Items where Subject is "07 AGRICULTURAL AND VETERINARY SCIENCES > 0704 Fisheries Sciences > 070402 Aquatic Ecosystem Studies and Stock Assessment"

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Lacroix, Geneviève, Maes, Gregory E., Bolle, Loes J., and Volckaert, Filip A.M. (2013) Modelling dispersal dynamics of the early life stages of a marine flatfish (Solea solea L.). Journal of Sea Research, 84. pp. 13-25.

Dao, Hoc Tan, Todd, Erica V., and Jerry, Dean R. (2013) Characterization of polymorphic microsatellite loci for the spiny lobster Panulirus spp. and their utility to be applied to other Panulirus lobsters. Conservation Genetics Resources, 5 (1). pp. 43-46.

Currey, L.M., Williams, A.J., Mapstone, B.D., Davies, C.R., Carlos, G., Welch, D.J., Simpfendorfer, C.A., Ballagh, A.C., Penny, A.L., Grandecourt, E.M., Mapleston, A., Wiebkin, A.S., and Bean, K. (2013) Comparative biology of tropical Lethrinus species (Emperors): challenges for multi-species management. Journal of Fish Biology, 82 (3). pp. 764-788.

Smart, Jonathon J., Harry, Alastair V., Tobin, Andrew J., and Simpfendorfer, Colin A. (2013) Overcoming the constraints of low sample sizes to produce age and growth data for rare or threatened sharks. Aquatic Conservation, 23 (1). pp. 124-134.

Farley, J.H., Williams, A.J., Clear, N.P., Davies, C.R., and Nicol, S.J. (2013) Age estimation and validation for South Pacific albacore Thunnus alalunga. Journal of Fish Biology, 82 (5). pp. 1523-1544.

Williams, Ashley J., Leroy, Bruno M., Nicol, Simon J., Farley, Jessica H., Clear, Naomi P., Krusic-Golub, Kyne, and Davies, Campbell R. (2013) Comparison of daily- and annual- increment counts in otoliths of bigeye (Thunnus obesus), yellowfin (T. albacares), southern bluefin (T. maccoyii) and albacore (T. alalunga) tuna. ICES Journal of Marine Science, 70 (7). pp. 1439-1450.

Tobin, Andrew, Currey, Leanne, and Simpfendorfer, Colin (2013) Informing the vulnerability of species to spawning aggregation fishing using commercial catch data. Fisheries Research, 143. pp. 47-56.

Lind, Curtis E., Evans, Brad S., Elphinstone, Martin S., Taylor, Joseph J.U., and Jerry, Dean R. (2012) Phylogeography of a pearl oyster (Pinctada maxima) across the Indo-Australian Archipelago: evidence of strong regional structure and population expansions but no phylogenetic breaks. Biological Journal of the Linnean Society, 107 (3). pp. 632-646.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2012) Mortality rates for two shark species occupying a shared coastal environment. Fisheries Research, 125-126. pp. 184-189.

Moore, Bradley R., Simpfendorfer, Colin A., Newman, Stephen J., Stapley, Jason M., Allsop, Quentin, Sellin, Michelle J., and Welch, David J. (2012) Spatial variation in life history reveals insight into connectivity and geographic population structure of a tropical estuarine teleost: king threadfin, Polydactylus macrochir. Fisheries Research, 125-126. pp. 214-224.

Chin, Andrew, Tobin, Andrew, Simpfendorfer, Colin, and Heupel, Michelle (2012) Reef sharks and inshore habitats: patterns of occurrence and implications for vulnerability. Marine Ecology Progress Series, 460. pp. 115-125.

Yates, Peter M., Heupel, Michelle R., Tobin, Andrew J., and Simpfendorfer, Colin A. (2012) Diversity in young shark habitats provides the potential for portfolio effects. Marine Ecology Progress Series, 458. pp. 269-281.

Olsen, Esben Moland, Heupel, Michelle R., Simpfendorfer, Colin A., and Moland, Even (2012) Harvest selection on Atlantic cod behavioral traits: implications for spatial management. Ecology and Evolution, 2 (7). pp. 1549-1562.

Ballagh, Aaron C., Welch, David J., Newman, Stephen J., Allsop, Quentin, and Stapley, Jason M. (2012) Stock structure of the blue threadfin (Eleutheronema tetradactylum) across northern Australia derived from life-history characteristics. Fisheries Research, 121-122. pp. 63-72.

Nielsen, Einar E., Cariani, Alessia, Aoidh, Eion Mac, Maes, Gregory E., Milano, Ilaria, Ogden, Rob, Taylor, Martin, Hemmer-Hansen, Jakob, Babbucci, Massimiliano, Bargelloni, Luca, Bekkevold, Dorte, Diopere, Eveline, Grenfell, Leonie, Helyar, Sarah, Limborg, Morten T., Martinsohn, Jann T., McEwing, Ross, Panitz, Frank, Patarnello, Tomaso, Tinti, Fausto, Van Houdt, Jeroen K.J., Volckaert, Filip A.M., Waples, Robin S., FishPop Trace Consortium, , and Carvalho, Gary R. (2012) Gene-associated markers provide tools for tackling illegal fishing and false eco-certification. Nature Communications, 3 (5). pp. 1-6.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2012) Evaluating marine protected areas for the conservation of tropical coastal sharks. Biological Conservation, 148 (1). pp. 200-209.

