, Keryn B., and Blight, Louise K, (eds.) Marine Historical Ecology in Conservation: applying the past to manage for the future. University of California Press, Oakland, CA, USA, pp. 207-233.

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Report

Harper, Sarah, and Kleiber, Danika (2023) Towards gender inclusivity and equality in small-scale fisheries. Report Section. FAO, Duke University & WorldFish, Rome, FAO; Durham, USA, Duke University; Penang, Malaysia, WorldFish..

Andrachuk, Mark, Epstein, Graham, Andriamalala, Gildas, Bambridge, Tamatoa, Ban, Natalie, Cheok, Jessica, Cunningham, Erica, Darling, Emily, Gurney, Georgina, Litsinger, Emilie, McIntosh, Emma, Mills, Morena, Morrison, Tiffany, Mangubhai, Sangeeta, Oates, Jenny, Pietri, Diana, Ruano Chamorro, Cristina, Sanchez Tirona, Rocky, Wabnitz, Colette, and Young, Jeff (2022) Coral reef governance: Strengthening community and collaborative approaches - A Vibrant Oceans Initiative Whitepaper. Working Paper. UNSPECIFIED, New York, NY, USA.

Kiatkoski Kim, Milena, Alvarez-Romero, Jorge, Wallace, Ken, Pannell, David, Hill, Rosemary, and Pressey, Robert (2021) Assessment of the Potential Changes in Wellbeing of Key Interest Groups in the Fitzroy River Catchment Under Alternative Development Scenarios: Traditional Owners' workshop. Report. The University of Western Australia, Perth, WA, Australia.

Kiatkoski Kim, Milena, Alvarez-Romero, Jorge, Wallace, Ken, Pannell, David, Douglas, Michael, and Pressey, Robert (2021) Assessment of the Potential Changes in Wellbeing of Key Interest Groups in the Fitzroy River Catchment Under alternative Development Scenarios: scenario team's workshop 3, Broome, Western Australia, 15–16 October. Report. The University of Western Australia, Perth, WA, Australia.

Hoey, A.S., Harrison, H., McClure, E.C., Burn, D., Barnett, A., Cresswell, B., Doll, P.C., Galbraith, G., and Pratchett, M.S. (2021) Coral Sea Marine Park Coral Reef Health Survey 2021: Report on reef surveys February 2021. Report. Parks Australia, Townsville, QLD, Australia.

Alvarez-Romero, Jorge G., Kim, Milena Kiatkoski, Pannell, David, Douglas, Michael, Wallace, Ken, Hill, Rosemary, Adams, Vanessa, Spencer-Cotton, Alaya, Kennard, Mark, and Pressey, Bob (2021) Future scenarios for the Fitzroy River catchment: summary of key findings relevant to the WA Government Discussion Paper. Report. James Cook University, Townsville, QLD, Australia.

Tilley, A., Cohen, P.J., Akester, M., Batalofo, M., Boso, M., Cinner, J., Dos Reis Lopes, J., Duarte, A., Eriksson, H., Gomese, C., Grantham, R., Hunnam, K., Khan, F., Kleiber, D., Lau, J., Lawless, S., Haque, A.B.M., Mills, D., Morrison, T., Nahiduzzaman, M., Patel, A., Pereira, M., Rahman, J., Ride, A., Saeni-Oeta, J., Smallhorn-West, P., Sukulu, M., Siota, F., Ullah, M.H., Wahab, A., Warren, R., Zaman, T., Beveridge, M.C.M., Marwaha, N., and Phillips, M. (2021) Increasing social and ecological resilience of coastal fisheries: program brief: FISH-2021-24. Report. WorldFish, Penang, Malaysia.

Álvarez-Romero, Jorge, Kiatkoski Kim, Milena, Buissereth, Rachel, Pressey, Robert L., Panell, David, Douglas, Michael M., and Spencer-Cotton, Alaya (2021) Looking back to look forward: a timeline of the Fitzroy River catchment. Report to the Australian Department of Agriculture, Water and the Environment. Report. James Cook University, Townsville, QLD, Australia.

Álvarez-Romero, Jorge G., Kiatkoski Kim, Milena, Pannell, David, Douglas, Michael M., Wallace, Ken, Hill, Rosemary, Adams, Vanessa M., Spencer-Cotton, Alaya, Kennard, Mark, and Pressey, Robert L. (2021) Multi-objective planning in northern Australia: co-benefits and trade-offs between environmental, economic, and cultural outcomes. Final report to the Australian Department of Agriculture, Water and the Environment. Report. James Cook University, Townsville, Queensland.

Kiatkoski Kim, Milena, Douglas, Michael, Pannell, David, Setterfield, Samantha, Hill, Rosemary, Jackson, Sue, Alvarez-Romero, Jorge, Laborde, Sarah, Beesley, Leah, and Canham, Caroline (2021) Transdisciplinary environmental research: trial and evaluation. Final report. Report. Northern Australia Environmental Resources Hub, Perth, WA, Australia.

Lau, Jacqueline, Sutcliffe, Sarah, and Hungito, Wilda (2020) Lived Experiences of Covid-19: Impacts on an Atoll Island Community, Papua New Guinea. Report. James Cook University, Townsville, QLD, Australia.

Cohen, Philippa J., Fernando, Achini Wathsala, Freed, Sarah, Garces, Len, Jayakody, Sevvandi, Khan, Firoz, Mam, Kosal, Nahiduzzaman, Md., Ramirez, Paul, Roscher, Matthew, Ullah, Md. Hadayet, van Brakel, Martin, Smallhorn-West, Patrick, and DeYoung, Cassandra (2020) Characteristics and performance of fisheries co-management in Asia: Synthesis of knowledge and case studies: Bangladesh, Cambodia, Philippines and Sri Lanka. External Commissioned Report. Food and Agriculture Organization of the United Nations, Penang, Malaysia.

Smallhorn-West, Patrick, Sheehan, Jason, Rodriguez-Troncoso, Alma Paola, Malimali, Siola’a, Halafihi, Tuikolongahau, Aisea, Latu, Mailau, Sione, Le'ota, Amanda, Ceccarelli, Daniela, Stone, Karen, Pressey, Bob, and Jones, Geoffrey (2020) Kingdom of Tonga Special Management Area Report 2020. Report. Kingdom of Tonga, Nuku'alofa, Tonga.

Pratchett, Morgan S., Caballes, Ciemon F., Messmer, Vanessa, Fletcher, Cameron S., and Westcott, David A. (2020) Movement patterns of Pacific crown-of-thorns starfish (Acanthaster cf. solaris) linked to habitat structure and prey availability. Report. Reef and Rainforest Research Centre, Cairns, Qld, Australia.

Pintor, Anna, Kennard, Mark, Álvarez-Romero, Jorge, and Hernandez, Stephanie (2019) Prioritising threatened species and threatening processes across northern Australia: user guide for data. Report. James Cook University, Townsville, QLD, Australia.

Boström‐Einarsson, Lisa, Ceccarelli, Daniela, Babcock, Russell C., Bayraktarov, Elisa, Cook, Nathan, Harrison, Peter, Hein, Margaux, Shaver, Elizabeth, Smith, Adam, Stewart-Sinclair, Phoebe J., Vardi, Tali, and McLeod, Ian M. (2018) Coral restoration in a changing world - a global synthesis of methods and techniques. Report. Reef and Rainforest Research Centre Ltd, Cairns.

