Meehan, Michael T., Hughes, Angus, Ragonnet, Romain R., Adekunle, Adeshina I., Trauer, James M., Jayasundara, Pavithra, McBryde, Emma S., and Henderson, Alec S. (2023) Replicating superspreader dynamics with compartmental models. Scientific Reports, 13. 15319.

Hughes, Angus, Ragonnet, Romain, Jayasundara, Pavithra, Ngo, Hoang Anh, de Lara-Tuprio, Elvira, Estuar, Maria Regina Justina, Teng, Timothy Robin, Boon, Law Kian, Peariasamy, Kalaiarasu M., Chong, Zhuo Lin, Ghazali, Izzuna Mudla M., Fox, Greg J., Nguyen, Thu Anh, Le, Linh Vi, Abayawardana, Milinda, Shipman, David, McBryde, Emma S., Meehan, Michael T., Caldwell, Jamie M., and Trauer, James M. (2022) COVID-19 collaborative modelling for policy response in the Philippines, Malaysia and Vietnam. The Lancet Regional Health - Western Pacific, 29. 100563.

Ragonnet, Romain, Williams, Bridget M., Largen, Angela, Nasa, Joaquin, Jack, Tom, Langinlur, Mailynn K., Ko, Eunyoung, Rahevar, Kalpeshsinh, Islam, Tauhid, Denholm, Justin T., Marais, Ben J., Marks, Guy B., McBryde, Emma S., and Trauer, James M. (2022) Estimating the long-term effects of mass screening for latent and active tuberculosis in the Marshall Islands. International Journal of Epidemiology, 51 (5). pp. 1433-1445.

Shaweno, Debebe, Trauer, James M., Doan, Tan N., Denholm, Justin T., and McBryde, Emma S. (2021) Geospatial clustering and modelling provide policy guidance to distribute funding for active TB case finding in Ethiopia. Epidemics, 36. 100470.

McBryde, Emma, Meehan, Michael T., Caldwell, Jamie M., Adekunle, Adeshina I., Ogunlade, Samson T., Kuddus, Md Abdul, Ragonnet, Romain, Jayasundara, Pavithra, Trauer, James M., and Cope, Robert C. (2021) Modelling direct and herd protection effects of vaccination against the SARS-CoV-2 Delta variant in Australia. Medical Journal of Australia, 215 (9). pp. 427-432.

Ragonnet, Romain, Flegg, Jennifer A., Brilleman, Samuel L., Tiemersma, Edine W., Melsew, Yayehirad A., McBryde, Emma S., and Trauer, James M. (2021) Revisiting the Natural History of Pulmonary Tuberculosis: A Bayesian Estimation of Natural Recovery and Mortality Rates. Clinical Infectious Diseases, 73 (1). e88-e96.

Jayasundara, Pavithra, Peariasamy, Kalaiarasu M., Law, Kian Boon, Abd Rahim, Ku Nurhasni Ku, Lee, Sit Wai, Ghazali, Izzuna Mudla M., Abayawardana, Milinda, Linh-Vi, Le, Khalaf, Rukun K. S., Razali, Karina, Le, Xuan, Chong, Zhuo Lin, McBryde, Emma S., Meehan, Michael T., Caldwell, Jamie M., Ragonnet, Romain, and Trauer, James M. (2021) Sustaining effective COVID-19 control in Malaysia through large-scale vaccination. Epidemics, 37. 100517.

Trauer, James M., Marais, Ben J., Ragonnet, Romain, Savulescu, Julian, and McBryde, Emma (2021) Time for a clear national COVID-19 strategy. Medical Journal of Australia, 214 (2). 94-94.e1.

Trauer, James M., Kawai, Andrew, Coussens, Anna K., Datta, Manjula, Williams, Bridget M., McBryde, Emma S., and Ragonnet, Romain (2021) Timing of Mycobacterium tuberculosis exposure explains variation in BCG effectiveness: A systematic review and meta-analysis. Thorax, 76 (11). pp. 1131-1141.

Trauer, James M., Williams, Bridget, Laemmle-Ruff, Ingrid, Horyniak, Danielle, Caplice, Lila V.Soares, McBryde, Emma S., Majumdar, Suman S., Graham, Stephen, and Hellard, Margaret E. (2021) Tuberculosis in migrants to Australia: Outcomes of a national screening program. The Lancet Regional Health - Western Pacific, 10. 100135.