Cuveliers, E.L., Larmuseau, M.H.D., Hellemans, B., Verherstraeten, S.L.N.A., Volckaert, F.A.M., and Maes, G.E. (2012) Multi-marker estimate of genetic connectivity of sole (Solea solea) in the North-East Atlantic Ocean. Marine Biology, 159 (6). pp. 1239-1253.

Harry, A.V., Morgan, J.A.T., Ovenden, J.R., Tobin, A.J., Welch, D.J., and Simpfendorfer, C.A. (2012) Comparison of the reproductive ecology of two sympatric blacktip sharks (Carcharhinus limbatus and Carcharhinus tilstoni) off north-eastern Australia with species identification inferred from vertebral counts. Journal of Fish Biology, 81 (4). pp. 1-9.

Norton, Shelley L., Wiley, Tonya R., Carlson, John K., Frick, Amanda L., Poulakis, Gregg R., and Simpfendorfer, Colin A. (2012) Designating critical habitat for juvenile endangered smalltooth sawfish in the United States. Marine and Coastal Fisheries: dynamics, management, and ecosystem science, 4 (1). pp. 473-480.

Knip, D.M., Heupel, M.R., and Simpfendorfer, C.A. (2012) Habitat use and spatial segregation of adult spottail sharks Carcharhinus sorrah in tropical nearshore waters. Journal of Fish Biology, 80 (4). pp. 767-784.

Moore, B.R., Welch, D.J., Newman, S.J., and Lester, R.J.G. (2012) Parasites as indicators of movement and population connectivity of a non-diadromous, tropical estuarine teleost: king threadfin Polydactylus macrochir. Journal of Fish Biology, 81 (1). pp. 230-252.

Hussey, N.E., MacNeil, M.A., Olin, J. A., McMeans, B. C., Kinney, Michael, Chapman, D. D., and Fisk, A. T. (2012) Stable isotopes and elasmobranchs: tissue types, methods, applications and assumptions. Journal of Fish Biology, 80 (5). pp. 1449-1484.

Simpfendorfer, Colin A., Olsen, Esben M., Heupel, Michelle, and Moland, Even (2012) Three-dimensional kernel utilization distributions improve estimates of space use in aquatic animals. Canadian Journal of Fisheries and Aquatic Sciences, 69 (3). pp. 565-572.

Knip, Danielle M., Heupel, Michelle R., and Simpfendorfer, Colin A. (2012) To roam or to home: site fidelity in a tropical coastal shark. Marine Biology, 159 (8). pp. 1647-1657.

Jack, Lucy, Wing, Stephen R., Hu, Yi, and Roberts, May (2011) Natural trace elemental markers for adult red rock lobsters Jasus edwardsii vary among replicate distinct water masses. Marine Ecology Progress Series, 443. pp. 141-151.

Kinney, Michael J., Hussey, Nigel E., Fisk, Aaron T., Tobin, Andrew J., and Simpfendorfer, Colin A. (2011) Communal or competitive? Stable isotope analysis provides evidence of resource partitioning within a communal shark nursery. Marine Ecology Progress Series, 439. pp. 263-276.

Miller, Penny A., Fitch, Alison J., Gardner, Michael, Hutson, Kate S., and Mair, Graham (2011) Genetic population structure of Yellowtail Kingfish (Seriola lalandi) in temperate Australasian waters inferred from microsatellite markers and mitochondrial DNA. Aquaculture, 319 (3-4). pp. 328-336.

Chapman, Demian S., Simpfendorfer, Colin A., Wiley, Tonya R., Poulakis, Gregg R., Curtis, Caitlin, Tringali, Michael, Carlson, John K., and Feldheim, Kevin A. (2011) Genetic diversity despite population collapse in a critically endangered marine fish: the smalltooth sawfish (Pristis pectinata). Journal of Heredity, 102 (6). pp. 643-652.

Cuveliers, E.L., Volckaert, F.A.M., Rijnsdorp, A.D., Larmuseau, M.H.D., and Maes, G.E. (2011) Temporal genetic stability and high effective population size despite fisheries-induced life-history trait evolution in the North Sea sole. Molecular Ecology, 20 (17). pp. 3555-3568.

Morgan, Jess A.T., Welch, David J., Harry, Alistair V., Street, Raewyn, Broderick, Damien, and Ovenden, Jennifer R. (2011) A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis. Molecular Ecology, 11 (5). pp. 813-819.

Heupel, Michelle R., and Simpfendorfer, Colin A. (2011) Estuarine nursery areas provide a low-mortality environment for young bull sharks Carcharhinus leucas. Marine Ecology Progress Series, 433. pp. 237-244.

Ovenden, Jennifer R., Morgan, Jess A.T., Street, Raewyn, Tobin, Andrew, Simpfendorfer, Colin, Macbeth, William, and Welch, David (2011) Negligible evidence for regional genetic population structure for two shark species Rhizoprionodon acutus (Rüppell, 1837) and Sphyrna lewini (Griffith & Smith, 1834) with contrasting biology. Marine Biology, 158 (7). pp. 1497-1509.

Harry, Alastair V., Tobin, Andrew J., Simpfendorfer, Colin A., Welch, David J., Mapleston, Amos, White, Jimmy, Williams, Ashley J., and Stapley, Jason (2011) Evaluating catch and mitigating risk in a multispecies, tropical, inshore shark fishery within the Great Barrier Reef World Heritage Area. Marine and Freshwater Research, 62 (6). pp. 710-721.

