Pham, Tuan D., and Golledge, Jonathan (2013) Pattern analysis of imaging markers in abdominal aortic aneurysms. In: Proceedings of the 6th International Conference on Biomedical Engineering and Informatics (1) pp. 154-159. From: BMEI 2013: 6th International Conference on Biomedical Engineering and Informatics, Hangzhou, China, 16-18 December 2013.

Pham, Tuan D., Salvetti, Federica, Wang, Bing, Diani, Marco, Heindel, Walter, Knecht, Stefan, Wersching, Heinke, Baune, Bernhard T., and Berger, Klaus (2011) The hidden-Markov brain: comparison and inference of white matter hyperintensities on magnetic resonance imaging (MRI). Journal of Neural Engineering, 8 (1). 016004. pp. 1-10.

Pham, Tuan D., Elfiqi, Heba Z., Knecht, Stefan, Wersching, Heike, Baune, Bernhard T., and Berger, Klaus (2010) Structural simplexity of the brain. Journal of Neuroscience Methods, 188 (1). pp. 113-126.

Pham, Tuan D., Eisenblätter, Uwe, Golledge, Jonathan, Baune, Bernhard T., and Berger, Klaus (2010) Segmentation of medical images using geo-theoretic distance matrix in fuzzy clustering. In: Proceedings of the 16th IEEE International Conference on Image Processing (ICIP). pp. 3369-3372. From: 16th IEEE International Conference on Image Processing (ICIP), 7-10 November 2009, Cairo, Egypt.

Pham, Tuan D., Eisenblättera, Uwe, Baune, Bernhard T., and Berger, Klaus (2009) Preprocessing film-copied MRI for studying morphological brain changes. Journal of Neuroscience Methods, 180 (2). pp. 352-362.

Pham, Tuan D., Tran, Dat T., and Zhou, Xiaobo (2007) Fuzzy information fusion of classification models for high-throughput image screening of cancer cells in time-lapse microscopy. International Journal of Knowledge-Based and Intelligent Engineering Systems, 11 (4). pp. 237-246.

Yu, Donggang, Pham, Tuan D., Yan, Hong, Zhang, Bailing, and Crane, Denis I. (2007) Segmentation of cultured neurons using logical analysis of grey and distance difference. Journal of Neuroscience Methods, 166 (1). pp. 125-137.

Yan, Hong, and Pham, Tuan D. (2007) Spectral estimation techniques for DNA sequence and microarray data analysis. Current Bioinformatics, 2 (2). pp. 145-156.

Pham, Tuan D. (2007) Spectral distortion measures for biological sequence comparisons and database searching. Pattern Recognition, 40 (2). pp. 516-529.

Yu, Donggang, Pham, Tuan D., and Zhou, Xiaobo (2007) Analysis and recognition of touching cell images based on morphological structures. In: Apolloni, Bruno, Howlett, Robert J., and Jain, Lakhmi, (eds.) Knowledge-Based Intelligent Information and Engineering Systems. Lecture Notes in Computer Science, 4692 . Springer, Berlin, Germany, pp. 439-446.

Zhang, Bailing, Pham, Tuan D., and Zhang, Yanchun (2007) Bagging support vector machine for classification of SELDI-TOF mass spectra of ovarian cancer serum samples. In: Orgun, Mehmet A., and Thornton, John, (eds.) AI 2007: Advances in Artificial Intelligence. Lecture Notes in Computer Science, 4830 . Springer, Berlin, Germany, pp. 820-826.

Pham, Tuan D. (2007) Double adaptive filtering of Gaussian noise degraded images. In: Proceedings of the 15th Scandinavian Conference 2007 (4522) pp. 848-857. From: 15th Scandinavian Conference on Image Analysis 2007, 10-14 June 2007, Aalborg, Denmark.

Pham, Tuan (2007) Fractal characteristics of mass spectrometry based cancer data. In: Proceedings of the 3rd WSEAS International Conference on Cellular and Molecular Biology, Biophysics and Bioengineering (BIO '07). pp. 30-35. From: 3rd WSEAS International Conference on Cellular and Molecular Biology, Biophysics and Bioengineering (BIO '07), 26-28 Aug 2007, Athens, Greece.

Pham, Tuan D. (2007) Geo-thresholding for segmentation of fluorescent microscopic cell images. In: Perner, Petra, and Salvetti, Ovidio, (eds.) Advances in Mass Data Analysis of Signals and Images in Medicine, Biotechnology and Chemistry. Lecture Notes in Computer Science, 4826 . Springer, Berlin, Germany, pp. 15-26.

