Article

Jeanne, Nicolas, Saliou, Adrien, Carcenac, Romain, Lefebvre, Caroline, Dubois, Martine, Cazabat, Michelle, Nicot, Florence, Loiseau, Claire, Raymond, Stéphanie, Izopet, Jacques, and Delobel, Pierre (2015) Position-specific automated processing of V3 env ultra-deep pyrosequencing data for predicting HIV-1 tropism. Scientific Reports, 5. 16944. pp. 1-10.

Smout, Michael J., Sotillo, Javier, Laha, Thewarach, Papatpremsiri, Atiroch, Rinaldi, Gabriel, Pimenta, Rafael N., Chan, Lai Yue, Johnson, Michael S., Turnbull, Lynne, Whitchurch, Cynthia B., Giacomin, Paul R., Moran, Corey S., Golledge, Jonathan, Daly, Norelle, Sripa, Banchob, Mulvenna, Jason P., Brindley, Paul J., and Loukas, Alex (2015) Carcinogenic parasite secretes growth factor that accelerates wound healing and potentially promotes neoplasia. PLoS Pathogens, 11 (10). e100520. pp. 1-20.

Giacomin, Paul R., Moy, Ryan H., Noti, Mario, Osborne, Lisa C., Siracusa, Mark C., Alenghat, Theresa, Liu, Bigang, McCorkell, Kelly A., Troy, Amy E., Rak, Gregory D., Hu, Yinling, May, Michael J., Ma, Hak-Ling, Fouser, Lynette A., Sonnenberg, Gregory F., and Artis, David (2015) Epithelial-intrinsic IKKα expression regulates group 3 innate lymphoid cell responses and antibacterial immunity. The Journal of Experimental Medicine, 212 (10). pp. 1513-1528.

Rinaldi, Gabriel, Yan, Hongbin, Nacif-Pimenta, Rafael, Matchimakul, Pitchaya, Bridger, Joanna, Mann, Victoria H., Smout, Michael J., Brindley, Paul J., and Knight, Matty (2015) Cytometric analysis, genetic manipulation and antibiotic selection of the snail embryonic cell line Bge from Biomphalaria glabrata, the intermediate host of Schistosoma mansoni. International Journal for Parasitology, 45 (8). pp. 527-535.

Williams, Natasha L., Morris, Jodie L., Rush, Catherine M., and Ketheesan, Natkunam (2015) Plasmacytoid dendritic cell bactericidal activity against Burkholderia pseudomallei. Microbes and Infection, 17 (4). pp. 311-316.

Walker, Robert A., Sharman, Philippa A., Miller, Catherine M., Lippuner, Christoph, Okoniewski, Michal, Eichenberger, Ramon M., Ramakrishnan, Chandra, Brossier, Fabien, Deplazes, Peter, Hehl, Adrian B., and Smith, Nicholas C. (2015) RNA Seq analysis of the Eimeria tenella gametocyte transcriptome reveals clues about the molecular basis for sexual reproduction and oocyst biogenesis. BMC Genomics, 16. 94. pp. 1-20.

Hehl, Adrian B., Basso, Walter U., Lippuner, Christoph, Ramakrishnan, Chandra , Okoniewski, Michal, Walker, Robert A., Grigg, Michael E., Smith, Nicholas C., and Deplazes, Peter (2015) Asexual expansion of Toxoplasma gondii merozoites is distinct from tachyzoites and entails expression of non-overlapping gene families to attach, invade, and replicate within feline enterocytes. BMC Genomics, 16. 66. pp. 1-16.

Helmstetter, Caroline, Flossdorf, Michael, Peine, Michael, Kupz, Andreas, Zhu, Jinfang, Hegazy, Ahmed N., Duque-Correa, Maria A., Zhang, Qin, Vainshtein, Yevhen, Radbruch, Andreas, Kaufmann, Stefan H., Paul, William E., Hofer, Thomas, and Lohning, Max (2015) Individual T helper cells have a quantitative cytokine memory. Immunity, 42 (1). pp. 108-122.

Karl, Stephan, Mueller, Ivo, and St Pierre, Timothy G. (2015) Considerations regarding the micromagnetic resonance relaxometry technique for rapid label-free malaria diagnosis. Nature Medicine, 21 (12). p. 1387.

Bridson, Tahnee, Matthiesson, Anthony, Owens, Leigh, Govan, Brenda, Norton, Robert, and Ketheesan, Natkunam (2015) Diabetes: a contributor to tuberculosis in tropical Australia. American Journal of Tropical Medicine and Hygiene, 93 (3). pp. 547-548.

Candido, Renata R.F., Favero, Vivian, Duke, Mary, Karl, Stephan, Gutiérrez, Lucía, Woodward, Robert C., Graeff-Teixeira, Carlos, Jones, Malcolm K., and St. Pierre, Timothy G. (2015) The affinity of magnetic microspheres for Schistosoma eggs. International Journal for Parasitology, 45 (1). pp. 43-50.

Haapkylä , J., Melbourne-Thomas, J., and Flavell, M. (2015) The association between coral communities and disease assemblages in the Wakatobi Marine National Park, south-eastern Sulawesi, Indonesia. Marine and Freshwater Research, 66 (10). pp. 948-955.

Witcombe, David M., and Smith, Nicholas C. (2014) Strategies for anti-coccidial prophylaxis. Parasitology, 141 (11). pp. 1379-1389.

Smout, Michael (2014) Understanding the causes of bile duct liver cancer. Voices, 5 June 2014.

Sawant, Deepali V., Gravano, David M., Vogel, Peter, Giacomin, Paul, Artis, David, and Vignali, Dario A.A. (2014) Regulatory T cells limit induction of protective immunity and promote immune pathology following intestinal helminth infection. Journal of Immunology, 192 (6). pp. 2904-2912.

