Wirth, Wytamma, Schwarzkopf, Lin, Schaffer, Jason, and Ariel, Ellen (2024) No Ranaviral DNA Found in Australian Freshwater Turtles, 2014–19, Despite Previous Serologic Evidence. Journal of Wildlife Diseases, 60 (3). pp. 683-690.

Moy, Karl, Schaffer, Jason, Hammer, Michael P., Attard, Catherine R.M., Beheregaray, Luciano, Duncan, Richard, Lintermans, Mark, Brown, Culum, and Unmack, Peter (2023) Alternative conservation outcomes from aquatic fauna translocations: Losing and saving the Running River rainbowfish. Aquatic Conservation: marine and freshwater ecosystems, 33 (12). pp. 1445-1459.

Villacorta Rath, Cecilia, Espinoza, Thomas, Cockayne, Bernie, Schaffer, Jason, and Burrows, Damien (2022) Environmental DNA analysis confirms extant populations of the cryptic Irwin’s turtle within its historical range. BMC Ecology and Evolution, 22. 57.

Waltham, Nathan J., Schaffer, Jason, Walker, Sophie, Perry, Justin, and Nordberg, Eric (2022) Simple fence modification increases land movement prospects for freshwater turtles on floodplains. Wildlife Biology, 2022 (3). e01012.

Ebner, Brendan C., Donaldson, James A., Murphy, Helen, Thuesen, Paul, Ford, Andrew, Schaffer, Jason, and Keith, Philippe (2021) Waterfalls mediate the longitudinal distribution of diadromous predatory fishes structuring communities in tropical, short, steep coastal streams. Freshwater Biology, 66 (6). pp. 1225-1241.

Waltham, Nathan, and Schaffer, Jason (2021) Will fencing floodplain and riverine wetlands from feral pig damage conserve fish community values? Ecology and Evolution, 11 (20). pp. 13780-13792.

Ebner, B.C., Millington, M., Holmes, B.J., Wilson, D.T., Sydes, T., Bickel, T.O., Power, T., Hammer, M., Lach, L., Schaffer, J., Lymbery,, A., and Morgan, D. (2020) Scoping the biosecurity risks and appropriate management relating to the freshwater ornamental aquarium trade across northern Australia. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Rhodin, Anders G.J., Stanford, Craig B., van Dijk, Peter Paul, Eisemberg, Carla, Luiselli, Luca, Mittermeier, Russell A., Hudson, Rick, Horne, Brian D., Goode, Eric V., Kuchling, Gerald, Walde, Andrew, Baard, Ernst H.W., Berry, Kristin H., Bertolero, Albert, Blanck, Torsten E.G, Bour, Roger, Buhlmann, Kurt A., Cayot, Linda J., Collett, Sydney, Currylow, Andrea, Das, Indraneil, Diagne, Tomas, Ennen, Joshua R., Forero-Medina, Germán, Frankel, Matthew G., Fritz, Uwe, Garcia, Gerardo, Gibbons, J. Whitfield, Gibbons, Paul M., Shiping, Gong, Guntoro, Joko, Hofmeyr, Margaretha D., Iverson, John B., Kiester, A. Ross, Lau, Michael, Lawson, Dwight P., Lovich, Jeffrey E., Moll, Edward O., Páez, Vivian P., Palomo-Ramos, Rosalinda, Platt, Kalyar, Platt, Steven G., Pritchard, Peter C.H., Quinn, Hugh R., Rahman, Shahriar Caesar, Randrianjafizanaka, Soary Tahafe, Schaffer, Jason, Selman, Will, Shaffer, H. Bradley, Sharma, Dionysius S.K., Haitao, Shi, Singh, Shailendra, Spencer, Ricky, Stannard, Kahleana, Sutcliffe, Sarah, Thomson, Scott, and Vogt, Richard C. (2018) Global conservation status of turtles and tortoises (order Testudines). Chelonian Conservation and Biology, 17 (2). pp. 135-161.

Waltham, Nathan J., and Schaffer, Jason R. (2018) Thermal and asphyxia exposure risk to freshwater fish in feral-pig-damaged tropical wetlands. Journal of Fish Biology, 93 (4). pp. 723-728.

Waltham, N.J., Schaffer, J., Buist, J., Geyle, M., and Toby, D. (2018) Working with land and sea rangers to tackle tropical wetland restoration and conservation on the north-western islands, Torres Straits, Australia. Wetlands Ecology and Management, 26 (6). pp. 1143-1156.

Ebner, Brendan C., Fulton, Christopher J., Donaldson, James A., and Schaffer, Jason (2016) Distinct habitat selection by freshwater morays in tropical rainforest streams. Ecology of Freshwater Fish, 25 (2). pp. 329-335.

Schaffer, Jason R., Hamann, Mark, Rowe, Richard, and Burrows, Damien W. (2016) Muddy waters: the influence of high suspended-sediment concentration on the diving behaviour of a bimodally respiring freshwater turtle from north-eastern Australia. Marine and Freshwater Research, 67 (4).

Ebner, Brendan C., Fulton, Christopher J., Cousins, Stephen, Donaldson, James A., Kennard, Mark J., Meynecke, Jan-Olaf, and Schaffer, Jason (2015) Filming and snorkelling as visual techniques to survey fauna in difficult to access tropical rainforest streams. Marine and Freshwater Research, 66 (2). pp. 120-126.

Doupe, Robert G., Knott, Matthew J., Schaffer, Jason, Burrows, Damien W., and Lymbery, Alan J. (2010) Experimental herbivory of native Australian macrophytes by the introduced Mozambique tilapia Oreochromis mossambicus. Austral Ecology, 35 (1). pp. 24-30.

Doupé, Robert G., Schaffer, Jason, Knott, Matthew J., and Burrows, Damien W. (2009) How might an exotic fish disrupt spawning success in a sympatric native species? Marine and Freshwater Research, 60 (5). pp. 379-383.

Doupé, R.G., Knott, M.J., Schaffer, J., and Burrows, D.W. (2009) Investigational piscivory of some juvenile Australian freshwater fishes by the introduced Mozambique tilapia Oreochromis mossambicus. Journal of Fish Biology, 74 (10). pp. 2386-2400.

Schaffer, Jason, Doupe, Robert G., and Lawler, Ivan R. (2009) What for the future of the Jardine River Painted Turtle? Pacific Conservation Biology, 15 (2). pp. 92-95.

Doupe, Robert G., Schaffer, Jason, Knott, Matthew J., and Dicky, Paul W. (2009) A description of freshwater turtle habitat destruction by feral pigs in tropical north eastern Australia. Herpetological Conservation and Biology, 4 (3). pp. 331-339.

Doupè, Robert G., Schaffer, Jason, and Knott, Matthew J. (2008) An Example of Freshwater Turtle Habitat Destruction by Foraging Feral Pigs in Tropical North-Eastern Australia. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.