Publications by: Molecular Sciences

Up a level
Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0 [feed] RSS 2.0
Group by: No Grouping | Creators | Item Type
Jump to: A | B | E | F | G | H | J | L | M | R | S | V | W
Number of items: 26.

A

Alharbi, Adel B., Schmitz, Ulf, Bailey, Charles G., and Rasko, John E.J. (2021) CTCF as a regulator of alternative splicing: new tricks for an old player. Nucleic Acids Research, 49 (14). pp. 7825-7838.

Aghajani, Marra Jai, Yang, Tao, Schmitz, Ulf, James, Alexander, McCafferty, Charles Eugenio, de Souza, Paul, Niles, Navin, and Roberts, Tara L. (2020) Epithelial-to-mesenchymal transition and its association with PD-L1 and CD8 in thyroid cancer. Endocrine Connections, 9. pp. 1028-1041.

Amirkhah, Raheleh, Naderi-Meshkin, Hojjat, Shah, Jaynish S., Dunne, Philip D., and Schmitz, Ulf (2019) The intricate interplay between epigenetic events, alternative splicing and noncoding RNA deregulation in colorectal cancer. Cells, 8 (8). 929.

Amirkhah, Raheleh, Meshkin, Hojjat Naderi, Farazmand, Ali, Rasko, John E.J., and Schmitz, Ulf (2017) Computational and experimental identification of tissue-specific MicroRNA targets. In: Dalmay, Tamas, (ed.) MicroRNA Detection and Target Identification: methods and protocols. Methods in Molecular Biology, 1580 . Humana Press Inc., New York, NY, USA, pp. 127-147.

Amirkhah, Raheleh, Schmitz, Ulf, Linnebacher, Michael, Wolkenhauer, Olaf, and Farazmand, Ali (2015) MicroRNA-mRNA interactions in colorectal cancer and their role in tumor progression. Genes, Chromosomes and Cancer, 54 (3). pp. 129-141.

Amirkhah, R., Farazmand, A., Irfan-Maqsood, M., Wolkenhauer, O., and Schmitz, U. (2015) The role of microRNAs in the resistance to colorectal cancer treatments. Cellular and Molecular Biology, 61 (6). pp. 17-23.

B

Blazev, Ronnie, Ashwood, Christopher, Abrahams, Jodie L., Chung, Long H., Francis, Deanne, Yang, Pengyi, Watt, Kevin I., Qian, Hongwei, Quaife-Ryan, Gregory A., Hudson, James E., Gregorevic, Paul, Thaysen-Andersen, Morten, and Parker, Benjamin L. (2021) Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development. Molecular and Cellular Proteomics, 20. 100030.

Bailey, Charles G., Gupta, Shailendra, Metierre, Cynthia, Amarasekera, Punkaja M.S., O'Young, Patrick, Kyaw, Wunna, Laletin, Tatyana, Francis, Habib, Semaan, Crystal, Sharifi Tabar, Mehdi, Singh, Krishna P., Mullighan, Charles G., Wolkenhauer, Olaf, Schmitz, Ulf, and Rasko, John (2021) Structure–function relationships explain CTCF zinc finger mutation phenotypes in cancer. Cellular and Molecular Life Sciences, 78. pp. 7519-7536.

E

Emran, Abdullah Al, Nsengimana, Jérémie, Punnia-Moorthy, Gaya, Schmitz, Ulf, Gallagher, Stuart J., Newton-Bishop, Julia, Tiffen, Jessamy C., and Hersey, Peter (2020) Study of the female sex survival advantage in melanoma—a focus on x-linked epigenetic regulators and immune responses in two cohorts. Cancers, 12. 2082.

Edwards, Christopher R., Ritchie, William, Wong, Justin J-L., Schmitz, Ulf, Middleton, Robert, An, Xiuli, Mohandas, Narla, Rasko, John E.J., and Blobel, Gerd A. (2016) A dynamic intron retention program in the mammalian megakaryocyte and erythrocyte lineages. Blood, 127 (17). e24-e34.

F

Francis, Deanne, Krycer, James R, Cooney, Gregory J, and James, David E (2019) A modified gas-trapping method for high-throughput metabolic experiments in Drosophila melanogaster. BioTechniques, 67. pp. 123-125.

G

Green, Immanuel D., Pinello, Natalia, Song, Renhua, Lee, Quitin, Halsted, James M., Kwok, Chau-To, Wong, Alex C. H., Nair, Shalima S., Clark, Susan J., Roediger, Ben, Schmitz, Ulf, Larance, Mark, Hayashi, Rippei, Rasko, John E. J., and Wong, Justin J.-L. (2020) Macrophage development and activation involve coordinated intron retention in key inflammatory regulators. Nucleic Acids Research, 48 (12). pp. 6513-6529.