Strugnell, Richard A., Scott, Timothy A., Wang, Nancy, Yang, Chenying, Peres, Newton, Bedoui, Sammy, and Kupz, Andreas (2014) Salmonella vaccines: lessons from the mouse model or bad teaching? Current Opinion in Microbiology, 17. pp. 99-105.

Posada, Ana C., Kolar, Stacey L., Dusi, Renata G., Francois, Patrice, Roberts, Alexandra A., Hamilton, Chris J., Liu, George Y., and Cheung, Ambrose (2014) Importance of bacillithiol in the oxidative stress response of Staphylococcus aureus. Infection and Immunity, 82 (1). pp. 316-332.

Kupz, Andreas, Bedoui, Sammy, and Strugnell, Richard A. (2014) Cellular requirements for systemic control of Salmonella enterica serovar Typhimurium infections in mice. Infection and Immunity, 82 (12). pp. 4997-5004.

Meddings, Jonathan Ian, Owens, Leigh, Burgess, Graham, and Ariel, Ellen (2014) Revelations in reptilian and avian immunology: a proposed evolutionary selection pressure for truncated immunoglobulin-Y. International Journal of Immunological Studies, 2 (1). pp. 29-41.

Cerqueira, Gustavo M., Kostoulias, Xenia, Khoo, Chen, Aibinu, Ibukun, Qu, Yue, Traven, Ana, and Peleg, Anton Y. (2014) A global virulence regulator in Acinetobacter baumannii and its control of the phenylacetic acid catabolic pathway. Journal of Infectious Diseases, 210 (1). pp. 46-55.

Walker, Robert A., Ferguson, David J.P., Miller, Catherine M.D., and Smith, Nicholas C. (2013) Sex and Eimeria: a molecular perspective. Parasitology, 140 (14). pp. 1701-1717.

Delobel, P., Cazabat, M., Saliou, A., Loiseau, C., Coassin, L., Raymond, S., Requena, M., Marchou, B., Massip, P., and Izopet, J. (2013) Primary resistance of CCR5-tropic HIV-1 to maraviroc cannot be predicted by the V3 sequence. Journal of Antimicrobial Chemotherapy, 68 (11). pp. 2506-2514.

Kupz, Andreas, Fischer, André, Nies, Dietrich H., Grass, Gregor, Göbel, Ulf B., Bereswill, Stefan, and Heimesaat, Markus M. (2013) Impact of metal ion homeostasis of genetically modified Escherichia coli Nissle 1917 and K12 (W3110) strains on colonization properties in the murine intestinal tract. European Journal of Microbiology and Immunology, 3 (3). pp. 229-235.

Dantas-Torres, Filipe, Capelli, Gioia, Giannelli, Alessio, Ramos, Rafael Antonio Nascimento, Lia, Riccardo Paolo, Cantacessi, Cinzia, de Caprariis, Donato, De Tommasi, Anna Sara, Latrofa, Maria Stefania, Lacasella, Vita, Tarallo, Viviana Domenica, Di Paola, Giancarlo, Qurollo, Barbara, Breitschwerdt, Edward, Stanneck, Dorothee, and Otranto, Domenico (2013) Efficacy of an imidacloprid/flumethrin collar against fleas, ticks and tick-borne pathogens in dogs. Parasites & Vectors, 6. 245. pp. 1-8.

Gissot, Mathieu, Walker, Robert, Delhaye, Stephane, Alayi, Tchilabalo Dilezitoko, Huot, Ludovic, Hot, David, Callebaut, Isabelle, Schaeffer-Reiss, Christine, Van Dorsseaer, Alain , and Tomavo, Stanislas (2013) Toxoplasma gondii Alba proteins are involved in translational control of gene expression. Journal of Molecular Biology, 425 (8). pp. 1287-1301.

Abbott, Iain, Cerqueira, Gustavo M., Bhuiyan, Saruar, and Peleg, Anton Y. (2013) Carbapenem resistance in Acinetobacter baumannii: laboratory challenges, mechanistic insights and therapeutic strategies. Expert Review of Anti-infective Therapy, 11 (4). pp. 395-409.

Chatfield, Matthew W.H., Brannelly, Laura A., Robak, Matthew J., Freeborn, Layla, Lailvaux, Simon P., and Richards-Zawacki, Corinne L. (2013) Fitness consequences of infection by Batrachochytrium dendrobatidis in northern leopard frogs (Lithobates pipiens). EcoHealth, 10 (1). pp. 90-98.

Kosch, T.A., and Summers, K. (2013) Techniques for minimizing the effects of PCR inhibitors in the chytridiomycosis assay. Molecular Ecology Resources, 13 (2). pp. 230-236.

Kupz, Andreas, Scott, Timothy A., Belz, Gabrielle T., Andrews, Daniel M., Greyer, Marie, Lew, Andrew M., Brooks, Andrew G., Smyth, Mark J., Curtiss, Roy, Bedoui, Sammy, and Strugnell, Richard A. (2013) Contribution of Thy1+ NK cells to protective IFN-γ production during Salmonella Typhimurium infections. Proceedings of the National Academy of Sciences of the United States of America, 110 (6). pp. 2252-2257.

Hodgson, Kelly A., Govan, Brenda L., Walduck, Anna K., Ketheesan, Natkunam, and Morris, Jodie L. (2013) Impaired early cytokine responses at the site of infection in a murine model of type 2 diabetes and melioidosis comorbidity. Infection and Immunity, 81 (2). pp. 470-477.

Walker, Robert, Gissot, Mathieu, Croken, Matthew M., Huot, Ludovic, Hot, David, Kim, Kami, and Tomavo, Stanislas (2013) The Toxoplasma nuclear factor TgAP2XI-4 controls bradyzoite gene expression and cyst formation. Molecular Microbiology, 87 (3). pp. 641-655.

