Bridge, Tom C.L., Cowman, Peter F., Quattrini, Andrea M., Bonito, Victor E., Sinniger, Frederic, Harii, Saki, Head, Catherine E.I., Hung, Julia Y., Halafihi, Tuikolongahau, Rongo, Teina, and Baird, Andrew H. (2023) A tenuis relationship: traditional taxonomy obscures systematics and biogeography of the ‘Acropora tenuis’ (Scleractinia: Acroporidae) species complex. Zoological Journal of the Linnean Society. zlad062. (In Press)

Horowitz, Jeremy, Quattrini, Andrea M., Brugler, Mercer R., Miller, David J., Pahang, Kristina, Bridge, Tom C.L., and Cowman, Peter F. (2023) Bathymetric evolution of black corals through deep time. Proceedings of the Royal Society of London Series B, Biological Sciences, 290 (2008). 20231107.

Wright, Raven M., Beaman, Robin J., Daniell, James, Bridge, Tom C.L., Pall, Jodie, and Webster, Jody M. (2023) Benthic communities of the lower mesophotic zone on One Tree shelf edge, southern Great Barrier Reef, Australia. Marine and Freshwater Research, 74 (13). pp. 1178-1192.

Baird, Andrew, Prior, Susan, Bridge, Thomas, and Cowman, Peter (2023) First records of coral spawning on Norfolk Island. Galaxea, Journal of Coral Reef Studies, 25 (1). pp. 3-4.

Gress Hernandez, Erika, Bridge, Tom, Fyfe, Justin, and Galbraith, Gemma (2023) Novel Interaction between a Rabbitfish and Black Corals. Oceans, 4. pp. 236-241.

González-Murcia, Saúl, Ekins, Merrick, Bridge, Tom C.L., Battershill, Christopher N., and Jones, Geoffrey P. (2023) Substratum selection in coral reef sponges and their interactions with other benthic organisms. Coral Reefs, 42 (2). pp. 427-442.

Galbraith, Gemma F., Cresswell, Benjamin J., McCormick, Mark, Bridge, Thomas C., and Jones, Geoffrey P. (2022) Contrasting hydrodynamic regimes of submerged pinnacle and emergent coral reefs. PLoS ONE, 17 (8). e0273092.

Horowitz, Jeremy, Opresko, Dennis, Molodtsova, Tina N., Beaman, Robin J., Cowman, Peter F., and Bridge, Tom C.L. (2022) Five new species of black coral (Anthozoa; Antipatharia) from the Great Barrier Reef and Coral Sea, Australia. Zootaxa, 5213 (1). pp. 1-35.

Bridge, Tom C.L., Baird, Andrew H., Pandolfi, John M., McWilliam, Michael J., and Zapalski, Mikolaj K. (2022) Functional consequences of Palaeozoic reef collapse. Scientific Reports, 12 (1). 1386.

McWilliam, Mike, Madin, Joshua S., Chase, Tory J., Hoogenboom, Mia O., and Bridge, Tom C.L. (2022) Intraspecific variation reshapes coral assemblages under elevated temperature and acidity. Ecology Letters, 25 (11). pp. 2513-2524.

Ball, Eldon E., Hayward, David C., Bridge, Tom C.L., and Miller, David J. (2021) Acropora - The most-studied coral genus. In: Boutet, Agnès, and Schierwater, Bernd, (eds.) Handbook of Marine Model Organisms in Experimental Biology: Established and Emerging. CRC Press, Boca Raton, FL, USA, pp. 173-193.

Voolstra, Christian R., Quigley, Kate M., Davies, Sarah W., Parkinson, John Everett, Peixoto, Raquel, Aranda, Manuel, Baker, Andrew C., Barno, Adam R., Barshis, Daniel J., Benzoni, Francesca, Bonito, Victor, Bourne, David G., Buitrago-López, Carol, Bridge, Tom C.L., Chan, Cheong Xin, Combosch, David J., Craggs, Jamie, Frommlet, Jörg C., Herrera, Santiago, Quattrini, Andrea M., Röthig, Till, Reimer, James D., Rubio-Portillo, Esther, Suggett, David J., Villela, Helena, Ziegler, Maren, and Sweet, Michael (2021) Consensus guidelines for advancing coral holobiont genome and specimen voucher deposition. Frontiers in Marine Science, 8. 701784.

