Luly, J., Buettner, P., Parsons, J., Thiriet, D., and Gyuris, Emma (2015) Tooth wear, body mass index and management options for edentulous black flying-foxes (Pteropus alecto Gould) in the Townsville district, north Queensland, Australia. Australian Veterinary Journal, 93 (3). pp. 84-88.

Speare, R., Luly, J., Reimers, J., Durrheim, D., and Lunt, R. (2013) Antibodies to Australian bat lyssavirus in an asymptomatic bat carer. Internal Medicine Journal, 43 (11). pp. 1256-1257.

Buttner, Petra G., Westcott, David A., Maclean, Jennefer, Brown, Lawrence, McKeown, Adam, Johnson, Ashleigh, Wilson, Karen, Blair, David, Luly, Jonathan, Skerratt, Lee, Muller, Reinhold, and Speare, Richard (2013) Tick paralysis in spectacled flying-foxes (Pteropus conspicillatus) in North Queensland, Australia: impact of a ground-dwelling ectoparasite finding an arboreal host. PLoS ONE, 8 (9). e73078. pp. 1-10.

Moravek, Silvie, Luly, Jon, Grindrod, John, and Fairfax, Russell (2013) The origin of grassy balds in the Bunya Mountains, southeastern Queensland, Australia. Holocene, 23 (2). pp. 305-315.

Bird, Michael I., Hutley, Lindsay B., Lawes, Michael J., Lloyd, Jon, Luly, Jon G., Ridd, Peter V., Roberts, Richard G., Ulm, Sean, and Wurster, Chris M. (2013) Humans, megafauna and environmental change in tropical Australia. Journal of Quaternary Science, 28 (5). pp. 439-452.

Fox, Samantha, Waycott, Michelle, Blair, David, and Luly, Jon (2012) Regional genetic differentiation in the spectacled flying fox (Pteropus conspicillatus Gould). In: Haberle, Simon G/, and David, Bruno, (eds.) Peopled Landscapes: archaeological and biogeographic approaches to landscapes. Terra Australia, 34 . ANU E Press, Canberra, ACT, Australia, pp. 459-472.

Mooney, S.D., Harrison, S.P., Bartlein, P.J., Daniau, A.-L., Stevenson, J., Brownlie, K.C., Buckman, S., Cupper, M., Luly, J., Black, M., Colhoun, E., D'Costa, D., Dodson, J., Haberle, S., Hope, G.S., Kershaw, P., Kenyon, C., McKenzie, M., and Williams, N. (2011) Late Quaternary fire regimes of Australasia. Quaternary Science Reviews, 30 (1-2). 28- 46.

Luly, J.G., Blair, David, Parsons, Jennifer G., Fox, Samantha, and VanDerWal, Jeremy (2010) Last Glacial Maximum habitat change and its effects on the grey-headed flying fox (Pteropus poliocephalus Temminck 1825). In: Haberle, Simon G., Stevenson, Janelle, and Prebble, Matthew, (eds.) Altered Ecologies: fire, climate and human influence on terrestrial landscapes. Terra Australis, 32 . ANU E Press, Canberra, ACT, Australia, pp. 83-100.

Parsons, Jennifer G., Blair, David, Luly, Jon, and Robson, Simon K.A. (2009) Bat strikes in the Australian aviation industry. Journal of Wildlife Management, 73 (4). pp. 526-529.

Parsons, Jennifer G., Blair, David, Luly, Jon, and Robson, Simon K.A. (2008) Flying-fox (Megachiroptera: Pteropodidae) flight altitudes determined via an unusual sampling method: aircraft strikes in Australia. Acta Chiropterologica, 10 (2). pp. 377-379.

Fox, Samantha, Luly, Jon, Mitchell, Catlin, Maclean, Jenny, and Westcott, David A. (2008) Demographic indications of decline in the spectacled flying fox (Pteropus conspicillatus) on the Atherton Tablelands of northern Queensland. Wildlife Research, 35 (5). pp. 417-424.

Luly, J.G., Grindrod, J.F., and Penny, D. (2006) Holocene palaeoenvironments and change at Three-Quarter Mile Lake, Silver Plains Station, Cape York Peninsula, Australia. The Holocene, 16 (8). pp. 1085-1094.

Witt, G. Bradd, Luly, Jon, and Fairfax, Russell J. (2006) How the west was once: vegetation change in south-west Queensland from 1930 to 1995. Journal of Biogeography, 33 (9). pp. 1585-1596.

Choat, Brendan, Ball, Marilyn C., Luly, Jon G., Donnelly, Christine F., and Holtum, Joseph A.M. (2006) Seasonal patterns of leaf gas exchange and water relations in dry rain forest trees of contrasting leaf phenology. Tree Physiology, 26 (5). pp. 657-664.

Choat, Brendan, Ball, Marilyn C., Luly, Jon G., and Holtum, Joseph A.M. (2005) Hydraulic architecture of deciduous and evergreen dry rainforest tree species from north-eastern Australia. Trees, 19 (3). pp. 305-311.

Boyd, B., and Luly, J. (2005) Inland spring mounds. In: Steiner, G.M., (ed.) Moore von Sibieien bis Feuerland. Stapfia (85). Oberösterreichisches Landesmuseum, Linz, Austria, pp. 415-417.

Luly, J.G., and Grindrod, J.F. (2005) Tropical peatlands of northern Australia. In: Steiner, G.M., (ed.) Moore von Sibieien bis Feuerland. Stapfia (85). Oberösterreichisches Landesmuseum, Linz, Austria, pp. 417-419.

Hesse, P.P., Luly, J.G., and Magee, J.W. (2005) The beating heart: environmental history of Australia's deserts. In: Smith, Mike, and Hesse, Paul, (eds.) 23 Degrees South: Archaeology and environmental history of the Southern Deserts. National Museum of Australia Press, Canberra, Australia, pp. 56-72.

Choat, Brendan, Ball, Marilyn, Luly, Jon, and Holtum, Joseph (2003) Pit membrane porosity and water stress-induced cavitation in four co-existing dry rainforest tree species. Plant Physiology, 131 (1). pp. 41-48.

Luly, J.G. (2001) On the equivocal fate of Late Pleistocene Callitris Vent. (Cupressaceae) woodlands in arid South Australia. Quaternary International, 83-85. pp. 155-168.

Luly, Jon (2001) Palynology of the perfumed pineries of arid South Australia. In: Dargavel, John, Hart, Diane, and Libbis, Brenda, (eds.) Perfumed Pineries: environmental history of Australia's Callitris forests. Centre for Resource and Enviromental Studies, The Australian National University, Canberrra, ACT, pp. 1-8.