Rajkarnikar, Arishma, Strankman, Andrew, Duran, Shayla, Vargas, Derek, Roberts, Alexandra A., Barretto, Kathryn, Upton, Heather, Hamilton, Christopher J., and Rawat, Mamta (2013) Analysis of mutants disrupted in bacillithiol metabolism in Staphylococcus aureus. Biochemical and Biophysical Research Communications, 436 (2). pp. 128-133.

Cooper, A., Stephens, J., Ketheesan, N., and Govan, B. (2013) Detection of Coxiella burnetii DNA in wildlife and ticks in Northern Queensland, Australia. Vector-Borne and Zoonotic Diseases, 13 (1). pp. 12-16.

Adegboye, O.A., and Kotze, D. (2013) Epidemiological analysis of spatially misaligned data: a case of highly pathogenic avian influenza virus outbreak in Nigeria. Epidemiology and Infection, 142 (5). pp. 940-949.

Hapairai, Limb K., Joseph, Hayley, Sang, Michel A. Cheong , Melrose, Wayne, Ritchie, Scott A., Burkot, Thomas R., Sinkins, Steven P., and Bossin, Hervé C. (2013) Field evaluation of selected traps and lures for monitoring the filarial and arbovirus vector, Aedes polynesiensis (Diptera: Culicidae), in French Polynesia. Journal of Medical Entomology, 50 (4). pp. 731-739.

Koinari, M, Karl, S., Elliot, A., Ryan, U., and Lymbery, A.J. (2013) Identification of Anisakis species (Nematoda: Anisakidae) in marine fish hosts from Papua New Guinea. Veterinary Parasitology, 193 (1-3). pp. 126-133.

Koinari, M., Karl, S., Ng-Hublin, J., Lymbery, A.J., and Ryan, U.M. (2013) Identification of novel and zoonotic Cryptosporidium species in fish from Papua New Guinea. Veterinary Parasitology, 198 (1-2). pp. 1-9.

Koinari, M., Karl, S., Ryan, U., and Lymbery, A.J. (2013) Infection levels of gastrointestinal parasites in sheep and goats in Papua New Guinea. Journal of Helminthology, 87 (4). pp. 409-415.

Brudner, Matthew, Karpel, Marshall, Lear, Calli M, Chen, Li, Yantosca, Louis M, Scully, Corinne, Sarraju, Ashish, Sokolovska, Anna, Zariffard, M. Reza, Eisen, Damon, Mungall, Bruce A., Kotton, Darrell N., Omari, Amel, Huang, I-Chueh, Farzan, Michael, Takahashi, Kazue, Stuart, Lynda, Stahl, Gregory L., Ezekowitz, Alan B., Spear, Gregory T., Olinger, Gene G., Schmidt, Emmett V., and Michelow, Ian C. (2013) Lectin-dependent enhancement of Ebola virus infection via soluble and transmembrane C-type lectin receptors. PLoS ONE, 8 (4). e60838.

Saxena, Manvendra, Van, Thi Thu Hao, Baird, Fiona J., Coloe, Peter J., and Smooker, Peter M. (2013) Pre-existing immunity against vaccine vectors: friend or foe? Microbiology, 159 (1). pp. 1-11.

Walker, Robert, Gissor, Mathieu, Huot, Ludovic, Alayi, Tchilabalo Dilezitoko, Hot, David, Marot, Guillemette, Schaeffer-Reiss, Christine, Van Dorsselaer, Alain, Kim, Kami, and Tomavo, Stanislas (2013) Toxoplasma transcription factor TgAP2XI-5 regulates the expression of genes involved in parasite virulence and host invasion. Journal of Biological Chemistry, 288 (43). pp. 31127-31138.

Giacomin, Paul R., Siracusa, Mark C., Walsh, Kevin P., Grencis, Richard K., Kubo, Masato, Comeau, Michael R., and Artis, David (2012) Thymic stromal lymphopoietin-dependent basophils promote Th2 cytokine responses following intestinal helminth infection. Journal of Immunology, 189 (9). pp. 4371-4378.

Siregar, Tuti Hartati, Elliman, Jennifer, and Owens, Leigh (2012) Development of real time polymerase chain reaction for detection of Salmonella typhimurium and Salmonella enteritidis in fish. Squalen, 7 (2). pp. 51-58.

Rieux, Anaïs, Gras, Simon, Lecaille, Fabien, Niepceron, Alisson, Katrib, Marilyn, Smith, Nicholas C., Lalmanach, Gilles, and Brossier, Fabien (2012) Eimeripain, a cathepsin b-like cysteine protease, expressed throughout sporulation of the apicomplexan parasite Eimeria tenella. PLoS ONE, 7 (3). e31914. pp. 1-11.

Gissot, Mathieu, Walker, Robert, Delhaye, Stephane, Huot, Ludovic, Hot, David, and Tomavo, Stanislas (2012) Toxoplasma gondii chromodomain protein 1 binds to heterochromatin and colocalises with centromeres and telomeres at the nuclear periphery. PLoS ONE, 7 (3). e32671. pp. 1-10.

Morine, M., Yang, R., Ng, J., Kueh, S., Lymbery, A. J., and Ryan, U. M. (2012) Additional novel Cryptosporidium genotypes in ornamental fishes. Veterinary Parasitology, 190 (3-4). pp. 578-582.

Kosch, Tiffany A., Morales, Victor, and Summers, Kyle (2012) Batrachochytrium dendrobatidis in Peru. Herpetological Review, 43 (2). pp. 288-293.

Morris, Jodie, Williams, Natasha, Rush, Catherine, Govan, Brenda, Sangla, Kunwarjit, and Ketheesan, Natkunam (2012) Burkholderia pseudomallei triggers altered inflammatory profiles in a whole-blood model of type 2 diabetes-melioidosis comorbidity. Infection and Immunity, 80 (6). pp. 2089-2099.