Johnson, Johanna, Betram, Ian, Chin, Andrew, Moore, Bradley, Pratchett, Morgan, Welch, David, Williams, Ashley, Bell, Johann, and Govan, Hugh (2018) Effects of climate change on fish and shellfish relevant to Pacific Islands, and the coastal fisheries they support. Report. Centre for Environment, Fisheries and Aquaculture Science, Suffolk, UK.

Wenger, Amelia, Ahmadia, Gabby, Alvarez-Romero, Jorge, Barnes, Megan, Blythe, Jessica, Brodie, Jon, Day, Jonathan, Fox, Helen, Gill, David, Gomez, Nicole Auil, Gurney, Georgina, Holmes, Katherine, Jupiter, Stacy, Lamb, Joleah, Mangubhai, Sangeeta, Matthews, Elizabeth, Matthews, Kathryn, Pressey, Bob, Teneva, Leda, Tewfik, Alexander, Wells, Sue, and Darling, Emily (2017) Coral reef conservation solution-scape white paper. Report. Wildlife Conservation Society, New York, NY.

Waterhouse, Jane, Schaffelke, Britta, Bartley, Rebecca, Eberhard, Rachel, Brodie, Jon, Star, Megan, Thorburn, Peter, Rolfe, John, Ronan, Mike, Taylor, Bruce, and Kroon, Frederieke (2017) 2017 Scientific Consensus Statement: land use impacts on the Great Barrier Reef water quality and ecosystem condition. Report. State of Queensland.

Schaffelke, Britta, Collier, Catherine, Kroon, Frederieke, Lough, Janice, McKenzie, Len, Ronan, Mike, Uthicke, Sven, and Brodie, Jon (2017) 2017 Scientific Consensus Statement: land use impacts on the Great Barrier Reef water quality and ecosystem condition, Chapter 1: the condition of coastal and marine ecosystems of the Great Barrioer Reef and their responses to water quality and disturbances. Report Section. State of Queensland.

Bartley, Rebecca, Waters, David, Turner, Ryan, Kroon, Frederieke, Garzon-Garcia, Alex, Kuhnert, Petra, Lewis, Stephen, Smith, Rachel, Bainbridge, Zoe, Olley, Jon, Brooks, Andrew, Burton, Jo, Brodie, Jon, and Waterhouse, Jane (2017) 2017 Scientific Consensus Statement: land use impacts on the Great Barrier Reef water quality and ecosystem condition, Chapter 2: sources of sediment, nutrients, pesticides and other pollutants to the Great Barrier Reef. Report Section. State of Queensland.

Waterhouse, Jane, Brodie, Jon, Tracey, Dieter, Smith, Rachel, VanderGragt, Maria, Collier, Catherine, Petus, Caroline, Baird, Mark, Kroon, Frederieke, Mann, Reiner, Sutcliffe, Terri, Waters, Davis, and Adame, Fernanda (2017) 2017 Scientific Consensus Statement: land use impacts on the Great Barrier Reef water quality and ecosystem condition, Chapter 3: the risk from anthropogenic pollutants to Great Barrier Reef coastal and marine ecosystems. Report Section. State of Queensland.

Waterhouse, Jane, Schaffelke, Britta, Bartley, Rebecca, Eberhard, Rachel, Brodie, Jon, Star, Megan, Thorburn, Peter, Rolfe, John, Ronan, Mike, Taylor, Bruce, and Kroon, Frederieke (2017) 2017 Scientific Consensus Statement: land use impacts on the Great Barrier Reef water quality and ecosystem condition, Chapter 5: overview of key findings, management implications and knowledge gaps. Report Section. State of Queensland.

Heron, Scott F., Eakin, C. Mark, Douvere, Fanny, Anderson, Kristen, Day, Jon C., Geiger, Erick, Hoegh-Guldberg, Ove, van Hooidonk, Ruben, Hughes, Terry, Marshall, Paul, and Obura, David (2017) Impacts of climate change on World Heritage coral reefs: a first global scientific assessment. Report. UNESCO World Heritage Centre, Paris.

Gurney, Georgina G., and Darling, Emily S. (2017) A global social-ecological systems framework for coral reef fisheries: a practical monitoring handbook. Manual. Wildlife Conservation Society, New York, USA.

Stoeckl, Natalie, Grainger, Daniel, Esparon, Michelle, Farr, Marina, Larson, Silva, Kennard, Mark, Álvarez-Romero, Jorge G., Cattarino, Lorenzo, Adams, Vanessa, Douglas, Michael, Pressey, Bob, and Pannell, David (2016) Integrated models, frameworks and decision support tools to guide management and planning in Northern Australia. Final report. Report. James Cook University, Townsville, QLD, Australia.

Dale, Allan, Vella, Karen, Pressey, Robert L., Brodie, Jon, Gooch, Margaret, Potts, Ruth, and Eberhard, Rachel (2016) Monitoring and adaptively reducing system-wide governance risks facing the GBR: final report. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Álvarez-Romero, Jorge G. (2015) Catchment to Coast Planning: summary of key environmental management issues and activities undertaken by land managers in the Gilbert River catchment, Queensland, Australia. Report. James Cook University, Townsville, QLD, Australia.

Adams, Vanessa, Álvarez-Romero, Jorge, Crowley, Gabriel, Kennard, Mark, Capon, Samatha, and Pressey, Bob (2015) Planning for climate change northern monsoon cluster: decision making and planning for natural resource management. Report. James Cook University, Townsville, QLD, Australia.

Devlin, Michelle, Fabricius, Katharina, Negri, Andrew, Brodie, Jon, Waterhouse, Jane, Uthicke, Sven, Collier, Catherine, Pressey, Bob, Augé, Amélie, Reid, Ben, Woodberry, Owen, Zhao, Jian-xin, Clarke, Tara, Pandolfi, John, and Bennett, John (2015) Water quality synthesis of NERP tropical ecosystems hub GBR water quality research outputs 2011-2014. Report. Reef and Rainforest Research Centre, Cairns, Australia.

Stoeckl, Natalie, Farr, Marina, Jarvis, Diane, Larson, Silva, Esparon, Michelle, Sakata, Hana, Chaiechi, Taha, Liu, Hongbo, Brodie, Jon, Lewis, Stephen, Mustika, Putu, Adams, Vanessa, Chacon, Adriana, Bos, Melissa, Pressey, Bob, Kubiszewski, Ida, and Costanza, Bob (2014) The Great Barrier Reef World Heritage Area: its 'value' to residents and tourists, and the effect of world prices on it. Final report to the National Environmental Research Program. Report. Reef and Rainforest Research Centre, James Cook University, Cairns, QLD, Australia.

Arias, Adrian, Pressey, Robert L., Jones, Rhondda E., Álvarez-Romero, Jorge, and Cinner, Joshua E. (2014) Optimizando la Coacción y el Cumplimiento en Áreas Marinas Protegidas Oceánicas: el caso del Parque Nacional Isla del Coco, Costa Rica. Report. James Cook University, Townsville, QLD, Australia.