Galbraith, G.F., Cresswell, B., McCormick, M.I., Bridge, T.C., and Jones, G.P. (2021) High diversity, abundance and distinct fish assemblages on submerged coral reef pinnacles compared to shallow emergent reefs. Coral Reefs, 40. pp. 335-354.

Smallhorn-West, Patrick F., Gordon, Sophie E., Dempsey, Alexandra C., Purkis, Sam J., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Southgate, Paul C., Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2021) Tongan socio-environmental spatial layers for marine ecosystem management. Pacific Conservation Biology, 27 (1). pp. 86-92.

Bonito, Victor E., Baird, Andrew H., Bridge, Tom, Cowman, Peter F., and Fenner, Douglas (2021) Types, topotypes and vouchers are the key to progress in coral taxonomy: Comment on Wepfer et al. (2020). Molecular Phylogenetics and Evolution, 159. 107104.

Zapalski, Mikołaj K., Baird, Andrew H., Bridge, Tom, Jakubowicz, Michał, and Daniell, James (2021) Unusual shallow water Devonian coral community from Queensland and its recent analogues from the inshore Great Barrier Reef. Coral Reefs, 40. pp. 417-431.

Smallhorn-West, Patrick, Gordon, Sophie, Stone, Karen, Ceccarelli, Daniela, Malimali, Siola'a, Halafihi, Tu'ikolongahau, Wyatt, Mathew, Bridge, Tom, Pressey, Robert, and Jones, Geoffrey (2020) Biophysical and anthropogenic influences on the status of Tonga's coral reefs and reef fish fishery. PLoS One, 15 (11). e0241146.

Smallhorn-West, Patrick F., Stone, Karen, Ceccarelli, Daniela M., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13. e12755.

Smallhorn-West, Patrick, Garvin, J.B., Slayback, D.A., DeCarlo, T.M., Gordon, S.E., Fitzgerald, S.H., Halafihi, T., Jones, G.P., and Bridge, T.C.L. (2020) Coral reef annihilation, persistence and recovery at Earth's youngest volcanic island. Coral Reefs, 39. pp. 529-536.

Smallhorn-West, Patrick F., Sheehan, Jason, Malimali, Siola'a, Halafihi, Tuikolongahau, Bridge, Tom C.L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Incentivizing co-management for impact: mechanisms driving the successful national expansion of Tonga's Special Management Area program. Conservation Letters, 13 (6). e12742.

Bridge, Tom C.L., Luiz, Osmar J., Kuo, Chao-Yang, Precoda, Kristin, Madin, Elizabeth M.P., Madin, Joshua S., and Baird, Andrew H. (2020) Incongruence between life-history traits and conservation status in reef corals. Coral Reefs, 39. pp. 271-279.

Horowitz, Jeremy, Brugler, Mercer R., Bridge, Tom C.L., and Cowman, Peter F. (2020) Morphological and molecular description of a new genus and species of black coral (Cnidaria: Anthozoa: Hexacorallia: Antipatharia: Antipathidae: Blastopathes) from Papua New Guinea. Zootaxa, 4821 (3). pp. 553-569.

Bridge, Tom C. L., Huang, Zhi, Przeslawski, Rachel, Tran, Maggie, Siwabessy, Justy, Picard, Kim, Reside, April E., Logan, Murray, Nichol, Scott L., and Caley, M. Julian (2020) Transferable, predictive models of benthic communities informs marine spatial planning in a remote and data-poor region. Conservation Science and Practice, 2 (9). e251.