Webb, Rebecca, Philips, Annie, Speare, Rick, Connolly, Joanne, and Berger, Lee (2012) Controlling wildlife fungal disease spread: in vitro efficacy of disinfectants against Batrachochytrium dendrobatidis and Mucor amphibiorum. Diseases of Aquatic Organisms, 99 (2). pp. 119-125.

Kupz, Andreas, Guarda, Greta, Gebhardt, Thomas, Sander, Leif E., Short, Kirsty R., Diavatopoulos, Dimitri A., Wijburg, Odilia L.C., Cao, Hanwei, Waithman, Jason C., Chen, Weisan, Fernandez-Ruiz, Daniel, Whitney, Paul G., Heath, William R., Curtis, Roy, Tschopp, Jürg, Strugnell, Richard A., and Bedoui, Sammy (2012) NLRC4 inflammasomes in dendritic cells regulate noncognate effector function by memory CD8⁺ T cells. Nature Immunology, 13 (2). pp. 162-169.

Skwarczynski, Mariusz, Dougall, Annette M., Khoshnejad, Makan, Chandrudu, Saranya, Pearson, Mark, Loukas, Alex, and Toth, Istvan (2012) Peptide-based subunit vaccine against hookworm infection. PLoS One, 7 (10). e46870. pp. 1-7.

Katrib, Marilyn, Ikin, Rowan J., Brossier, Fabien, Robinson, Michelle, Slapetova, Iveta, Sharman, Philippa A., Walker, Robert A., Belli, Sabina I., Tomley, Fiona M., and Smith, Nicholas C. (2012) Stage-specific expression of protease genes in the apicomplexan parasite, Eimeria tenella. BMC Genomics, 13 (685). pp. 1-18.

Peleg, Anton Y., de Breij, Anna, Adams, Mark D., Cerqueira, Gustavo M., Mocali, Stefano, Galardini, Marco, Nibbering, Peter H., Earl, Ashlee M., Ward, Doyle V., Paterson, David L., Seifert, Harald, and Dijkshoorn, Lenie (2012) The success of acinetobacter species; genetic, metabolic and virulence attributes. PLoS ONE, 7 (10). e46984. pp. 1-11.

Hodgson, Kelly A., Morris, Jodie L., Feterl, Marshall L., Govan, Brenda L., and Ketheesan, Natkunam (2011) Altered macrophage function is associated with severe Burkholderia pseudomallei infection in a murine model of type 2 diabetes. Microbes and Infection, 13 (14-15). pp. 1177-1184.

Cerqueira, Gustavo M., and Peleg, Anton Y. (2011) Insights into Acinetobacter baumannii pathogenicity. IUBMB Life, 63 (12). pp. 1055-1060.

Lourdault, Kristel, Cerqueira, Gustavo M., Wunder, Elsio A., and Picardeau, Mathieu (2011) Inactivation of clpB in the pathogen Leptospira interrogans reduces virulence and resistance to stress conditions. Infection and Immunity, 79 (9). pp. 3711-3717.

Islam, M. Khyrul, Jabbar, Abdul, Campbell, Bronwyn E., Cantacessi, Cinzia, and Gasser, Robin (2011) Bovine theileriosis: an emerging problem in south-eastern Australia? Infection, Genetics and Evolution, 11 (8). pp. 2095-2097.

Harris, Patrick N.A., Williams, Natasha L., Morris, Jodie L., Ketheesan, Natkunam, and Norton, Robert E. (2011) Evidence of Burkholderia pseudomallei-specific immunity in patient sera persistently nonreactive by the indirect hemagglutination assay. Clinical and Vaccine Immunology, 18 (8). pp. 1288-1291.

Garland, Stephen, Wood, John, and Skerratt, Lee F. (2011) A comparison of sensitivity between the real-time detection of a TaqMan® assay for Batrachochytrium dendrobatidis and conventional detection. Diseases of Aquatic Organisms, 94 (2). pp. 101-105.

Hartwig, Daiane D., Seixas, Fabiana K., Cerqueira, Gustavo M., McBride, Alan J.A., and Dellagostin, Odir A. (2011) Characterization of the immunogenic and antigenic potential of putative lipoproteins from Leptospira interrogans. Current Microbiology, 62 (4). pp. 1337-1341.

Williams, Natasha L., Morris, Jodie L., Rush, Catherine, Govan, Brenda L., and Ketheesan, Natkunam (2011) Impact of streptozotocin-induced diabetes on functional responses of dendritic cells and macrophages towards Burkholderia pseudomallei. FEMS Immunology & Medical Microbiology, 61 (2). pp. 218-227.

Constantinoiu, C.C., Molloy, J.B., Jorgensen, W.K., and Coleman, G.T. (2011) Characterization of the antibody response in birds following infection with wild-type and attenuated strains of Eimeria tenella and Eimeria necatrix. Veterinary Parasitology, 175 (1-2). pp. 47-51.

Cerqueira, Gustavo M., Souza, Natalie M., Araújo, Eduardo R., Barros, Aline T., Morais, Zenaide M., Vasconcellos, Sílvio A., and Nascimento, Ana L.T.O. (2011) Development of transcriptional fusions to assess Leptospira interrogans promoter activity. PLoS ONE, 6. e17409. pp. 1-16.

Gan, Emily, Baird, Fiona, Coloe, Peter J., Smooker, Peter M, and UNSPECIFIED (2011) Phenotypic and molecular characterization of Salmonella enterica serovar Sofia, an avirulent species in Australian poultry. Microbiology, 157 (4). pp. 1056-1065.

Karl, Stephan, Gutiérrez, Lucia, House, Michael J., Davis, Timothy M.E., and St Pierre, Tim G. (2011) Short report: Nuclear magnetic resonance: a tool for malaria diagnosis? American Journal of Tropical Medicine and Hygiene, 85 (5). pp. 815-817.

