Bradley, Michael, Nagelkerken, Ivan, Baker, Ronald, Travers, Michael, and Sheaves, Marcus (2022) Local Environmental Context Structures Animal-Habitat Associations Across Biogeographic Regions. Ecosystems, 25. pp. 237-251.

Colombano, Denise D., Litvin, Steven Y., Ziegler, Shelby L., Alford, Scott B., Baker, Ronald, Barbeau, Myriam A., Cebrián, Just, Connolly, Rod M., Currin, Carolyn A., Deegan, Linda A., Lesser, Justin S., Martin, Charles W., McDonald, Ashley E., McLuckie, Catherine, Morrison, Blair H., Pahl, James W., Risse, L. Mark, Smith, Joseph A.M., Staver, Lorie W., Turner, R. Eugene, and Waltham, Nathan J. (2021) Climate change implications for tidal marshes and food web linkages to estuarine and coastal nekton. Estuaries and Coasts, 44. pp. 1637-1648.

Bradley, Michael, Nagelkerken, Ivan, Baker, Ronald, and Sheaves, Marcus (2020) Context dependence: a conceptual approach for understanding the habitat relationships of Coastal Marine Fauna. BioScience, 70 (11). pp. 986-1004.

Baker, Ronald, Taylor, Matthew D., Able, Kenneth W., Beck, Michael W., Cebrian, Just, Colombano, Denise D., Connolly, Rod M., Currin, Carolyn, Deegan, Linda A., Feller, Ilka C., Gilby, Ben L., Kimball, Matthew E., Minello, Thomas J., Rozas, Lawrence P., Simenstad, Charles, Turner, R. Eugene, Waltham, Nathan J., Weinstein, Michael P., Ziegler, Shelby L., zu Ermgassen, Philine S.E., Alcott, Caitlin, Alford, Scott B., Barbeau, Myriam A., Crosby, Sarah C., Dodds, Kate, Frank, Alyssa, Goeke, Janelle, Goodridge Gaines, Lucy A., Hardcastle, Felicity E., Henderson, Christopher J., James, W. Ryan, Kenworthy, Matthew D., Lesser, Justin, Mallick, Debbrota, Martin, Charles W., McDonald, Ashley E., McLuckie, Catherine, Morrison, Blair H., Nelson, James A., Norris, Gregory S., Ollerhead, Jeff, Pahl, James W., Ramsden, Sarah, Rehage, Jennifer S., Reinhardt, James F., Rezek, Ryan J., Risse, L. Mark, Smith, Joseph A.M., Sparks, Eric L., and Staver, Lorie W. (2020) Fisheries rely on threatened salt marshes. Science, 370 (6517). pp. 670-671.

Baker, Ronald, Barnett, Adam, Bradley, Michael, Abrantes, Katya, and Sheaves, Marcus (2019) Contrasting seascape use by a coastal fish assemblage: a multi-method approach. Estuaries and Coasts, 42 (1). pp. 292-307.

Donaldson, James A., Drews, Paulo, Bradley, Michael, Morgan, David L., Baker, Ronald, and Ebner, Brendan C. (2019) Countering low visibility in video survey of an estuarine fish assemblage. Pacific Conservation Biology, 26 (2). pp. 190-200.

Dubuc, Alexia, Waltham, Nathan J., Baker, Ronald, Marchand, Cyril, and Sheaves, Marcus (2019) Patterns of fish utilisation in a tropical IndoPacific mangrove-coral seascape, New Caledonia. PLoS ONE, 14 (4). e0207168.

Eurich, J.G., Matley, J.K., Baker, R., McCormick, M.I., and Jones, G.P. (2019) Stable isotope analysis reveals trophic diversity and partitioning in territorial damselfishes on a low-latitude coral reef. Marine Biology, 166 (2). 17.

Baker, Ronald, Bradley, Michael, Freddi, Stefano, Abrantes, Katya, Barnett, Adam, and Sheaves, Marcus (2018) Non-lethal aging of tropical catch-and-release sport fishery species. Fisheries Research, 207. pp. 110-117.

Buelow, Christina A., Baker, Ronald, Reside, April E., and Sheaves, Marcus (2018) Nutrient subsidy indicators predict the presence of an avian mobile-link species. Ecological Indicators, 89. pp. 507-515.