Heupel, Michelle R., and Simpfendorfer, Colin A. (2011) Shark biology, ecology and management: introduction. Marine and Freshwater Research, 62 (6). p. 517.

Knip, Danielle M., Heupel, Michelle R., Simpfendorfer, Colin A., Tobin, Andrew J., and Moloney, James (2011) Wet-season effects on the distribution of juvenile pigeye sharks, Carcharhinus amboinensis, in tropical nearshore waters. Marine and Freshwater Research, 62 (6). pp. 658-667.

Simpfendorfer, C.A., Heupel, M.R., White, W.T., and Dulvy, N.K. (2011) The importance of research and public opinion to conservation management of sharks and rays: a synthesis. Marine and Freshwater Research, 62 (6). pp. 518-527.

Harry, A.V., MacBeth, W.G., Gutteridge, A.N., and Simpfendorfer, C.A. (2011) The life histories of endangered hammerhead sharks (Carcharhiniformes, Sphyrnidae) from the east coast of Australia. Journal of Fish Biology, 78 (7). pp. 2026-2051.

Heupel, Michelle R., Knip, Danielle M., de Lestang, Paul, Allsop, Quentin A., and Grace, Blair S. (2011) Short-term movement of barramundi in a seasonally closed freshwater habitat. Aquatic Biology, 12 (2). pp. 147-155.

Bednarek, Angela T., Cooper , Andrew B., Cresswell, Katherine A., Mangel, Marc, Satterthwaite, William H., Simpfendorfer, Colin A., and Wiedenmann, John R. (2011) The certainty of uncertainty in marine conservation and what to do about it. Bulletin of Marine Science, 87 (2). pp. 177-195.

Knip, Danielle M., Heupel, Michelle R., Simpfendorfer, Colin A., Tobin, Andrew J., and Moloney, James (2011) Ontogenetic shifts in movement and habitat use of juvenile pigeye sharks Carcharhinus amboinensis in a tropical nearshore region. Marine Ecology Progress Series, 425. pp. 233-246.

Moore, B.R., Stapley, J., Allsop, Q., Newman, S.J., Ballagh, A., Welch, D.J., and Lester, R.J.G. (2011) Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia, as indicated by parasites. Journal of Fish Biology, 78 (3). pp. 923-936.

Simpfendorfer, Colin A., Yeiser, Beau G., Wiley, Tonya R., Poulakis, Gregg R., Stevens, Philip W., and Heupel, Michelle R. (2011) Environmental influences on the spatial ecology of juvenile smalltooth sawfish (Pristis pectinata): results from acoustic monitoring. PLoS One, 6 (2). pp. 1-12.

Schaerlaekens, Dirk G., Dekker, Willem, Wickström, Håkan, Volckaert, Filip A.M., and Maes, Gregory E. (2011) Extracting a century of preserved molecular and population demographic data from archived otoliths in the endangered European eel (Anguilla anguilla L.). Journal of Experimental Marine Biology and Ecology, 398 (1-2). pp. 56-62.

Hutson, K.S., Brock, E.L., and Steer, M.A. (2011) Spatial variation in parasite abundance: evidence of geographical population structuring in southern garfish Hyporhamphus melanochir. Journal of Fish Biology, 78 (1). pp. 166-182.

Poulakis, Gregg R., Stevens, Philip W., Timmers, Amy A., Wiley, Tonya R., and Simpfendorfer, Colin A. (2011) Abiotic affinities and spatiotemporal distribution of the endangered smalltooth sawfish, Pristis pectinata, in a south-western Florida nursery. Marine and Freshwater Research, 62 (10). pp. 1165-1177.

Awruch, C.A., Simpfendorfer, C., and Pankhurst, N.W. (2011) Evaluation and use of a portable field kit for measuring whole-blood lactate in sharks. Marine and Freshwater Research, 62 (6). pp. 694-699.

Newman, Stephen J., Allsop, Quentin, Ballagh, Aaron C., Garrett, Rod N., Gribble, Neil, Meeuwig, Jessica J., Mitsopoulos, Gabby E.A., Moore, Bradley R., Pember, Matthew B., Rome, Ben M., Saunders, Thor, Skepper, Craig L., Stapley, Jason M., van Herwerden, Lynne, and Welch, David J. (2010) Variation in stable isotope (δ18O and δ13C) signatures in the sagittal otolith carbonate of king threadfin, Polydactylus macrochir across northern Australia reveals multifaceted stock structure. Journal of Experimental Marine Biology and Ecology, 396 (1). pp. 53-60.

Harry, Alastair V., Simpfendorfer, Colin A., and Tobin, Andrew J. (2010) Improving age, growth, and maturity estimates for aseasonally reproducing chondrichthyans. Fisheries Research, 106 (3). pp. 393-403.

Heupel, M.R., and Simpfendorfer, C.A. (2010) Science or slaughter: need for lethal sampling of sharks. Conservation Biology, 24 (5). pp. 1212-1218.

Simpfendorfer, Colin A., Wiley, Tonya R., and Yeiser, Beau G. (2010) Improving conservation planning for an endangered sawfish using data from acoustic telemetry. Biological Conservation, 143 (6). pp. 1460-1469.