Miller, Catherine M., Boulter, Nicola R., Fuller, Stephen J., Zakrzewski, Alana M., Lees, Michael P., Saunders, Bernadette M., Wiley, James S., and Smith, Nicholas C. (2011) The role of the P2X7 receptor in infectious diseases. PLoS Pathogens, 7 (11). e1002212. pp. 1-7.

Karl, Stephan, Davis, Timothy M.E., and St Pierre, Tim G. (2011) short report quantification of Plasmodium falciparum gametocytes by magnetic fractionation. American Journal of Tropical Medicine and Hygiene, 84 (1). pp. 158-160.

Sharman, P.A., Smith, N.C., Wallach, M.G., and Katrib, M. (2010) Chasing the golden egg: vaccination against poultry coccidiosis. Parasite Immunology, 32 (8). pp. 590-598.

Eslabão, Marcus R., Dellagostin, Odir A., and Cerqueira, Gustavo M. (2010) LepBank: a Leptospira sequence repository and a portal for phylogenetic studies. Infection, Genetics and Evolution, 10 (4). pp. 586-590.

Bedoui, Sammy, Kupz, Andreas, Wijburg, Odilia L., Walduck, Anna K., Rescigno, Maria, and Strugnell, Richard A. (2010) Different bacterial pathogens, different strategies, yet the aim is the same: evasion of intestinal dendritic cell recognition. Journal of Immunology, 184 (5). pp. 2237-2242.

Parameswaran, N., Thompson, R.C.A., Sundar, N., Pan, S., Johnson, M., Smith, N.C., and Grigg, M.E. (2010) Nonarchetypal Type II-like and atypical strains of Toxoplasma gondii infecting marsupials of Australia. International Journal for Parasitology, 40 (6). pp. 635-640.

Cerqueira, Gustavo M., McBride, Alan J.A., Queiroz, Adriano, Pinto, Luciano S., Silva, Éverton F., Hartskeerl, Rudy A., Reis, Mitermayer G., Ko, Albert I., and Dellagostin, Odir A. (2010) Monitoring Leptospira strain collections: the need for quality control. American Journal of Tropical Medicine and Hygiene, 82 (1). pp. 83-87.

Walker, Robert A., Slapetova, Iveta, Slapeta, Jan, Miller, Catherine M., and Smith, Nicholas C. (2010) The glycosylation pathway of Eimeria tenella is upregulated during gametocyte development and may play a role in oocyst wall formation. Eukaryotic Cell, 9 (1). pp. 127-135.

Cerqueira, Gustavo M., McBride, Alan J.A., Hartskeerl, Rudy A., Ahmed, Nyiaz, Dellagostin, Odir A., Eslabão, Marcus R., and Nascimento, Ana L.T. (2010) Bioinformatics describes novel Loci for high resolution discrimination of leptospira isolates. PLoS ONE, 5. e15335. pp. 1-7.

Aviat, Florence, Slamti, Leyla, Cerqueira, Gustavo M., Lourdault, Kristel, and Picardeau, Mathieu (2010) Expanding the genetic toolbox for Leptospira species by generation of fluorescent bacteria. Applied and Environmental Microbiology, 76 (24). pp. 8135-8142.

da Silva, Everton F., Félix, Samuel R., Cerqueira, Gustavo M., Fagundes, Michel Q., Neto, Amilton C.P.S., Grassmann, André A., Amaral, Marta G., Gallina, Tiago, and Dellagostin, Odir (2010) Preliminary characterization of Mus musculus-derived pathogenic strains of Leptospira borgpetersenii serogroup Ballum in a hamster model. American Journal of Tropical Medicine and Hygiene, 83 (2). pp. 336-337.

Seixas, Fabiana K., Borsuk, Sibele, Fagundes, Michel Q., Hartwig, Daiane D., da Silva, Everton F., Cerqueira, Gustavo M., and Dellagostin, Odir A. (2010) Stable expression of Leptospira interrogans antigens in auxotrophic Mycobacterium bovis BCG. Biological Research, 43 (1). pp. 13-18.

Cerqueira, Gustavo M., McBride, Alan J.A., Picardeau, Mathieu, Ribeiro, Samuel G., Moreira, Ângela N., Morel, Viviane, Reis, Mitermayer G., Ko, Albert I., and Dellagostin, Odir A. (2009) Distribution of the leptospiral immunoglobulin-like (lig) genes in pathogenic Leptospira species and application of ligB to typing leptospiral isolates. Journal of Medical Microbiology, 58. pp. 1173-1181.

Cerqueira, Gustavo M., and Picardeau, Mathieu (2009) A century of Leptospira strain typing. Infection, Genetics and Evolution, 9 (5). pp. 760-768.

Belli, Sabina I., Ferguson, David J.P., Katrib, Marilyn, Slapetova, Iveta, Mai, Kelly, Slapeta, Jan, Flowers, Sarah A., Miska, Kate B., Tomly, Fiona M., Shirley, Martin W., Wallach, Michael G., and Smith, Nicholas C. (2009) Conservation of proteins involved in oocyst wall formation in Eimeria maxima, Eimeria tenella and Eimeria acervulina. International Journal for Parasitology, 39 (10). pp. 1063-1070.

Cerqueira, G., Silva, E., Seixas, F., Athanazio, D., Amaral, M., Vasconcelos, F., Hartwig, D., Ribeiro, S., and Dellagostin, O. (2009) Use of naked DNA immunization for screening of leptospiral antigens as potential vaccinogens. International Journal of Antimicrobial Agents, 34 (Supplement 2). P162. S78 - S78.

Carfarchia, Claudia, Otranto, Domenico, Weigl, Stephania, Campbell, Bronwyn E., Parisi, Antonio, Cantacessi, Cinzia, Mancianti, Francesca , Danesi, Patrizia , and Gasser, Robin B. (2009) Molecular characterization of selected dermatophytes and their identification by electrophoretic mutation scanning. Electrophoresis, 30 (20). pp. 3555-3564.