Buelow, Christina A., Reside, April E., Baker, Ronald, and Sheaves, Marcus (2018) Stable isotopes reveal opportunistic foraging in a spatiotemporally heterogeneous environment: bird assemblages in mangrove forests. PLoS ONE, 13 (11). e0206145.

Templeman, Shelley, Williams, Chris, Gainsford, Ashton, and Baker, Ronnie (2017) Woodcutters Mine. Receiving Environment Monitoring Program. 1 Nov 2015 to 31 Oct 2016. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Dunbar, Kimberley, Baker, Ronnie, and Sheaves, Marcus (2017) Effects of forest width on fish use of fringing mangroves in a highly urbanised tropical estuary. Marine and Freshwater Research, 68 (9). pp. 1764-1770.

Templeman, Shelley, Baker, Ronnie, and James, Cassandra (2017) Carpentaria Gold Receiving Environment Monitoring Program design version 2: report 17/33. Report. James Cook University, Townsville, QLD, Australia.

Bradley, Michael, Baker, Ronnie, and Sheaves, Marcus (2017) Hidden components in tropical seascapes: deep-estuary habitats support unique fish assemblages. Estuaries and Coasts, 40 (4). pp. 1195-1206.

Buckland, Amanda, Baker, Ronald, Loneragan, Neil, and Sheaves, Marcus (2017) Standardising fish stomach content analysis: the importance of prey condition. Fisheries Research, 196. pp. 126-140.

Templeman, Shelley, Williams, Christopher, and Baker, Ronnie (2016) Carpentaria Gold Receiving Environment Monitoring Program 1 Nov 2015 to 31 Oct 2016 Report 16/57. Report. Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER), Townsville, QLD, Australia.

Sheaves, Marcus, Johnston, Ross, and Baker, Ronald (2016) Use of mangroves by fish: new insights from in-forest videos. Marine Ecology Progress Series, 549. pp. 167-182.

Sheaves, Marcus, Baker, Ronnie, Abrantes, Kátya G., and Connolly, Rod M. (2016) Fish biomass in tropical estuaries: substantial variation in food web structure, sources of nutrition and ecosystem-supporting processes. Estuaries and Coasts, 40 (2). pp. 580-593.

Buelow, Christina A., Baker, Ronald, Reside, April E., and Sheaves, Marcus (2016) Spatial dynamics of coastal forest bird assemblages: the influence of landscape context, forest type, and structural connectivity. Landscape Ecology, 32 (3). pp. 547-561.

Barnett, Adam, Abrantes, Kátya G., Baker, Ronald, Diedrich, Amy S., Farr, Marina, Kuilboer, Alf, Mahony, Tracey, McLeod, Ian, Moscardo, Gianna, Prideaux, Murray, Stoeckl, Natalie, van Luyn, Ariella, and Sheaves, Marcus (2016) Sportfisheries, conservation and sustainable livelihoods: a multidisciplinary guide to developing best practice. Fish and Fisheries, 17 (3). pp. 696-713.

Sheaves, M., Baker, R., McLeod, I., Abrantes, K., Wani, J., and Barnett, A. (2016) The conservation status of Niugini black bass: a world-renowned sport fish with an uncertain future. Fisheries Management and Ecology, 23 (3-4). pp. 243-252.

Abrantes, Kátya G., Barnett, Adam, Baker, Ronald, and Sheaves, Marcus (2015) Habitat-specific food webs and trophic interactions supporting coastal-dependent fishery species: an Australian case study. Reviews in Fish Biology and Fisheries, 25 (2). pp. 337-363.

Sheaves, Marcus, Baker, Ronald, Nagelkerken, Ivan, and Connolly, Rod M. (2015) True value of estuarine and coastal nurseries for fish: incorporating complexity and dynamics. Estuaries and Coasts, 38 (2). pp. 401-414.

Baker, Ronald, Sheaves, Marcus, and Johnston, Ross (2015) Geographic variation in mangrove flooding and accessibility for fishes and nektonic crustaceans. Hydrobiologia, 762 (1). pp. 1-14.

Nagelkerken, Ivan, Sheaves, Marcus, Baker, Ronald, and Connolly, Rod M. (2015) The seascape nursery: a novel spatial approach to identify and manage nurseries for coastal marine fauna. Fish and Fisheries, 16 (2). pp. 362-371.

Baker, Ronald, Buckland, Amanda, and Sheaves, Marcus (2014) Fish gut content analysis: robust measures of diet composition. Fish and Fisheries, 15 (1). pp. 170-177.