Cowman, Peter F., Quattrini, Andrea M., Bridge, Tom C.L., Watkins-Colwell, Gregory J., Fadli, Nur, Grinblat, Mila, Roberts, T. Edward, McFadden, Catherine S., Miller, David J., and Baird, Andrew H. (2020) An enhanced target-enrichment bait set for Hexacorallia provides phylogenomic resolution of the staghorn corals (Acroporidae) and close relatives. Molecular Phylogenetics and Evolution, 153. 106944.

MacDonald, Chancey, Bridge, Tom C.L., McMahon, Kelton W., and Jones, Geoffrey P. (2019) Alternative functional strategies and altered carbon pathways facilitate broad depth ranges in coral-obligate reef fishes. Functional Ecology, 33 (10). pp. 1962-1972.

Pratchett, Morgan, Bridge, Thomas, Brodie, Jon, Cameron, Darren, Day, Jonathan, Emslie, Mike, Grech, Alana, Hamann, Mark, Heron, Scott, Hoey, Andrew, Hoogenboom, Mia, Lough, Janice, Morrison, Tiffany, Osborne, Kate, Read, Mark, Schauble, Chloe, Smithers, Scott, Sweatman, Hugh, and Waterhouse, Jane (2019) Australia's Great Barrier Reef. In: Sheppard, Charles, (ed.) World Seas: an environmental evaluation. Elsevier, London, UK, pp. 333-362.

Sih, Tiffany L., Daniell, James J., Bridge, Thomas C. L., Beaman, Robin J., Cappo, Mike, and Kingsford, Michael J. (2019) Deep-reef fish communities of the Great Barrier Reef shelf-break: trophic structure and habitat associations. Diversity, 11. 26.

Lesser, Michael P., Slattery, Marc, Laverick, Jack H., Macartney, Keir J., and Bridge, Tom C. (2019) Global community breaks at 60m on mesophotic coral reefs. Global Ecology and Biogeography, 28 (10). pp. 1403-1416.

Bridge, Tom C.L., Beaman, Robin J., Bongaerts, Pim, Muir, Paul R., Ekins, Merrick, and Sih, Tiffany (2019) The Great Barrier Reef and Coral Sea. In: Loya, Yossi, Puglise, Kimberly A., and Bridge, Tom C.L., (eds.) Mesophotic Coral Ecosystems. Coral Reefs of the World, 12 . Springer, Cham, Switzerland, pp. 351-367.

Loya, Yossi, Puglise, Kimberely A., and Bridge, Tom C.L. (2019) Mesophotic Coral Ecosystems. Coral Reefs of the World, 12 . Springer, Cham, Switzerland.

Zawada, Kyle J.A., Madin, Joshua S., Baird, Andrew H., Bridge, Tom C.L., and Dornelas, Maria (2019) Morphological traits can track coral reef responses to the Anthropocene. Functional Ecology, 33 (6). pp. 962-975.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Malimali, Siola'a, Pressey, Robert L., and Jones, Geoffrey P. (2019) Predicting impact to assess the efficacy of community-based marine reserve design. Conservation Letters, 12 (1). e12602.

Roberts, T. Edward, Bridge, Tom C.L., Caley, M. Julian, Madin, Joshua S., and Baird, Andrew H. (2019) Resolving the depth zonation paradox in reef-building corals. Ecology, 100 (8). e02761.

Crosbie, Augustine J., Bridge, Tom C. L., Jones, Geoff, and Baird, Andrew H. (2019) Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology - Progress Series, 622. pp. 93-102.