Pham, Tuan D. (2007) Mass spectrometry based cancer classification using fuzzy fractal dimensions. In: Rueda, Luis, Mery, Domingo, and Kittler, Josef, (eds.) Progress in Pattern Recognition, Image Analysis and Applications. Lecture Notes in Computer Science, 4756 . Springer, Berlin, Germany, pp. 614-623.

Pham, Tuan D. (2007) Matching and fusing signal-estimation errors for similarity-based pattern classification. WSEAS Transactions on Systems, 6 (1). pp. 125-132.

Tran, Dat T., Pham, Tuan D., Zhou, Xiaobo, and Wong, Stephen T.C. (2007) Modeling methods for cell phase classification. In: Pham, Tuan D., Yan, Hong, and Crane, Denis I., (eds.) Advanced Computational Methods for Biocomputing and Bioimaging. Nova Science Publishers, New York, USA, pp. 143-166.

Zhang, Bailing, Pham, Tuan D., and Zhang, Yanchun (2007) Ovarian cancer identification from mass spectra by Kernel Fisher Discriminant Analysis. In: Proceedings of the 2007 International Symposium on Computational Models for Life Sciences (952) pp. 187-196. From: Computational Models for Life Sciences (CMLS '07) 2007 International Symposium, 17-19 December 2007, Queensland, Australia.

Pham, Tuan (2007) Predictive modeling in proteomics-based disease detection. In: Proceedings of the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. pp. 3308-3311. From: 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 23-26 August 2007, Lyon, France.

Yu, Donggang, Pham, Tuan D., Yan, Hong, Lai, Wei, and Crane, Denis I. (2007) Segmentation and reconstruction of cultured neuron skeleton. In: Proceedings of the 2007 International Symposium of Computational Models for Life Sciences (952) pp. 21-30. From: Computational Models for Life Sciences - CMLS '07: 2007 International Symposium, 17-19 December 2007, Queensland, Australia.

Yu, Donggang, Pham, Tuan D., Zhou, Xiaobo, and Wong, Stephen T.C. (2007) Segmentation, recognition and tracing analysis for high-content cell-cycle screening. In: Proceedings of the 2007 International Symposium on Computational Models for Life Sciences (952) pp. 66-75. From: Computational Models for Life Sciences (CMLS '07) 2007 International Symposium, 17-19 December 2007, Queensland, Australia.

Yu, Donggang, Pham, Tuan, and Zhou, Xiaobo (2007) Tracing and recognition of cell phases. In: Proceedings of the 3rd WSEAS International Conference on Cellular and Molecular Biology, Biophysics and Bioengineering (BIO '07). pp. 36-41. From: 3rd WSEAS International Conference on Cellular and Molecular Biology, Biophysics and Bioengineering (BIO '07), 26-28 Aug 2007, Athens, Greece.

Pham, Tuan D., Tran, Dat T., Zhou, X., and Wong, Stephen T.C. (2007) A microscopic image classification system for high-throughput cell-cycle screening. International Journal of Intelligent Computing in Medical Sciences and Image Processing, 1 (1). pp. 67-77.

Pham, Tuan D., and Zhou, Xiaobo (2007) A novel image feature for nuclear-phase classification in high content screening. In: Proceedings of the International Conference on Mass Data Analysis of Images and Signals in Medicine, Biotechnology and Chemistry (4826) pp. 84-93. From: International Conference on Mass Data Analysis of Signals and Images in Medicine, Biotechnology and Chemistry, 18 July 2007, Leipzig, Germany.

Yu, Donggang, Pham, Tuan D., and Crane, Denis I. (2007) A region analysis approach for segmenting neural-cell images. In: Proceedings of the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. pp. 5529-5532. From: 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 23-26 August 2007, Lyon, France.

Pham, Tuan, Beck, Dominik, and Yan, Hong (2006) Spectral pattern comparison methods for cancer classification based on microarray gene expression data. IEEE Transactions on Circuits and Systems Part 1: Regular Papers, 53 (11). pp. 2425-2430.

Pham, Tuan D. (2006) LPC Cepstral distortion measure for protein sequence comparison. IEEE Transactions on Nanobioscience, 5 (2). pp. 83-88.

Pham, Tuan D. (2006) Handling missing DNA microarray data by kriging estimators. International Journal of Bioinformatics Research and Applications, 2 (2). pp. 177-192.