Frisch, Ashley J., Ireland, Matthew, and Baker, Ronald (2014) Trophic ecology of large predatory reef fishes: energy pathways, trophic level, and implications for fisheries in a changing climate. Marine Biology, 161 (1). pp. 61-73.

Baker, Ronald, Fujiwara, Masami, and Minello, Thomas J. (2014) Juvenile growth and mortality effects on white shrimp Litopenaeus setiferus population dynamics in the northern Gulf of Mexico. Fisheries Research, 155. pp. 74-82.

Davis, Ben, Baker, Ronald, and Sheaves, Marcus (2014) Seascape and metacommunity processes regulate fish assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 187-202.

Baker, Ronald, Fry, Brian, Rozas, Lawrence P., and Minello, Thomas J. (2013) Hydrodynamic regulation of salt marsh contributions to aquatic food webs. Marine Ecology Progress Series, 490. pp. 37-52.

Sheaves, Marcus, Johnston, Ross, Johnson, Ashlee, Baker, Ronald, and Connolly, Rod M. (2013) Nursery function drives temporal patterns in fish assemblage structure in four tropical estuaries. Estuaries and Coasts, 36 (5). pp. 893-905.

Davis, Benjamin, Johnston, Ross, Baker, Ronnie, and Sheaves, Marcus (2012) Fish utilisation of wetland nurseries with complex hydrological connectivity. PLoS ONE, 7 (11). e49107. pp. 1-11.

Minello, Thomas J., Rozas, Lawrence P., and Baker, Ronald (2012) Geographic variability in salt marsh flooding patterns may affect nursery value for fishery species. Estuaries and Coasts, 35 (2). pp. 501-514.

Sheaves, Marcus, Johnston, Ross, Connolly, Rod M., and Baker, Ronald (2012) Importance of estuarine mangroves to juvenile banana prawns. Estuarine, Coastal and Shelf Science , 114. pp. 208-219.

Baker, Ronald, and Minello, Thomas J. (2011) Trade-offs between gear selectivity and logistics when sampling nekton from shallow open water habitats: a gear comparison study. Gulf and Caribbean Research, 23. pp. 37-48.

Baker, Ronald, and Minello, Thomas J. (2010) Growth and mortality of juvenile white shrimp Litopenaeus setiferus in a marsh pond. Marine Ecology Progress Series, 413. pp. 95-104.

Baker, Ron, and Sheaves, Marcus (2009) Overlooked small and juvenile piscivores dominate shallow-water estuarine "refuges" in tropical Australia. Estuarine, Coastal and Shelf Science , 85 (4). pp. 618-626.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Frisch, A.J., Baker, R., Hobbs, J-P. A., and Nankervis, L. (2008) A quantitative comparison of recreational spearfishing and linefishing on the Great Barrier Reef: implications for management of multi-sector coral reef fisheries. Coral Reefs, 27 (1). pp. 85-95.

Baker, Ron, and Sheaves, Marcus (2007) Shallow-water refuge paradigm: conflicting evidence from tethering experiments in a tropical estuary. Marine Ecology Progress Series, 349. pp. 13-22.

Sheaves, Marcus, Brodie, Jon, Brooke, Brendan, Dale, Pat, Lovelock, Catherine, Waycott, Michelle, Gehrke, Peter, Johnston, Ross, and Baker, Ronald (2007) Vulnerability of coastal and estuarine habitats in the GBR to climate change. In: Johnson, Johanna E., and Marshall, Paul A., (eds.) Climate Change and the Great Barrier Reef: a vulnerability assessment. Great Barrier Reef Marine Park Authority and the Australian Greenhouse Office, Townsville, QLD, Australia, pp. 593-620.

Baker, Ronald, and Sheaves, Marcus (2006) Visual surveys reveal high densities of large piscivores in shallow estuarine nurseries. Marine Ecology Progress Series, 323. pp. 75-82.

Sheaves, Marcus, Baker, Ronnie, and Johnston, Ross (2006) Marine nurseries and effective juvenile habitats: an alternative view. Marine Ecology Progress Series , 318. pp. 303-306.

Baker, Ronald (2006) Piscivory and the functioning of shallow tropical estuarine nursery grounds. PhD thesis, James Cook University.

Baker, Ronald, and Sheaves, Marcus (2005) Redefining the piscivore assemblage of shallow estuarine nursery habitats. Marine Ecology Progress Series, 291. pp. 197-213.