Hilbert, David W., Hill, Rosemary, Moran, Catherine, Turton, Steve M., Bohnet, Iris C., Marshall, Nadine A., Pert, Petina L., Stoeckl, Natalie, Murphy, Helen T., Reside, April E., Laurance, Susan G.W., Alamgir, Mohammed, Coles, Rob, Crowley, Gabriel, Curnock, Matthew, Dale, Allan, Duke, Norman C., Esparon, Michelle, Farr, Marina, Gillet, Sarah, Gooch, Margaret, Fuentes, Marianna, Hamann, Mark, James, Cassandra S., Kroon, Frederieke J., Larson, Silva, Lyons, Pethie, Marsh, Helene, Meyer Steiger, Dagmar, Sheaves, Marcus, and Westcott, David A. (2014) Key messages extracted from the Synthesis of Climate Change Issues and Impacts in the Wet Tropics NRM Cluster Region. Report. James Cook University, Cairns, QLD, Australia.

Brodie, Jon, Waterhouse, Jane, Maynard, Jeffrey, Bennett, John, Furnas, Miles, Devlin, Michelle, Lewis, Stephen, Collier, Catherine, Schaffelke, Britta, Fabricius, Katharina, Petus, Caroline, da Silva, Eduardo, Zeh, Daniel, Randall, Lucy, Brando, Vittorio, McKenzie, Len, O'Brien, Dominique, Smith, Rachael, Warne, Michael, Brinkman, Richard, Tonin, Hemerson, Bainbridge, Zoe, Bartley, Rebecca, Negri, Andrew, Turner, Ryan, Davis, Aaron, Bentley, Christie, Mueller, Jochen, Alvarez-Romero, Jorge, Henry, Nyssa, Waters, David, Yorkston, Hugh, and Tracey, Dieter (2013) Assessment of the relative risk of water quality to ecosystems of the Great Barrier Reef. A report to the Department of the Environment and Heritage Protection, Queensland Government, Brisbane - Report 13/28. Report. James Cook University, Townsville, QLD, Australia.

Albert, Joelle, Schwarz, Anne-Maree, and Cohen, Philippa (2013) Community-based marine resource management in Solomon Islands: a facilitators guide. Manual. WorldFish, Penang, Malaysia.

Augé, Amélie A. (2013) Conservation goals and objectives for the Great Barrier Reef coastal zone. Report. Reef and Rainforest Research Centre , Cairns, QLD, Australia.

Devlin, Michelle, Petus, Caroline, da Silva, Eduardo Teixera, Alvarez-Romero, Jorge, Zeh, Daniel, Waterhouse, Jane, and Brodie, Jon (2013) Mapping of exposure to flood plumes, water types and exposure to pollutants (DIN, TSS) in the Great Barrier Reef: toward the production of operational risk maps for the world's most iconic marine ecosystem. Report Section. James Cook University, Townsville, QLD.

Álvarez-Romero, Jorge G., Anadón, José, Beger, Maria, Castillo, Alejandro, Figueroa-Carranza, Ana Luisa, Gerber, Leah R., Godínez, Carlos Ramón, Gurney, Georgina, Arango, Gustavo Hinojosa, Kolb, Melanie, Mancha-Cisneros, Maria del Mar, Moreno, Marcia, Munguía-Vega, Adrián, Morzaira-Luna, Hem Nalini, Petatán, David, Pfister, Tad, Bonilla, Héctor Reyes, Suárez-castillo, Alvni N., and Torre-Cosio, Jorge (2013) Red de reservas marinas para la Región de las Grandes Islas, Golfo de California: protocolo del proyecto de planeación y reporte de los talleres del equipo de planeación [Marine reserves network for the Midriff Islands Region, Gulf of California, Mexico: planning protocol and progress report to the WWF Mexico & Carlos Slim Foundation Alliance]. Report. James Cook University (JCU) and Comunidad y Biodiversidad A.C. (COBI), Townsville, QLD, Australia.

Rivera Posada, Jairo, and Pratchett, Morgan (2012) Pathogenesis in crown-of-thorns starfish (Acanthaster planci L): importance in outbreak dynamics and opportunities for controlling populations. Report. NERP, Tropical Environmental Hub, Townsville, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Waterhouse, Jane, Alvarez-Romero, Jorge, Abbott, Brett, and da Silva, Eduardo Teixeira (2012) Reef Rescue Marine Monitoring Program: flood plume monitoring annual report 2010-11: incorporating results from the Extreme Weather Response Program flood plume monitoring. Report. James Cook University, Townsville, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Petus, Caroline, da Silva, Eduardo Teixeira, Debose, Jennifer, and Álvarez-Romero, Jorge (2012) Reef Rescue Monitoring Program: final report of JCU activities 2011/12: flood plumes and extreme weather monitoring for the Great Barrier Reef Marine Park Authority. Report. James Cook University, Townsville, QLD, Australia.

Ratner, Blake D., Barman, Benoy, Cohen, Philippa, Kosal, Mam, Nagoli, Joseph, and Allison, Edward H. (2012) Strengthening governance across scales in aquatic agricultural systems. Working Paper. WorldFish Center, Penang, Malaysia.

Rivera Posada, Jairo, and Prachett, Morgan (2012) A review of existing control efforts for Acanthaster planci: limitations to successes. Report. NERP, Tropical Environmental Hub, Townsville, QLD, Australia.

Fuentes, Mariana, and Hawkes, Lucy (2011) How will sea turtles cope with climate change? Report Section. State of the World's Sea Turtles, USA.

Kool, Johnathan, Brewer, Tom, Mills, Morena, and Pressey, Robert (2010) Ridges to Reefs Conservation for Solomon Islands. Report. ARC Centre of Excellence for Coral Reef Studies, Townsville, QLD, Australia.

Marshall, N.A., Marshall, P.A., Tamelander, J., Obura, D., Malleret-King, D., and Cinner, J.E. (2010) A Framework for Social Adaptation to Climate Change: Sustaining Tropical Coastal Communities and Industries. Report. International Union for Conservation of Nature and Natural Resources, Gland, Switzerland.

MacIntyre, Martha, and Foale, Simon (2010) Mining and cultural loss: assessing and mitigating impacts in Papua New Guinea. Report Section. Earthscan, London, UK.

MacIntyre, Martha, and Foale, Simon (2010) Countering Fish Stock Depletion Through Traditional Knowledge, Tenure and Use of Marine Resources in Papua New Guinea. Report Section. Earthscan, London.

Baldwin, Ken, England, Matthew, Hoegh-Guldberg, Ove, Hughes, Terry, Karoly, David, Lough, Janice, Lynch, Amanda, McCulloch, Malcolm, Nicholls, Neville, Pitman, Andy, Possingham, Hugh, Quiggin, John, and Steffen, Will (2009) Emissions Reduction Targets and the Great Barrier Reef. Report. Federation of Australian Scientific and Technological Societies, Canberra.

Hoegh-Guldberg, Ove, Hoegh-Guldberg, Hans, Veron, John E., Green, Alison, Gomez, Edgardo D., Lough, Janice, King, Melanie, Ambariyanto , Dr., Hansen, Lara, Cinner, Josh, Dews, Geoff, Russ, Garry, Schuttenberg, Heidi Z., Peñaflor, Eileen L., Eakin, C. Mark, Christensen, Tyler R.L., Abbey, Michael, Areki, Francis, Kosako, Rosemary A., Tewfik, Alexander , and Oliver, Jamie (2009) The Coral Triangle and Climate Change: ecosystems, people and societies at risk. Report. WWF Australia, Sydney, NSW, Australia.