Pham, Tuan D., Tran, Dat T., Zhou, Xiaobo, and Wong, Stephen T.C. (2006) Integrated algorithms for image analysis and classification of nuclear division for high-content cell-cycle screening. International Journal of Computational Intelligence and Applications, 6 (1). pp. 21-43.

Tran, Dat T., and Pham, Tuan D. (2006) A combined Markov and noise clustering modeling method for cell phase classification. WSEAS Transactions on Biology and Biomedicine, 3 (3). pp. 161-166.

Pham, Tuan, Wells, Christine, and Crane, Denis I. (2006) Analysis of microarray gene expression data. Current Bioinformatics, 1 (1). pp. 37-53.

Pham, Tuan D., Tran, Dat T., Zhou, Xiaobo, and Wong, Stephen T.C. (2006) Classification of cell phases in time-lapse images by vector quantization and markov models. In: Grier, Erik V., (ed.) Neural Stem Cell Research. Nova Science, New York, USA, pp. 155-174.

Yu, Donggang, Pham, Tuan D., Yan, Hong, and Crane, Denis I. (2006) Dynamic analysis and recognition of cell-cycle screening based on morphological structures. In: Proccedings of Sixth International Conference on Intelligent Systems Design and Applications (2) pp. 1043-1048. From: ISDA 2006 Sixth International Conference on Intelligent Systems Design and Applications, 16-18 October 2006, Jinan, China.

Pham, Tuan, and Tran, Dat T. (2006) Gaussian mixture and Markov models for cell-phase classification in microscopic imaging. In: Proceedings of the 2006 IEEE International Conference on System of Systems Engineering. pp. 328-333. From: 2006 IEEE International Conference on System of Systems Engineering, 24-26 April 2006, Los Angeles, CA, USA.

Pham, Tuan, and Tran, Dat T. (2006) Image classification by fusion for high-content cell-cycle screening. In: Proceedings of KES 2006 10th International Conference (4251) pp. 524-531. From: KES 2006 10th International Conference, 9-11 October 2006, Bournemouth, UK.

Pham, Tuan D., and Yan, Hong (2006) LPC-VQ based hidden Markov models for similarity searching in DNA sequences. In: Proceedings of IEEE International Conference on Systems, Man and Cybernetics 2006 (2) pp. 1654-1659. From: SMC '06 IEEE International Conference on Systems, Man, and Cybernetics 2006, 8-11 October 2006, Taipei, Taiwan.

Pham, Tuan, Wang, Honghui, Zhou, Xiaobo, Beck, Dominik, Brandl, Miriam, Hoehn, Gerard, Azok, Joseph, Brennan, Marie-Luise, Hazen, Stanley L., Li, King, and Wong, Stephen T.C. (2006) Linear predictive coding and its decision logic for early prediction of major adverse cardiac events using mass spectrometry data. In: Proceedings of the 2006 workshop on Intelligent systems for bioinformatics (73) pp. 61-66. From: 2006 Workshop on Intelligent Systems for Bioinformatics (WISB 2006), 4 December 2006, Hobart, TAS, Australia.

Yu, Donggang, Pham, Tuan D., Yan, Hong, and Crane, Denis I. (2006) Quantification of neural images using grey difference. In: Proceedings of the Intelligent Systems for Bioinformatics 2006 (73) pp. 73-80. From: 2006 Workshop on Intelligent Systems for Bioinformatics, 4 December 2006, Hobart, TAS, Australia.

Tran, Dat T., and Pham, Tuan D. (2006) Relaxation labeling for cell phase identification. In: Proceedings of the 2006 IEEE International Conference on Systems, Man and Cybernetics (2) pp. 1275-1280. From: SMC'06 IEEE International Conference on Systems, Man and Cybernetics 2006, 8-11 October 2006, Taipei, Taiwan.

Pham, Tuan D., Chandramohan, Vikram, Zhou, Xiaobo, and Wong, Stephen T.C. (2006) Robust feature extraction and reduction of mass spectrometry data for cancer classification. In: Proceedings of the Sixth IEEE International Conference on Data Mining - Workshops. pp. 202-206. From: ICDMW'06 Sixth IEEE International Conference on Data Mining - Workshops, 18-22 December 2006, Hong Kong.

Pham, Tuan D. (2006) Similarity searching in DNA sequences by spectral distortion measures. In: Proceedings of the 6th Industrial Conference on Data Mining (4065) pp. 24-37. From: ICDM 2006 6th Industrial Conference on Data Mining, 14-15 July 2006, Leipzig, Germany.

