Welch, David J., Newman, Stephen J., Buckworth, Rik C., Ovenden, Jennifer R., Broderick, Damien, Lester, Robert J.G., Gribble, Neil A., Ballagh, Aaron C., Charters, Robbie A., Stapley, Jason, Street, Raewyn, Garrett, Rod N., and Begg, Gavin A. (2015) Integrating different approaches in the definition of biological stocks: a northern Australian multi-jurisdictional fisheries example using grey mackerel, Scomberomorus semifasciatus. Marine Policy, 55. pp. 73-80.

Busilacchi, Sara, Russ, Garry R., Williams, Ashley J., Sutton, Stephen G., and Begg, Gavin A. (2013) The role of subsistence fishing in the hybrid economy of an indigenous community. Marine Policy, 37. pp. 183-191.

Busilacchi, Sara, Russ, Garry R., Williams, Ashley J., Begg, Gavin A., and Sutton, Stephen G. (2013) Quantifying changes in the subsistence reef fishery of indigenous communities in Torres Strait, Australia. Fisheries Research, 137. pp. 50-58.

Busilacchi, S., Williams, A.J., Russ, G.R., and Begg, G.A. (2012) Complexity of applying minimum legal sizes (MLS) of retention in an indigenous coral reef fishery. Fisheries Management and Ecology.

Williams, Ashley J., Little, L. Richard, and Begg, Gavin A. (2011) Balancing indigenous and non-indigenous commercial objectives in a coral reef finfish fishery. ICES Journal of Marine Science, 68 (5). pp. 834-847.

Brown, I., Sumpton, W., McLennan, M., Mayer, D., Campbell, M., Kirkwood, J., Butcher, A., Halliday, I., Mapleston, A., Welch, D., Begg, G.A., and Sawynok, B. (2010) An improved technique for estimating short-term survival of released line-caught fish, and an application comparing barotrauma-relief methods in red emperor (Lutjanus sebae Cuvier 1816). Journal of Experimental Marine Biology and Ecology, 385 (1-2). pp. 1-7.

Sumpton, W.D., Brown, I.W., Mayer, D.G., McLennan, M.F., Mapleston, A., Butcher, A.R., Welch, D.J., Kirkwood, J.M., Sawynok, B., and Begg, G.A. (2010) Assessing the effects of line capture and barotrauma relief procedures on post-release survival of key tropical reef fish species in Australia using recreational tagging clubs. Fisheries Management and Ecology, 17 (1). pp. 77-88.

Little, L. Richard, Punt, André E., Mapstone, Bruce D., Begg, Gavin A., Goldman, Barry, and Ellis, Nick (2009) Different responses to area closures and effort controls for sedentary and migratory harvested species in a multispecies coral reef linefishery. ICES Journal of Marine Science, 66 (9). pp. 1931-1941.

Little, L. Richard, Punt, Andre E., Mapstone, Bruce D., Begg, Gavin A., Goldman, Barry, and Williams, Ashley J. (2009) An agent-based model for simulating trading of multi-species fisheries quota. Ecological Modelling, 220 (23). pp. 3404-3412.

Williams, Ashley J., Davies, Campbell R., Mapstone, Bruce D., Currey, Leanne M., Welch, David J., Begg, Gavin, A., Ballagh, Aaron C., Choat, J. Howard, Murchie, Cameron D., and Simpfendorfer, Colin A. (2009) Age-based demography of humpback grouper Cromileptes altivelis: implications for fisheries management and conservation. Endangered Species Research, 9 (1). pp. 67-79.

Little, L. Richard, Punt, André E., Mapstone, Bruce D., Begg, Gavin A., Goldman, Barry, and Williams, Ashley (2009) A model for simulating trading of fisheries quota. In: Proceedings of 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation. pp. 2136-2142. From: 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation, 13–17 July 2009, Cairns, QLD, Australia.

Jones, A., Barnett, B., Williams, A.J., Grayson, J., Busilacchi, S., Duckworth, A., Evans-Illidge, E., Begg, G.A., and Murchie, C.D. (2008) Effective communication tools to engage Torres Strait Islanders in scientific research. Continental Shelf Research, 28 (16). pp. 2350-2356.

Williams, Ashley J., Ballagh, Aaron C., Begg, Gavin A., Murchie, Cameron D., and Currey, Leanne M. (2008) Harvest patterns and effort dynamics of indigenous and non-indigenous commercial sectors of the eastern Torres Strait reef line fishery. Continental Shelf Research, 28 (16). pp. 2117-2128.

Williams, Ashley J., Currey, Leanne M., Begg, Gavin A., Murchie, Cameron D., and Ballagh, Aaron C. (2008) Population biology of coral trout species in eastern Torres Strait: implications for fishery management. Continental Shelf Research, 28 (16). pp. 2129-2142.

