Saper, Julia, Høj, Lone, Humphrey, Craig, and Bourne, David G. (2023) Quantifying capture and ingestion of live feeds across three coral species. Coral Reefs, 42. pp. 931-943.

Illing, Bjorn, Severati, Andrea, Hochen, Justin, Boyd, Paul, Raison, Paulin, Mather, Rachel, Downie, Adam T., Rummer, Jodie L., Kroon, Frederieke J., and Humphrey, Craig (2021) Automated flow control of a multi-lane swimming chamber for small fishes indicates species-specific sensitivity to experimental protocols. Conservation Physiology, 9 (1). coaa131.

Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Heyward, Andrew (2021) Co-culture with grazers can improve survival and growth of multiple coral species. Aquaculture, 544. 737095.

Barton, Jonathan A., Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2021) Efficacy of chemical treatments for Acropora-eating flatworm infestations. Aquaculture, 532. 735978.

Barton, Jonathan A., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2020) Biological controls to manage Acropora-eating flatworms in coral aquaculture. Aquaculture Environment Interactions, 12. pp. 61-66.

Barton, Jonathan A., Bourne, David G., Humphrey, Craig, and Hutson, Kate S. (2020) Parasites and coral-associated invertebrates that impact coral health. Reviews in Aquaculture, 12 (4). pp. 2284-2303.

Barton, Jonathan A., Hutson, Kate S., Bourne, David G., Humphrey, Craig, Dybala, Cat, and Rawlinson, Kate A. (2019) The life cycle of the Acropora coral-eating flatworm (AEFW), Prosthiostomum acroporae; the influence of temperature and management guidelines. Frontiers in Marine Science, 6. 524.

Kenkel, Carly D., Moya, Aurelie, Strahl, Julia, Humphrey, Craig, and Bay, Line K. (2018) Functional genomic analysis of corals from natural CO2‐seeps reveals core molecular responses involved in acclimatization to ocean acidification. Global Change Biology, 24 (1). pp. 158-171.

Jarrold, Michael D., Humphrey, Craig, McCormick, Mark I., and Munday, Philip L. (2017) Diel CO2 cycles reduce severity of bahavioural abnormalities in coral reef fish under ocean acidification. Scientific Reports, 7.

Rocker, Melissa M., Noonan, Sam, Humphrey, Craig, Moya, Aurelie, Willis, Bette L., and Bay, Line K. (2015) Expression of calcification and metabolism-related genes in response to elevated pCO(2) and temperature in the reef-building coral Acropora millepora. Marine Genomics, 24 (Part 3). pp. 313-318.

Morrow, Kathleen M., Bourne, David G., Humphrey, Craig, Botté, Emmanuelle S., Laffy, Patrick, Zaneveld, Jesse, Uthicke, Sven, Fabricius, Katharina E., and Webster, Nicole S. (2014) Natural volcanic CO2 seeps reveal future trajectories for host-microbial associations in corals and sponges. ISME Journal: multidisciplinary journal of microbial ecology, 9 (4). pp. 894-908.

Noonan, Sam H.C., Fabricius, Katharina E., and Humphrey, Craig (2013) Symbiodinium Community Composition in Scleractinian Corals Is Not Affected by Life-Long Exposure to Elevated Carbon Dioxide. PLoS ONE, 8 (5). e63985.

Lambrechts, J., Humphrey, C., McKinna, L., Gourge, O., Fabricius, K.E., Mehta, A.J., Lewis, S., and Wolanski, E. (2010) Importance of wave-induced bed liquefaction in the fine sediment budget of Cleveland Bay, Great Barrier Reef. Estuarine, Coastal and Shelf Science , 89 (2). pp. 154-162.

Cooper, Timothy F., Ridd, Peter V., Ulstrup, Karin E., Humphrey, Craig, Slivokoff, Matthew, and Fabricius, Katharina E. (2008) Temporal dynamics in coral bioindicators for water quality on coastal coral reefs of the Great Barrier Reef. Marine and Freshwater Research, 59 (8). pp. 703-716.

Wolanski, Eric, Fabricius, Katharina E., Cooper, Timothy F., and Humphrey, Craig (2008) Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef. Estuarine, Coastal and Shelf Science , 77 (4). pp. 755-762.

Humphrey, C., Weber, M., Lott, C., Cooper, T., and Fabricius, K. (2008) Effects of suspended sediments, dissolved inorganic nutrients and salinity on fertilisation and embryo development in the coral Acropora millepora (Ehrenberg, 1834). Coral Reefs, 27 (4). pp. 837-850.

Cooper, Timothy F., Uthicke, Sven, Humphrey, Craig, and Fabricius, Katharina E. (2007) Gradients in water column nutrients, sediment parameters, irradiance and coral reef development in the Whitsunday Region, central Great Barrier Reef. Estuarine, Coastal and Shelf Science, 74 (3). pp. 458-470.

Markey, Kathryn L., Baird, Andrew H., Humphrey, Craig, and Negri, Andrew P. (2007) Insecticides and a fungicide affect multiple coral life stages. Marine Ecology Progress Series, 330. pp. 127-137.

Humphrey, Craig, Klumpp, David W., and Pearson, Richard (2003) Early development and growth of the eastern rainbowfish, Melanotaenia splendida splendida (Peters)I. Morphogenesis and ontogeny. Marine and Freshwater Research, 54 (1). pp. 17-25.