Naseem, Muhammad Noman, Raza, Ali, Allavena, Rachel, McGowan, Michael, Morgan, Jess A.T., Constantinoiu, Constantin, Tabor, Ala E., and James, Peter (2021) Development and validation of novel PCR assays for the diagnosis of bovine Stephanofilariasis and detection of Stephanofilaria sp. nematodes in vector flies. Pathogens, 10 (9). 1211.

Tavakol, Sareh, Blair, David, Morgan, Jess A.T., Halajian, Ali, and Luus-Powell, Wilmien J. (2021) Molecular characterization of two Australian temnocephalans (Temnocephalida, Platyhelminthes) introduced with alien crayfish (Parastacidae, Decapoda) into South Africa. Aquaculture Research, 52 (10). pp. 4613-4618.

Morgan, Jess A.T., Macbeth, Michael, Broderick, Damien, Whatmore, Paul, Street, Raewyn, Welch, David J., and Ovenden, Jennifer R. (2013) Hybridisation, paternal leakage and mitochondrial DNA linearization in three anomalous fish (Scombridae). Mitochondrion, 13 (6). pp. 852-861.

Morgan, Jess A.T., Harry, Alastair V., Welch, David J., Street, Raewyn, White, Jimmy, Geraghty, Pascal T., Macbeth, William G., Tobin, Andrew, Simpfendorfer, Colin A., and Ovenden, Jennifer R. (2012) Detection of interspecies hybridisation in Chondrichthyes: hybrids and hybrid offspring between Australian (Carcharhinus tilstoni) and common (C. limbatus) blacktip shark found in an Australian fishery. Conservation Genetics, 13 (2). pp. 455-463.

Harry, A.V., Morgan, J.A.T., Ovenden, J.R., Tobin, A.J., Welch, D.J., and Simpfendorfer, C.A. (2012) Comparison of the reproductive ecology of two sympatric blacktip sharks (Carcharhinus limbatus and Carcharhinus tilstoni) off north-eastern Australia with species identification inferred from vertebral counts. Journal of Fish Biology, 81 (4). pp. 1-9.

Morgan, Jess A.T., Welch, David J., Harry, Alistair V., Street, Raewyn, Broderick, Damien, and Ovenden, Jennifer R. (2011) A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis. Molecular Ecology, 11 (5). pp. 813-819.

Ovenden, Jennifer R., Morgan, Jess A.T., Street, Raewyn, Tobin, Andrew, Simpfendorfer, Colin, Macbeth, William, and Welch, David (2011) Negligible evidence for regional genetic population structure for two shark species Rhizoprionodon acutus (Rüppell, 1837) and Sphyrna lewini (Griffith & Smith, 1834) with contrasting biology. Marine Biology, 158 (7). pp. 1497-1509.

Welch, D.J., Ovenden, J., Simpfendorfer, C., Tobin, A., Morgan, J.A.T., Street, R., White, J., Harry, A., Schroeder, R., and Macbeth, W.G. (2011) Stock structure of exploited shark species in north-eastern Australia. Report to the Fisheries Research & Development Corporation, Project 2007/035. Fishing & Fisheries Research Centre Technical Report No. 12. Report. Fisheries Research and Development Corporation, James Cook University, Townsville, QLD, Australia.

Eakin, C. Mark, Morgan, Jessica A., Heron, Scott F., Smith, Tyler B., Lui, Gang, Alvarez-Filip, Lorenzo, Baca, Bart, Bartels, Erich, Bastidas, Carolina, Bouchon, Claude, Brandt, Marilyn, Bruckner, Andrew W., Bunkley-Williams, Lucy, Cameron, Andrew, Causey, Billy D., Chiappone, Mark, Christensen, Tyler R.L., Crabbe, M. James C., Day, Owen, de la Guardia, Elena, Díaz-Pulido, Guillermo, DiResta, Daniel, Gil-Agudelo, Diego L., Gilliam, David S., Ginsburg, Robert N., Gore, Shannon, Guzmán, Héctor M., Hendee, James C., Hernández-Delgado, Edwin A., Husain, Ellen, Jeffrey, Christopher F.G., Jones, Ross J., Jordán-Dahlgren, Eric, Kaufman, Les S., Kline, David I., Kramer, Philip A., Lang, Judith C., Lirman, Diego, Mallela, Jennie, Manfrino, Carrie, Maréchal, Jean-Phillipe, Marks, Ken, Mihaly, Jennifer, Miller, W. Jeff, Mueller, Erich M., Muller, Erinn M., Toro, Carlos A. Orozco, Oxenford, Hazel A., Ponce-Taylor, Daniel, Quinn, Norman, Ritchie, Kim B., Rodríguez, Sebastián, Ramírez, Alberto Rodríguez, Romano, Sandra, Samhouri, Jameal F., Sánchez, Juan A., Schmahl, George P., Shank, Burton V., Skirving, William J., Steiner, Sascha C.C., Villamizar, Estrella, Walsh, Shiela M., Walter, Cory, Weil, Ernesto, Williams, Ernest H., Roberson, Kimberly Woody, and Yusuf, Yusri (2010) Caribbean corals in crisis: record thermal stress, bleaching, and mortality in 2005. PLoS ONE, 5 (11). e13969.

James, Timothy Y., Litvintseva, Anastasia P., Vilgalys, Rytas, Morgan, Jess A.T., Taylor, John W., Fisher, Matthew C., Berger, Lee, Weldon, Ché, du Preez, Louis, and Longcore, Joyce E. (2009) Rapid global expansion of the fungal disease chytridiomycosis into declining and healthy amphibian populations. PLoS Pathogens, 5 (5). - .

Morgan, J.A.T., Morris, G.M., Wlodek, B.M., Byrnes, R., Jenner, M., Constantinoiu, C.C., Anderson, G.R., Lew-Tabor, A.E., Molloy, J.B., Gasser, R.B., and Jorgensen, W.K. (2009) Real-time polymerase chain reaction (PCR) assays for the specific detection and quantification of seven Eimeria species that cause coccidiosis in chickens. Molecular and Cellular Probes, 23 (2). pp. 83-89.

Morgan, Jess A.T., Constantinoiu, Constantin C., and Jorgensen, Wayne K. (2009) New Diagnostic Assays to Improve Control of Coccidiosis in Poultry. Rural Industries Research and Development Corporation, Australia.

Rachowicz, Lara J., Hero, Jean-Marc, Alford, Ross A., Taylor, John W., Morgan, Jess A.T., Vredenburg, Vance T., Collins, James P., and Briggs, Cheryl J. (2005) The novel and endemic pathogen hypotheses: competing explanations for the origin of emerging infectious diseases of wildlife. Conservation Biology, 19 (5). pp. 1441-1448.

Morgan, Jessica A., and Blair, David (2000) Molecular biology of echinostomes. In: Fried, Bernard, and Graczyk, Thaddeus K., (eds.) Echinostomes as Experimental Models for Biological Research. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp. 245-266.