Williams, Ashley J., Little, L. Richard, Punt, André E., Mapstone, Bruce D., Davies, Campbell R., and Heupel, Michelle R. (2010) Exploring movement patterns of an exploited coral reef fish when tagging data are limited. Marine Ecology Progress Series, 405. pp. 87-99.

Brown, I., Sumpton, W., McLennan, M., Mayer, D., Campbell, M., Kirkwood, J., Butcher, A., Halliday, I., Mapleston, A., Welch, D., Begg, G.A., and Sawynok, B. (2010) An improved technique for estimating short-term survival of released line-caught fish, and an application comparing barotrauma-relief methods in red emperor (Lutjanus sebae Cuvier 1816). Journal of Experimental Marine Biology and Ecology, 385 (1-2). pp. 1-7.

Cortés, Enric, Arocha, Freddy, Beerkircher, Lawrence, Carvalho, Felipe, Domingo, Andrés, Heupel, Michelle, Holtzhausen, Hannes, Santos, Miguel N., Ribera, Marta, and Simpfendorfer, Colin (2010) Ecological risk assessment of pelagic sharks caught in Atlantic pelagic longline fisheries. Aquatic Living Resources, 23 (1). pp. 25-34.

Heupel, Michelle R., Williams, Ashley J., Welch, David J., Davies, Campbell R., Penny, Ann, Kritzer, Jacob P., Marriott, Ross J., and Mapstone, Bruce D. (2010) Demographic characteristics of exploited tropical lutjanids: a comparative analysis. Fishery Bulletin, 108 (4). pp. 420-432.

Heupel, Michelle R., Williams, Ashley, Welch, David J., Davies, Campbell R., Adams, Samantha, Carlos, Gary, and Mapstone, Bruce D. (2010) Demography of a large exploited grouper, Plectropomus laevis: implications for fisheries management. Marine and Freshwater Research, 61 (2). pp. 184-195.

Feldheim, Kevin A., Chapman, Demian D., Simpfendorfer, Colin A., Richards, Vincent P., Shivji, Mahmood S., Wiley, Tonya R., Poulakis, Gregg R., Carlson, John K., Eng, Rowena, and Sagarese, Skyler (2010) Genetic tools to support the conservation of the endangered smalltooth sawfish, Pristis pectinata. Conservation Genetics Resources, 2 (1). pp. 105-113.

Heupel, Michelle R., Yeiser, Beau G., Collins, Angela B., Ortega, Lori, and Simpfendorfer, Colin A. (2010) Long-term presence and movement patterns of juvenile bull sharks, Carcharhinus leucas, in an estuarine river system. Marine and Freshwater Research, 61 (1). pp. 1-10.

Johnson, Johanna E., and Welch, David J. (2010) Marine fisheries management in a changing climate: a review of vulnerability and future options. Reviews in Fisheries Science, 18 (1). pp. 106-124.

Welch, David J., Mapstone, Bruce D., Davies, Campbell C., and Russ, Garry R. (2010) Spatial and fishing effects on sampling gear biases in a tropical reef line fishery. Marine and Freshwater Research, 61 (10). pp. 1134-1146.

Newman, Stephen J., Wright, Ian W., Rome, Ben M., Mackie, Michael C., Lewis, Paul D., Buckworth, Rik C., Ballagh, Aaron C., Garrett, Rod N., Stapley, Jason, Broderick, Damien, Ovenden, Jennifer R., and Welch, David J. (2010) Stock structure of Grey Mackerel, Scomberomorus semifasciatus (Pisces: Scombridae) across northern Australia, based on otolith stable isotope chemistry. Environmental Biology of Fishes, 89 (3-4). pp. 357-367.

Wiley, Tonya R., and Simpfendorfer, Colin A. (2010) Using public encounter data to direct recovery efforts for the endangered smalltooth sawfish Pristis pectinata. Endangered Species Research, 12 (3). pp. 179-191.

Charters, Robbie A., Lester, Robert J.G., Buckworth, Rik C., Newman, Stephen J., Ovenden, Jennifer R., Broderick, Damien, Kravchuck, Olena, Ballagh, Aaron, and Welch, David J. (2010) The stock structure of grey mackerel Scomberomorus semifasciatus in Australia as inferred from its parasite fauna. Fisheries Research, 101 (1-2). pp. 94-99.

Little, L. Richard, Punt, André E., Mapstone, Bruce D., Begg, Gavin A., Goldman, Barry, and Ellis, Nick (2009) Different responses to area closures and effort controls for sedentary and migratory harvested species in a multispecies coral reef linefishery. ICES Journal of Marine Science, 66 (9). pp. 1931-1941.

Little, L. Richard, Punt, Andre E., Mapstone, Bruce D., Begg, Gavin A., Goldman, Barry, and Williams, Ashley J. (2009) An agent-based model for simulating trading of multi-species fisheries quota. Ecological Modelling, 220 (23). pp. 3404-3412.

Thorson, James T., and Simpfendorfer, Colin A. (2009) Gear selectivity and sample size effects on growth curve selection in shark age and growth studies. Fisheries Research, 98 (1-3). pp. 75-84.

Williams, Ashley J., Davies, Campbell R., Mapstone, Bruce D., Currey, Leanne M., Welch, David J., Begg, Gavin, A., Ballagh, Aaron C., Choat, J. Howard, Murchie, Cameron D., and Simpfendorfer, Colin A. (2009) Age-based demography of humpback grouper Cromileptes altivelis: implications for fisheries management and conservation. Endangered Species Research, 9 (1). pp. 67-79.