Taylor, Martin F.J., Adams, Vanessa M., Segan, Daniel B., and Pressey, Robert L. (2009) 20 million hectares by 2020: protected areas, green infrastructure and green jobs for Queensland. Report. WWF-Australia, Sydney, NSW, Australia.

Hobday, Alistair, Mapstone , Bruce, Connolly, R, Hughes, Terry, Marshall, Paul, McDonald, Jan, and Waschka, Maria (2009) Enhancing species adaptation to climate change. Report. NCCARF Publication 05/09, Canberra, Australia .

Foale, Simon (2009) A Review of Ecosystem Approach to Fisheries within The Nature Conservancy’s Community Engagement Processes in Melanesia. Report. The Nature Conservancy, Online.

Munday, Philip L., Cheal, Alistair J., Graham, Nicholas A.J., Meekan, Mark, Pratchett, Morgan S., Sheaves, Marcus, Sweatman, Hugh, and Wilson, Shaun K. (2009) Tropical coastal fish. Report Section. National Climate Change Adaptation Research Plans.

Boyle, M.J., Alvarez-Romero, J.G., and Hughes, T.P. (2008) Ningaloo Coast World Heritage Nomination: a comparative analysis with similar properties. Report. Australian Research Council Centre of Excellence for Coral Reef Studies, Townsville, QLD, Australia.

Srinivas, V. , Baird, Andrew, Kerr, Alexander, and Ram, Sunita (2008) Coastal Bio-shields and their Putative Role During Large Weather Related Disturbance Events IN: Bhalla, R.S, Ram, Sunita and Srinivas, V. (eds) Studies on Vulnerability and Habitat Restoration along the Coromandel Coast. Report Section. FERAL, UNDP-UNTRS, Pondicherry, India .

Ceccarelli, D., Choat, J.H., Ayling, A., Richards, Z.T., Van Herwerden, L., Ewel, G.D., Hobbs, J-P., and Cuff, B. (2008) Coringa-Herald National Nature Reserve Marine Survey 2007. Report. Department of the Environment, Water, Heritage and the Arts, Canberra, ACT, Australia.

Cinner, Joshua, and Fuentes, Marianna (2008) Human Dimensions of Madagascar's Marine Protected Areas. Report Section. Coastal Oceans Research and Development in the Indian Ocean, Mombasa, Kenya.

Foale, Simon (2007) Social and economic context of marine resource depletion in Gagil and Maap, Yap State, FSM. Report. Secretariat of the Pacific Regional Environment Programme, Samoa.

Foale, Simon (2005) Sharks, sea slugs and skirmishes : managing marine and agricultural resources on small, overpopulated islands in Milne Bay, PNG. Working Paper. Australian National University, Canberra, Australia.

Fuentes, Marianna, and Marsh, Helene (2012) Informing dugong hunting management in torres strait by studying dugong movements and habitat usage. Report. James Cook University, Townsville. (Unpublished)

Conference Item

Kophamel, Sara, Illing, Bjorn, Ariel, Ellen, Ward, Leigh C., Mendez, Diana, Skerratt, Lee F., Hamann, Mark, Difalco, Morgan, and Munns, Suzanne (2021) Global conservation implications for health assessment studies in non-captive wildlife. In: [Presented at CUENCA 2021]. 51. p. 178. From: CUENCA 2021: 69th Wildlife Disease Association (WDA)/14th European Wildlife Disease Association (EWDA) Joint Virtual Conference, 30 August - 2 September 2021, Online.

Yusuf, S., Zamani, N.P., Jompa, J., and Junior, M.Z. (2019) Larvae of the Coral Acropora tenuis (Dana 1846) settle under controlled light intensity. In: IOP Conference Series: Earth and Environmental Science (253) 012023. From: MarSave International Symposium 2018: "Strengthening Marine Resilience for Sustainable Development Goals'', 7–8 August 2018, Makassar, South Sulawesi, Indonesia.

Carter, Alexandra, Coles, Robert, Grech, Alana, McKenna, Skye, Rasheed, Michael, McKenzie, Len, and Duke, Norman (2019) Spatial data as a baseline for managing coastal seagrasses in Queensland, Australia. In: [Presented at the CERF Biennial Conference]. From: The 25th Biennial CERF Conference, 3–7 November, 2019, Mobile, AL, USA.

Lambert, V., Adams, M.P., Collier, C., Carter, A., Saunders, M., Brodie, J., Bainbridge, Z., Rasheed, M., Turner, R., and O'Brien, K.R. (2019) Towards ecologically relevant targets: impact of flow and sediment discharge on seagrass communities in the Great Barrier Reef. In: Proceedings of the 22nd International Congress on Modelling and Simulation. pp. 624-630. From: 23rd International Congress on Modelling and Simulation, 1-6 December 2019, Canberra, ACT, Australia.

Jones, D.B., Zenger, K.R., Khatkar, M.S., Raadsma, H.W., van der Steen, H.A.M., Prochaska, J., Fôret, S., and Jerry, D.R. (2017) Development of a low density commercial genotyping array for the white legged shrimp, Litopenaeus vannamei. In: Proceedings of the Conference of the Association for the Advancement of Animal Breeding and Genetics. pp. 117-120. From: AAABG 2017: 22nd Conference of the Association for the Advancement of Animal Breeding and Genetics, 2-5 July 2017, Townsville, QLD, Australia.

Lemberget, Tove, Meade, Clair, Morton, Stephanie, Gibbons, Anna, and Ferguson, Kathryn (2017) Keeping an institutional repository relevant. In: Posters from the Open Respositories Conference. 260. From: OR2017: Open Repositories Conference, 27-30 June 2017, Brisbane, QLD, Australia.

Brotánková, Jana, Urli, Tommaso, and Kilby, Philip (2016) Planning habitat restoration with genetic algorithms. In: Proceedings of the Genetic and Evolutionary Computation Conference. pp. 861-868. From: GECCO 16: Genetic and Evolutionary Computation Conference, 20-24 July 2016, Denver, CO, USA.

Urli, Tommaso, Brotánková, Jana, Kilby, Philip, and Van Hentenryck, Pascal (2016) Intelligent habitat restoration under uncertainty. In: Proceedings of the 30th AAAI Conference on Artificial Intelligence. pp. 3908-3914. From: AAAI-16: 30th AAAI Conference on Artificial Intelligence, 12-17 February 2016, Phoenix, AZ, USA.

Hixon, M.A., Cinner, J.E., Feary, D.A., Green, A.L., Hamilton, R.J., Jones, Geoff, and Jupiter, S.D. (2016) Reef fish ecology, conservaton, and fisheries: the scientific legacy of Glenn Almany. In: Proceedings of the 13th International Coral Reef Symposium. 20. pp. 159-168. From: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Rummer, Jodie (2015) Effects of ocean acidification on metabolic performance in coral reef fishes. In: [Presented at 145th Annual Meeting of the American Fisheries Society]. From: AFS 2015: 145th Annual Meeting of the American Fisheries Society, 16-20 August 2015, Portland, OR, USA.