Silva, Éverton F., Cerqueira, Gustavo M., Seyffert, Núbia, Seixas, Fabiana K., Hartwig, Daiane D., Athanazio, Daniel A., Pinto, Luciano S., Queiroz, Adriano, Ko, Albert I., Brod, Claudiomar S., and Dellagostin, Odir A. (2009) Leptospira noguchii and human and animal leptospirosis, Southern Brazil. Emerging Infectious Diseases, 15 (4). pp. 621-623.

McBride, Alan, Cerqueira, Gustavo, Suchard, Mark, Moreira, Angela, Zuerner, Richard, Reis, Mitermayer, Haake, David, Ko, Albert, and Dellagostin, Odir (2009) Genetic diversity of the Leptospiral immunoglobulin-like (Lig) genes in pathogenic Leptospira spp. Infection, Genetics and Evolution, 9. pp. 196-205.

Mai, Kelly, Sharman, Philippa A., Walker, Robert A., Katrib, Marilyn, De Souza, David, McConville, Malcolm J., Wallach, Michael G., Belli , Sabina I., Ferguson, David J.P., and Smith, Nicholas C. (2009) Oocyst wall formation and composition in coccidian parasites. Memorias do Instituto Oswaldo Cruz , 104 (2). pp. 281-289.

Cantacessi, C., Loukas, A., Campbell, B.E., Mulvenna, J., Ong, E.K., Zhong, W., Sternberg, P.W., Otranto, D., and Gasser, R.B. (2009) Exploring transcriptional conservation between Ancylostoma caninum and Haemonchus contortus by oligonucleotide microarray and bioinformatic analyses. Molecular and Cellular Probes, 23 (1). pp. 1-9.

Pissuwan, Dakrong, Valenzuela, Stella M., Miller, Catherine M., and Cortie, Michael B. (2009) Destruction and control of Toxoplasmagondii Tachyzoites using gold nanosphere/antibody conjugates. Small, 5 (9). pp. 1030-1034.

Murray, Gerald L., Morel, Viviane, Cerqueira, Gustavo M., Croda, Julio, Srikram, Amporn, Henry, Rebekah, Ko, Albert I., Dellagostin, Odir A., Bulach, Dieter M., Sermswan, Rasana W., Adler, Ben, and Picardeau, Mathieu (2009) Genome-wide transposon mutagenesis in pathogenic Leptospira species. Infection and Immunity, 77 (2). pp. 810-816.

Sanchez-Morgado, Jose M., Gallagher, Alec, and Johnson, Linda K. (2009) Mycobacterium gordonae infection in a colony of African clawed frogs (Xenopus tropicalis). Laboratory Animals, 43 (3). pp. 300-303.

Otranto, Domenico, Cantacessi, Cinzia, Santantonio, Marilina, and Rizzo, Giovanni (2009) Oestrus ovis causing human ocular myiasis: from countryside to town centre. Clinical and Experimental Ophthalmology, 37 (3). pp. 327-328.

Silva, Éverton F., Seyffert, Núbia, Cerqueira, Gustavo M., Leihs, Karl P., Athanazio, Daniel A., Valente, Ana L.S., Dellagostin, Odir A., and Brod, Claudiomar S. (2009) Serum antileptospiral agglutinins in freshwater turtles from Southern Brazil. Brazilian Journal of Microbiology, 40. pp. 227-230.

Cheriyan, Vino T., Krishna, Smriti M., Kumar, Aswin, Jayaprakash, Puthuveetil Govindan, and Balaram, Prabha (2009) Signaling defects and functional impairment in T-cells from cervical cancer patients. Cancer Biotherapy and Radiopharmaceuticals, 24 (6). pp. 667-673.

Kim, Kiho, Page, Cathie A., and Harvell, C. Drew (2009) The role of environment and microorganisms in diseases of corals: overview of DAO Special 5. Diseases of Aquatic Organisms, 87 (1-2). pp. 1-3.

Wallach, Michael G., Ashash, Udi, Amnon, Michael, and Smith, Nicholas C. (2008) Field application of a subunit vaccine against an enteric protozoan disease. PLoS ONE, 13 (12). e3948. pp. 1-7.

Giacomin, P.R., Cava, M., Tumes, D.J., Gauld, A.D., Iddawela, D., McColl, S.R., Parsons, J.C., Gordon, D.L., and Dent, L.A. (2008) Toxocara canis larval excretory/secretory proteins impair eosinophil-dependent resistance of mice to Nippostrongylus brasiliensis. Parasite Immunology, 30 (8). pp. 435-445.

Silva, Everton F., Santos, Cleiton S., Athanazio, Daniel, Seyffert, Núbia, Seixas, Fabiana K., Cerqueira, Gustavo M., Fagundes, Michel Q., Brod, Claudiomar S., Reis, Mitermayer G., Dellagostin, Odir A., and Ko, Albert I. (2008) Characterization of virulence of Leptospira isolates in a hamster model. Vaccine, 26 (31). pp. 3892-3896.

Johnson, L. K., Liebana, E., Nunez, A., Spencer, Y., Clifton-Hadley, R., Jahans, K., Ward, A., Barlow, A., and Delahay, R. (2008) Histological observations of bovine tuberculosis in lung and lymph node tissues from British deer. The Veterinary Journal, 175 (3). pp. 409-412.

Huang, Cui-Qin, Gasser, Robin B., Cantacessi, Cinzia, Nisbet, Alaisdar J., Zhong, Weiwei, Sternberg, Paul W., Loukas, Alex, Mulvenna, Jason, Lin, Rui-Qing, Chen, Ning, and Zhu, Xing-Quan (2008) Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode Ascaris suum. PLoS Neglected Tropical Diseases, 2 (6). e246. pp. 1-12.