Darling, Emily S., McClanahan, Tim R., Maina, Joseph, Gurney, Georgina G., Graham, Nicholas A.J., Januchowski-hartley, Fraser, Cinner, Joshua E., Mora, Camillo, Hicks, Christina C., Maire, Eva, Puotinen, Marji, Skirving, William J., Adjeroud, Mehdi, Ahmadia, Gabby, Arthur, Rohan, Bauman, Andrew G., Beger, Maria, Berumen, Michael L., Bigot, Lionel, Bouwmeester, Jessica, Brenier, Ambroise, Bridge, Thomas, Brown, Eric, Campbell, Stuart J., Cannon, Sara, Cauvin, Bruce, Chen, Chaolu Allen, Claudet, Joachim, Denis, Vianney, Donner, Simon, Estradivari, , Fadli, Nur, Feary, David A., Fenner, Douglas, Fox, Helen, Franklin, Erik C., Friedlander, Alan, Gilmour, James, Goiran, Claire, Guest, James, Hobbs, Jean-Paul A., Hoey, Andrew S., Houk, Peter, Johnson, Steve, Jupiter, Stacy D., Kayal, Mohsen, Kuo, Chao-Yang, Lamb, Joleah, Lee, Michelle A.C., Low, Jeffrey, Muthiga, Nyawira, Muttaqin, Efin, Nand, Yashika, Nash, Kirsty L., Nedlic, Osamu, Pandolfi, John M., Pardede, Shinta, Patankar, Vardhan, Penin, Lucie, Ribas-Deulofeu, Lauriane, Richards, Zoe, Roberts, T. Edward, Rodgers, Ku’ulei S., Safuan, Che Din Mohd, Sala, Enric, Shedrawi, George, Sin, Tsai Min, Smallhorn-West, Patrick, Smith, Jennifer E., Sommer, Brigitte, Steinberg, Peter, Sutthacheep, Makamas, Tan, Chun Hong James, Williams, Gareth J., Wilson, Shaun, Yeemin, Thamasak, Bruno, John F., Fortin, Marie-Josée, Krkosek, Martin, and Mouillot, David (2019) Social–environmental drivers inform strategic management of coral reefs in the Anthropocene. Nature Ecology & Evolution, 3. pp. 1341-1350.

Dumalagan, Edwin E., Cabaitan, Patrick C., Bridge, Tom C.L., Go, Kevin Thomas, Quimpo, Timothy Joseph R., Olavides, Ronald Dionnie D., Munar, Jeffrey C., Villanoy, Cesar L., and Siringan, Fernando P. (2019) Spatial variability in benthic assemblage composition in shallow and upper mesophotic coral ecosystems in the Philippines. Marine Environmental Research, 150. 104772.

Roberts, T. Edward, Keith, Sally A., Rahbek, Carsten, Bridge, Tom C.L., Caley, M. Julian, and Baird, Andrew H. (2019) Testing biodiversity theory using species richness of reef-building corals across a depth gradient. Biology Letters, 15 (10).

Cooper, Amanda M., MacDonald, Chancey, Roberts, T. Edward, and Bridge, Tom C.L. (2019) Variability in the functional composition of coral reef fish communities on submerged and emergent reefs in the central Great Barrier Reef, Australia. PLoS ONE, 14 (5). e0216785.

Horowitz, Jeremy, Opresko, Dennis M., and Bridge, Tom C.L. (2018) Black corals (Anthozoa: Antipatharia) from the deep (916 m-2542 m) Coral Sea, north-eastern Australia. Zootaxa, 4472 (2). pp. 307-326.

Alvarez Noriega, Mariana, Baird, Andrew H., Bridge, Tom C.L., Dornelas, Maria, Fontoura, Luisa, Pizarro, Oscar, Precoda, Kristin, Torres-Pulliza, Damaris, Woods, Rachael M., Zawada, Kyle, and Madin, Joshua S. (2018) Contrasting patterns of changes in abundance following a bleaching event between juvenile and adult scleractinian corals. Coral Reefs, 37 (2). pp. 527-532.

Bongiorno, Daniel L., Bryson, Mitch, Bridge, Tom C.L., Dansereau, Donald G., and Williams, Stefan B. (2018) Coregistered hyperspectral and stereo image seafloor mapping from an autonomous underwater vehicle. Journal of Field Robotics, 35 (3). pp. 312-329.

Madin, Joshua S., Baird, Andrew H., Bridge, Tom C.L., Connolly, Sean R., Zawada, Kyle J.A., and Dornelas, Maria (2018) Cumulative effects of cyclones and bleaching on coral cover and species richness at Lizard Island. Marine Ecology Progress Series, 604. pp. 263-268.