H

Havula, E., Ghazanfar, S., Lamichane, N., Francis, D., Hasygar, K., Liu, Y., Alton, L.A., Johnstone, J., Needham, E.J., Pulpitel, T., Clark, T., Niranjan, H.N., Shang, V., Tong, V., Jiwnani, N., Audia, G., Alves, A.N., Sylow, L., Mirth, C., Neely, G.G., Yang, J., Hietakangas, V., Simpson, S.J., and Senior, A.M. (2022) Genetic variation of macronutrient tolerance in Drosophila melanogaster. Nature Communications, 13. 1637.

J

Jensen, Sacha A., Atwa, Ondine, and Handford, Penny A. (2021) Assembly assay identifies a critical region of human fibrillin-1 required for 10 - 12 nm diameter microfibril biogenesis. PLoS ONE, 16 (3). e0248532.

L

Lai, Xin, Eberhardt, Martin, Schmitz, Ulf, and Vera, Julio (2019) Systems biology-based investigation of cooperating microRNAs as monotherapy or adjuvant therapy in cancer. Nucleic Acids Research, 47 (15). pp. 7753-7766.

Lai, Xin, Gupta, Shailendra K., Schmitz, Ulf, Marquardt, Stephan, Knoll, Susanne, Spitschak, Alf, Wolkenhauer, Olaf, Pützer, Brigitte M., and Vera, Julio (2018) MiR-205-5p and miR-342-3p cooperate in the repression of the E2F1 transcription factor in the context of anticancer chemotherapy resistance. Theranostics, 8 (4). pp. 1106-1120.

M

Mason, Benjamin M., Koyanagi, Mitsumasa, Sugihara, Tomohiro, Iwasaki, Makoto, Slepak, Vladlen, Miller, David J., Sakai, Yusuke, and Terakita, Akihisa (2023) Multiple opsins in a reef-building coral, Acropora millepora. Scientific Reports, 13. 1628.

Monteuuis, Geoffray, Schmitz, Ulf, Petrova, Veronika, Kearney, Padraic S., and Rasko, John E.J. (2020) Holding on to junk bonds: intron retention in cancer and therapy. Cancer Research, 81 (4). pp. 779-789.

Mϋnch, G. (2005) Glycation and physiological mechanisms of its prevention in Alzheimer's disease. In: Sames, Klaus, Sethe, Sebastian, and Stolzing, Alexandra, (eds.) Extending the Lifespan: biotechnical, gerontological and social problems. LIT Verlag, Mϋnster, Germany, pp. 103-106.

R

Robertson, Ian B., Dias, Hans F., Osuch, Isabelle H., Lowe, Edward D., Jensen, Sacha A., Redfield, Christina, and Handford, Penny A. (2017) The N-terminal region of Fibrillin-1 mediates a bipartite interaction with LTBP1. Structure, 25 (8). 1208-1221.e5.

S

Schmitz, Ulf, Monteuuis, Geoffray, Petrova, Veronika, Shah, Jaynish S., and Rasko, John E.J. (2021) Computational methods for intron retention identification and quantification. In: Wolkenhauer, Olaf, Cai, Yudong, and Rozman, Damjana, (eds.) Systems Medicine: integrative, qualitative and computational approaches. Academic Press, London Wall, United Kingdom, pp. 63-74.

Shiel, Brett P., Hall, Nathan E., Cooke, Ira R., Robinson, Nicholas A., and Strugnell, Jan M. (2017) Epipodial tentacle gene expression and predetermined resilience to summer mortality in the commercially important greenlip abalone, Haliotis laevigata. Marine Biotechnology, 19 (2). pp. 191-205.

Schmitz, Ulf, Pinello, Natalia, Jia, Fangzhi, Alasmari, Sultan, Ritchie, William, Keightley, Maria-Cristina, Shini, Shaniko, Lieschke, Graham J., Wong, Justin J-L., and Rasko, John E.J. (2017) Intron retention enhances gene regulatory complexity in vertebrates. Genome Biology, 18. 216.

Schmitz, Ulf, and Wolkenhauer, Olaf (2016) Systems medicine. Methods in Molecular Biology, 1386 . Springer, New York, USA.

V

Vanichkina, Darya P., Schmitz, Ulf, Wong, Justin J.-L., and Rasko, John E.J. (2018) Challenges in defining the role of intron retention in normal biology and disease. Seminars in Cell and Developmental Biology, 75. pp. 40-49.

W

Wong, Justin J.-L., Au, Amy Y.M., Gao, Dada, Pinello, Natalia, Kwok, Chau-To, Thoeng, Annora, Lau, Katherine A., Gordon, Jane E.A., Schmitz, Ulf, Feng, Yue, Nguyen, Trung V., Middleton, Robert, Bailey, Charles G., Holst, Jeff, Rasko, John E.J., and Ritchie, William (2016) RBM3 regulates temperature sensitive miR-142-5p and miR-143 (thermomiRs), which target immune genes and control fever. Nucleic Acids Research, 44 (6). pp. 2888-2897.

This list was generated on Tue Aug 8 22:27:21 2023 AEST.