Hess, Sybille, Wenger, Amelia, Ainsworth, Tracy, and Rummer, Jodie (2015) Too turbid for nemo: suspended sediment impacts gills and favours pathogenic bacteria in clownfish larvae. In: [Presented at 145th Annual Meeting of the American Fisheries Society]. From: AFS 2015: 145th Annual Meeting of the American Fisheries Society, 16-20 August 2015, Portland, OR, USA.

Brotankova, Jana, Randall, Marcus, Lewis, Andrew, Pressey, Bob, and Wenger, Amelia (2015) A genetic algorithm solver for pest management control in island systems. In: Proceedings of the First Australasian Artificial Life and Computational Intelligence Conference (8955) pp. 273-285. From: ACALCI 2015: First Australasian Artificial Life and Computational Intelligence Conference, 5-7 February 2015, Newcastle, NSW, Australia.

Augé, Amélie A., Maughan, Mirjam, Pressey, Robert L., Brodie, Jon, Dale, Allan, and Yorkston, Hugh (2013) Spatially explicit scenarios for conservation planning in the Great Barrier Reef coastal zone, Australia. In: Proceedings of the CoastGIS Conference 2013: monitoring and adapting to change on the coast. pp. 179-182. From: CoastGIS 2013: 11th International Symposium for GIS and Computer Cartography for Coastal Zone Management, 18-21 June 2013, Victoria, BC, Canada.

Bohnet, I.C., Hill, R., Turton, S.M., Bell, R., Hilbert, D.W., Hinchley, D., Pressey, R.L., Rainbird, J., Standley, P-M., Cvitanovic, C., Crowley, G., Curnock, M., Dale, A., Lyons, P, Moran, C., and Pert, P.L. (2013) Supporting Regional Natural Resource Management (NRM) organisations to update their NRM plans for adaptation to climate change. In: Proceedings of the 20th International Congress on Modelling and Simulation. pp. 2214-2220. From: MODSIM2013: 20th International Congress on Modelling and Simulation, 1-6 December 2013, Adelaide, SA, Australia.

Arias, Adrian, and Sutton, Stephen G. (2012) Understanding recreational fishers' compliance with no-take zones in the Great Barrier Reef Marine Park. In: F1000Posters. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Paley, Allison S., and Bay, Line K. (2012) Bleaching condition varies among Acropora millepora color morphs. In: Proceedings of the 12th International Coral Reef Symposium. 9A_9. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

McCowan, Dominique M., Pratchett, Morgan S., and Baird, Andrew H. (2012) Bleaching susceptibility and mortality among corals with differing growth forms. In: Proceedings of the 12th International Coral Reef Symposium. 9A_7. pp. 1-6. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Beltran, Victor H., Dunlap, Walter C., and Long, Paul F. (2012) Comparison of the photosynthetic bleaching response of four coral species common to the central GBR. In: Proceedings of the 12th International Coral Reef Symposium. 9A_3. pp. 1-6. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Wia, Jane, Januchowski-Hartley, Fraser, Lahari, Rachael U., Morove, Tau, Perks, Helen M., and Holmes, Katherine E. (2012) Coral farming as means of sustaining livelihoods and promoting resource management. In: Proceedings of the 12th International Coral Reef Symposium. 17C_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Chua, Chia-Miin, Schupp, Peter, Leggat, William, and Baird, Andrew (2012) Effects of ocean acidification on metamorphosis: brooding and spawning larvae. In: Proceedings of the 12th International Coral Reef Symposium. 8D_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Coles, Robert, Grech, Alana, Rasheed, Michael, and McKenzie, Len (2012) Evaluating risk to seagrasses in the Tropical Indo-Pacific Region. In: Proceedings of the 12th International Coral Reef Symposium. 15B_2. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Baird, Andrew H., Emslie, Michael J., and Lewis, Andrew R. (2012) Extended periods of coral recruitment on the Great Barrier Reef. In: Proceedings of the 12th International Coral Reef Symposium. 12A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Devlin, Michelle, Wenger, Amelia, Da Silva, Eduardo, Alvarez Romero, Jorge G., Waterhouse, Jane, and McKenzie, Len (2012) Extreme weather conditions in the Great Barrier Reef: drivers of change? In: Proceedings of the 12th International Coral Reef Symposium. 21A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Heron, Scott, Pressey, Robert L., Skirving, William J., Rauenzahn, Jacqueline L., Parker, Britt-Anne A., and Eakin, C. Mark (2012) Identifying oceanic thermal anomalies in the coral triangle region. In: Proceedings of the 12th International Coral Reef Symposium. 17D_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Pratchett, Morgan, Hoey, Andrew, Coker, Darren, and Gardiner, Naomi (2012) Interdependence between reef fishes and scleractinian corals. In: Proceedings of the 12th International Coral Reef Symposium. 13C_3. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Doshi, Amar, Pascoe, Sean, Thébaud, Olivier, Thomas, Colette R., Setiasih, Naneng, Hong, James Tan Chun, True, James, Schuttenberg, Heidi Z., and Heron, Scott F. (2012) Loss of economic value from coral bleaching in S.E. Asia. In: Proceedings of the 12th International Coral Reef Symposium. 22D_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Tan, James C.H., Pratchett, Morgan S., Bay, Line K., and Baird, Andrew H. (2012) Massive coral mortality following a large flood event. In: Proceedings of the 12th International Coral Reef Symposium. 11E_1. pp. 1-4. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Cappo, Mike, Stowar, Marcus, Stieglitz, Thomas, Lawrey, Eric, Johansson, Charlotte, and Macneil, Aaron (2012) Measuring and communicating effects of MPAs on deep "shoal" fisheries. In: Proceedings of the 12th International Coral Reef Symposium. 18A_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Woolsey, Erika (2012) Self-fertilization suppresses thermal tolerance in embryos of reef-building coral. In: Proceedings of the 12th International Coral Reef Symposium. 12A_5. pp. 1-4. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Anderson, Kristen, Pratchett, Morgan, and Baird, Andrew (2012) Summer growth rates of corals at Lord Howe Island, Australia. In: Proceedings of the 12th International Coral Reef Symposium. 4C_1. pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Carter, Alex, Carton, Guy, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2011) Significant variation in spawning frequency of common coral trout, Plectropomus leopardus, on the Great Barrier Reef. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association. p. 35. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Adams, Vanessa M., and Pressey, Robert L. (2011) An info‐gap model to examine the robustness of cost‐efficient budget allocations. In: Vulnerability, Uncertainty, and Risk: analysis, modeling, and management. Proceedings of the ICVRAM 2011 and ISUMA 2011 Conferences. pp. 971-979. From: ICVRAM-ISUMA 2011 International Conference on Vulnerability and Risk Analysis and Management and International Symposium on Uncertainty Modeling and Analysis, 11-13 April 2011, Hyattsville, MD, USA.