MacDonald, Chancey, Jones, Geoffrey P., and Bridge, Tom (2018) Marginal sinks or potential refuges? Costs and benefits for coral-obligate reef fishes at deep range margins. Proceedings of the Royal Society of London Series B, Biological Sciences, 285 (1890). 20181545.

Hughes, Terry P., Anderson, Kristen D., Connolly, Sean R., Heron, Scott F., Kerry, James T., Lough, Janice M., Baird, Andrew H., Baum, Julia, Berumen, Michael L., Bridge, Tom C., Claar, Danielle C., Eakin, C. Mark, Gilmour, James P., Graham, Nicholas A.J., Harrison, Hugo, Hobbs, Jean-Paul A., Hoey, Andrew S., Hoogenboom, Mia, Lowe, Ryan J., McCulloch, Malcolm T., Pandolfi, John M., Pratchett, Morgan, Schoepf, Verena, Torda, Gergely, and Wilson, Shaun K. (2018) Spatial and temporal patterns of mass bleaching of corals in the Anthropocene. Science, 359 (6371). pp. 80-83.

Laverick, Jack H., Piango, Shanice, Andradi-Brown, Dominic A., Exton, Dan A., Bongaerts, Pim, Bridge, Tom C.L., Lesser, Michael P., Pyle, Richard L., Slattery, Marc, Wagner, Daniel, and Rogers, Alex D. (2018) To what extent do mesophotic coral ecosystems and shallow reefs share species of conservation interest? A systematic review. Environmental Evidence, 7 (15).

Quattrini, Andrea M., Faircloth, Brant C., Dueñas, Luisa F., Bridge, Tom C.L., Brugler, Mercer R., Calixto-Botía, Iván F., DeLeo, Danielle M., Forêt, Sylvain, Herrera, Santiago, Lee, Simon M.Y., Miller, David J., Prada, Carlos, Rádis-Baptista, Gandhi, Ramírez-Portilla, Catalina, Sánchez, Juan A., Rodríguez, Estefanía, and McFadden, Catherine S. (2018) Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: new approaches to long-standing problems. Molecular Ecology Resources, 18 (2). pp. 281-295.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Depth distribution and abundance of a coral-associated reef fish: roles of recruitment and post-recruitment processes. Coral Reefs, 36 (1). pp. 157-166.

Hughes, Terry P., Kerry, James T., Álvarez-Noriega, Mariana, Alvarez-Romero, Jorge G., Anderson, Kristen D., Baird, Andrew, Babcock, Russell C., Beger, Maria, Bellwood, David, Berkelmans, Ray, Bridge, Tom C., Butler, Ian R., Byrne, Maria, Cantin, Neal E., Comeau, Steeve, Connolly, Sean, Cumming, Graeme S., Dalton, Steven J., Diaz-Pulido, Guillermo, Eakin, C. Mark, Figueira, Will F., Gilmour, James P., Harrison, Hugo B., Heron, Scott F., Hoey, Andrew S., Hobbs, Jean-Paul A., Hoogenboom, Mia O., Kennedy, Emma V., Kuo, Chao-Yang, Lough, Janice M., Lowe, Ryan J., Liu, Gang, McCulloch, Malcolm T., Malcolm, Hamish A., McWilliam, Michael J., Pandolfi, John M., Pears, Rachel J., Pratchett, Morgan S., Schoepf, Verena, Simpson, Tristan, Skirving, William J., Sommer, Brigitte, Torda, Gergely, Wachenfeld, David R., Willis, Bette L., and Wilson, Shaun (2017) Global warming and recurrent mass bleaching of corals. Nature, 543 (7645). pp. 373-377.

Smallhorn-West, Patrick F., Bridge, Tom C.L., Munday, Philip L., and Jones, Geoffrey P. (2017) Habitat morphology contrains the depth distribution and growth rate of a coral-associated reef fish. Marine Ecology Progress Series, 576. pp. 43-53.