Simpfendorfer, Colin A., and Kyne, Peter M. (2009) Limited potential to recover from overfishing raises concerns for deep-sea sharks, rays and chimaeras. Environmental Conservation, 36. pp. 97-103.

Carlson, John K., Heupel, Michelle R., Bethea, Dana M., and Hollensead, Lisa D. (2008) Coastal habitat use and residency of juvenile Atlantic sharpnose sharks (Rhizoprionodon terraenovae). Estuaries and Coasts, 31 (5). pp. 931-940.

Williams, Ashley J., Ballagh, Aaron C., Begg, Gavin A., Murchie, Cameron D., and Currey, Leanne M. (2008) Harvest patterns and effort dynamics of indigenous and non-indigenous commercial sectors of the eastern Torres Strait reef line fishery. Continental Shelf Research, 28 (16). pp. 2117-2128.

Yeiser, B.G., Heupel, M.R., and Simpfendorfer, C. A. (2008) Residence and movement patterns of bull (Carcharhinus leucas) and lemon (Negaprion brevirostris) sharks within a coastal estuary. Marine and Freshwater Research, 59. pp. 489-501.

Simpfendorfer, Colin Ashley, Heupel, Michelle RaNae, and Collins, Angela B. (2008) Variation in the performance of acoustic receivers and its implication for positioning algorithms in a riverine setting. Canadian Journal of Fisheries and Aquatic Sciences, 65 (3). pp. 482-492.

Frisch, A.J., Baker, R., Hobbs, J-P. A., and Nankervis, L. (2008) A quantitative comparison of recreational spearfishing and linefishing on the Great Barrier Reef: implications for management of multi-sector coral reef fisheries. Coral Reefs, 27 (1). pp. 85-95.

Al-Habsi, S. H., Sweeting, C. J., Polunin, N. V. C., and Graham, Nicholas (2008) δ15N and δ13C elucidation of size structured food webs in a Western Arabian Sea demersal trawl assemblage. Marine Ecology Progress Series, 353. pp. 55-63.

Simpfendorfer, C. A., Poulakis, G. R., O'Donnell, P. M, and Wiley, T. R. (2008) Growth rates of juvenile smalltooth sawfish Pristis pectinata Latham in the western Atlantic. Journal of Fish Biology, 72 (3). pp. 711-723.

Mapstone, B.D., Little, L.R., Punt, A.E., Davies, C.R., Smith, A.D.M., Pantus, F., McDonald, A.D., Williams, A.J., and Jones, A. (2008) Management strategy evaluation for line fishing in the Great Barrier Reef: balancing conservation and multi-sector fishery objectives. Fisheries Research, 94 (3). pp. 315-329.

McAuley, R.B., Simpfendorfer, C.A., and Wright, I.W. (2007) Gillnet mesh selectivity of the sandbar shark (Carcharhinus plumbeus): implications of fisheries management. ICES Journal of Marine Science, 64 (9). pp. 1702-1709.

McAuley, Rory B., Simpfendorfer, Colin A., and Hall, Norm G. (2007) A method for evaluating the impacts of fishing mortality and stochastic influences on the demography of two long-live shark stocks. ICES Journal of Marine Science, 64 (9). pp. 1710-1722.

Williams, A.J., Mapstone, B.D., and Davies, C.R. (2007) Spatial and interannual patterns in growth of an exploited coral-reef fish. Journal of Fish Biology, 71 (4). pp. 970-992.

Bannister, R.J., Brinkman, R., Wolff, C., Battershill, C., and de Nys, R. (2007) The distribution and abundance of dictyoceratid sponges in relation to hydrodynamic features: identifying candidates and environmental conditions for sponge aquaculture. Marine and Freshwater Research, 58 (7). pp. 624-633.

Williams, A.J., Mapstone, B.D., and Davies, C.R. (2007) Spatial patterns in cohort-specific mortality of red throat emperor, Lethrinus miniatus, on the Great Barrier Reef. Fisheries Research, 84 (3). pp. 328-337.

Wiley, Tonya R., and Simpfendorfer, Colin A. (2007) The ecology of elasmobranchs occurring in the Everglades National Park, Florida: implications for conservation and management. Bulletin of Marine Science, 80 (1). pp. 171-189.

Jones, A., Slade, S.J., Williams, A.J., Mapstone, B.D., and Kane, K.J. (2007) Pitfalls and benefits of involving industry in fisheries research: a case study of the live reef fish industry in Queensland, Australia. Ocean & Coastal Management, 50 (5-6). pp. 428-442.

Arlinghaus, Robert, Cooke, Steven J., Lyman, Jon, Policansky, David, Schwab, Alexander, Suski, Cory, Sutton, Stephen G., and Thorstad, Eva B. (2007) Understanding the complexity of catch and release in recreational fishing: an integrative synthesis of global knowledge from historical, ethical social and biological perspectives. Reviews in Fisheries Science, 15 (1 & 2). pp. 75-167.

Sabetian, Armagan, and Foale, Simon (2006) Evolution of the artisanal fisher: case studies from Solomon Islands and Papua New Guinea. Traditional Marine Resource Management and Knowledge Information Bulletin, 20. pp. 3-10.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Consequences of inappropriate criteria for accepting age estimates from otoliths, with a case study for a long-lived tropical reef fish. Canadian Journal of Fisheries and Aquatic Sciences, 63 (10). pp. 2259-2274.

