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Cheal, Alistair J., Emslie, Michael J., Currey-Randall, Leanne M., and Heupel, Michelle R. (2021) Comparability and complementarity of reef fish measures from underwater visual census (UVC) and baited remote underwater video stations (BRUVS). Journal of Environmental Management, 289. 112375.

MacNeil, M. Aaron, Mellin, Camille, Pratchett, Morgan S., Hoey, Jessica, Anthony, Kenneth R.N., Cheal, Alistair J., Miller, Ian, Sweatman, Hugh, Cowan, Zara L., Taylor, Sascha, Moon, Steven, and Fonnesbeck, Chris J. (2016) Joint estimation of crown of thorns (Acanthaster planci) densities on the Great Barrier Reef. PeerJ, 4. e2310. pp. 1-17.

Emslie, Michael J., Logan, Murray, Williamson, David H., Ayling, Anthony M., MacNeil, M. Aaron, Ceccarelli, Daniela, Cheal, Alistair J., Evans, Richard D., Johns, Kerryn A, Jonker, Michelle J., Miller, Ian R., Osborne, Kate, Russ, Garry R., and Sweatman, Hugh P.A. (2015) Expectations and outcomes of reserve network performance following re-zoning of the Great Barrier Reef Marine Park. Current Biology, 25 (8). pp. 983-992.

Munday, Philip L., Cheal, Alistair J., Dixson, Danielle L., Rummer, Jodie L., and Fabricius, Katharina E. (2014) Behavioural impairment in reef fishes caused by ocean acidification at CO2 seeps. Nature Climate Change, 4. pp. 487-492.

Emslie, M.J., Logan, M., Ceccarelli, D.M., Cheal, A.J., Hoey, A.S., Miller, I., and Sweatman, H.P.A. (2012) Regional-scale variation in the distribution and abundance of farming damselfishes on Australia's Great Barrier Reef. Marine Biology, 159 (6). pp. 1293-1304.

Munday, Philip L., Cheal, Alistair J., Graham, Nicholas A.J., Meekan, Mark, Pratchett, Morgan S., Sheaves, Marcus, Sweatman, Hugh, and Wilson, Shaun K. (2012) Tropical coastal fish. In: Ploczanska, E.S., Hobday, A.J., and Richardson, A.J., (eds.) A Marine Climate Change Impacts and Adaptation Report Card for Australia. CSIRO Marine and Atmospheric Research, Brisbane, QLD, Australia, pp. 281-306.

Emslie, M.J., Pratchett, M.S., and Cheal, A.J. (2011) Effects of different disturbance types on butterflyfish communities of Australia's Great Barrier Reef. Coral Reefs, 30 (2). pp. 461-471.

Emslie, M.J., Pratchett, M.S., Cheal, A.J., and Osborne, K. (2010) Great Barrier Reef butterflyfish community structure: the role of shelf position and benthic community type. Coral Reefs, 29 (3). pp. 705-715.

Wilson, S.K., Adjeroud, M., Bellwood, D.R., Berumen, M.L., Booth, D., Bozec, Y.-Marie, Chabanet, P., Cheal, A., Cinner, J., Depczynski, M., Feary, D.A., Gagliano, M., Graham, Nicholas, Halford, A.H., Halpern, B.S., Harborne, A.R., Hoey, A.S., Holbrook, S.J., Jones, G.P., Kulbiki, M., Letourneur, Y., De Loma, T.L., McClanahan, T, McCormick, M.I., Meekan, M.G., Mumby, P. J., Munday, P.L., Öhman, M.C., Pratchett, M.S., Riegl, B., Sano, M., Schmitt, R.J., and Syms, C. (2010) Crucial knowledge gaps in current understanding of climate change impacts on coral reef fishes. Journal of Experimental Biology, 213. pp. 894-900.

Wilson, S.K., Dolman, A.M., Cheal, A.J., Emslie, M.J., Pratchett, M.S., and Sweatman, H.P.A. (2009) Maintenance of fish diversity on disturbed coral reefs. Coral Reefs, 28 (1). pp. 3-14.

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Russ, Garry R., Cheal, Alistair J., Dolman, Andrew M., Emslie, Michael J., Evans, Richard D., Miller, Ian, Sweatman, Hugh, and Williamson, David H. (2008) Rapid increase in fish numbers follows creation of world's largest marine reserve network. Current Biology, 18 (12). pp. 514-515.

Wilson, Shaun K., Burgess, Scott C., Cheal, Alistair J., Emslie, Mike, Fisher, Rebecca, Miller, Ian, Polunin, Nicholas V.C., and Sweatman, Hugh P.A. (2008) Habitat utilization by coral reef fish: implications for specialists vs. generalists in a changing environment. Journal of Animal Ecology, 77 (2). pp. 220-228.