Beaman, Robin J., Bridge, Tom C.L., Lüter, Carsten, Reitner, Joachim, and Wörheide, Gert (2016) Spatial patterns in the distribution of benthic assemblages across a large depth gradient in the Coral Sea, Australia. Marine Biodiversity, 46 (4). pp. 795-808.

Reside, April E., Bridge, Thomas C.L., and Rummer, Jodie L. (2016) Great Barrier Reef: clearing the way for reef destruction. Nature, 537. p. 307.

Bridge, Tom C.L., Luiz, Osmar J., Coleman, Richard R., Kane, Corinne N., and Kosaki, Randall K. (2016) Ecological and morphological traits predict depth-generalist fishes on coral reefs. Proceedings of the Royal Society of London Series B, Biological Sciences, 283 (1823). pp. 1-9.

MacDonald, Chancey, Bridge, Tom C.L., and Jones, Geoffrey P. (2016) Depth, bay position and habitat structure as determinants of coral reef fish distributions: are deep reefs a potential refuge? Marine Ecology - Progress Series, 561. pp. 217-231.

Bridge, Tom C.L., Grech, Alana M., and Pressey, Robert L. (2016) Factors influencing incidental representation of previously unknown conservation features in marine protected areas. Conservation Biology, 30 (1). pp. 154-165.

Ferrari, Renata, Bryson, Mitch, Bridge, Tom, Hustache, Julie, Williams, Stefan B., Byrne, Maria, and Figueira, Will (2016) Quantifying the response of structural complexity and community composition to environmental change in marine communities. Global Change Biology, 22 (5). pp. 1965-1975.

Laverick, Jack H., Andradi-Brown, Dominic A., Exton, Dan A., Bongaerts, Pim, Bridge, Tom C.L., Lesser, Michael P., Pyle, Richard L., Slattery, Marc, Wagner, Daniel, and Rogers, Alex D. (2016) To what extent do mesophotic coral ecosystems and shallow reefs share species of conservation interest? Environmental Evidence, 5 (16). pp. 1-8.

Scheffers, Brett R., De Meester, Luc, Bridge, Tom C.L., Hoffmann, Ary A., Pandolfi, John M., Corlett, Richard T., Butchart, Stuart H.M., Pearce-Kelly, Paul, Kovacs, Kit M., Dudgeon, David, Pacifici, Michela, Rondinini, Carlo, Foden, Wendy B., Martin, Tara G., Mora, Camilo, Bickford, David, and Watson, James E.M. (2016) The broad footprint of climate change from genes to biomes to people. Science, 354 (6313). aaf7671-2. pp. 1-13.

Madin, Joshua S., Anderson, Kristen D., Andreasen, Magnus Heide, Bridge, Tom C.L., Cairns, Stephen d., Connolly, Sean R., Darling, Emily S., Diaz, Marcela, Falster, Daniel S., Franklin, Erik C., Gates, Ruth, Hoogenboom, Mia O., Huang, Danwei, Keith, Sally A., Kosnik, Matthew A., Kuo, Chao-Yang, Lough, Janice M., Lovelock, Catherine E., Luiz, Osmar, Martinelli, Julieta, Mizerek, Toni, Pandolfi, John M., Pochon, Xavier, Pratchett, Morgan S., Putnam, Hollie M., Roberts, T. Edward, Stat, Michael, Wallace, Carden C., Widman, Elizabeth, and Baird, Andrew H. (2016) The coral trait database: a curated database of trait information for coral species from the global oceans. Scientific Data, 3. 160017. pp. 1-21.

Roberts, T. Edward, Bridge, Thomas C., Caley, M. Julian, and Baird, Andrew H. (2016) The point count transect method for estimates of biodiversity on coral reefs: improving the sampling of rare species. PLoS One, 11 (3). e0152335. pp. 1-10.

Przeslawski, Rachel, Alvarez, Belinda, Kool, Johnathan, Bridge, Tom, Caley, M. Julian, and Nichol, Scott (2015) Implications of sponge biodiversity patterns for the management of a marine reserve in Northern Australia. PLoS ONE, 10. e014181. pp. 1-20.