Ardiwijaya, Rizya, Baird, Andrew, Kartawijaya, Tasrif, and Campbell, Stuart (2010) Changes in reef fish biomass in Karimunjawa National Park: a test of the effectiveness of government gazetted marine parks in Indonesia. In: Proceedings of the 11th International Coral Reef Symposium. pp. 1064-1068. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Bhagooli, R, Baird, Andrew, and Ralph, Peter (2010) Does the coral host protect its algal symbionts from heat and light stresses? In: Proceedings of the 11th International Coral Reef Symposium. pp. 113-117. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Baird, A.H., Bhagooli, R., Nonaka, M., Yakovleva, I., Yamamoto, H.H., Hidaka, M., and Yamasaki, H. (2010) Environmental controls on the establishment and development of algal symbiosis in corals. In: Proceedings of the 11th International Coral Reef Symposium. pp. 108-112. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Ban, Natalie, Royle, Krista, Short, Charlie, Davis, Neil, Bodtker, Karin, Bryan, Tanya, Cripps, Ken, Day, Andrew, Haggarty, Dana, Lee, Lynn, Manson, Murray, Nicolson, Dave, Rasmussen, Glen, and Ladell, Kate Willis (2010) Identifying priority areas for marine conservation in British Columbia: a collaborative approach. In: Proceedings of the Sixth International Conference of Science and the Management of Protected Areas. pp. 251-262. From: Sixth International Conference of Science and the Management of Protected Areas, 21-26 May 2007, Wolfville, Nova Scotia, Canada.

McClanahan, T.R., Sebastian, C. Ruiz, Cinner, J., Maina, J., Wilson, S., and Graham, N.A.J. (2010) Managing fishing gear to encourage ecosystem-based management of coral reefs fisheries. In: Proceedings of the 11th International Coral Reef Symposium. pp. 1012-1016. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Rosser, N. L. , and Baird, A.H. (2010) Multi-specific coral spawning in spring and autumn in far north-western Australia. In: Proceedings of the 11th International Coral Reef Symposium. pp. 366-370. From: 11th International Coral Reef Symposium, 7 - 11 July 2008, Fort Lauderdale, FL, USA.

Herdiana, Yudi, Campbell, Stuart, and Baird, Andrew (2010) Systematic marine conservation planning: towards a marine representative areas network in Nanggruh Aceh Darussalam, Indonesia. In: Proceedings of the 11th International Coral Reef Symposium. pp. 1112-1115. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Paris, C.B., Aldana-Aranda, D., Perez-Perez, M., and Kool, J. (2009) Connectivity of Queen conch, Strombus gigas, populations from Mexico. In: Proceedings of the 11th International Coral Reef Symposium. pp. 439-443. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Coker, D.J., Pratchett, M.S., and Munday, P.L. (2009) Does body colouration influence predation risk of coral dwelling reef fish in bleached landscapes? In: Proceedings of the 11th Coral Reef Symposium. pp. 1281-1285. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Alvarez-Romero, Jorge, and Pressey, Bob (2009) Integrated land-sea planning: an operational framework. In: [Presented at the 2nd International Marine Protected Areas Congress]. pp. 1-17. From: International Marine Conservation Congress and 2nd International Marine Protected Areas Congress, 19-24 May 2009, Washington, DC, USA.

Pratchett, M.S., Baird, A.H., McCowan, D.M., Coker, D.J., Cole, A.J., and Wilson, S.K. (2009) Protracted declines in coral cover and fish abundance following climate-induced coral bleaching on the Great Barrier Reef. In: Proceedings of the 11th Coral Reef Symposium. 1042- 1046. From: 11th International Coral Reef Symposium, 7 July - 11 July 2008, Fort Lauderdale, Florida, USA.

Fabinyi, Michael (2009) The political aspects of resilience. In: Proceedings of the 11th International Coral Reef Symposium, Ft. Lauderdale, Florida, 7–11 July 2008 (2) Session number 21. pp. 977-981. From: 11th International Coral Reef Symposium, 07 - 11 July 2008, Fort Lauderdale, FL, USA.

Broderick, Kathleen, and Ferguson, Kathryn (2007) Postcards from the edge. In: Papers from Australia ICOMOS Extreme Heritage Conference. pp. 1-17. From: Australia ICOMOS Extreme Heritage Conference, 19-21 July 2007, Cairns, QLD.

Muehlig-Hofmann, Annette, Veitayaki, Joeli, Polunin, Nicholas V.C., Stead, Selina, and Graham, Nicholas (2006) Community-based marine resource management in Fiji – from yesterday to tomorrow. In: Proceedings of the 10th International Coral Reef Symposium 2004 (1) pp. 1259-1266. From: 10th International Coral Reef Symposium 2004, 28 June - 2 July 2004, Okinawa, Japan.

Baird, Andrew H., Gilmour, James P., Kamiki, Takayuki M., Nonaka, Masanori, Pratchett, Morgan S., Yamamoto, Hiromi H., and Yamasaki, Hideo (2006) Temperature tolerance of symbiotic and non-symbiotic coral larvae. In: Proceedings of the 10th International Coral Reef Symposium. pp. 38-42. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa, Japan.

Fidelman, Pedro I.J., Morrison, R. John, and West, Ron J. (2004) Catchment management planning in coastal areas: some preliminary insights from New South Wales, Australia. In: Proceedings of the Coastal Zone Asia Pacific Conference 04. pp. 221-226. From: Coastal Zone Asia Pacific Conference 04, 5 - 9 September, 2004, Brisbane, QLD, Australia.

Fidelman, Pedro, Morrison, John, and West, Ron (2004) Coastal issues in regional Natural Resource Management Plans: the case of the New South Wales Catchment Blueprints. In: Papers from Coast to Coast 2004 Conference. pp. 1-6. From: Coast to Coast 2004 Conference, 19-23 April 2004, Hobart, TAS, Australia.

Pratchett, M.S., Baird, A.H., and Marquis, C.P. (2002) Comparative palatability among eggs of mass-spawning corals. In: Proceedings of the Ninth International Coral Reef Symposium (1) pp. 391-394. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia.

Book

Bartelet, Henry (2021) 珊瑚礁系统动力学 / Coral Reef System Dynamics. China Ocean Press, Beijing, China.

Loya, Yossi, Puglise, Kimberely A., and Bridge, Tom C.L. (2019) Mesophotic Coral Ecosystems. Coral Reefs of the World, 12 . Springer, Cham, Switzerland.

Hoey, Andrew S., and Bonaldo, Roberta M. (2018) Biology of Parrotfishes. CRC Press, Boca Raton, FL, USA.

Sheppard, Charles, Davy, Simon, Pilling, Graham, and Graham, Nicholas (2018) The Biology of Coral Reefs. Biology of Habitats . Oxford University Press, Oxford, UK, pp. 1-370.

Bartelet, Henry A. (2017) Coral Reef Dynamics. DynaMundo Publishing, Spokane, WA, USA.

Pratchett, Morgan S., Berumen, Michael L., and Kapoor, B.G. (2014) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA.

Yellowlees, D., and Hughes, T.P. (2012) Proceedings of the 12th International Coral Reef Symposium. International Coral Reef Symposia . James Cook University.

Fabinyi, Michael (2012) Fishing for Fairness: Poverty, Morality and Marine Resource Regulation in the Philippines. Asia-Pacific Environment Monograph 7 . ANU E-Press, Canberra, ACT, Australia.

Fuentes, Mariana (2012) Dhyum the Dugong. Reef & Rainforest Research Centre, Cairns, Australia.

Muchlisin, Z.A., Baird, Andrew H., Nayaya, Ahmad, Musman, Musri, Mudatsir, Sugito, and Alvisyahrin, Teuku (2011) Proceeding of Annual International Conference Syiah Kuala University 2011. Syiah Kuala University Press, Banda Aceh, Indonesia.

