Guinotte, J.M., Bartley, J.D., Iqbal, A., Fautin, D.G., and Buddemeier, R.W. (2006) Modeling habitat distribution from organism occurrences and environmental data: case study using anemonefishes and their sea anemone hosts. Marine Ecology Progress Series, 316. pp. 269-283.

Guinotte, John M., Orr, James, Cairns, Stephen, Freiwald, Andre, Morgan, Lance, and George, Robert (2006) Will human-induced changes in seawater chemistry alter the distribution of deep-sea scleractinian corals? Frontiers in Ecology and the Environment, 4 (3). pp. 141-146.

Guinotte, John Michael (2006) Understanding environmental controls and predicting climate change effects on the health and occurrence of coral communities and their constituent organisms. PhD thesis, James Cook University.