Brown, I.W., Sumpton, W.D., McLennan, M., Welch, D.J., Kirkwood, J., Butcher, A., Mapleston, A., Mayer, D., Begg, G., Campbell, M., Halliday, I., and Sawynok, W. (2008) National Strategy for the Survival of Released Line-Caught Fish: tropical reef species (FRDC 2003/019). Report. Department of Primary Industries and Fisheries.

Mapleston, Amos, Welch, David, Begg, Gavin A., McLennan, Mark, Mayer, David, and Brown, Ian (2008) Effect of changes in hook pattern and size on catch rate, hooking location, injury and bleeding for a number of tropical reef fish species. Fisheries Research, 91 (2-3). pp. 203-211.

Welch, David J., Mapstone, Bruce D., and Begg, Gavin A. (2008) Spatial and temporal variation and effects of changes in management in discard rates from the commercial reef line fishery of the Great Barrier Reef, Australia. Fisheries Research, 90 (1-3). pp. 247-260.

Little, L. Rich, Begg, Gavin A., Goldman, Barry, Ellis, Nick, Mapstone, Bruce D., Punt, André E., Jones, Annabel, Sutton, Steve, and Williams, Ashley (2008) Modelling Multi-Species Targeting of Fishing Effort in the Queensland Coral Reef Fin Fish Fishery. Report. James Cook University Fishing & Fisheries Research Centre, Townsville, QLD, Australia.

Heath, D., Lou, D.C., Ovenden, J., and Begg, G.A. (2007) Effect of DNA extraction on ageing success in coral trout (Plectropomus leopardus) otoliths. Journal of Fish Biology, 71 (Supple). pp. 302-307.

Pears, R.J., Choat, J.H., Mapstone, B.D., and Begg, G.A. (2007) Reproductive biology of a large, aggregation-spawning serranid, Epinephelus fuscoguttatus (Forsskål): management implications. Journal of Fish Biology, 71 (3). pp. 795-817.

Marriott, R.J., Mapstone, B.D., and Begg, G.A. (2007) Age-specific demographic parameters, and their implications for management of the red bass, Lutjanus bohar (Forsskal 1775): a large, long-lived reef fish. Fisheries Research, 83 (2-3). pp. 204-215.

Lou, Dong C., Mapstone, Bruce D., Russ, Garry R., Begg, Gavin A., and Davies, Campbell R. (2007) Using otolith weight–age relationships to predict age based metrics of coral reef fish populations across different temporal scales. Fisheries Research, 83 (2-3). pp. 216-227.

Scott, Beth E., Marteinsdottir, Gudrun, Begg, Gavin A., Wright, Peter J., and Kjesbu, Olav Sigurd (2006) Effects of population size/age structure, condition and temporal dynamics of spawning on reproductive output in Atlantic cod (Gadus morhua). Ecological Modelling, 191 (3-4). pp. 383-415.

Pears, Rachel J., Choat, J. Howard, Mapstone, Bruce D., and Begg, Gavin A. (2006) Demography of a large grouper, Epinephelus fuscoguttatus, from Australia’s Great Barrier Reef: implications for fishery management. Marine Ecology Progress Series, 307. pp. 259-272.

Ballagh, Aaron C., Begg, Gavin A., Mapleston, Amos, and Tobin, Andrew (2006) Growth trends of Queensland east coast Spanish mackerel (Scomberomorus commerson) from otolith back-calculations. Marine and Freshwater Research, 57 (4). pp. 383-393.

Bergenius, Mikaela A.J., Mapstone, Bruce D., Begg, Gavin A., and Murchie, Cameron D. (2005) The use of otolith chemistry to determine stock structure of three epinepheline serranid coral reef fishes on the Great Barrier Reef, Australia. Fisheries Research, 72 (2-3). pp. 253-270.

Begg, Gavin A., Mapstone, Bruce D., Williams, Ashley J., Adams, Samantha, Davies, Campbell R., and Lou, Dong C. (2005) Multivariate life-history indices of exploited coral reef fish populations used to measure the performance of no-take zones in a marine protected area. Canadian Journal of Fisheries and Aquatic Sciences, 62 (3). pp. 679-692.

Lou, Dong C., Mapstone, Bruce D., Russ, Garry R., Davies, Campbell R., and Begg, Gavin A. (2005) Using otolith weight-age relationships to predict age-based metrics of coral reef fish populations at different spatial scales. Fisheries Research, 71 (3). pp. 279-294.

Begg, Gavin A., Campana, Steven E., Fowler, Anthony J., and Suthers, Iain M. (2005) Otolith research and application: current directions in innovation and implementation. Marine and Freshwater Research, 56 (5). pp. 477-483.

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