Thomas, Christopher J., Bridge, Thomas C.L., Figueiredo, Joana, Deleersnijder, Eric, and Hanert, Emmanuel (2015) Connectivity between submerged and near-sea-surface coral reefs: can submerged reef populations act as refuges? Diversity and Distributions, 21 (10). pp. 1254-1266.

Muir, Paul, Wallace, Carden, Bridge, Tom C.L., and Bongaerts, Pim (2015) Diverse staghorn coral fauna on the mesophotic reefs of North-East Australia. PLoS ONE, 10 (2). e0117933. pp. 1-17.

Roberts, T.E., Moloney, J.M., Sweatman, H.P.A., and Bridge, T.C.L. (2015) Benthic community composition on submerged reefs in the central Great Barrier Reef. Coral Reefs, 34 (2). pp. 569-580.

Ainsworth, Tracy D., Krause, Lutz, Bridge, Thomas, Torda, Gergely, Raina, Jean-Baptiste, Zakrzewski, Martha, Gates, Ruth D., Padilla-Gamino, Jacqueline L., Spalding, Heather L., Smith, Celia, Woolsey, Erika S., Bourne, David G., Bongaerts, Pim, Hoegh-Guldberg, Ove, and Leggat, Bill (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 9. pp. 2261-2274.

Bridge, Thomas C.L., Ferrari, Renata, Bryson, Mitch, Hovey, Renae, Figueira, Will F., Williams, Stefan B., Pizarro, Oscar, Harborne, Alastair R., and Byrne, Maria (2014) Variable responses of benthic communities to anomalously warm sea temperatures on a high-latitude coral reef. PLoS ONE, 9 (11). e113079. pp. 1-20.

Pontasch, S., Scott, A., Hill, R., Bridge, T., Fisher, P.L., and Davy, S.K. (2014) Symbiodinium diversity in the sea anemone Entacmaea quadricolor on the east Australian coast. Coral Reefs, 33 (2). pp. 537-542.

Bongaerts, P., Muir, P., Englebert, N., Bridge, T.C.L., and Hoegh-Guldberg, O. (2013) Cyclone damage at mesophotic depths on Myrmidon Reef (GBR). Coral Reefs, 32 (4). p. 935.

Bridge, Tom C.L., Hoey, Andrew S., Campbell, Stuart J., Muttaquin, Efin, Rudi, Edi, Fadli, Nur, and Baird, Andrew H. (2013) Depth-dependent mortality of reef corals following a severe bleaching event: implications for thermal refuges and population recovery. F1000Research, 2. 187. pp. 1-12.

Bridge, Tom C.L., Hughes, Terry P., Guinotte, John M., and Bongaerts, Pim (2013) Call to protect all coral reefs. Nature Climate Change, 3. pp. 528-530.

Harris, Peter T., Bridge, Thomas C.L., Beaman, Robin J., Webster, Jody M., Nichol, Scott L., and Brooke, Brendan P. (2013) Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat. ICES Journal of Marine Science, 70 (2). pp. 284-293.

Woolsey, E., Byrne, M., Webster, J.M., Williams, S., Pizarro, O., Thornborough, K., Davies, P., Beaman, Robin, and Bridge, Thomas (2013) Ophiopsila pantherina beds on subaqueous dunes off the Great Barrier Reef. In: Johnson, Criag, (ed.) Echinoderms in a Changing World. Taylor & Francis, London, pp. 175-179.

Bridge, T.C.L., Fabricius, K.E., Bongaerts, P., Wallace, C.C., Muir, P.R., Done, T.J., and Webster, J.M. (2012) Diversity of Scleractinia and Octocorallia in the mesophotic zone of the Great Barrier Reef, Australia. Coral Reefs, 31 (1). pp. 179-189.

Foster, Ralph, Bridge, Thomas, and Bongaerts, Pim (2012) The first record of Hippocampus denise (Syngnathidae) from Australia. Aqua: International Journal of Ichthyology, 18 (1). pp. 55-57.