McClanahan, Tim R., and Cinner, Joshua E. (2011) Adapting to a changing environment: confronting the consequences of climate change. Oxford University Press, New York, NY, USA.

Bell, Johann D., Johnson, Johanna E., Ganachaud, Alex S., Gehrke, Peter C., Hobday, Alistair J., Hoegh-Guldberg, Ove, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Tim, Pratchett, Morgan S., and Waycott, Michelle (2011) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change: summary for Pacific Island Countries and Territories. Secretariat of the Pacific Community, New Caledonia, Noumea.

Thesis

Blandford, Makeely Isabel (2023) Effects of habitat fragmentation on coral-associated fish assemblages. PhD thesis, James Cook University.

Lang, Bethan Jade (2023) Impacts of ocean warming on the Pacific crown-of-thorns starfish (Acanthaster cf.solaris). PhD thesis, James Cook University.

Wheeler, Carolyn Rose (2023) Quantifying life history energetics of an oviparous elasmobranch subject to future warming water. PhD thesis, James Cook University.

Narvaez, Pauline (2022) Cleaning symbiosis and the disease triangle. PhD thesis, James Cook University.

Panero, Marta (2022) Gorgonian spatial distributions, ecological interactions with fish assemblages and responses to their decline in health. Masters (Research) thesis, James Cook University.

Kemink, Kaylan Marie (2022) Sharpening the skein: assessing and targeting perpetual private land conservation programs. PhD thesis, James Cook University.

Zoeller, Kim (2022) Understanding the production of cultural ecosystem services and benefits. PhD thesis, James Cook University.

Thomas, Jodi Thea (2022) The neurobiological effects of ocean acidification on a cephalopod. PhD thesis, James Cook University.

Horowitz, Jeremy (2022) The taxonomy, biodiversity, and evolutionary history of black corals (order Antipatharia). PhD thesis, James Cook University.

Zamborain Mason, Jessica (2021) Assessing the sustainability of multispecies coral reef fisheries around the globe. PhD thesis, James Cook University.

Sambrook, Katie (2021) Beyond the reef: the influence of seascape structure on the composition and function of tropical fish communities. PhD thesis, James Cook University.

Kuek, Felicity W.I. (2021) Dimethylsulphoniopropionate (DMSP) metabolism within the coral holobiont. PhD thesis, James Cook University.

Hannan, Kelly D. (2021) Effects of diel pCO₂ fluctuations on coral reef fishes now and into the future. PhD thesis, James Cook University.

Cramp, Jessica E. (2021) Evaluating the effectiveness of large-scale marine reserves on wide-ranging sharks: a case study of the Cook Islands Shark Sanctuary. PhD thesis, James Cook University.

Lawless, Sarah M. (2021) Gender equality in Pacific small-scale fisheries governance: current progress and future prospects. PhD thesis, James Cook University.

Downie, Adam Tyler (2021) How do coral reef fishes develop into athletes? PhD thesis, James Cook University.

Mizrahi, Meira (2021) Maximising potential impact of Marine Protected Area placement: an integrated socioeconomic perspective. PhD thesis, James Cook University.

Grantham, Ruby W. (2021) Seasonal dynamics in ecosystem services: a case study of small-scale fisheries. PhD thesis, James Cook University.

Galbraith, Gemma Frances (2021) The ecology of fishes on submerged pinnacle coral reefs. PhD thesis, James Cook University.

McMahon, Shannon J. (2021) The effects of climate change on the growth and physiology of reef snappers. PhD thesis, James Cook University.

Chawla, Sivee (2021) An investigation of the spatial influences and governance implications of social-ecological heterogeneity, connectivity, and scale on landscape change. PhD thesis, James Cook University.

Montalvo-Proano, Jose L. (2020) Beneficial acclimation and stress-hardening of corals to climate change conditions. PhD thesis, James Cook University.

Burn, Deborah (2020) Differential susceptibility of corals to major versus routine disturbances in Australia's Coral Sea. Masters (Research) thesis, James Cook University.

Terraneo, Tullia Isotta (2020) Diversity, phylogeography and taxonomy of hard corals in the genus Porites. PhD thesis, James Cook University.

Bouyoucos, Ian Alexander (2020) Ecological energetics of climate change for tropical sharks. PhD thesis, James Cook University.

Day, Jonathan (Jon) C. (2020) Ensuring effective and transformative policy reform: lessons from rezoning Australia's Great Barrier Reef, 1999-2004. PhD thesis, James Cook University.

Spijkers, Jessica (2020) Global patterns of international fisheries conflict. PhD thesis, Stockholm University and James Cook University.

Aird, Samantha Jayne (2020) Socio-ecological dynamics in mollusc fisheries: a case study from the Keppel Bay Islands, Great Barrier Reef, Australia. PhD thesis, James Cook University.

Wilmes, Jennifer Christina (2020) Spatial and temporal variation in the demography of early-stage juvenile Pacific crown-of-thorns starfish (Acanthaster cf. solaris) from Australia's Great Barrier Reef. PhD thesis, James Cook University.

Lapointe, Marie (2020) Urbanization and human-nature relationships: a comparison of urban and rural dwellers' perceptions of ecosystem services in the Solomon Islands. PhD thesis, James Cook University.

Graba-Landry, Alexia (2020) The effect of increasing temperature on algae-fish interactions on coral reefs. PhD thesis, James Cook University.

Siqueira Correa, Alexandre (2020) The evolution, macroecology and biogeography of coral reef fishes: a trophic perspective. PhD thesis, James Cook University.

Dietzel, Andreas (2020) The viability of coral populations in the Anthropocene. PhD thesis, James Cook University.

Sacre, Edmond (2019) Developing spatial prioritisation strategies to maximise conservation impact. PhD thesis, James Cook University.

Al Moajil-Cole, Grace (2019) Exploring the role of microbes in coral-algal interactions on the inshore Great Barrier Reef. Masters (Research) thesis, James Cook University.

Prescott, Leteisha A. (2019) Gills develop early in coral reef fishes: respiratory and ionoregulatory processes. Masters (Research) thesis, James Cook University.

Matthews, Samuel (2019) Modelling tools to support the management of crown-of-thorns starfish (Acanthaster cf. solaris) on Australia's Great Barrier Reef. PhD thesis, James Cook University.

Laubenstein, Taryn Diane (2019) Relationships between behavioral and physiological performance under elevated CO₂ in marine fishes. PhD thesis, James Cook University.

Maire, Eva (2019) Socio-ecological drivers of fish biomass on coral reefs: the importance of accessibility, protection and key species. PhD thesis, James Cook University.

Scott, Molly (2019) Spatial and temporal variation in movement patterns and behaviour of a large, coral reef mesopredator, Plectropomus leopardus, on the Great Barrier Reef, Australia. PhD thesis, James Cook University.

Nay, Tiffany (2019) Temperature preferences of tropical fishes and the influence of local abiotic and biotic factors. PhD thesis, James Cook University.

Hess, Sybille (2019) The effects of suspended sediments on the physiology and performance of coral reef fishes. PhD thesis, James Cook University.

Lau, Jacqueline (2019) 'The reef is our garden' expanding analysis of ecosystem services in coastal communities. PhD thesis, James Cook University.

Hernández Agreda, Alejandra Isabel (2018) Deciphering the bacterial microworld in corals: structure, variability and persistence. PhD thesis, James Cook University.