Mendez, Diana, Webb, Rebecca, Berger, Lee, and Speare, Richard (2008) Survival of the amphibian chytrid fungus Batrachochytrium dendrobatidis on bare hands and gloves: hygiene implications for amphibian handling. Diseases of Aquatic Organisms, 82 (2). pp. 97-104.

Seixas, Fabiana Kömmling, Silva , Éverton Fagonde, Hartwig, Daiane Drawanz, Cerqueira, Gustavo Maia, Amaral, Marta, Fagundes, Michel Quevedo, Dossa, Robson Grando, and Dellagostin, Odir Antônio (2007) Recombinant Mycobacterium bovis BCG expressing the LipL32 antigen of Leptospira interrogans protects hamsters from challenge. Vaccine, 26 (1). pp. 88-95.

Barton, Diane P. (2007) Pentastomid parasites of the introduced Asian house gecko, Hemidactylus frenatus (Gekkonidae), in Australia. Comparative Parasitology, 74 (2). pp. 254-259.

Silva, Éverton F., Brod, Claudiomar S., Cerqueira, Gustavo M., Bourscheidt, Débora, Seyffert, Núbia, Queiroz, Adriano, Santos, Cleiton S., Ko, Albert I., and Dellagostin, Odir A. (2007) Isolation of Leptospira noguchii from sheep. Veterinary Microbiology, 121 (1-2). pp. 144-149.

Reeve, David, Melrose, Wayne, Smith, Jan, and Elliman, Jennifer (2007) Evaluation of whole blood collection methods using the og4c3 ELISA in bancroftian filariasis. American Journal of Tropical Medicine and Hygiene, 77 (5 (suppl)). p. 222.

Heimesaat, Markus M., Fischer, André, Siegmund, Britta, Kupz, Andreas, Niebergall, Julia, Fuchs, David, Jahn, Hannah-Katharina, Freudenberg, Marina, Loddenkemper, Christoph, Batra, Arvind, Lehr, Hans-Anton, Liesenfeld, Oliver, Blaut, Michael, Göbel, Ulf B., Schumann, Ralf R., and Bereswill, Stefan (2007) Shift towards pro-inflammatory intestinal bacteria aggravates acute murine colitis via toll-like receptors 2 and 4. PLoS ONE, 2 (7). e662. pp. 1-7.

Gilmore, Glenda, Barnes, Jodie, Ketheesan, Natkunam, and Norton, Robert (2007) Use of antigens derived from Burkholderia pseudomallei, B. thailandensis, and B. cepacia in the indirect hemagglutination assay for melioidosis. Clinical and Vaccine Immunology, 14 (11). pp. 1529-1531.

Krishna, Smriti M., James, Susan, and Balaram, Prabha (2006) Expression of VEGF as prognosticator in primary nasopharyngeal cancer and its relation to EBV status. Virus Research, 115 (1). pp. 85-90.

Giacomin, Paul R., Wang, Hui, Gordon, David L., Botto, Marina, and Dent, Lindsay A. (2005) Loss of complement activation and leukocyte adherence as Nippostrongylus brasiliensis develops within the murine host. Infection and Immunity, 73 (11). pp. 7442-7449.

Belli, Sabina I., Walker, Robert A., and Flowers, Sarah A. (2005) Global protein expression analysis in apicomplexan parasites: current status. Proteomics, 5 (4). pp. 918-924.

Krishna, S.M., James, S., Kattoor, J., and Balaram, P. (2004) Human papilloma virus infection in Indian nasopharyngeal carcinomas in relation to the histology of tumour. Indian Journal of Patholology and Microbiology, 47 (2). pp. 181-185.

Johnson, Megan L., and Speare, Richard (2003) Survival of Batrachochytrium dendrobatidis in water: quarantine and disease control implications. Emerging Infectious Diseases, 9 (8). pp. 922-925.

Johnson, Megan L., Berger, Lee, Phillips, Lara, and Speare, Richard (2003) Fungicidal effects of chemical disinfectants, UV light, desiccation and heat on the amphibian chytrid, Batrachochytrium dendrobatidis. Diseases of Aquatic Organisms, 57 (3). pp. 255-260.

Buenviaje, G.N., Ladds, P.W., Hirst, R.G., Summers, P.M., and Millan, J.M. (1998) Attempted transmission of dermatophilosis in saltwater crocodiles (Crocodylus porosus). Australian Veterinary Journal, 76 (7). pp. 495-496.

Buenviaje, G.N., Ladds, P.W., and Martin, Y. (1998) Pathology of skin diseases in crocodiles. Australian Veterinary Journal, 76 (5). pp. 357-363.

Skerratt, L.F., Martin, R.W., and Handasyde, K. (1998) Sarcoptic mange in wombats. Australian Veterinary Journal, 76 (6). pp. 408-410.

Buenviaje, G.N., Hirst, R.G., Ladds, P.W., and Millan, J.M. (1997) Isolation of Dermatophilus sp from skin lesions in farmed saltwater crocodiles (Crocodylus porosus). Australian Veterinary Journal, 75 (5). pp. 365-367.

Hall, Roy A., Kay, Brian H., Burgess, Graham W., Clancy, Paula, and Fanning, Ian D. (1990) Epitope analysis of the envelope and non-structural glycoproteins of Murray Valley encephalitis virus. Journal of General Virology, 71 (12). pp. 2923-2930.

Webb, Leith, Goodwin, C.S., and Green, J. (1982) O antigen loss by semi-rough E. coli causing recurrent urinary infections, analysed by gel column filtration and gas-liquid chromatography. Pathology, 14 (1). pp. 17-24.

