Kuo, Chao Yang, Tsai, Cheng-Han, Huang, Ya Yi, Heng, Wei Khang, Hsiao, An Tzi, Hsieh, Hernyi Justin, and Chen, Chaolun Allen (2022) Fine intervals are required when using point intercept transects to assess coral reef status. Frontiers in Marine Science, 9. 795512.

Tsai, Cheng-Han, Sweatman, Hugh P.A., Thibaut, Loïc M., and Connolly, Sean R. (2022) Volatility in coral cover erodes niche structure, but not diversity, in reef fish assemblages. Science Advances, 8 (24). eabm6858.

Tsai, Cheng-Han (2020) Variation in relative species abundance of reef fishes: drivers and ecosystem impacts. PhD thesis, James Cook University.

Nakazawa, Takefumi, Liu, Shang Yin Vanson, Sakai, Yoichiro, Araki, Kiwako S., Tsai, Cheng-Han, and Okuda, Noboru (2018) Spatial genetic structure and body size divergence in endangered Gymnogobius isaza in ancient Lake Biwa. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 29 (5). pp. 756-764.

Tsai, Cheng-Han, Hsieh, Chih Hao, and Nakazawa, Takefumi (2016) Predator–prey mass ratio revisited: does preference of relative prey body size depend on individual predator size? Functional Ecology, 30 (12). pp. 1979-1987.