Bridge, T., Scott, A., and Steinberg, D. (2012) Abundance and diversity of anemonefishes and their host sea anemones at two mesophotic sites on the Great Barrier Reef, Australia. Coral Reefs, 31 (4). pp. 1057-1062.

Beaman, Robin J., Bridge, Thomas, Done, Terry, Webster, Jody M., Williams, Stefan, and Pizarro, Oscar (2012) Habitats and benthos at Hydrographers Passage, Great Barrier Reef, Australia. In: Harris, Peter T., and Baker, Elaine K., (eds.) Seafloor Geomorphology as Benthic Habitat: GeoHab atlas of seafloor geomorphic features and benthic habitats. Elsevier, London, England, pp. 425-434.

Bridge, Thomas, and Guinotte, John (2012) Mesophotic Coral Reef Ecosystems in the Great Barrier Reef World Heritage Area: their potential distribution and possible role as refugia from disturbance. Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Bridge, Thomas, Beaman, Robin, Done, Terry, and Webster, Jody (2012) Predicting the location and spatial extent of submerged coral reef habitat in the Great Barrier Reef world heritage area, Australia. PLoS ONE, 7 (10). pp. 1-11.

Bongaerts, Pim, Sampayo, Eugenia M., Bridge, Thomas C.L., Ridgway, Tyrone, Vermeulen, Francisca, Englebert, Norbert, Webster, Jody M., and Hoegh-Guldberg, Ove (2011) Symbiodinium diversity in mesophotic coral communities on the Great Barrier Reef: a first assessment. Marine Ecology Progress Series, 439. pp. 117-126.

Bridge, T.C.L., Done, T.J., Beaman, R.J., Friedman, A., Williams, S.B., Pizarro, O., and Webster, J.M. (2011) Topography, substratum and benthic macrofaunal relationships on a tropical mesophotic shelf margin, central Great Barrier Reef, Australia. Coral Reefs, 30 (1). pp. 143-153.

Bongaerts, P., Bridge, T.C.L., Kline, D.I., Muir, P.R., Wallace, C.C., Beaman, R.J., and Hoegh-Guldberg, O. (2011) Mesophotic coral ecosystems on the walls of Coral Sea atolls. Coral Reefs, 30 (2). p. 335.

Bridge, Thomas C.L., Done, Terrence J., Friedman, Ariell, Beaman, Robin J., Williams, Stefan B., Pizzaro, Oscar, and Webster, Jody M. (2011) Variability in mesophotic coral reef communities along the Great Barrier Reef, Australia. Marine Ecology Progress Series, 428. pp. 63-75.

Bridge, Tom (2011) Habitats and sessile benthic megafaunal communities in the mesophotic zone of the Great Barrier Reef World Heritage Area, Australia. PhD thesis, James Cook University.

Williams, Stefan B., Pizarro, Oscar, Webster, Jody M. , Beaman, Robin J., Mahon, Ian, Johnson-Roberson, Matthew, and Bridge, Tom C.L. (2010) Autonomous underwater vehicle–assisted surveying of drowned reefs on the shelf edge of the Great Barrier Reef, Australia. Journal of Field Robotics, 27 (5). pp. 675-697.

Williams, Stefan B., Pizarro, Oscar, Johnson-Roberson, Matthew, Mahon, Ian, Webster, Jody, Beaman, Robin, and Bridge, Tom (2009) AUV-assisted surveying of relic reef sites. In: Proceedings of the Oceans 2008 MTS/IEEE Conference. pp. 1-7. From: Oceans 2008 MTS/IEEE Conference, 15-18 September 2008, Quebec City, Canada.

Webster, Jody M., Beaman, Robin J., Bridge, Thomas, Davies, Peter, Byrne, Maria, Williams, Stefan, Manning, Phil, Pizarro, Oscar, Thornborough, Kate, Woolsey, Erika, Thomas, Alex, and Tudhope, Sandy (2008) From corals to canyons: the Great Barrier Reef margin. EOS, 89 (24). pp. 217-218.