Marriott, Ross J., and Mapstone, Bruce D. (2006) Geographic influences on and the accuracy and precision of age estimates for the red bass, Lutjanus bohar (Forsskal 1775): a large tropical reef fish. Fisheries Research, 80 (2-3). pp. 322-328.

Choat, J.H., Davies, C.R., Ackerman, J.L., and Mapstone, B.D. (2006) Age structure and growth in a large teleost, Cheilinus undulatus, with a review of size distribution in labrid fishes. Marine Ecology Progress Series, 318. pp. 237-246.

Alcala, AngelC., and Russ, Garry R. (2006) No-take Marine Reserves and Reef Fisheries Management in the Philippines: a new people power revolution. Ambio, 35 (5). pp. 245-254.

Abesamis, Rene A., Alcala, Angel C., and Russ, Garry R. (2006) How much does the fishery at Apo Island benefit from spillover of adult fish from the adjacent marine reserve? Fishery Bulletin, 104 (3). pp. 360-375.

Abesamis, Rene, Russ, Garry, and Alcala, Angel (2006) Gradients of abundance of fish across no-take marine reserve boundaries: evidence from Philippine coral reefs. Aquatic Conservation: marine and freshwater ecosystems , 16 (4). pp. 349-371.

Ballagh, Aaron C., Begg, Gavin A., Mapleston, Amos, and Tobin, Andrew (2006) Growth trends of Queensland east coast Spanish mackerel (Scomberomorus commerson) from otolith back-calculations. Marine and Freshwater Research, 57 (4). pp. 383-393.

Williams, A.J., Davies, C.R., and Mapstone, B.D. (2006) Regional patterns in reproductive biology of Lethrinus miniatus on the Great Barrier Reef. Marine and Freshwater Research, 57 (4). pp. 403-414.

Heupel, Michelle R., Simpfendorfer, Colin A., Collins, Angela B., and Tyminski, John P. (2006) Residency and movement patterns of bonnethead sharks, Sphyrna tiburo, in a large Florida estuary. Environmental Biology of Fishes, 76. pp. 47-67.

McAuley, Rory B., Simpfendorfer, Colin A., Hyndes, Glenn .A., Allison, Rick R., Chidlow, Justin A., Newman, Stephen J., and Lenanton, Rod C.J. (2006) Validated age and growth of the sandbar shark, Carcharhinus plumbeus (Nardo, 1827) in the waters of Western Australia. Environmental Biology of Fishes, 77. pp. 385-400.

Abesamis, Rene A., and Russ, Garry R. (2005) Density-dependent spillover from a marine reserve: long-term evidence. Ecological Applications, 15 (5). pp. 1798-1812.

Keeney, D.B., Heupel, M.R., Hueter, R.E., and Heist, E.J. (2005) Microsatellite and mitochondrial DNA analyses of the genetic structure of blacktip shark (Carcharhinus limbatus) nurseries in the northwestern Atlantic, Gulf of Mexico and Caribbean Sea. Molecular Ecology, 14 (7). pp. 1911-1923.

Russ, Garry R., Stockwell, Brian, and Alcala, Angel C. (2005) Inferring versus measuring rates of recovery in no-take marine reserves. Marine Ecology Progress Series, 292. pp. 1-12.

Bergenius, Mikaela A.J., Mapstone, Bruce D., Begg, Gavin A., and Murchie, Cameron D. (2005) The use of otolith chemistry to determine stock structure of three epinepheline serranid coral reef fishes on the Great Barrier Reef, Australia. Fisheries Research, 72 (2-3). pp. 253-270.

Begg, Gavin A., Mapstone, Bruce D., Williams, Ashley J., Adams, Samantha, Davies, Campbell R., and Lou, Dong C. (2005) Multivariate life-history indices of exploited coral reef fish populations used to measure the performance of no-take zones in a marine protected area. Canadian Journal of Fisheries and Aquatic Sciences, 62 (3). pp. 679-692.

Graham, N.A.J., Dulvy, N.K., Jennings, S., and Polunin, N.V.C. (2005) Size spectra as indicators of fishing effects on coral reef fish assemblages. Coral Reefs, 24 (1). pp. 118-124.

Lou, Dong C., Mapstone, Bruce D., Russ, Garry R., Davies, Campbell R., and Begg, Gavin A. (2005) Using otolith weight-age relationships to predict age-based metrics of coral reef fish populations at different spatial scales. Fisheries Research, 71 (3). pp. 279-294.

Alcala, Angel C., Russ, Garry R., Maypa, Aileen P., and Calumpong, Hilconida C. (2005) A long-term, spatially replicated experimental test of the effect of marine reserves on local fish yields. Canadian Journal of Fisheries and Aquatic Sciences, 62 (1). pp. 98-108.

Perna, Colton, and Burrows, Damien (2005) Improved dissolved oxygen status following removal of exotic weed mats in important fish habitat lagoons of the tropical Burdekin River floodplain, Australia. Marine Pollution Bulletin, 51 (1). pp. 138-148.

Burgess, George H., Beerkircher, Lawrence R., Cailliet, Gregor M., Carlson, John K., Cortes, Enric, Goldman, Kenneth J., Grubbs, R. Dean, Musick, John A., Musyl, Michael K., and Simpfendorfer, Colin A. (2005) Is the collapse of shark populations in the Northwest Atlantic Ocean and Gulf of Mexico real? Fisheries, 30 (10). pp. 19-26.