Book Chapter

Constantinoiu, Constantin (2014) Balantidioza / Balantidosis. In: Constantin, Nicolae, (ed.) Tratat de Medicinǎ Veterinarǎ / Compendium of Veterinary Medicine. Risoprint, Cluj-Napoca, Romania, pp. 347-352.

Constantinoiu, Constantin (2014) Cestodozele carnivorelor / Cestodes in dogs and cats. In: Constantin, Nicolae, (ed.) Tratat de Medicinǎ Veterinarǎ / Compendium of Veterinary Medicine. Risoprint, Cluj-Napoca, Romania, pp. 511-547.

Chapman, H. David, Barta, John R., Blake, Damer, Gruber, Arthur, Jenkins, Mark, Smith, Nicholas C., Suo, Xun, and Tomley, Fiona M. (2013) A selective review of advances in coccidiosis research. In: Rollinson, D., (ed.) Advances in Parasitology. Advances in Parasitology, 83 . Elsevier, London, UK, pp. 93-171.

Report

Rivera Posada, Jairo, and Pratchett, Morgan (2012) Pathogenesis in crown-of-thorns starfish (Acanthaster planci L): importance in outbreak dynamics and opportunities for controlling populations. Report. NERP, Tropical Environmental Hub, Townsville, QLD, Australia.

McAllister, Jane, Lazzaroni, Sharon, Barnes, Jodie, Ketheesan, Natkunam, and Proll, David (2009) Development of DNA vaccines against Burkholderia pseudomallei. Report. DSTO Defence Science and Technology Organisation, Fishermans Bend, VIC, Australia.

McAllister, Jane, Gauci, Penny, Lazzaroni, Sharon, Barnes, Jodie, Ketheesan, Natkunam, and Proll, David (2007) Assessment of a DNA vaccine encoding Burkholderia pseudomallei bacterioferritin. Report. Defence Science and Technology Organisation, Fishermans Bend, VIC, Australia.

Conference Item

Loiseau, Claire, Requena, Mary, Cazabat, Michelle, Carrere, Nicolas, Suc, Bertrand, Marchou, Bruno, Izopet, Jaques, and Delobel, Pierre (2015) T regulatory cells disrupt the CCL20-CCR6 axis driving Th17 homing to the gut. In: Abstracts from the 2015 Conference on Retroviruses and Opportunistic Infections. 274. p. 235. From: CROI 2015: Conference on Retroviruses and Opportunistic Infections, 23-26 February 2015, Seattle, WA, USA.

Elliman, J., and Owens, L. (2013) Teaching driving research: a case study using a novel microsporidium found in western king prawns off the Townsville coast. In: Australasian Scientific Conference on Aquatic Animal Health. From: Second Australasian Scientific Conference on Aquatic Animal Health, 8-12 July 2013, Cairns. (Unpublished)

Book

Pai, Saparna, Hickey, Michael J., and Weninger, Wolfgang (2017) Inflammation in the CNS: advancing the field using intravital imaging. Frontiers Research Topic eBook . Frontiers, Cham, Switzerland.

Thesis

Singh, Avishek (2019) Investigation of potential environmental reservoirs of mycobacterium ulcerans in North Queensland. Masters (Research) thesis, James Cook University.

McKnight, Donald T. (2019) Life finds a way: the recovery of frog populations from a chytridiomycosis outbreak. PhD thesis, James Cook University.

Sparrow, Leanne (2017) Key factors influencing the occurrence and frequency of ciguatera. PhD thesis, James Cook University.

Greenspan, Sasha Eden (2017) Thermal thresholds in the amphibian disease chytridiomycosis. PhD thesis, James Cook University.

Nicolet, Katia Jane (2017) Vectors and environmental drivers of coral disease dynamics on the Great Barrier Reef. PhD thesis, James Cook University.

Brannelly, Laura A. (2016) Investigating disease ecology, pathogenesis and population persistence of frogs threatened by chytridiomycosis to improve management outcomes. PhD thesis, James Cook University.

McNab, Angus (2015) Dynamics of the amphibian chytrid fungus (Batrachochytrium dendrobatidis) in isolated patches of lowland rainforest. Masters (Research) thesis, James Cook University.

Pollock, Frederic Joseph (2014) Understanding the drivers of white syndrome coral diseases on Indo-Pacific reefs. PhD thesis, James Cook University.

Williams, Natasha Louise (2014) The role of dendritic cells in the dissemination of Burkholderia pseudomallei infection. PhD thesis, James Cook University.

Sharman, Philippa Anne (2013) Identification of enzymes potentially involved in the formation of the oocyst wall of coccidian parasites. PhD thesis, James Cook University.

Bell, Sara Christiane (2012) The role of cutaneous bacteria in resistance of Australian tropical rainforest frogs to the amphibian chytrid fungus Batrachochytrium dendrobatidis. PhD thesis, James Cook University.

Daskin, Joshua H. (2011) Chytridiomycosis and symbiosis: context-dependency in amphibian disease and conservation. Masters (Research) thesis, James Cook University.

Sussman, Meir (2009) Coral disease pathogens of the Indo-Pacific Ocean. PhD thesis, James Cook University.

Lazzaroni, Sharon (2009) Immune responses in Burkholderia pseudomallei infection, relapse, reactivation and protection. Masters (Research) thesis, James Cook University.

Kenyon, Nicole (2008) Variable susceptibility to an emerging infectious disease, chytridiomycosis, in anurans. PhD thesis, James Cook University.

Salkeld, Daniel Joseph (2004) The ecology of a host-parasite relationship: haemogregarines and the eastern water skink, Eulamprus quoyii. PhD thesis, James Cook University.

Buenviaje, Gilbert (2000) Studies on skin diseases of crocodiles. PhD thesis, James Cook University.

Ariel, Ellen (1997) Pathology and serological aspects of Bohle iridovirus infections in six selected water-associated reptiles in North Queensland. PhD thesis, James Cook University.