Mbaru, Emmanuel Kakunde (2018) Diffusion of a gear-based conservation innovation: adoption patterns and social - ecological outcomes. PhD thesis, James Cook University.

Roberts, Thomas Edward (2018) Ecological determinants of depth zonation in reef-building corals. PhD thesis, James Cook University.

Epstein, Hannah Elizabeth (2018) Investigating the drivers of microbial community composition in reef-building corals. PhD thesis, James Cook University.

Richardson, Laura Elizabeth (2018) Variation in structure and function of reef fish assemblages among distinct coral habitats. PhD thesis, James Cook University.

McWilliam, Mike (2018) The functional diversity and redundancy of corals. PhD thesis, James Cook University.

Kuo, Chao-Yang (2017) Adaptive strategies in reef-building corals. PhD thesis, James Cook University.

Hempson, Tessa N. (2017) Coral reef mesopredator trophodynamics in response to reef condition. PhD thesis, James Cook University.

Caballes, Ciemon Frank (2017) Environmental influences on the reproductive biology and early life history of the crown-of-thorns starfish. PhD thesis, James Cook University.

Walsh, Melissa Sue (2017) Marine conservation finance: strategies and finance mechanisms to improve the amount and efficacy of investment into marine conservation. PhD thesis, James Cook University.

Cowan, Zara-Louise (2017) Predation on the early life stages of the crown-of-thorns starfish (Acanthaster cf. solaris). PhD thesis, James Cook University.

Arias, Adrian (2016) Avoiding and reversing "paper parks": integrating fishers' compliance into marine conservation efforts. PhD thesis, James Cook University.

Quigley, Kate M. (2016) Genetic and environmental basis for Symbiodinium specificity in the coral-dinoflagellate symbiosis. PhD thesis, James Cook University.

Waldie, Peter Anthony (2016) Investigating spatial aspects of the community-based management of a small-scale artisanal grouper fishery. PhD thesis, James Cook University.

Wessels, Wiebke (2016) Molecular bases of soft coral reproduction. PhD thesis, James Cook University.

Anderson, Kristen Deanna (2016) Temporal and spatial variation in the growth of branching corals. PhD thesis, James Cook University.

Welch, Megan Joan (2016) Transgenerational acclimation and adaptation of reef fishes to ocean acidification. PhD thesis, James Cook University.

Almeida Magris, Rafael (2015) Advancing conservation planning for persistence: design of a conservation strategy for Brazilian coral reefs. PhD thesis, James Cook University.

Hamel, Mélanie A. (2015) Coral-reef conservation planning in regions with high resource dependence: integrating lessons from socioeconomic and biodiversity approaches. PhD thesis, James Cook University.

Pisapia, Chiara (2015) Spatial, temporal and taxonomic variation in the incidence of partial mortality among reef-building corals. PhD thesis, James Cook University.

Gurney, Georgina Grace (2015) Understanding and integrating socioeconomic factors into the design and management of marine protected areas. PhD thesis, James Cook University.

Nash, Kirsty L. (2014) Assessment of scale dependent function in reef fish, and application to the evaluation of coral reef resilience. PhD thesis, James Cook University.

Woolsey, Erika S. (2014) Coral larval ecology and biogeography in a warming ocean. PhD thesis, James Cook University.

Chong-Seng, Karen Michelle (2014) Ecological structure and processes on disturbed coral reefs. PhD thesis, James Cook University.

Ban, Stephen Shigeyoshi (2014) Multiple stressor effects on coral reefs. PhD thesis, James cook University.

Horigue, Vera Christine (2014) Scaling up to form marine protected area networks: the role of coordination of initiatives and institutional collaborations in the Philippines. PhD thesis, James Cook University.

Hicks, Christina Chemtai (2013) Ecosystem service values and societal settings for coral reef governance. PhD thesis, James Cook University.

Hartley, Fraser Andrew (2013) Fear of fishers: anti-predator behaviour of coral reef fish and its relevance to fisheries management and conservation. PhD thesis, James Cook University.

Bradbury, Dominique (2013) Inter- and intra- specific variation in bleaching susceptibility among scleractinian corals. PhD thesis, James Cook University.

Brewer, Tom David (2013) Social determinants of the exploitation and management of coral reef resources in Solomon Islands. PhD thesis, James Cook University.

Trapon, Melanie Lea (2013) Variation in early post-settlement growth and mortality of scleractinian corals. PhD thesis, James Cook University.

Cohen, Philippa Jane (2013) The contribution of locally managed marine areas to small-scale fisheries and food security: a Solomon Islands case study. PhD thesis, James Cook University.

Bauman, Andrew Geoffrey (2013) The ecology and dynamics of coral reef communities in an extreme reef environment: the southern Persian Gulf. PhD thesis, James Cook University.

Rivera Posada, Jairo A. (2012) Pathogenesis of crown-of-thorns starfish (Acanthaster planci L). PhD thesis, James Cook University.

Coker, Darren J. (2012) The importance of live coral habitat for reef fishes and its role in key ecological processes. PhD thesis, James Cook University.

Visconti, Piero (2011) Addressing new challenges in dynamic conservation planning. PhD thesis, James Cook University.

Cole, Andrew (2011) Energetic costs of chronic fish predation on reef-building corals. PhD thesis, James Cook University.

Lawton, Rebecca Joy (2011) Geographic variation in ecology of coral feeding butterflyfishes and resilience to large scale disturbances. PhD thesis, James Cook University.

Adams, Vanessa Marie (2011) Incorporating socio-economic considerations into systematic conservation planning. PhD thesis, James Cook University.

Mills, Morena (2011) Planning for action: bridging the gap between systematic conservation planning and conservation action. PhD thesis, James Cook University.

Biggs, Duan (2011) The resilience of coral reef tourism to global change and crises. PhD thesis, James Cook University.

Dornelas, Maria Ana Azeredo de (2006) Coral assemblages and neutral theory. PhD thesis, James Cook University.

Daley, Benjamin (2005) Changes in the Great Barrier Reef since European settlement: implications for contemporary management. PhD thesis, James Cook University.

Cinner, Joshua Eli (2005) The role of socioeconomic factors in customary coral reef management in Papua New Guinea. PhD thesis, James Cook University.

Creative Work

Álvarez-Romero, Jorge, and Buissereth, Rachel (2021) Looking back to look forward: a timeline of the Fitzroy River catchment, Story Map. [Creative Work]

Foale, Simon, and Kelley, Russell (2012) Fish and people. [Creative Work]

Other

Alvarez-Romero, Jorge, and Osbaldiston, Justin (2021) ValueMapper: an interactive web-based tool to map and visualise spatial data. James Cook University, Townsville, QLD, Australia.

Munday, Philip L, Dixson, Danielle L., Welch, Megan J., Chivers, Douglas P., Domenici, Paolo, Grosell, Martin, Heuer, Rachael M., Jones, Geoffrey P., McCormick, Mark I., Meekan, Mark, Nilsson, Göran E., Ravasi, Timothy, and Watson, Sue-Ann (2020) Additional material associated with the Matters Arising article published in Nature by Munday and colleagues. James Cook University, Townsville, QLD, Australia. (Unpublished)

This list was generated on Sun Dec 22 22:28:13 2024 AEST.