Hsu, Tsai Hsuan Tony, Gordon, Sophie, Ferrari, Renata, Hoey, Andrew S., and Figueira, Will F. (2025) Optimizing remote underwater video sampling to quantify relative abundance, richness, and corallivory rates of reef fish. Coral Reefs, 44 (2). e1001569. pp. 435-449.

Remmers, Tiny, Boutros, Nader, Wyatt, Mathew, Gordon, Sophie, Toor, Maren, Roelfsema, Chris, Fabricius, Katharina, Grech, Alana, Lechene, Marine, and Ferrari Legorreta, Renata (2025) RapidBenthos: Automated segmentation and multi‐view classification of coral reef communities from photogrammetric reconstruction. Methods in Ecology and Evolution, 16 (2). pp. 427-441.

Remmers, Tiny, Grech, Alana, Roelfsema, Chris, Gordon, Sophie, Lechene, Marine, and Ferrari, Renata (2024) Close-range underwater photogrammetry for coral reef ecology: a systematic literature review. Coral Reefs, 43. pp. 35-52.

Lechene, Marine A.A., Figueira, Will F., Murray, Nicholas J., Aston, Eoghan A., Gordon, Sophie E., and Ferrari, Renata (2024) Evaluating error sources to improve precision in the co-registration of underwater 3D models. Ecological Informatics, 81. 102632.

Ford-Learner, Nicholas, Gordon, Sophie, Smallhorn-West, Patrick, Afu, Sioeli, Aisea, Latu, Fatongiatu, Viliami, Hanisi, Lisiate, Kioa, Sela, Lokotui, Sesimani, Ma'U Fatiaki, Katrina, Ngaluafe, Poasi, Pau'U, Vetekina, Shedrawi, George, Stone, Karen, Tuiano, Tonga, and Malimali, Siola'a (2024) Status of monitoring and evaluation of Tonga's Special Management Area program. Pacific Conservation Biology, 30. PC24003.

Gordon, Sophie E., Wingfield, Max, Smallhorn-West, Patrick F., Malimali, Siola’a, Halafihi, Tu’ikologahau, Schoeman, David S., and Southgate, Paul C. (2021) Spatio-Temporal Variation in Growth Performance and Condition of the Winged Pearl Oyster Pteria penguin. Frontiers in Marine Science, 8. 618910.

Smallhorn-West, Patrick, Gordon, Sophie, Stone, Karen, Ceccarelli, Daniela, Malimali, Siola'a, Halafihi, Tu'ikolongahau, Wyatt, Mathew, Bridge, Tom, Pressey, Robert, and Jones, Geoffrey (2020) Biophysical and anthropogenic influences on the status of Tonga's coral reefs and reef fish fishery. PLoS One, 15 (11). e0241146.

Smallhorn-West, Patrick, Garvin, J.B., Slayback, D.A., DeCarlo, T.M., Gordon, S.E., Fitzgerald, S.H., Halafihi, T., Jones, G.P., and Bridge, T.C.L. (2020) Coral reef annihilation, persistence and recovery at Earth's youngest volcanic island. Coral Reefs, 39. pp. 529-536.