Begg, Gavin A., Campana, Steven E., Fowler, Anthony J., and Suthers, Iain M. (2005) Otolith research and application: current directions in innovation and implementation. Marine and Freshwater Research, 56 (5). pp. 477-483.

Cinner, Joshua (2005) Socioeconomic factors influencing customary marine tenure in the Indo-Pacific. Ecology and Society, 10 (1). pp. 1-14.

Heupel, Michelle R., Simpfendorfer, Colin A., and Hueter, Robert E. (2004) Estimation of shark home ranges using passive monitoring techniques. Environmental Biology of Fishes, 71 (2). pp. 135-142.

Davis, K.L.F., Russ, G.R., Williamson, D.H., and Evans, R.D. (2004) Surveillance and poaching on inshore reefs of the Great Barrier Reef Marine Park. Coastal Management, 32 (4). pp. 373-387.

Williamson, D.H., Russ, G.R., and Ayling, A.M. (2004) No-take marine reserves increase abundance and biomass of reef fish on inshore fringing reefs of the Great Barrier Reef. Environmental Conservation, 31 (2). pp. 149-159.

Russ, Garry R., Alcala, Angel C., Maypa, Aileen P., Calumpong, Hilconida P., and White, Alan T. (2004) Marine reserve benefits local fisheries. Ecological Applications, 14 (2). pp. 597-606.

Dulvy, N.K, Polunin, N.V.C., Mill, A.C., and Graham, N.A.J. (2004) Size structural change in lightly exploited coral reef fish communities: evidence for weak indirect effects. Canadian Journal of Fisheries and Aquatic Sciences, 61 (3). pp. 446-475.

Russ, Garry R., and Alcala, Angel C. (2004) Marine reserves: long-term protection is required for full recovery of predatory fish populations. Oecologia, 138 (4). pp. 622-627.

Evans, R.D., and Russ, G.R. (2004) Larger biomass of targeted reef fish in the no-take marine reserves on the Great Barrier Reef, Australia. Aquatic Conservation: marine and freshwater ecosystems , 14 (5). pp. 505-519.

Hueter, R.E., Heupel, M.R., Heist, E.J., and Keeney, D.B. (2004) The implications of philopatry in sharks for the management of shark fisheries. Journal of Northwest Atlantic Fishery Science , 35. pp. 239-247.

Keeney, D.B., Heupel, M.R., Hueter, R.E., and Heist, E.J. (2003) Genetic evidence of stock structure among blacktip shark, Carcharhinus limbatus, continental nurseries along the U.S. Atlantic and Gulf of Mexico. Marine Biology, 143 (6). pp. 1039-1046.

McAuley, Rory B., and Simpfendorfer, Colin A. (2003) Catch composition of Western Australia’s temperate demersal gillnet and demersal longline fisheries, 1994 to 1999. Western Australian Fisheries Research Reports, 146. pp. 1-84.

Heupel, M.R., Simpfendorfer, C.A., and Hueter, R.E. (2003) Running before the storm: blacktip sharks respond to falling barometric pressure associated with Tropical Storm Gabrielle. Journal of Fish Biology, 63 (5). pp. 1357-1363.

Thompson, A.A., and Mapstone, B.D. (2002) Intra- versus inter-annual variation in counts of reef fishes and interpretations of long-term monitoring studies. Marine Ecology Progress Series, 232. pp. 247-257.

Maypa, A.P., Russ, G.R., Alcala, A.C., and Calumpong, H.P. (2002) Long-term trends in yield and catch rates of the coral reef fishery at Apo Island, central Philippines. Marine and Freshwater Research, 53 (2). pp. 207-213.

Alcala, A.C., and Russ, G.R. (2002) Status of Philippine coral reef fisheries. Asian Fisheries Science, 15 (2). pp. 177-192.

Jones, Clive M., and Derbyshire, Kurt (1988) Sampling the demersal fauna from a commercial penaeid prawn fishery off the central Queensland coast. Memoirs of the Queensland Museum, 25 (2). pp. 403-415.

Book Chapter

Kyne, Peter M., and Simpfendorfer, Colin A. (2010) Deepwater Chondrichthyans. In: Carrier, Jeffery C., Musick, John A., and Heithaus, Michael R., (eds.) Sharks and their Relatives II: Biodiversity, Adaptive Physiology, and Conservation. CRC Marine Biology Series . CRC Press, Taylor and Francis Group, Boca Raton, Florida, USA, pp. 37-113.

Heupel, Michelle (2007) Exiting Terra Ceia Bay: examination of cues stimulating migration from a summer nursery area. In: McCandless, Camilla T., Kohler, Nancy E., and Pratt Jr., Harold L., (eds.) Shark Nursery Grounds of the Gulf of Mexico and the East Coast Waters of the United States. American Fisheries Society, Bethesda MD, pp. 265-280.

Simpfendorfer, Colin A. (2005) Demographic Models: life tables, matrix models and rebound potential. In: Musick, John A., and Bonfil, Ramon, (eds.) Management Techniques for Elasmobranch Fisheries. FAO Fisheries Technical Paper (474). Food and Agriculture Organization of the United Nations, Rome, Italy, pp. 143-153.