Estill, Janne, Islam, Tauhid, Houben, Rein M.G.J., Rudman, Jamie, Ragonnet, Romain, McBryde, Emma S., Trauer, James M., Orel, Erol, Nguyen, Anh Tuan, Rahevar, Kalpeshsinh, Morishita, Fukushi, Oh, Kyung Hyun, Raviglione, Mario C., and Keiser, Olivia (2021) Tuberculosis in the Western Pacific Region: Estimating the burden of disease and return on investment 2020–2030 in four countries. The Lancet Regional Health - Western Pacific, 11. 100147.

Caldwell, Jamie M., de Lara-Tuprio, Elvira, Estuar, Maria Regina Justina E., Sarmiento, Raymond Francis R., Abayawardana, Milinda, Leong, Robert Neil F., Gray, Richard T., Wood, James G., Le, Linh-Vi, McBryde, Emma S., Ragonnet, Romain, and Trauer, James M. (2021) Understanding COVID-19 dynamics and the effects of interventions in the Philippines: a mathematical modelling study. Lancet Regional Health - Western Pacific, 14. 100211.

Trauer, James M., Lydeamore, Michael J., Dalton, Gregory W., Pilcher, David, Meehan, Michael T., McBryde, Emma S., Cheng, Allen C., Sutton, Brett, and Ragonnet, Romain (2021) Understanding how Victoria, Australia gained control of its second COVID-19 wave. Nature Communications, 12. 6266.

Adekunle, Adeshina, Meehan, Michael, Rojas-Alvarez, Diana, Trauer, James, and McBryde, Emma (2020) Delaying the COVID‐19 epidemic in Australia: evaluating the effectiveness of international travel bans. Australian and New Zealand Journal of Public Health, 44 (4). pp. 257-259.

Meehan, Michael T., Rojas, Diana P., Adekunle, Adeshina I., Adegboye, Oyelola A., Caldwell, Jamie M., Turek, Evelyn, Williams, Bridget, Trauer, James M., and McBryde, Emma S. (2020) Modelling insights into the COVID-19 pandemic. Paediatric Respiratory Reviews, 35. pp. 64-69.

Fox, Gregory J., Trauer, James M., and McBryde, Emma (2020) Modelling the impact of COVID-19 on intensive care services in New South Wales. Medical Journal of Australia, 212 (10). pp. 468-469.

McBryde, Emma S., Meehan, Michael T., Adegboye, Oyelola A., Adekunle, Adeshina I., Caldwell, Jamie M., Pak, Anton, Rojas, Diana P., Williams, Bridget M., and Trauer, James M. (2020) Role of modelling in COVID-19 policy development. Paediatric Respiratory Reviews, 35. pp. 57-60.

McBryde, Emma S., Meehan, Michael T., Doan, Tan N., Ragonnet, Romain, Marais, Ben J., Guernier, Vanina, and Trauer, James M. (2017) The risk of global epidemic replacement with drug-resistant Mycobacterium tuberculosis strains. International Journal of Infectious Diseases, 56. pp. 14-20.

Ragonnet, Romain, Trauer, James M., Denholm, Justin T., Marais, Ben J., and McBryde, Emma S. (2017) High rates of multidrug-resistant and rifampicin-resistant tuberculosis among re-treatment cases: where do they come from? BMC Infectious Diseases, 17 (36). pp. 1-10.

Ragonnet, R. , Trauer, J.M. , McBryde, E.S., Houben, R.M.G.J., Denholm, J.T., Handel, A., and Sumner, T. (2017) Is IPT more effective in high-burden settings? Modelling the effect of tuberculosis incidence on IPT impact. The International Journal of Tuberculosis and Lung Disease, 21 (1). pp. 60-66.

Trauer, James M., Denholm, Justin, Waseem, Saba, Ragonnet, Romain, and McBryde, Emma (2016) Scenario analysis for programmatic tuberculosis control in Western Province, Papua New Guinea. American Journal of Epidemiology, 183 (12). pp. 1138-1148.

Ragonnet, Romain, Trauer, James M., Denholm, Justin T., Geard, Nicholas L., Hellard, Margaret, and McBryde, Emma (2015) Vaccination programs for endemic infections: modelling real versus apparent impacts of vaccine and infection characteristics. Scientific Reports, 5. 15468. pp. 1-11.

Trauer, James M., Denholm, Justin T., and McBryde, Emma S. (2014) Construction of a mathematical model for tuberculosis transmission in highly endemic regions of the Asia-Pacific. Journal of Theoretical Biology, 358. pp. 74-84.