Pham, Tuan D. (2006) Spatial linear predictive coding and its error matching for signal classification. In: Proceedings of the 8th WSEAS International Conference on Mathematical Methods and Computational Techniques in Electrical Engineering. pp. 276-281. From: MMACTEE 06 8th WSEAS International Conference on Mathematical Methods and Computational Techniques in Electrical Engineering, 16-18 October 2006, Bucharest, Romania.

Pham, Tuan D. (2006) Spectral analysis of protein sequences. In: Proceedings of ICMLC 2005 International Conference on Machines and Cybernetics (3930) pp. 595-604. From: ICMLC 2005 International Conference on Machines and Cybernetics, 18-21 August 2005, Guangzhou, China.

Yan, Hong, and Pham, Tuan (2006) Spectral similarity for analysis of DNA microarray time-series data. International Journal of Data Mining and Bioinformatics, 1 (2). pp. 150-161.

Tran, Dat, and Pham, Tuan (2005) Cell phase classification using Markov and Gaussian mixture models. In: Proceedings of the 2005 Asia-Pacific Workshop on Visual Information Processing. pp. 48-52. From: 2005 Asia Pacific Workshop on Visual Information Processing, 11-13 December 2005, Kowloon, Hong Kong.

Tran, Dat, Pham, Tuan, and Zhou, Xiaobo (2005) Cell phase identification using fuzzy Gaussian mixture models. In: Proceedings of the 2005 International Symposium on Intelligent Signal Processing and Communication Systems. pp. 465-468. From: 2005 International Symposium on Intelligent Signal Processing and Communication Systems, 13 - 16 December 2005, Hong Kong.

Pham, Tuan D., Beck, Dominik, and Crane, Denis I. (2005) Fuzzy clustering of stochastic models for molecular phylogenetics. WSEAS Transactions on Biology and Biomedicine, 2 (1). pp. 87-91.

Tran, Dat T., and Pham, Tuan D. (2005) Fuzzy estimation of priors in speaker recognition. WSEAS Transactions on Circuits and Systems, 4 (4). pp. 369-373.

Pham, Tuan D., Beck, Dominik, and Crane, Denis (2005) Hidden Markov models for unaligned DNA sequence comparison. WSEAS Transactions on Biology and Biomedicine, 2 (1). pp. 64-69.

Pham, Tuan D., Tran, Dat T., Brown, Marianne, and Kennedy, R. Lee (2005) Image segmentation of retinal vessels by fuzzy models. In: Proceedings of the 2005 International Symposium on Intelligent Signal Processing and Communication Systems. pp. 541-544. From: 2005 International Symposium on Intelligent Signal Processing and Communication Systems, 13 - 16 December 2005, Hong Kong.

Pham, Tuan D. (2005) Integration of fuzzy and geostatistical models for estimating missing multivariate observations. WSEAS Transactions on Systems, 4 (4). pp. 233-237.

Tran, Dat T., and Pham, Tuan D. (2005) Markov and fuzzy models for written language verification. WSEAS Transactions on Systems, 4 (4). pp. 268-272.

Pham, Tuan D., and Crane, Denis I. (2005) Segmentation of neuronal-cell images from stained fields and monomodal histograms. In: Proceedings of the 27th Annual International Conference of the IEEE Engineering in Medicine & Biology Society 2005 (6) pp. 6289-6292. From: 27th Annual International Conference of the IEEE Engineering in Medicine & Biology Society 2005, 1-4 September 2005, Shanghai, China.

Pham, Tuan D., Tran, Dat T., Zhou, Xiaobo., and Wong, Stephen T.C. (2005) An automated procedure for cell-phase imaging identification. In: Proceedings of the 18th Australian Joint Conference on Artificial Intelligence. pp. 52-59. From: 18th Australian Joint Conference on Artificial Intelligence, 5-9 December 2005, Sydney, NSW, Australia.

Pham, Tuan D., and Byung-Sub, Shim (2005) A cepstral distortion measure for protein comparison and identification. In: Proceedings of the 2005 International Conference on Machine Learning and Cybernetics (9) pp. 5609-5614. From: 2005 International Conference on Machine Learning and Cybernetics, 18-21 August 2005, Guangzhou, China.

Pham, Tuan D. (2005) An optimally weighted fuzzy k-nn algorithm. In: Proceedings of the 3rd International Conference on Advances in Pattern Recognition 2005 (3686) pp. 239-247. From: 3rd International Conference on Advances in Pattern Recognition 2005, 22-25 August 2005, Bath, United Kingdom.