Simpfendorfer, Colin A., Bonfil, Ramon, and Latour, Robert J. (2005) Mortality estimation. In: Musick, John A., and Bonfil, Ramon, (eds.) Management Techniques for Elasmobranch Fisheries. FAO Fisheries Technical Paper (474). Food and Agriculture Organization of the United Nations, Rome, Italy, pp. 165-185.

Begg, Gavin A. (2004) Life history parameters. In: Cadrin, Stephen X., Friedland, Kevin D., and Waldman, John R., (eds.) Stock Identification Methods: applications in fishery science. Elsevier, Burlington, MA, USA, pp. 119-150.

Report

Welch, D.J., Ovenden, J., Simpfendorfer, C., Tobin, A., Morgan, J.A.T., Street, R., White, J., Harry, A., Schroeder, R., and Macbeth, W.G. (2011) Stock structure of exploited shark species in north-eastern Australia. Report to the Fisheries Research & Development Corporation, Project 2007/035. Fishing & Fisheries Research Centre Technical Report No. 12. Report. Fisheries Research and Development Corporation, James Cook University, Townsville, QLD, Australia.

Welch, D.J., Buckworth, R.C., Ovenden, J.R., Newman, S.J., Broderick, D., Lester, R.J.G., Ballagh, A.C., Stapley, J., Charters, R.A., and Gribble, N.A. (2009) Determination of management units for grey mackerel fisheries in northern Australia. Report. James Cook University, Townsville, Queensland, Australia.

Brown, I.W., Sumpton, W.D., McLennan, M., Welch, D.J., Kirkwood, J., Butcher, A., Mapleston, A., Mayer, D., Begg, G., Campbell, M., Halliday, I., and Sawynok, W. (2008) National Strategy for the Survival of Released Line-Caught Fish: tropical reef species (FRDC 2003/019). Report. Department of Primary Industries and Fisheries.

Heupel, M.R., Williams, A.J., Welch, D.J., Mapstone, B.D., Ballagh, A., and Simpfendorfer, C.A. (2008) Compilation of information on the interaction of reef sharks with the reef line fishery in the Great Barrier Reef Marine Park: final report to the Great Barrier Reef Marine Park Authority. Report. Great Barrier Reef Marine Park Authority, Townsville, QLD, Australia.

Little, L. Rich, Begg, Gavin A., Goldman, Barry, Ellis, Nick, Mapstone, Bruce D., Punt, André E., Jones, Annabel, Sutton, Steve, and Williams, Ashley (2008) Modelling Multi-Species Targeting of Fishing Effort in the Queensland Coral Reef Fin Fish Fishery. Report. James Cook University Fishing & Fisheries Research Centre, Townsville, QLD, Australia.

Conference Item

Heupel, Michelle R., and Webber, Dale M. (2012) Trends in acoustic tracking: where are the fish going and how will we follow them? In: American Fisheries Society Symposium (76), pp. 219-231. From: American Fisheries Society Symposium 76: advances in fish tagging and marketing technology, 24-28 February 2008, Auckland, NZL.

Stieglitz, T., Chauvaud, L., Amice, E., Thebault, J., Peel, J., Aldana-Aranda, D., and Enriquez Diaz, M. (2011) Habitat usage of a groundwater-fed coastal inlet by the iconic and endangered queen conch Strombus gigas, Yucatan Peninsula, Mexico. In: Abstracts from 25th International Union of Geodesy and Geophysics General Assembly, p. 1. From: IUGG 2011 25th International Union of Geodesy and Geophysics General Assembly, 28 June - 7 July 2011, Melbourne, VIC, Australia.

Thesis

Knip, Danielle Melissa (2011) Spatial ecology of mobile predators in a nearshore tropical environment and its implication for marine protected areas. PhD thesis, James Cook University.

Harry, Alastair Varley (2011) Life histories of commercially important tropical sharks from the Great Barrier Reef World Heritage Area. PhD thesis, James Cook University.

Balston, Jacqueline Marie (2007) An examination of the impacts of climate variability and climate change on the wild barramundi (Lates calcarifer): a tropical estuarine fishery of north-eastern Queensland, Australia. PhD thesis, James Cook University.

Bergenius, Mikaela A.J. (2007) Stock structure of a coral reef fish, Plectropomus leopardus: identification and implications for harvest strategy evaluation. PhD thesis, James Cook University.

Eagle, Janelle Vinita (2006) Recruitment hotspots around a coral reef: the roles of hydrodynamics and habitats. PhD thesis, James Cook University.

Tobin, Renae C. (2006) The effectiveness of recreational only fishing areas in North Queensland estuaries for reducing conflict and improving recreational catches. PhD thesis, James Cook University.

Pears, Rachel J. (2005) Comparative demography and assemblage structure of serranid fishes: implications for conservation and fisheries management. PhD thesis, James Cook University.

Marriott, Ross James (2005) Population biology, dynamics and their implications for management of red bass: a large, long-lived reef fish. PhD thesis, James Cook University.

Abesamis, Rene A. (2005) Patterns and mechanisms of spillover from marine reserves. Masters (Research) thesis, James Cook University.

Phelan, Michael John (2005) Indigenous subsistence fishing at Injinoo Aboriginal Community, northern Cape York Peninsula. Masters (Research) thesis, James Cook University.

Kwan, Donna (2002) Towards a sustainable indigenous fishery for dugongs in Torres Strait : a contribution of empirical data analysis and process. PhD thesis, James Cook University.

This list was generated on Thu Apr 24 17:46:22 2014 EST.